Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:dendritic spine maintenance
go back to main search page
Accession:GO:0097062 term browser browse the term
Definition:The organization process that preserves a dendritic spine in a stable functional or structural state. A dendritic spine is a specialized protrusion from a neuronal dendrite and is involved in synaptic transmission.


show annotations for term's descendants           Sort by:
 
dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:99695 (MGI:5469894|PMID:23365224) RGD PMID:23365224 MGI:5469894 NCBI chr13:68,673,702...68,839,742
Ensembl chr13:68,673,722...68,839,742
JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO MGI:2177650|MGI:5570192 (MGI:5546446|PMID:23936366) RGD PMID:23936366 MGI:5546446 NCBI chr 3:77,491,195...77,593,300
Ensembl chr 3:77,491,276...77,593,264
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (MGI:6381243|PMID:31141683) RGD PMID:31141683 MGI:6381243 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Cttn cortactin acts_upstream_of_or_within ISO MGI:87860 (MGI:5469894|PMID:23365224) RGD PMID:23365224 MGI:5469894 NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164
JBrowse link
G Igf1r insulin-like growth factor 1 receptor involved_in IGI PMID:19406747 ARUK-UCL PMID:19406747 RGD:13210538 NCBI chr 1:121,549,839...121,838,545
Ensembl chr 1:121,550,743...121,831,777
JBrowse link
G Insr insulin receptor involved_in IGI PMID:19406747 ARUK-UCL PMID:19406747 RGD:13210538 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
JBrowse link
G Itga3 integrin subunit alpha 3 acts_upstream_of_or_within ISO MGI:1857792|MGI:87860 (MGI:5488992|PMID:23595732) RGD PMID:23595732 MGI:5488992 NCBI chr10:79,990,160...80,022,206
Ensembl chr10:79,990,161...80,022,118
JBrowse link
G Itpka inositol-trisphosphate 3-kinase A acts_upstream_of_or_within IMP PMID:19890013 MGI PMID:19890013 RGD:8553536 NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600
JBrowse link
G Mtmr2 myotubularin related protein 2 involved_in IMP PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chr 8:10,617,993...10,670,724
Ensembl chr 8:10,617,993...10,668,172
JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in IBA
IMP
PMID:21873635
PMID:18297063
GO_Central
UniProt
PMID:21873635 PMID:18297063 RGD:13792537, RGD:8554748 NCBI chr 7:110,796,623...110,816,850
Ensembl chr 7:110,797,117...110,816,848
JBrowse link
G Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4125076 (MGI:4845797|PMID:21068316)
Ensembl
RGD
PMID:21068316 GO_REF:0000107 MGI:4845797 NCBI chr 3:44,099,387...44,335,478
Ensembl chr 3:44,134,016...44,331,627
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6393391|PMID:31980586) RGD PMID:31980586 MGI:6393391 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
negative regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E acts_upstream_of_or_within ISO (PMID:24328732) RGD PMID:24328732 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Cfl1 cofilin 1 involved_in IMP
NAS
PMID:17360908 RGD
ARUK-UCL
PMID:23974706 PMID:17360908 RGD:11570553, RGD:12793018 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in ISO UniProtKB:P04925|UniProtKB:Q01097 (MGI:5447900|PMID:22820466) RGD PMID:22820466 MGI:5447900 NCBI chr20:42,767,733...42,960,903
Ensembl chr20:42,766,369...42,959,911
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B involved_in ISO UniProtKB:P04925|UniProtKB:P39688 (MGI:5447900|PMID:22820466) RGD PMID:22820466 MGI:5447900 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Prnp prion protein involved_in ISO ComplexPortal:CPX-1134|UniProtKB:P39688|UniProtKB:Q01097 (MGI:5447900|PMID:22820466), (MGI:5515653|PMID:24012003) RGD PMID:22820466 PMID:24012003 MGI:5447900 MGI:5515653 NCBI chr 3:119,186,073...119,201,513
Ensembl chr 3:119,177,485...119,203,937
JBrowse link
positive regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:24328732)
Ensembl
RGD
PMID:24328732 GO_REF:0000107 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 involved_in IGI PMID:17360908 ARUK-UCL PMID:17360908 RGD:12793018 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Ins2 insulin 2 involved_in ISO ComplexPortal:CPX-1134 (PMID:19188609) RGD PMID:19188609 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Zfp804a zinc finger protein 804A involved_in IMP PMID:27837918 UniProt PMID:27837918 RGD:13210564 NCBI chr 3:67,033,481...67,267,769
Ensembl chr 3:67,034,170...67,263,607
JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 IMP RGD PMID:24117785 RGD:8554267 NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463
JBrowse link
regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17b abhydrolase domain containing 17B, depalmitoylase involved_in ISO (MGI:6094388|PMID:27307232) RGD PMID:27307232 MGI:6094388 NCBI chr 1:219,198,294...219,232,733
Ensembl chr 1:219,198,471...219,231,933
JBrowse link
G App amyloid beta precursor protein involved_in ISO ComplexPortal:CPX-1134 (PMID:23921129) RGD PMID:23921129 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb involved_in ISO UniProtKB:P05067:PRO_0000000092 (PMID:23921129)
(MGI:5514474|PMID:23921129)
RGD PMID:23921129 MGI:5514474 NCBI chr13:83,191,253...83,207,776
Ensembl chr13:83,193,163...83,207,778
JBrowse link
G Homer1 homer scaffold protein 1 involved_in IMP
ISS
PMID:19345194
GO_REF:0000024
UniProt PMID:19345194 GO_REF:0000024, RGD:8553291 NCBI chr 2:24,542,777...24,645,715
Ensembl chr 2:24,543,093...24,644,785
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:26618722) RGD PMID:26618722 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular component organization or biogenesis 6481
        cellular component organization 6235
          cellular component maintenance 85
            dendritic spine maintenance 26
              negative regulation of dendritic spine maintenance 5
              positive regulation of dendritic spine maintenance 5
              regulation of dendritic spine maintenance + 14
Path 2
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular component organization or biogenesis 6481
        cellular component organization 6235
          cell junction organization 798
            synapse organization 512
              postsynapse organization 223
                dendritic spine organization 103
                  dendritic spine maintenance 26
                    negative regulation of dendritic spine maintenance 5
                    positive regulation of dendritic spine maintenance 5
                    regulation of dendritic spine maintenance + 14
paths to the root