Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:postsynaptic density protein 95 clustering
go back to main search page
Accession:GO:0097119 term browser browse the term
Definition:The clustering process in which postsynaptic density protein 95 (PSD-95) molecules are localized to distinct domains in the cell membrane. PSD-95 is mostly located in the post synaptic density of neurons, and is involved in anchoring synaptic proteins.
Synonyms:exact_synonym: Dlg4 clustering;   PSD-95 clustering;   post-synaptic density protein 95 clustering


show annotations for term's descendants           Sort by:
postsynaptic density protein 95 clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cit citron rho-interacting serine/threonine kinase IDA RGD PMID:9870942 RGD:70684 NCBI chr12:40,603,073...40,764,846
Ensembl chr12:40,605,563...40,763,860 		JBrowse link
G Lrrc4 leucine rich repeat containing 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:16980967)		 GO_Central
RGD		 PMID:16980967 GO_REF:0000033 NCBI chr 4:57,433,518...57,437,114
Ensembl chr 4:57,433,428...57,437,911 		JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
ISO
IEA
ISS
IMP		 PMID:19450252
(PMID:12796785), (PMID:15620359), (PMID:20869594)
GO_REF:0000107
GO_REF:0000024
PMID:12930820		 RGD
Ensembl
BHF-UCL		 PMID:12796785 PMID:15620359 PMID:20869594 PMID:19450252 PMID:19450252 More... GO_REF:0000024 GO_REF:0000107, RGD:8553605, RGD:8553605, RGD:8554754 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464 		JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:15620359)
GO_REF:0000024		 Ensembl
RGD
BHF-UCL		 PMID:15620359 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,544,461...54,557,854
Ensembl chr10:54,544,588...54,558,434 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:21424692)
(PMID:15620359)
GO_REF:0000107		 BHF-UCL
RGD
Ensembl		 PMID:15620359 PMID:21424692 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710 		JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:21424692)
GO_REF:0000107		 BHF-UCL
RGD
Ensembl		 PMID:21424692 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:203,726,420...203,842,301
Ensembl chr 1:203,735,753...203,842,297 		JBrowse link
G Reln reelin involved_in IEA
ISO		 GO_REF:0000107
(PMID:21664258)		 Ensembl
RGD		 PMID:21664258 GO_REF:0000107 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
regulation of postsynaptic density protein 95 clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:20534458)		 Ensembl
RGD		 PMID:20534458 GO_REF:0000107 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167 		JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain involved_in IMP PMID:10570482 UniProt PMID:10570482 RGD:8554363 NCBI chr 6:7,581,428...7,589,384
Ensembl chr 6:7,580,703...7,589,399 		JBrowse link
G Dbn1 drebrin 1 IMP RGD PMID:12878700 RGD:10398728 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984 		JBrowse link
G Slc30a1 solute carrier family 30 member 1 IMP RGD PMID:25319628 RGD:11057402 NCBI chr13:103,491,037...103,494,910
Ensembl chr13:103,491,037...103,494,910 		JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 IMP RGD PMID:24117785 RGD:8554267 NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20537
    cellular process 19526
      cellular localization 3677
        localization within membrane 763
          protein localization to membrane 668
            postsynaptic density protein 95 clustering 12
              regulation of postsynaptic density protein 95 clustering 5
Path 2
Term Annotations click to browse term
  biological_process 20537
    cellular process 19526
      cellular component organization or biogenesis 7187
        cellular component organization 6903
          cell junction organization 985
            synapse organization 705
              postsynapse organization 336
                postsynaptic specialization organization 85
                  postsynaptic density organization 68
                    postsynaptic density protein 95 clustering 12
                      regulation of postsynaptic density protein 95 clustering 5
paths to the root