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ONTOLOGY REPORT - ANNOTATIONS

Term:perinuclear endoplasmic reticulum
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Accession:GO:0097038 term browser browse the term
Definition:The portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus. The lumen of the perinuclear endoplasmic reticulum is contiguous with the nuclear envelope lumen (also called perinuclear space), the region between the inner and outer nuclear membranes.
Synonyms:exact_synonym: perinuclear ER


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perinuclear endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase ISO RGD RGD:11557982 RGD:150520179 NCBI chr12:19,407,359...19,413,713
Ensembl chr12:19,407,360...19,413,651 		JBrowse link
G Adam10 ADAM metallopeptidase domain 10 located_in ISO (PMID:23091066) RGD PMID:23091066 NCBI chr 8:71,346,008...71,477,889
Ensembl chr 8:71,345,837...71,477,889 		JBrowse link
G Bcap31 B-cell receptor-associated protein 31 located_in ISO (PMID:25854864) RGD PMID:25854864 NCBI chr  X:151,397,567...151,429,666
Ensembl chr  X:151,397,576...151,428,506 		JBrowse link
G Capn2 calpain 2 located_in ISO (PMID:14559243) RGD PMID:14559243 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969 		JBrowse link
G Cisd2 CDGSH iron sulfur domain 2 located_in ISO (PMID:17376863) RGD PMID:17376863 NCBI chr 2:223,828,937...223,853,768
Ensembl chr 2:223,828,937...223,868,946 		JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 IDA RGD PMID:23842743 RGD:13515084 NCBI chr 4:65,907,570...66,112,078
Ensembl chr 4:65,907,655...66,023,763 		JBrowse link
G Cyba cytochrome b-245 alpha chain colocalizes_with IDA RGD PMID:10938010 RGD:632513 NCBI chr19:50,487,598...50,495,669
Ensembl chr19:50,487,597...50,495,721 		JBrowse link
G Cybb cytochrome b-245 beta chain colocalizes_with IDA RGD PMID:10938010 RGD:632513 NCBI chr  X:13,360,583...13,392,517
Ensembl chr  X:13,359,430...13,392,586 		JBrowse link
G Dbi diazepam binding inhibitor located_in ISO (PMID:21698759) RGD PMID:21698759 NCBI chr13:31,241,466...31,249,853
Ensembl chr13:31,206,988...31,268,693 		JBrowse link
G Dst dystonin located_in ISO (MGI:3612006|PMID:16289082) RGD PMID:16289082 MGI:3612006 NCBI chr 9:36,135,657...36,529,617
Ensembl chr 9:36,135,284...36,529,615 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase located_in IDA PMID:27525436 ARUK-UCL PMID:27525436 RGD:13601987 NCBI chr20:42,767,733...42,960,903
Ensembl chr20:42,766,369...42,959,911 		JBrowse link
G Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 part_of ISO (MGI:5619476|PMID:18667693) RGD PMID:18667693 MGI:5619476 NCBI chr 1:153,679,718...153,761,452
Ensembl chr 1:153,679,718...153,761,446 		JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 IDA RGD PMID:12967630 RGD:7207200 NCBI chr 4:49,775,812...50,277,746
Ensembl chr 4:49,776,246...50,277,728 		JBrowse link
G Kcnd3 potassium voltage-gated channel subfamily D member 3 IDA RGD PMID:12967630 RGD:7207200 NCBI chr 2:192,937,950...193,155,345
Ensembl chr 2:192,937,950...193,155,345 		JBrowse link
G Nox4 NADPH oxidase 4 located_in IDA PMID:27525436 ARUK-UCL PMID:27525436 RGD:13601987 NCBI chr 1:140,900,886...141,078,844
Ensembl chr 1:140,901,097...141,077,406 		JBrowse link
G Osbpl3 oxysterol binding protein-like 3 located_in
is_active_in		 ISO
IBA		 (PMID:14593528)
PMID:21873635		 RGD PMID:14593528 PMID:21873635 RGD:13792537 NCBI chr 4:79,346,583...79,523,523
Ensembl chr 4:79,350,349...79,523,393 		JBrowse link
G Osbpl6 oxysterol binding protein-like 6 located_in
is_active_in		 ISO
IBA		 (PMID:14593528)
PMID:21873635		 RGD PMID:14593528 PMID:21873635 RGD:13792537 NCBI chr 3:61,343,776...61,541,170
Ensembl chr 3:61,343,809...61,537,102 		JBrowse link
G Osbpl7 oxysterol binding protein-like 7 located_in
is_active_in		 ISO
IBA		 (PMID:14593528)
PMID:21873635		 RGD PMID:14593528 PMID:21873635 RGD:13792537 NCBI chr10:82,035,995...82,053,566
Ensembl chr10:82,036,042...82,053,557 		JBrowse link
G Sec23ip SEC23 interacting protein located_in ISO (MGI:5052222|PMID:21640725) RGD PMID:21640725 MGI:5052222 NCBI chr 1:183,320,950...183,363,944
Ensembl chr 1:183,321,075...183,363,920 		JBrowse link
G Syt6 synaptotagmin 6 located_in ISO (MGI:5142391|PMID:10531344) RGD PMID:10531344 MGI:5142391 NCBI chr 2:191,093,009...191,152,283
Ensembl chr 2:191,093,007...191,149,956 		JBrowse link
G Trim13 tripartite motif-containing 13 located_in ISO (PMID:17314412), (PMID:22178386) RGD PMID:17314412 PMID:22178386 NCBI chr15:35,733,548...35,772,676
Ensembl chr15:35,734,107...35,772,677 		JBrowse link
perinuclear endoplasmic reticulum lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clu clusterin located_in ISO
IEA
ISS		 (PMID:22689054)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:22689054 GO_REF:0000024 GO_REF:0000107 NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315 		JBrowse link
perinuclear endoplasmic reticulum membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgat2 diacylglycerol O-acyltransferase 2 located_in ISO
ISS		 (PMID:27184406)
GO_REF:0000024		 RGD
UniProt		 PMID:27184406 GO_REF:0000024 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428 		JBrowse link
G Mogat2 monoacylglycerol O-acyltransferase 2 located_in ISO (PMID:27184406) RGD PMID:27184406 NCBI chr 1:153,521,813...153,545,756
Ensembl chr 1:153,521,815...153,545,756 		JBrowse link
G Mogat3 monoacylglycerol O-acyltransferase 3 located_in ISO (PMID:27184406) RGD PMID:27184406 NCBI chr12:19,668,703...19,669,420
Ensembl chr12:19,668,788...19,670,754 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 located_in IEA
ISO		 GO_REF:0000107
(MGI:5613738|PMID:25217619)		 Ensembl
RGD		 PMID:25217619 GO_REF:0000107 MGI:5613738 NCBI chr 2:32,878,942...32,963,611
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20082
    cellular anatomical entity 19921
      perinuclear endoplasmic reticulum 26
        perinuclear endoplasmic reticulum lumen 1
        perinuclear endoplasmic reticulum membrane 4
Path 2
Term Annotations click to browse term
  cellular_component 20082
    cellular anatomical entity 19921
      intracellular anatomical structure 14411
        intracellular organelle 12801
          intracellular membrane-bounded organelle 11180
            endoplasmic reticulum 1748
              perinuclear endoplasmic reticulum 26
                perinuclear endoplasmic reticulum lumen 1
                perinuclear endoplasmic reticulum membrane 4
paths to the root