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ONTOLOGY REPORT - ANNOTATIONS


Term:GABAergic neuron differentiation
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Accession:GO:0097154 term browser browse the term
Definition:The process in which a neuroblast acquires the specialized structural and functional features of a GABAergic neuron.


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GABAergic neuron differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata2 GATA binding protein 2 ISO MGI:4818492 (MGI:5439194|PMID:22991444) RGD PMID:22991444 MGI:5439194 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Inhba inhibin subunit beta A ISO (PMID:25804741) RGD PMID:25804741 NCBI chr17:51,894,869...51,919,998
Ensembl chr17:51,898,217...51,912,496
JBrowse link
G Ulk4 unc-51 like kinase 4 ISO MGI:4362969 (MGI:6120659|PMID:29391390) RGD PMID:29391390 MGI:6120659 NCBI chr 8:129,631,003...129,919,080
Ensembl chr 8:129,632,149...129,919,120
JBrowse link
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rac1 Rac family small GTPase 1 ISO MGI:2180784 (MGI:5569596|PMID:23258346) RGD PMID:23258346 MGI:5569596 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rac3 Rac family small GTPase 3 ISO MGI:97845 (MGI:5569596|PMID:23258346) RGD PMID:23258346 MGI:5569596 NCBI chr10:109,903,920...109,906,596
Ensembl chr10:109,904,259...109,906,232
JBrowse link
cerebral cortex GABAergic interneuron differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO (PMID:12050665) RGD PMID:12050665 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Dlx1 distal-less homeobox 1 ISO MGI:94902 (MGI:3574146|PMID:15028753) RGD PMID:15028753 MGI:3574146 NCBI chr 3:58,164,931...58,169,521
Ensembl chr 3:58,164,931...58,169,521
JBrowse link
G Dlx2 distal-less homeobox 2 ISO MGI:94901 (MGI:3574146|PMID:15028753) RGD PMID:15028753 MGI:3574146 NCBI chr 3:58,180,088...58,181,971
Ensembl chr 3:58,180,088...58,181,971
JBrowse link
G Nkx2-1 NK2 homeobox 1 IEA
ISO
GO_REF:0000107
MGI:1857494|MGI:3653645 (MGI:3574146|PMID:15028753), (MGI:3834782|PMID:18786356)
Ensembl
RGD
PMID:15028753, PMID:18786356 GO_REF:0000107, MGI:3574146, MGI:3834782 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 IEA
ISO
GO_REF:0000107
MGI:94902 (MGI:3775335|PMID:17678855)
Ensembl
RGD
PMID:17678855 GO_REF:0000107, MGI:3775335 NCBI chr 3:58,164,931...58,169,521
Ensembl chr 3:58,164,931...58,169,521
JBrowse link
G Dlx2 distal-less homeobox 2 IEA
ISO
GO_REF:0000107
MGI:94901 (MGI:3775335|PMID:17678855)
Ensembl
RGD
PMID:17678855 GO_REF:0000107, MGI:3775335 NCBI chr 3:58,180,088...58,181,971
Ensembl chr 3:58,180,088...58,181,971
JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox IEA
ISO
GO_REF:0000107
MGI:2679972 (MGI:3709215|PMID:17460091)
Ensembl
RGD
PMID:17460091 GO_REF:0000107, MGI:3709215 NCBI chr  X:62,363,757...62,376,139
Ensembl chr  X:62,363,757...62,376,143
JBrowse link
G Cntn2 contactin 2 IEA
ISO
GO_REF:0000107
(MGI:2155629|PMID:11714688)
Ensembl
RGD
PMID:11714688 GO_REF:0000107, MGI:2155629 NCBI chr13:49,280,913...49,314,061
Ensembl chr13:49,285,310...49,313,940
JBrowse link
G Drd1 dopamine receptor D1 IEA
ISO
GO_REF:0000107
MGI:1857875 (MGI:3709536|PMID:17409246)
Ensembl
RGD
PMID:17409246 GO_REF:0000107, MGI:3709536 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Drd2 dopamine receptor D2 ISO MGI:1857875 (MGI:3709536|PMID:17409246) RGD PMID:17409246 MGI:3709536 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Fezf2 Fez family zinc finger 2 ISO MGI:3046867 (MGI:5140686|PMID:21338885) RGD PMID:21338885 MGI:5140686 NCBI chr15:12,825,333...12,831,496
Ensembl chr15:12,827,707...12,831,496
JBrowse link
G Lhx6 LIM homeobox 6 ISO MGI:3702518 (MGI:3702257|PMID:17376969) RGD PMID:17376969 MGI:3702257 NCBI chr 3:15,409,349...15,433,504
Ensembl chr 3:15,411,939...15,433,252
JBrowse link
GABAergic neuron differentiation in basal ganglia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helt helt bHLH transcription factor ISO MGI:3703237 (MGI:3702791|PMID:16968817) RGD PMID:16968817 MGI:3702791 NCBI chr16:49,185,560...49,187,293
Ensembl chr16:49,185,560...49,187,293
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular developmental process 4457
        cell differentiation 4362
          neuron differentiation 1614
            GABAergic neuron differentiation 16
              GABAergic neuron differentiation in basal ganglia 1
              Lugaro cell differentiation 0
              cerebellar Golgi cell differentiation 0
              cerebral cortex GABAergic interneuron differentiation + 12
Path 2
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure development 6268
        multicellular organism development 5743
          system development 5279
            nervous system development 2719
              neurogenesis 1936
                generation of neurons 1780
                  neuron differentiation 1614
                    GABAergic neuron differentiation 16
                      GABAergic neuron differentiation in basal ganglia 1
                      Lugaro cell differentiation 0
                      cerebellar Golgi cell differentiation 0
                      cerebral cortex GABAergic interneuron differentiation + 12
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.