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ONTOLOGY REPORT - ANNOTATIONS

Term:GABAergic neuron differentiation
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Accession:GO:0097154 term browser browse the term
Definition:The process in which a neuroblast acquires the specialized structural and functional features of a GABAergic neuron.


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GABAergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO
IEA 		MGI:3040955 (PMID:15071116)
GO_REF:0000107 		RGD
Ensembl		 PMID:15071116 GO_REF:0000107 NCBI chr 7:23,790,642...23,793,509
Ensembl chr 7:23,790,360...23,798,231 		JBrowse link
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:3707409 (PMID:17092954) RGD PMID:17092954 NCBI chr 2:102,402,622...102,405,732
Ensembl chr 2:102,400,164...102,420,508 		JBrowse link
G Dlx1 distal-less homeobox 1 acts_upstream_of_or_within ISO
IEA 		MGI:94902 (PMID:11163262)
GO_REF:0000107 		RGD
Ensembl		 PMID:11163262 GO_REF:0000107 NCBI chr 3:76,763,864...76,768,454
Ensembl chr 3:76,763,500...76,768,447 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within ISO
IEA 		MGI:94901 (PMID:11163262)
GO_REF:0000107 		RGD
Ensembl		 PMID:11163262 GO_REF:0000107 NCBI chr 3:76,777,912...76,781,255
Ensembl chr 3:76,777,912...76,781,255 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of ISO
IEA 		(PMID:24997765)
GO_REF:0000107 		RGD
Ensembl		 PMID:24997765 GO_REF:0000107 NCBI chr15:15,199,045...15,207,982
Ensembl chr15:15,204,193...15,207,982 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO
IEA 		MGI:4818492 (PMID:22991444)
GO_REF:0000107 		RGD
Ensembl		 PMID:22991444 GO_REF:0000107 NCBI chr 4:122,211,501...122,225,058
Ensembl chr 4:122,211,829...122,225,055 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO
IEA 		MGI:2150162 (PMID:11060228)
GO_REF:0000107 		RGD
Ensembl		 PMID:11060228 GO_REF:0000107 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,477,968...33,480,320 		JBrowse link
G Helt helt bHLH transcription factor acts_upstream_of_or_within ISO
IEA 		MGI:96919 (PMID:15071116)
GO_REF:0000107 		RGD
Ensembl		 PMID:15071116 GO_REF:0000107 NCBI chr16:45,991,227...45,993,045
Ensembl chr16:52,723,739...52,726,162 		JBrowse link
G Inhba inhibin subunit beta A involved_in ISO
IEA 		(PMID:25804741)
GO_REF:0000107 		RGD
Ensembl		 PMID:25804741 GO_REF:0000107 NCBI chr17:53,787,159...53,810,942
Ensembl chr17:53,791,444...53,804,508 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO
IEA 		MGI:1857494 (PMID:11163262)
GO_REF:0000107 		RGD
Ensembl		 PMID:11163262 GO_REF:0000107 NCBI chr 6:79,731,677...79,735,952
Ensembl chr 6:79,731,677...79,736,441 		JBrowse link
G Prdm13 PR/SET domain 13 involved_in ISO (PMID:34730112) RGD PMID:34730112 NCBI chr 5:35,220,815...35,232,866
Ensembl chr 5:40,017,607...40,038,207 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of ISO MGI:2388379 (PMID:18024993) RGD PMID:18024993 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:34,181,078...34,196,278 		JBrowse link
G Tlx3 T-cell leukemia, homeobox 3 acts_upstream_of ISO
IEA 		MGI:104867 (PMID:16234809)
GO_REF:0000107 		RGD
Ensembl		 PMID:16234809 GO_REF:0000107 NCBI chr10:17,789,706...17,792,207
Ensembl chr10:18,293,932...18,296,773 		JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO MGI:4362969 (PMID:29391390) RGD PMID:29391390 NCBI chr 8:129,548,431...129,843,555
Ensembl chr 8:129,548,431...129,843,501 		JBrowse link
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit part_of IEP RGD PMID:17046198 RGD:152995358 NCBI chr15:40,342,317...40,358,601
Ensembl chr15:44,517,862...44,534,144 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2180784 (PMID:23258346) RGD PMID:23258346 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:16,128,649...16,172,109 		JBrowse link
G Rac3 Rac family small GTPase 3 acts_upstream_of_or_within ISO
IEA 		MGI:97845 (PMID:23258346)
GO_REF:0000107 		RGD
Ensembl		 PMID:23258346 GO_REF:0000107 NCBI chr10:106,501,133...106,503,569
Ensembl chr10:106,501,135...106,503,569 		JBrowse link
cerebral cortex GABAergic interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 involved_in ISO
IEA 		(PMID:12050665)
GO_REF:0000107 		RGD
Ensembl		 PMID:12050665 GO_REF:0000107 NCBI chr 7:23,790,642...23,793,509
Ensembl chr 7:23,790,360...23,798,231 		JBrowse link
G Dlx1 distal-less homeobox 1 acts_upstream_of_or_within ISO
IEA 		MGI:94902 (PMID:15028753)
GO_REF:0000107 		RGD
Ensembl		 PMID:15028753 GO_REF:0000107 NCBI chr 3:76,763,864...76,768,454
Ensembl chr 3:76,763,500...76,768,447 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within ISO
IEA 		MGI:94901 (PMID:15028753)
GO_REF:0000107 		RGD
Ensembl		 PMID:15028753 GO_REF:0000107 NCBI chr 3:76,777,912...76,781,255
Ensembl chr 3:76,777,912...76,781,255 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO
IEA 		MGI:1857494|MGI:3653645 (PMID:15028753), (PMID:18786356)
GO_REF:0000107 		RGD
Ensembl		 PMID:15028753 PMID:18786356 GO_REF:0000107 NCBI chr 6:79,731,677...79,735,952
Ensembl chr 6:79,731,677...79,736,441 		JBrowse link
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 acts_upstream_of_or_within ISO
IEA 		MGI:94902 (PMID:17678855)
GO_REF:0000107 		RGD
Ensembl		 PMID:17678855 GO_REF:0000107 NCBI chr 3:76,763,864...76,768,454
Ensembl chr 3:76,763,500...76,768,447 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within ISO
IEA 		MGI:94901 (PMID:17678855)
GO_REF:0000107 		RGD
Ensembl		 PMID:17678855 GO_REF:0000107 NCBI chr 3:76,777,912...76,781,255
Ensembl chr 3:76,777,912...76,781,255 		JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within ISO
IEA 		MGI:2679972 (PMID:17460091)
GO_REF:0000107 		RGD
Ensembl		 PMID:17460091 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:62,010,097...62,022,002 		JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within ISO
IEA 		(PMID:11714688)
GO_REF:0000107 		RGD
Ensembl		 PMID:11714688 GO_REF:0000107 NCBI chr13:46,497,269...46,528,112
Ensembl chr13:46,499,396...46,528,027 		JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO
IEA 		MGI:1857875 (PMID:17409246)
GO_REF:0000107 		RGD
Ensembl		 PMID:17409246 GO_REF:0000107 NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,545,111...10,567,166 		JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO
IEA 		MGI:1857875 (PMID:17409246)
GO_REF:0000107 		RGD
Ensembl		 PMID:17409246 GO_REF:0000107 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:58,605,403...58,669,339 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO
IEA 		MGI:3046867 (PMID:21338885)
GO_REF:0000107 		RGD
Ensembl		 PMID:21338885 GO_REF:0000107 NCBI chr15:15,199,045...15,207,982
Ensembl chr15:15,204,193...15,207,982 		JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:3702518 (PMID:17376969) RGD PMID:17376969 NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:39,830,990...39,853,559 		JBrowse link
GABAergic neuron differentiation in basal ganglia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helt helt bHLH transcription factor acts_upstream_of_or_within ISO
IEA 		MGI:3703237 (PMID:16968817)
GO_REF:0000107 		RGD
Ensembl		 PMID:16968817 GO_REF:0000107 NCBI chr16:45,991,227...45,993,045
Ensembl chr16:52,723,739...52,726,162 		JBrowse link
striatal medium spiny neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO
IEA 		MGI:2663971 (PMID:18199763)
GO_REF:0000107 		RGD
Ensembl		 PMID:18199763 GO_REF:0000107 NCBI chr 6:132,598,968...132,692,123
Ensembl chr 6:132,598,968...132,691,301 		JBrowse link
G Inhba inhibin subunit beta A involved_in ISO
IEA 		(PMID:25804741)
GO_REF:0000107 		RGD
Ensembl		 PMID:25804741 GO_REF:0000107 NCBI chr17:53,787,159...53,810,942
Ensembl chr17:53,791,444...53,804,508 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:21423165)
GO_REF:0000024 		Ensembl
RGD
BHF-UCL		 PMID:21423165 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:122,448,323...122,518,623
Ensembl chr 7:122,448,323...122,510,410 		JBrowse link
G Zswim6 zinc finger, SWIM-type containing 6 involved_in ISO (PMID:28433741) RGD PMID:28433741 NCBI chr 2:40,944,617...41,112,340
Ensembl chr 2:40,946,435...41,112,519 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20668
    cellular process 19605
      cellular developmental process 4967
        cell differentiation 4966
          neuron differentiation 1772
            GABAergic neuron differentiation 25
              GABAergic neuron differentiation in basal ganglia 1
              Lugaro cell differentiation 0
              cerebellar Golgi cell differentiation 0
              cerebral cortex GABAergic interneuron differentiation + 13
              striatal medium spiny neuron differentiation 4
Path 2
Term Annotations click to browse term
  biological_process 20668
    developmental process 7294
      anatomical structure development 6777
        multicellular organism development 5422
          system development 4701
            nervous system development 2936
              neurogenesis 2166
                generation of neurons 1853
                  neuron differentiation 1772
                    GABAergic neuron differentiation 25
                      GABAergic neuron differentiation in basal ganglia 1
                      Lugaro cell differentiation 0
                      cerebellar Golgi cell differentiation 0
                      cerebral cortex GABAergic interneuron differentiation + 13
                      striatal medium spiny neuron differentiation 4
paths to the root