Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:ciliary plasm
go back to main search page
Accession:GO:0097014 term browser browse the term
Definition:All of the contents of a cilium, excluding the plasma membrane surrounding the cilium.
Comment:Note that we deem cilium and microtubule-based flagellum to be equivalent. Also, researchers consider the composition of both the plasm and the membrane of the cilium to be detectably different from that in the non-ciliary cytosol and plasma membrane (e.g. in terms of calcium ion concentration, membrane lipid composition, and more). For this reason, the term "ciliary plasm" is not linked to "cytoplasm".
Synonyms:exact_synonym: cilium plasm
 narrow_synonym: microtubule-based flagellar matrix;   microtubule-based flagellum matrix
 related_synonym: cilial cytoplasm;   ciliary cytoplasm;   cilium cytoplasm;   microtubule-based flagellar cytoplasm;   microtubule-based flagellum cytoplasm



show annotations for term's descendants           Sort by:
 
ciliary plasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync2i1 dynein 2 intermediate chain 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:137,133,418...137,189,937
Ensembl chr 6:137,133,418...137,188,719
JBrowse link
G Dync2i2 dynein 2 intermediate chain 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:13,306,039...13,322,121
Ensembl chr 3:13,306,039...13,322,121
JBrowse link
G Nek4 NIMA-related kinase 4 IDA RGD PMID:21685204 RGD:13204813 NCBI chr16:6,144,900...6,185,376
Ensembl chr16:6,144,959...6,188,932
JBrowse link
A axonemal microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap206 cilia and flagella associated protein 206 colocalizes_with ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:49,254,399...49,299,145
Ensembl chr 5:49,254,408...49,299,090
JBrowse link
axonemal basal plate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ift88 intraflagellar transport 88 located_in ISO (MGI:5544506|PMID:24302887) RGD PMID:24302887 MGI:5544506 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector located_in
is_active_in
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(MGI:5544506|PMID:24302887)
Ensembl
RGD
PMID:24302887 PMID:21873635 GO_REF:0000107 MGI:5544506, RGD:13792537 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113
JBrowse link
axonemal central apparatus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hydin Hydin, axonemal central pair apparatus protein located_in ISO (MGI:6331463|PMID:30535028) RGD PMID:30535028 MGI:6331463 NCBI chr19:38,236,996...38,583,271
Ensembl chr19:38,236,464...38,583,264
JBrowse link
G LOC102550841 uncharacterized LOC102550841 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 9:71,332,992...72,252,708 JBrowse link
G Spag16 sperm associated antigen 16 located_in
is_active_in
ISO
IBA
(MGI:2389554|PMID:12391165)
PMID:21873635
MGI:3606979 (MGI:3766863|PMID:17699735)
RGD PMID:12391165 PMID:17699735 PMID:21873635 MGI:2389554 MGI:3766863, RGD:13792537 NCBI chr 9:71,333,005...72,252,772 JBrowse link
G Spag17 sperm associated antigen 17 located_in
is_active_in
ISO
IBA
MGI:4364991 (MGI:3807761|PMID:15827353), (MGI:5576118|PMID:23418344)
PMID:21873635
RGD PMID:15827353 PMID:23418344 PMID:21873635 MGI:3807761 MGI:5576118, RGD:13792537 NCBI chr 2:187,264,004...187,511,061
Ensembl chr 2:187,264,009...187,510,501
JBrowse link
G Spag6l sperm associated antigen 6-like located_in ISO MGI:1913972 (MGI:3766863|PMID:17699735) RGD PMID:17699735 MGI:3766863 NCBI chr11:84,173,628...84,269,374
Ensembl chr11:84,173,526...84,269,364
JBrowse link
G Spef1 sperm flagellar 1 located_in ISO (MGI:6331463|PMID:30535028) RGD PMID:30535028 MGI:6331463 NCBI chr 3:118,390,659...118,396,842
Ensembl chr 3:118,390,575...118,394,531
JBrowse link
axonemal central pair projection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hydin Hydin, axonemal central pair apparatus protein located_in ISO MGI:1856913 (MGI:3793384|PMID:18250199) RGD PMID:18250199 MGI:3793384 NCBI chr19:38,236,996...38,583,271
Ensembl chr19:38,236,464...38,583,264
JBrowse link
axonemal dynein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc65 coiled-coil domain containing 65 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:129,857,118...129,870,803
Ensembl chr 7:129,857,247...129,870,803
JBrowse link
G Dnah2 dynein, axonemal, heavy chain 2 part_of IEA
ISO
GO_REF:0000107
(MGI:6436377|PMID:30060180)
Ensembl
RGD
PMID:30060180 GO_REF:0000107 MGI:6436377 NCBI chr10:54,142,648...54,268,901
Ensembl chr10:54,142,737...54,267,298
JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 part_of ISO MGI:2180081 (MGI:2178772|PMID:11912187) RGD PMID:11912187 MGI:2178772 NCBI chr 2:78,937,788...79,255,551
Ensembl chr 2:78,937,800...79,254,890
JBrowse link
G Dnah6 dynein, axonemal, heavy chain 6 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:105,064,123...105,284,361
Ensembl chr 4:105,064,125...105,284,376
JBrowse link
G Dnai2 dynein, axonemal, intermediate chain 2 part_of ISO (PMID:11153919) RGD PMID:11153919 NCBI chr10:99,759,966...99,793,379
Ensembl chr10:99,759,966...99,793,378
JBrowse link
G Dnai3 dynein axonemal intermediate chain 3 part_of ISO (MGI:6436377|PMID:30060180) RGD PMID:30060180 MGI:6436377 NCBI chr 2:234,947,910...235,006,173
Ensembl chr 2:234,929,677...235,006,173
JBrowse link
G Dnai4 dynein axonemal intermediate chain 4 part_of IBA
ISO
ISS
PMID:21873635
(MGI:6436377|PMID:30060180)
GO_REF:0000024
RGD
UniProt
PMID:30060180 PMID:21873635 GO_REF:0000024 MGI:6436377, RGD:13792537 NCBI chr 5:117,787,398...117,876,140
Ensembl chr 5:117,788,464...117,876,127
JBrowse link
G Dnai7 dynein axonemal intermediate chain 7 part_of ISO (MGI:6436377|PMID:30060180) RGD PMID:30060180 MGI:6436377 NCBI chr 4:178,143,499...178,179,871
Ensembl chr 4:178,143,500...178,179,980
JBrowse link
G Drc1 dynein regulatory complex subunit 1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:26,025,004...26,059,438
Ensembl chr 6:26,025,005...26,059,414
JBrowse link
axonemal microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfgef2 ADP ribosylation factor guanine nucleotide exchange factor 2 located_in IDA PMID:15198677 UniProt PMID:15198677 RGD:1304338 NCBI chr 3:155,547,504...155,633,652
Ensembl chr 3:155,547,538...155,630,856
JBrowse link
G Cep162 centrosomal protein 162 located_in
is_active_in
ISO
IBA
ISS
(PMID:23644468)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23644468 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:88,149,726...88,208,249
Ensembl chr 8:88,149,726...88,206,830
JBrowse link
G Rpgrip1l Rpgrip1-like IDA RGD PMID:17558407 RGD:11537356 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Saxo1 stabilizer of axonemal microtubules 1 located_in
is_active_in
ISO
IBA
(PMID:25673876)
PMID:21873635
RGD PMID:25673876 PMID:21873635 RGD:13792537 NCBI chr 5:100,937,134...101,093,308
Ensembl chr 5:100,937,130...101,093,281
JBrowse link
G Saxo2 stabilizer of axonemal microtubules 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:136,596,445...136,638,445
Ensembl chr 1:136,623,493...136,638,454
JBrowse link
G Saxol1 stabilizer of axonemal microtubules like 1 located_in
is_active_in
ISS
IBA
GO_REF:0000024
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr  X:27,973,442...27,975,599 JBrowse link
G Ttc30a1 tetratricopeptide repeat domain 30A1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:60,899,193...60,901,634
Ensembl chr 3:60,899,196...60,901,634
JBrowse link
G Ttc30b tetratricopeptide repeat domain 30B located_in
is_active_in
IEA
IBA
GO_REF:0000104
PMID:21873635
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 3:60,855,809...60,858,380
Ensembl chr 3:60,855,575...60,858,389
JBrowse link
axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030901.1 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G AABR07058658.1 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 7:120,001,794...120,045,075 JBrowse link
G AABR07063281.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Ak8 adenylate kinase 8 located_in ISO (MGI:5646278|PMID:24740601) RGD PMID:24740601 MGI:5646278 NCBI chr 3:12,028,895...12,144,468
Ensembl chr 3:12,028,954...12,144,465
JBrowse link
G Akap14 A-kinase anchoring protein 14 located_in ISO (PMID:12475942) RGD PMID:12475942 NCBI chr  X:116,395,512...116,410,697
Ensembl chr  X:116,395,516...116,410,697
JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 located_in ISO (MGI:5527012|PMID:24089209) RGD PMID:24089209 MGI:5527012 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Arl13b ADP-ribosylation factor like GTPase 13B part_of ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
JBrowse link
G Arl3 ADP ribosylation factor like GTPase 3 located_in IEA
ISO
GO_REF:0000107
(MGI:5925653|PMID:26455799)
Ensembl
RGD
PMID:26455799 GO_REF:0000107 MGI:5925653 NCBI chr 1:245,400,659...245,446,673
Ensembl chr 1:245,400,550...245,446,820
JBrowse link
G Arl6 ADP-ribosylation factor like GTPase 6 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:40,711,878...40,738,254
Ensembl chr11:40,712,022...40,737,937
JBrowse link
G Atg14 autophagy related 14 located_in ISS
ISO
GO_REF:0000024
(MGI:5527012|PMID:24089209)
UniProt
RGD
PMID:24089209 GO_REF:0000024 MGI:5527012 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Atg16l1 autophagy related 16-like 1 located_in ISO (MGI:5527012|PMID:24089209) RGD PMID:24089209 MGI:5527012 NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
JBrowse link
G Atg5 autophagy related 5 located_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5527012|PMID:24089209)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24089209 GO_REF:0000024 GO_REF:0000107 MGI:5527012 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 located_in ISS
ISO
GO_REF:0000024
(MGI:5527012|PMID:24089209)
UniProt
RGD
PMID:24089209 GO_REF:0000024 MGI:5527012 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 located_in ISO (MGI:5588761|PMID:24833722) RGD PMID:24833722 MGI:5588761 NCBI chr 3:54,410,429...54,431,831
Ensembl chr 3:54,410,775...54,431,829
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 located_in
is_active_in
ISO
IBA
(MGI:5492028|PMID:22302990)
PMID:21873635
RGD PMID:22302990 PMID:21873635 MGI:5492028, RGD:13792537 NCBI chr 2:119,434,760...119,474,665
Ensembl chr 2:119,434,760...119,474,396
JBrowse link
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 located_in ISO (MGI:6436727|PMID:32482850) RGD PMID:32482850 MGI:6436727 NCBI chr12:1,643,062...1,666,685
Ensembl chr12:1,643,251...1,666,685
JBrowse link
G Ccdc113 coiled-coil domain containing 113 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:9,497,000...9,516,917
Ensembl chr19:9,496,886...9,516,923
JBrowse link
G Ccdc39 coiled-coil domain containing 39 located_in
is_active_in
ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:21131972), (PMID:21131974), (PMID:26387594)
PMID:21873635
GO_REF:0000002
UniProt
RGD
InterPro
PMID:21131972 PMID:21131974 PMID:26387594 PMID:21873635 GO_REF:0000002 GO_REF:0000024, RGD:13792537 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350
JBrowse link
G Ccdc40 coiled-coil domain containing 40 located_in ISO (PMID:23255504) RGD PMID:23255504 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
JBrowse link
G Ccdc63 coiled-coil domain containing 63 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:34,424,388...34,453,080
Ensembl chr12:34,424,344...34,453,085
JBrowse link
G Ccdc65 coiled-coil domain containing 65 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:129,857,118...129,870,803
Ensembl chr 7:129,857,247...129,870,803
JBrowse link
G Ccdc96 coiled-coil domain containing 96 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:74,276,568...74,279,072
Ensembl chr14:74,276,960...74,278,888
JBrowse link
G Ccsap centriole, cilia and spindle-associated protein located_in
is_active_in
ISO
IBA
(PMID:22493317)
PMID:21873635
RGD PMID:22493317 PMID:21873635 RGD:13792537 NCBI chr19:51,824,954...51,843,469
Ensembl chr19:51,826,994...51,842,753
JBrowse link
G Cenpf centromere protein F located_in ISO (MGI:5694347|PMID:25564561) RGD PMID:25564561 MGI:5694347 NCBI chr13:101,184,127...101,229,714
Ensembl chr13:101,184,127...101,229,669
JBrowse link
G Cfap206 cilia and flagella associated protein 206 located_in
is_active_in
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:6452763|PMID:32376681)
UniProt
RGD
PMID:32376681 PMID:21873635 GO_REF:0000024 MGI:6452763, RGD:13792537 NCBI chr 5:49,254,399...49,299,145
Ensembl chr 5:49,254,408...49,299,090
JBrowse link
G Cfap36 cilia and flagella associated protein 36 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:102,966,006...102,991,693
Ensembl chr14:102,966,001...102,991,555
JBrowse link
G Cfap43 cilia and flagella associated protein 43 located_in
is_active_in
ISO
IBA
(MGI:6402702|PMID:31884020)
PMID:21873635
RGD PMID:31884020 PMID:21873635 MGI:6402702, RGD:13792537 NCBI chr 1:246,625,259...246,712,438
Ensembl chr 1:246,625,262...246,712,443
JBrowse link
G Cfap45 cilia and flagella associated protein 45 located_in ISO
IEA
(PMID:33139725)
GO_REF:0000107
RGD
Ensembl
PMID:33139725 GO_REF:0000107 NCBI chr13:84,989,474...85,012,880
Ensembl chr13:84,981,728...85,012,878
JBrowse link
G Cfap52 cilia and flagella associated protein 52 located_in ISO
IEA
(PMID:33139725)
GO_REF:0000107
RGD
Ensembl
PMID:33139725 GO_REF:0000107 NCBI chr10:52,613,761...52,654,922
Ensembl chr10:52,613,762...52,654,934
JBrowse link
G Cfap53 cilia and flagella associated protein 53 located_in ISO (MGI:6503922|PMID:33347437) RGD PMID:33347437 MGI:6503922 NCBI chr18:67,884,651...67,955,873
Ensembl chr18:67,869,855...67,952,318
JBrowse link
G Cfap70 cilia and flagella associated protein 70 located_in ISO (MGI:6383288|PMID:30158508) RGD PMID:30158508 MGI:6383288 NCBI chr15:3,852,381...3,918,036
Ensembl chr15:3,852,509...3,918,014
JBrowse link
G Ctsh cathepsin H IDA RGD PMID:12838426 RGD:5686399 NCBI chr 8:90,608,941...90,627,824
Ensembl chr 8:90,608,941...90,627,824
JBrowse link
G Cys1 cystin 1 located_in ISO (MGI:2158985|PMID:11854326), (MGI:4461844|PMID:19850956)
(MGI:4461844|PMID:19850956)
RGD PMID:11854326 PMID:19850956 MGI:2158985 MGI:4461844 NCBI chr 6:41,300,836...41,318,071
Ensembl chr 6:41,300,836...41,318,071
JBrowse link
G Dcdc2 doublecortin domain containing 2 located_in
is_active_in
ISO
IBA
ISS
(PMID:25557784), (PMID:27319779)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:25557784 PMID:27319779 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr17:39,845,952...40,031,781
Ensembl chr17:39,845,952...40,030,743
JBrowse link
G Dcx doublecortin is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 located_in
is_active_in
ISO
IBA
ISS
IEA
(PMID:18385425)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:18385425 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
JBrowse link
G Dnah1 dynein, axonemal, heavy chain 1 located_in ISO
ISS
(PMID:24360805)
GO_REF:0000024
RGD
UniProt
PMID:24360805 GO_REF:0000024 NCBI chr16:6,455,514...6,517,103
Ensembl chr16:6,456,002...6,518,350
JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 located_in
is_active_in
ISO
IBA
(PMID:31178125)
PMID:21873635
(MGI:6120222|PMID:26909801), (MGI:6503922|PMID:33347437)
(PMID:33139725)
RGD PMID:26909801 PMID:31178125 PMID:33139725 PMID:33347437 PMID:21873635 More... MGI:6120222 MGI:6503922, RGD:13792537, RGD:13792537 NCBI chr 6:138,839,175...139,155,554
Ensembl chr 6:138,839,177...139,155,536
JBrowse link
G Dnah17 dynein, axonemal, heavy chain 17 located_in
is_active_in
ISO
IBA
(PMID:31178125)
PMID:21873635
RGD PMID:31178125 PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr10:103,244,144...103,364,953
Ensembl chr10:103,249,363...103,364,901
JBrowse link
G Dnah2 dynein, axonemal, heavy chain 2 located_in
is_active_in
ISO
IBA
(PMID:31178125)
PMID:21873635
RGD PMID:31178125 PMID:21873635 RGD:13792537 NCBI chr10:54,142,648...54,268,901
Ensembl chr10:54,142,737...54,267,298
JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 located_in
is_active_in
ISS
ISO
IBA
GO_REF:0000024
(MGI:5551687|PMID:23849778), (MGI:5607335|PMID:25192045), (MGI:6284218|PMID:29916806), (MGI:6503922|PMID:33347437)
(PMID:15750039), (PMID:16492982), (PMID:18950741), (PMID:23849778), (PMID:24203976), (PMID:26387594), (PMID:26909801), (PMID:29916806), (PMID:31178125)
PMID:21873635
UniProt
RGD
PMID:15750039 PMID:16492982 PMID:18950741 PMID:23849778 PMID:24203976 More... GO_REF:0000024 MGI:5551687 MGI:5607335 MGI:6284218 MGI:6503922, RGD:13792537 NCBI chr 2:78,937,788...79,255,551
Ensembl chr 2:78,937,800...79,254,890
JBrowse link
G Dnah8 dynein, axonemal, heavy chain 8 located_in ISO (PMID:31178125), (PMID:32619401) RGD PMID:31178125 PMID:32619401 NCBI chr20:8,692,939...8,946,780
Ensembl chr20:8,692,963...8,946,772
JBrowse link
G Dnah9 dynein, axonemal, heavy chain 9 is_active_in
located_in
IBA
ISO
PMID:21873635
(PMID:11104725), (PMID:11839535), (PMID:15750039), (PMID:18950741), (PMID:23849778), (PMID:31178125)
RGD PMID:11104725 PMID:11839535 PMID:15750039 PMID:18950741 PMID:23849778 More... RGD:13792537, RGD:13792537 NCBI chr10:50,496,174...50,864,909
Ensembl chr10:50,497,688...50,864,949
JBrowse link
G Dnai2 dynein, axonemal, intermediate chain 2 located_in ISO (MGI:6284218|PMID:29916806)
(PMID:11153919), (PMID:18950741), (PMID:23849778)
RGD PMID:11153919 PMID:18950741 PMID:23849778 PMID:29916806 MGI:6284218 NCBI chr10:99,759,966...99,793,379
Ensembl chr10:99,759,966...99,793,378
JBrowse link
G Dnai4 dynein axonemal intermediate chain 4 located_in ISS
ISO
GO_REF:0000024
(MGI:6436377|PMID:30060180)
UniProt
RGD
PMID:30060180 GO_REF:0000024 MGI:6436377 NCBI chr 5:117,787,398...117,876,140
Ensembl chr 5:117,788,464...117,876,127
JBrowse link
G Dnai7 dynein axonemal intermediate chain 7 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:178,143,499...178,179,871
Ensembl chr 4:178,143,500...178,179,980
JBrowse link
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 located_in ISO (MGI:3806784|PMID:18247331) RGD PMID:18247331 MGI:3806784 NCBI chr 1:154,848,586...154,863,042
Ensembl chr 1:154,848,594...154,862,963
JBrowse link
G Dnali1 dynein, axonemal, light intermediate chain 1 located_in
is_active_in
ISS
ISO
IBA
GO_REF:0000024
(PMID:23849778), (PMID:26909801), (PMID:31178125)
PMID:21873635
(MGI:3628860|PMID:16496424), (MGI:6284218|PMID:29916806)
UniProt
RGD
PMID:16496424 PMID:23849778 PMID:26909801 PMID:29916806 PMID:31178125 More... GO_REF:0000024 MGI:3628860 MGI:6284218, RGD:13792537 NCBI chr 5:137,318,475...137,327,313
Ensembl chr 5:137,318,477...137,327,336
JBrowse link
G Drc1 dynein regulatory complex subunit 1 located_in
is_active_in
ISS
IBA
GO_REF:0000024
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:26,025,004...26,059,438
Ensembl chr 6:26,025,005...26,059,414
JBrowse link
G Drc3 dynein regulatory complex subunit 3 located_in ISO (PMID:26387594) RGD PMID:26387594 NCBI chr10:45,149,094...45,200,659
Ensembl chr10:45,157,354...45,199,369
JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 located_in
is_active_in
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(MGI:5009180|PMID:12802074)
Ensembl
RGD
PMID:12802074 PMID:21873635 GO_REF:0000107 MGI:5009180, RGD:13792537 NCBI chr 8:4,189,257...4,412,183
Ensembl chr 8:4,189,257...4,412,183
JBrowse link
G Dync2i2 dynein 2 intermediate chain 2 located_in ISO (MGI:5551675|PMID:24183451) RGD PMID:24183451 MGI:5551675 NCBI chr 3:13,306,039...13,322,121
Ensembl chr 3:13,306,039...13,322,121
JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 located_in
is_active_in
ISO
IBA
(MGI:5009180|PMID:12802074)
PMID:21873635
RGD PMID:12802074 PMID:21873635 MGI:5009180, RGD:13792537 NCBI chr 6:9,992,537...10,025,403
Ensembl chr 6:9,992,541...10,025,336
JBrowse link
G Dynlt2b dynein light chain Tctex-type 2B colocalizes_with ISO (PMID:25830415) RGD PMID:25830415 NCBI chr11:68,359,138...68,367,573
Ensembl chr11:68,358,263...68,367,499
JBrowse link
G Dynlt4 dynein light chain Tctex-type 4 located_in ISO (PMID:23789093)
(MGI:5510909|PMID:23789093)
RGD PMID:23789093 MGI:5510909 NCBI chr 5:130,605,417...130,607,224
Ensembl chr 5:130,605,399...130,607,666
JBrowse link
G Dzip1l DAZ interacting zinc finger protein 1-like located_in ISO (MGI:6149643|PMID:29487109) RGD PMID:29487109 MGI:6149643 NCBI chr 8:100,188,414...100,229,077
Ensembl chr 8:100,194,999...100,228,988
JBrowse link
G Efhc1 EF-hand domain containing 1 located_in
is_active_in
ISO
IBA
(MGI:3529636|PMID:15670853)
PMID:21873635
RGD PMID:15670853 PMID:21873635 MGI:3529636, RGD:13792537 NCBI chr 9:23,375,815...23,414,283
Ensembl chr 9:23,375,840...23,414,283
JBrowse link
G Efhc2 EF-hand domain containing 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:5,360,499...5,564,004
Ensembl chr  X:5,360,617...5,560,970
JBrowse link
G Gabarap GABA type A receptor-associated protein located_in ISS
ISO
GO_REF:0000024
(MGI:5527012|PMID:24089209)
UniProt
RGD
PMID:24089209 GO_REF:0000024 MGI:5527012 NCBI chr10:54,714,834...54,717,769
Ensembl chr10:54,714,198...54,717,765
JBrowse link
G Gas8 growth arrest specific 8 located_in ISS
ISO
GO_REF:0000024
(PMID:16643277), (PMID:26387594)
UniProt
RGD
PMID:16643277 PMID:26387594 GO_REF:0000024 NCBI chr19:51,552,770...51,572,323
Ensembl chr19:51,552,816...51,572,305
JBrowse link
G Gli1 GLI family zinc finger 1 part_of ISO (MGI:3692156|PMID:16254602) RGD PMID:16254602 MGI:3692156 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
JBrowse link
G Gli2 GLI family zinc finger 2 part_of ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Gli3 GLI family zinc finger 3 part_of ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Gnat3 G protein subunit alpha transducin 3 IDA RGD PMID:17021831 RGD:2302145 NCBI chr 4:17,162,500...17,212,283
Ensembl chr 4:17,162,490...17,212,283
JBrowse link
G Ift140 intraflagellar transport 140 located_in
is_active_in
ISO
IBA
(MGI:4460838|PMID:20368623), (MGI:5553228|PMID:23418020)
PMID:21873635
RGD PMID:20368623 PMID:23418020 PMID:21873635 MGI:4460838 MGI:5553228, RGD:13792537 NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433
JBrowse link
G Ift172 intraflagellar transport 172 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:25,081,933...25,121,271 JBrowse link
G Ift57 intraflagellar transport 57 part_of ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr11:51,051,520...51,124,909
Ensembl chr11:51,059,611...51,124,812
JBrowse link
G Ift88 intraflagellar transport 88 located_in ISO (MGI:2158985|PMID:11854326), (MGI:2664063|PMID:11251073), (MGI:3773480|PMID:18066062), (MGI:4460838|PMID:20368623), (MGI:5544506|PMID:24302887) RGD PMID:11251073 PMID:11854326 PMID:18066062 PMID:20368623 PMID:24302887 MGI:2158985 MGI:2664063 MGI:3773480 MGI:4460838 MGI:5544506 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E located_in ISO
ISS
(PMID:19668215)
(MGI:4359555|PMID:19668215)
GO_REF:0000024
RGD
UniProt
PMID:19668215 GO_REF:0000024 MGI:4359555 NCBI chr 3:9,216,776...9,229,539
Ensembl chr 3:9,216,776...9,229,450
JBrowse link
G Kif17 kinesin family member 17 located_in ISO (MGI:4353477|PMID:19384852) RGD PMID:19384852 MGI:4353477 NCBI chr 5:150,482,288...150,521,471
Ensembl chr 5:150,481,578...150,519,638
JBrowse link
G Kif19 kinesin family member 19 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:99,800,185...99,826,546
Ensembl chr10:99,799,400...99,826,546
JBrowse link
G Kif3a kinesin family member 3a IDA RGD PMID:9920666 RGD:1581597 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
JBrowse link
G Kifap3 kinesin-associated protein 3 located_in
is_active_in
ISO
IBA
(MGI:4353477|PMID:19384852)
PMID:21873635
RGD PMID:19384852 PMID:21873635 MGI:4353477, RGD:13792537 NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650
JBrowse link
G Lca5 lebercilin LCA5 located_in
is_active_in
ISO
IBA
(MGI:5588761|PMID:24833722)
PMID:21873635
RGD PMID:24833722 PMID:21873635 MGI:5588761, RGD:13792537 NCBI chr 8:84,307,696...84,375,025
Ensembl chr 8:84,317,659...84,374,956
JBrowse link
G Lca5l lebercilin LCA5 like is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:35,460,648...35,495,133
Ensembl chr11:35,461,118...35,495,047
JBrowse link
G LOC103691261 sperm flagellar protein 1-like is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:194,769,043...194,776,455
Ensembl chr 1:194,769,776...194,776,449
JBrowse link
G Mak male germ cell-associated kinase located_in ISO (MGI:5298333|PMID:21148103) RGD PMID:21148103 MGI:5298333 NCBI chr17:23,683,674...23,731,125
Ensembl chr17:23,693,878...23,730,001
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta located_in ISO (MGI:5527012|PMID:24089209) RGD PMID:24089209 MGI:5527012 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Map4 microtubule-associated protein 4 located_in ISO (PMID:23572511) RGD PMID:23572511 NCBI chr 8:109,925,233...110,064,370
Ensembl chr 8:109,925,575...110,064,362
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 NOT|located_in ISO (PMID:29021280) RGD PMID:29021280 NCBI chr 7:107,694,907...107,714,640
Ensembl chr 7:107,694,964...107,714,645
JBrowse link
G Mapt microtubule-associated protein tau located_in ISO (MGI:3821640|PMID:19004860) RGD PMID:19004860 MGI:3821640 NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
JBrowse link
G Mns1 meiosis-specific nuclear structural 1 located_in ISO
ISS
(MGI:5318625|PMID:22396656)
(PMID:30148830)
GO_REF:0000024
RGD
UniProt
PMID:22396656 PMID:30148830 GO_REF:0000024 MGI:5318625 NCBI chr 8:73,148,877...73,169,570
Ensembl chr 8:73,148,877...73,176,925
JBrowse link
G Nme8 NME/NM23 family member 8 part_of ISO (MGI:2680785|PMID:12909633) RGD PMID:12909633 MGI:2680785 NCBI chr17:45,237,022...45,304,948
Ensembl chr17:45,238,120...45,304,948
JBrowse link
G Odad1 outer dynein arm docking complex subunit 1 located_in
is_active_in
ISO
IBA
(PMID:25192045)
PMID:21873635
RGD PMID:25192045 PMID:21873635 RGD:13792537 NCBI chr 1:96,392,132...96,420,926
Ensembl chr 1:96,394,824...96,420,925
JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 located_in ISO (PMID:23849778), (PMID:24203976) RGD PMID:23849778 PMID:24203976 NCBI chr17:55,216,877...55,409,872
Ensembl chr17:55,218,991...55,409,399
JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 located_in ISO (PMID:25192045) RGD PMID:25192045 NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499
JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 located_in ISO (PMID:27486780)
(MGI:6503922|PMID:33347437)
RGD PMID:27486780 PMID:33347437 MGI:6503922 NCBI chr10:85,480,089...85,508,603
Ensembl chr10:85,480,094...85,508,603
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 located_in ISS
ISO
GO_REF:0000024
(MGI:5527012|PMID:24089209)
UniProt
RGD
PMID:24089209 GO_REF:0000024 MGI:5527012 NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha colocalizes_with
located_in
ISO
IEA
(PMID:12475942)
GO_REF:0000107
RGD
Ensembl
PMID:12475942 GO_REF:0000107 NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430
JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha colocalizes_with ISO (PMID:12475942) RGD PMID:12475942 NCBI chr10:94,621,042...94,639,534
Ensembl chr10:94,620,039...94,639,041
JBrowse link
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha colocalizes_with
located_in
ISO
IEA
(PMID:12475942)
GO_REF:0000107
RGD
Ensembl
PMID:12475942 GO_REF:0000107 NCBI chr 8:109,393,189...109,458,832
Ensembl chr 8:109,395,833...109,455,628
JBrowse link
G Rp1 RP1, axonemal microtubule associated is_active_in
located_in
IBA
ISO
PMID:21873635
(MGI:2676521|PMID:14507858), (MGI:4460838|PMID:20368623), (MGI:4461813|PMID:20592197), (MGI:5588761|PMID:24833722), (MGI:6194004|PMID:29899041)
RGD PMID:14507858 PMID:20368623 PMID:20592197 PMID:24833722 PMID:29899041 More... MGI:2676521 MGI:4460838 MGI:4461813 MGI:5588761 MGI:6194004, RGD:13792537 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363
JBrowse link
G Rp1l1 RP1 like 1 located_in
is_active_in
ISO
IBA
(MGI:4353917|PMID:19657028)
PMID:21873635
RGD PMID:19657028 PMID:21873635 MGI:4353917, RGD:13792537 NCBI chr15:38,259,595...38,271,269
Ensembl chr15:38,259,928...38,270,316
JBrowse link
G Rpgrip1 RPGR interacting protein 1 located_in ISO (MGI:1933524|PMID:11104772) RGD PMID:11104772 MGI:1933524 NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605
JBrowse link
G Rpgrip1l Rpgrip1-like located_in ISO (PMID:17558409) RGD PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Rsph4a radial spoke head component 4A located_in
is_active_in
ISO
IBA
(PMID:23255504)
PMID:21873635
RGD PMID:23255504 PMID:21873635 RGD:13792537 NCBI chr20:30,764,409...30,780,574
Ensembl chr20:30,764,409...30,780,574
JBrowse link
G Rsph6a radial spoke head 6 homolog A located_in
is_active_in
ISO
IBA
(MGI:6279049|PMID:30239614)
PMID:21873635
RGD PMID:30239614 PMID:21873635 MGI:6279049, RGD:13792537 NCBI chr 1:78,700,727...78,720,444
Ensembl chr 1:78,700,814...78,720,431
JBrowse link
G Rsph9 radial spoke head component 9 located_in
is_active_in
ISO
IBA
(PMID:26909801)
PMID:21873635
(MGI:6451324|PMID:30383886)
RGD PMID:26909801 PMID:30383886 PMID:21873635 MGI:6451324, RGD:13792537 NCBI chr 9:14,839,565...14,860,062
Ensembl chr 9:14,840,115...14,860,062
JBrowse link
G Septin2 septin 2 located_in ISO (PMID:23572511) RGD PMID:23572511 NCBI chr 9:94,018,141...94,051,386
Ensembl chr 9:94,018,208...94,051,386
JBrowse link
G Septin7 septin 7 located_in ISS
ISO
GO_REF:0000024
(PMID:23572511)
UniProt
RGD
PMID:23572511 GO_REF:0000024 NCBI chr 8:23,719,448...23,783,247
Ensembl chr 8:23,716,030...23,783,243
JBrowse link
G Septin9 septin 9 located_in ISO
IEA
(PMID:23572511)
GO_REF:0000107
RGD
Ensembl
PMID:23572511 GO_REF:0000107 NCBI chr10:102,409,798...102,579,056
Ensembl chr10:102,409,711...102,579,055
JBrowse link
G Spag16 sperm associated antigen 16 located_in ISO (MGI:3844768|PMID:19305393)
(MGI:3052627|PMID:15328412)
(MGI:3619868|PMID:16382026)
RGD PMID:15328412 PMID:16382026 PMID:19305393 MGI:3052627 MGI:3619868 MGI:3844768 NCBI chr 9:71,333,005...72,252,772 JBrowse link
G Spag6l sperm associated antigen 6-like located_in ISO (PMID:10493827)
(MGI:6331463|PMID:30535028)
RGD PMID:10493827 PMID:30535028 MGI:6331463 NCBI chr11:84,173,628...84,269,374
Ensembl chr11:84,173,526...84,269,364
JBrowse link
G Spata4 spermatogenesis associated 4 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:37,213,809...37,223,169
Ensembl chr16:37,213,812...37,223,164
JBrowse link
G Spata7 spermatogenesis associated 7 located_in
is_active_in
ISO
IBA
ISS
IEA
(PMID:25398945)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:25398945 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 6:117,879,828...117,925,284
Ensembl chr 6:117,879,823...117,925,284
JBrowse link
G Spef1 sperm flagellar 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:118,390,659...118,396,842
Ensembl chr 3:118,390,575...118,394,531
JBrowse link
G Tmem67 transmembrane protein 67 colocalizes_with IDA RGD PMID:23516626 RGD:11535084 NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334
JBrowse link
G Togaram1 TOG array regulator of axonemal microtubules 1 located_in ISO (PMID:32453716) RGD PMID:32453716 NCBI chr 6:83,019,025...83,083,343
Ensembl chr 6:83,018,859...83,082,807
JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 located_in
is_active_in
ISO
IBA
(MGI:5298450|PMID:21945076)
PMID:21873635
RGD PMID:21945076 PMID:21873635 MGI:5298450, RGD:13792537 NCBI chr 9:92,073,622...92,110,427
Ensembl chr 9:92,073,640...92,108,977
JBrowse link
G Ttll10 tubulin tyrosine ligase like 10 located_in ISS
ISO
GO_REF:0000024
(MGI:3850271|PMID:19524510)
UniProt
RGD
PMID:19524510 GO_REF:0000024 MGI:3850271 NCBI chr 5:166,630,147...166,644,114
Ensembl chr 5:166,630,152...166,653,707
JBrowse link
G Ttll3 tubulin tyrosine ligase like 3 located_in ISO (MGI:3850271|PMID:19524510), (MGI:6501614|PMID:33414192) RGD PMID:19524510 PMID:33414192 MGI:3850271 MGI:6501614 NCBI chr 4:146,532,958...146,558,425
Ensembl chr 4:146,533,953...146,557,889
JBrowse link
G Ttll8 tubulin tyrosine ligase like 8 located_in ISO (MGI:3850271|PMID:19524510), (MGI:6501614|PMID:33414192) RGD PMID:19524510 PMID:33414192 MGI:3850271 MGI:6501614 NCBI chr 7:120,000,638...120,046,556 JBrowse link
G Tubb4a tubulin, beta 4A class IVa located_in ISO (PMID:12475942) RGD PMID:12475942 NCBI chr 9:1,917,841...1,925,286
Ensembl chr 9:1,917,845...1,925,291
JBrowse link
G Tulp3 TUB like protein 3 located_in ISO (MGI:3841503|PMID:19286674) RGD PMID:19286674 MGI:3841503 NCBI chr 4:161,590,478...161,632,514
Ensembl chr 4:161,590,479...161,632,149
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113
JBrowse link
G Wdr11 WD repeat domain 11 located_in ISO (MGI:6116377|PMID:29263200) RGD PMID:29263200 MGI:6116377 NCBI chr 1:184,165,260...184,210,834
Ensembl chr 1:184,165,571...184,210,846
JBrowse link
G Wdr35 WD repeat domain 35 located_in
is_active_in
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:4950635|PMID:21473986)
UniProt
RGD
PMID:21473986 PMID:21873635 GO_REF:0000024 MGI:4950635, RGD:13792537 NCBI chr 6:31,771,315...31,831,450
Ensembl chr 6:31,771,360...31,831,029
JBrowse link
distal portion of axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah9 dynein, axonemal, heavy chain 9 located_in ISO (PMID:26909801), (PMID:30471717)
(MGI:6503922|PMID:33347437)
RGD PMID:26909801 PMID:30471717 PMID:33347437 MGI:6503922 NCBI chr10:50,496,174...50,864,909
Ensembl chr10:50,497,688...50,864,949
JBrowse link
inner dynein arm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah1 dynein, axonemal, heavy chain 1 part_of IBA
ISO
PMID:21873635
(PMID:24360805)
RGD PMID:24360805 PMID:21873635 RGD:13792537 NCBI chr16:6,455,514...6,517,103
Ensembl chr16:6,456,002...6,518,350
JBrowse link
G Dnah12 dynein, axonemal, heavy chain 12 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:1,936,354...2,092,663
Ensembl chr16:1,937,817...2,092,664
JBrowse link
G Dnah2 dynein, axonemal, heavy chain 2 part_of ISO (PMID:30811583) RGD PMID:30811583 NCBI chr10:54,142,648...54,268,901
Ensembl chr10:54,142,737...54,267,298
JBrowse link
G Dnah7 dynein, axonemal, heavy chain 7 part_of IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:11877439)
Ensembl
RGD
PMID:11877439 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 9:54,960,235...55,266,529
Ensembl chr 9:54,960,440...55,262,297
JBrowse link
G Dnai3 dynein axonemal intermediate chain 3 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:234,947,910...235,006,173
Ensembl chr 2:234,929,677...235,006,173
JBrowse link
G Dnhd1 dynein heavy chain domain 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:159,990,785...160,077,990
Ensembl chr 1:159,990,438...160,074,858
JBrowse link
outer dynein arm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757
JBrowse link
G Cfap70 cilia and flagella associated protein 70 part_of ISO (PMID:31621862) RGD PMID:31621862 NCBI chr15:3,852,381...3,918,036
Ensembl chr15:3,852,509...3,918,014
JBrowse link
G Dnah17 dynein, axonemal, heavy chain 17 part_of ISO (PMID:31178125) RGD PMID:31178125 NCBI chr10:103,244,144...103,364,953
Ensembl chr10:103,249,363...103,364,901
JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 part_of ISO (PMID:11062149), (PMID:11788826), (PMID:16627867), (PMID:22499950)
(MGI:6147712|PMID:27353389)
RGD PMID:11062149 PMID:11788826 PMID:16627867 PMID:22499950 PMID:27353389 MGI:6147712 NCBI chr 2:78,937,788...79,255,551
Ensembl chr 2:78,937,800...79,254,890
JBrowse link
G Dnah8 dynein, axonemal, heavy chain 8 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:8,692,939...8,946,780
Ensembl chr20:8,692,963...8,946,772
JBrowse link
G Dnah9 dynein, axonemal, heavy chain 9 part_of ISO (MGI:6147712|PMID:27353389) RGD PMID:27353389 MGI:6147712 NCBI chr10:50,496,174...50,864,909
Ensembl chr10:50,497,688...50,864,949
JBrowse link
G Dnai1 dynein, axonemal, intermediate chain 1 part_of IBA
ISO
PMID:21873635
(PMID:11231901), (PMID:16858015)
RGD PMID:11231901 PMID:16858015 PMID:21873635 RGD:13792537 NCBI chr 5:56,730,179...56,800,926
Ensembl chr 5:56,730,179...56,800,925
JBrowse link
G Dnai2 dynein, axonemal, intermediate chain 2 part_of IBA
ISO
PMID:21873635
(PMID:18950741)
RGD PMID:18950741 PMID:21873635 RGD:13792537 NCBI chr10:99,759,966...99,793,379
Ensembl chr10:99,759,966...99,793,378
JBrowse link
G Dync1i2 dynein cytoplasmic 1 intermediate chain 2 part_of ISO (MGI:6147712|PMID:27353389) RGD PMID:27353389 MGI:6147712 NCBI chr 3:56,033,882...56,085,080
Ensembl chr 3:56,033,917...56,085,080
JBrowse link
G Nme8 NME/NM23 family member 8 part_of ISO
IEA
(PMID:17360648)
GO_REF:0000107
RGD
Ensembl
PMID:17360648 GO_REF:0000107 NCBI chr17:45,237,022...45,304,948
Ensembl chr17:45,238,120...45,304,948
JBrowse link
G Odad1 outer dynein arm docking complex subunit 1 part_of ISO
ISS
(PMID:23261303)
GO_REF:0000024
RGD
UniProt
PMID:23261303 GO_REF:0000024 NCBI chr 1:96,392,132...96,420,926
Ensembl chr 1:96,394,824...96,420,925
JBrowse link
outer dynein arm docking complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Odad4 outer dynein arm docking complex subunit 4 part_of ISO (PMID:27486780) RGD PMID:27486780 NCBI chr10:85,480,089...85,508,603
Ensembl chr10:85,480,094...85,508,603
JBrowse link
proximal portion of axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah11 dynein, axonemal, heavy chain 11 located_in ISO (PMID:26909801)
(MGI:6120222|PMID:26909801), (MGI:6503922|PMID:33347437)
RGD PMID:26909801 PMID:33347437 MGI:6120222 MGI:6503922 NCBI chr 6:138,839,175...139,155,554
Ensembl chr 6:138,839,177...139,155,536
JBrowse link
radial spoke term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap206 cilia and flagella associated protein 206 part_of ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:49,254,399...49,299,145
Ensembl chr 5:49,254,408...49,299,090
JBrowse link
G Rsph6a radial spoke head 6 homolog A part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:78,700,727...78,720,444
Ensembl chr 1:78,700,814...78,720,431
JBrowse link
G Rsph9 radial spoke head component 9 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:14,839,565...14,860,062
Ensembl chr 9:14,840,115...14,860,062
JBrowse link
radial spoke head term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rsph4a radial spoke head component 4A part_of ISO MGI:5882201 (MGI:5882054|PMID:26506310) RGD PMID:26506310 MGI:5882054 NCBI chr20:30,764,409...30,780,574
Ensembl chr20:30,764,409...30,780,574
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19676
      organelle 13088
        membrane-bounded organelle 11697
          cilium 722
            ciliary plasm 139
              axoneme + 137
Path 2
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19676
      intracellular anatomical structure 14364
        cytoplasm 11373
          cytoplasmic region 291
            plasma membrane bounded cell projection cytoplasm 248
              ciliary plasm 139
                axoneme + 137
paths to the root