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ONTOLOGY REPORT - ANNOTATIONS


Term:postsynaptic density protein 95 clustering
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Accession:GO:0097119 term browser browse the term
Definition:The clustering process in which postsynaptic density protein 95 (PSD-95) molecules are localized to distinct domains in the cell membrane. PSD-95 is mostly located in the post synaptic density of neurons, and is involved in anchoring synaptic proteins.
Synonyms:exact_synonym: Dlg4 clustering;   PSD-95 clustering;   post-synaptic density protein 95 clustering


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postsynaptic density protein 95 clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrc4 leucine rich repeat containing 4 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3664681|PMID:16980967)
PMID:21873635
RGD PMID:16980967, PMID:21873635 MGI:3664681, RGD:13792537 NCBI chr 4:56,110,658...56,114,254
Ensembl chr 4:56,110,658...56,114,254
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
ISO
ISS
IMP
PMID:19450252
(MGI:2665153|PMID:12796785), (MGI:5284797|PMID:15620359), (MGI:5306551|PMID:20869594)
GO_REF:0000024
PMID:12930820
RGD
BHF-UCL
PMID:12796785 PMID:15620359 PMID:20869594, PMID:19450252, PMID:19450252, PMID:12930820 GO_REF:0000024 MGI:2665153 MGI:5284797 MGI:5306551, RGD:8553605, RGD:8553605, RGD:8554754 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5284797|PMID:15620359)
GO_REF:0000024
Ensembl
RGD
BHF-UCL
PMID:15620359 GO_REF:0000024 GO_REF:0000107 MGI:5284797 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:15620359 PMID:21424692 GO_REF:0000024 MGI:5284797 MGI:5285129 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5285129|PMID:21424692)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21424692 GO_REF:0000024 GO_REF:0000107 MGI:5285129 NCBI chr 1:221,792,191...221,908,047
Ensembl chr 1:221,792,221...221,908,049
JBrowse link
G Reln reelin involved_in IEA
ISO
GO_REF:0000107
(MGI:5286805|PMID:21664258)
Ensembl
RGD
PMID:21664258 GO_REF:0000107 MGI:5286805 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
regulation of postsynaptic density protein 95 clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:4457945|PMID:20534458)
Ensembl
RGD
PMID:20534458 GO_REF:0000107 MGI:4457945 NCBI chr18:8,146,971...8,366,037
Ensembl chr18:8,146,971...8,360,684
JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain involved_in IMP PMID:10570482 UniProt PMID:10570482 RGD:8554363 NCBI chr 6:10,594,147...10,602,103
Ensembl chr 6:10,594,122...10,602,085
JBrowse link
G Dbn1 drebrin 1 IMP RGD PMID:12878700 RGD:10398728 NCBI chr17:9,679,511...9,693,878
Ensembl chr17:9,679,628...9,693,820
JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 IMP RGD PMID:24117785 RGD:8554267 NCBI chr 3:162,480,766...162,594,145
Ensembl chr 3:162,480,804...162,581,610
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    localization 6442
      cellular localization 2990
        localization within membrane 689
          protein localization to membrane 619
            postsynaptic density protein 95 clustering 10
              regulation of postsynaptic density protein 95 clustering 4
Path 2
Term Annotations click to browse term
  biological_process 19491
    cellular process 18344
      cellular component organization or biogenesis 6721
        cellular component organization 6481
          cell junction organization 798
            synapse organization 510
              postsynapse organization 221
                postsynaptic specialization organization 50
                  postsynaptic density organization 44
                    postsynaptic density protein 95 clustering 10
                      regulation of postsynaptic density protein 95 clustering 4
paths to the root