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ONTOLOGY REPORT - ANNOTATIONS

Term:GABAergic neuron differentiation
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Accession:GO:0097154 term browser browse the term
Definition:The process in which a neuroblast acquires the specialized structural and functional features of a GABAergic neuron.


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GABAergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15071116) Ensembl
MGI		 PMID:15071116 GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:17092954) MGI PMID:17092954
G DLX1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11163262) Ensembl
MGI		 PMID:11163262 GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:11163262) MGI PMID:11163262 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
G FEZF2 FEZ family zinc finger 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:24997765) Ensembl
MGI		 PMID:24997765 GO_REF:0000107 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282 		JBrowse link
G GATA2 GATA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22991444) Ensembl
MGI		 PMID:22991444 GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991 		JBrowse link
G GSX2 GS homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11060228) Ensembl
MGI		 PMID:11060228 GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
G HELT helt bHLH transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15071116) Ensembl
MGI		 PMID:15071116 GO_REF:0000107 NCBI chr16:45,564,986...45,567,225
Ensembl chr16:45,565,131...45,566,884 		JBrowse link
G INHBA inhibin subunit beta A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:8,272,978...8,288,432
Ensembl chr18:8,272,872...8,283,794 		JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11163262) Ensembl
MGI		 PMID:11163262 GO_REF:0000107
G PRDM13 PR/SET domain 13 involved_in ISO (MGI:6836711|PMID:34730112) UniProt PMID:34730112 MGI:6836711 NCBI chr12:57,803,068...57,811,592 JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of ISO (PMID:18024993) MGI PMID:18024993 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521 		JBrowse link
G TLX3 T cell leukemia homeobox 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16234809) Ensembl
MGI		 PMID:16234809 GO_REF:0000107 NCBI chr 4:40,816,351...40,818,582
Ensembl chr 4:40,816,467...40,818,723 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:29391390) MGI PMID:29391390 NCBI chr23:10,578,391...11,176,543
Ensembl chr23:10,578,429...11,176,545 		JBrowse link
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNA2 cholinergic receptor nicotinic alpha 2 subunit part_of ISO RGD PMID:17046198 RGD:152995358 NCBI chr25:30,117,384...30,137,223
Ensembl chr25:30,117,239...30,135,599 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:23258346) MGI PMID:23258346 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G RAC3 Rac family small GTPase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23258346) Ensembl
MGI		 PMID:23258346 GO_REF:0000107 NCBI chr 9:293,260...295,990 JBrowse link
cerebral cortex GABAergic interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G DLX1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15028753) Ensembl
MGI		 PMID:15028753 GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:15028753) MGI PMID:15028753 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15028753)
(PMID:18786356)		 Ensembl
MGI		 PMID:15028753 PMID:18786356 GO_REF:0000107
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17678855) Ensembl
MGI		 PMID:17678855 GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:17678855) MGI PMID:17678855 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17460091) Ensembl
MGI		 PMID:17460091 GO_REF:0000107 NCBI chr  X:20,545,346...20,556,206
Ensembl chr  X:20,545,346...20,556,206 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17409246) MGI PMID:17409246 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287 		JBrowse link
G DRD2 dopamine receptor D2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17409246) Ensembl
MGI		 PMID:17409246 GO_REF:0000107 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241 		JBrowse link
G FEZF2 FEZ family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21338885) Ensembl
MGI		 PMID:21338885 GO_REF:0000107 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:17376969) MGI PMID:17376969 NCBI chr 9:60,348,529...60,374,037
Ensembl chr 9:60,348,335...60,374,024 		JBrowse link
GABAergic neuron differentiation in basal ganglia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HELT helt bHLH transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16968817) Ensembl
MGI		 PMID:16968817 GO_REF:0000107 NCBI chr16:45,564,986...45,567,225
Ensembl chr16:45,565,131...45,566,884 		JBrowse link
striatal medium spiny neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18199763) Ensembl
MGI		 PMID:18199763 GO_REF:0000107 NCBI chr 8:67,622,592...67,713,922
Ensembl chr 8:67,622,708...67,714,404 		JBrowse link
G INHBA inhibin subunit beta A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:8,272,978...8,288,432
Ensembl chr18:8,272,872...8,283,794 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
G ZSWIM6 zinc finger SWIM-type containing 6 involved_in ISO (MGI:6140923|PMID:28433741) UniProt PMID:28433741 MGI:6140923 NCBI chr 2:47,954,786...48,064,489
Ensembl chr 2:47,991,716...48,063,680 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17878
    cellular process 16920
      cellular developmental process 4609
        cell differentiation 4608
          neuron differentiation 1714
            GABAergic neuron differentiation 24
              GABAergic neuron differentiation in basal ganglia 1
              Lugaro cell differentiation 0
              cerebellar Golgi cell differentiation 0
              cerebral cortex GABAergic interneuron differentiation + 12
              striatal medium spiny neuron differentiation 4
Path 2
Term Annotations click to browse term
  biological_process 17878
    developmental process 6855
      anatomical structure development 6433
        multicellular organism development 5182
          system development 4509
            nervous system development 2787
              neurogenesis 2079
                generation of neurons 1795
                  neuron differentiation 1714
                    GABAergic neuron differentiation 24
                      GABAergic neuron differentiation in basal ganglia 1
                      Lugaro cell differentiation 0
                      cerebellar Golgi cell differentiation 0
                      cerebral cortex GABAergic interneuron differentiation + 12
                      striatal medium spiny neuron differentiation 4
paths to the root