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ONTOLOGY REPORT - ANNOTATIONS


Term:glycoprotein complex
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Accession:GO:0090665 term browser browse the term
Definition:A protein complex containing at least one glycosylated protein, may be held together by both covalent and noncovalent bonds.
Comment:An example is the Dictyostelium multi protein pspB complex, which is secreted from prespore vesicles and incorporated into the spore coat.


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dystroglycan complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dag1 dystroglycan 1 ISO
IBA
(MGI:MGI:2156962|PMID:11798066), (MGI:MGI:5882904|PMID:14622018)
PMID:21873635
RGD PMID:11798066, PMID:14622018, PMID:21873635 MGI:MGI:2156962, MGI:MGI:5882904, RGD:13792537 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Sgca sarcoglycan, alpha ISO (MGI:MGI:1352919|PMID:10678176) RGD PMID:10678176 MGI:MGI:1352919 NCBI chr10:82,770,905...82,785,142
Ensembl chr10:82,770,905...82,785,142
JBrowse link
G Sgcb sarcoglycan, beta ISO (MGI:MGI:1352919|PMID:10678176) RGD PMID:10678176 MGI:MGI:1352919 NCBI chr14:37,113,194...37,128,623
Ensembl chr14:37,113,210...37,128,737
JBrowse link
G Sgcd sarcoglycan, delta ISO (MGI:MGI:1352919|PMID:10678176) RGD PMID:10678176 MGI:MGI:1352919 NCBI chr10:32,062,946...32,471,454
Ensembl chr10:32,062,946...32,471,454
JBrowse link
G Sgcg sarcoglycan, gamma ISO (MGI:MGI:1352919|PMID:10678176) RGD PMID:10678176 MGI:MGI:1352919 NCBI chr15:41,549,330...41,595,275
Ensembl chr15:41,549,331...41,595,345
JBrowse link
dystrophin-associated glycoprotein complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07046866.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:10,125,070...10,125,252 JBrowse link
G Cav3 caveolin 3 ISO (PMID:10988290) RGD PMID:10988290 NCBI chr 4:144,382,945...144,398,919
Ensembl chr 4:144,382,945...144,398,917
JBrowse link
G Dag1 dystroglycan 1 IDA
ISO
(PMID:17993586) RGD PMID:17993586, PMID:15247274 RGD:1600063 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Dmd dystrophin IDA
ISO
(PMID:17993586)
(MGI:MGI:3758478|PMID:7890770)
RGD PMID:7890770, PMID:17993586, PMID:15247274 MGI:MGI:3758478, RGD:1600063 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Krt19 keratin 19 IDA RGD PMID:15247274 RGD:1600063 NCBI chr10:88,055,843...88,060,560
Ensembl chr10:88,055,841...88,060,561
JBrowse link
G Krt8 keratin 8 IDA RGD PMID:15247274 RGD:1600063 NCBI chr 7:143,596,511...143,603,745
Ensembl chr 7:143,596,511...143,603,803
JBrowse link
G Pgm5 phosphoglucomutase 5 ISO (MGI:MGI:3758478|PMID:7890770) RGD PMID:7890770 MGI:MGI:3758478 NCBI chr 1:242,582,591...242,765,837
Ensembl chr 1:242,582,642...242,765,807
JBrowse link
G Sgcb sarcoglycan, beta ISO (PMID:17993586) RGD PMID:17993586 NCBI chr14:37,113,194...37,128,623
Ensembl chr14:37,113,210...37,128,737
JBrowse link
G Sgcd sarcoglycan, delta ISO (PMID:17993586) RGD PMID:17993586 NCBI chr10:32,062,946...32,471,454
Ensembl chr10:32,062,946...32,471,454
JBrowse link
G Sgce sarcoglycan, epsilon ISO (PMID:17993586) RGD PMID:17993586 NCBI chr 4:29,726,140...29,769,902
Ensembl chr 4:29,726,146...29,778,039
JBrowse link
G Snta1 syntrophin, alpha 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:149,874,023...149,905,980
Ensembl chr 3:149,874,030...149,905,944
JBrowse link
G Sntb1 syntrophin, beta 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:95,395,417...95,670,093
Ensembl chr 7:95,397,113...95,669,809
JBrowse link
G Sntb2 syntrophin, beta 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:39,126,589...39,209,152
Ensembl chr19:39,126,589...39,209,152
JBrowse link
G Sntg1 syntrophin, gamma 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:10,118,901...10,493,094
Ensembl chr 5:10,178,302...10,493,094
JBrowse link
G Sntg2 syntrophin, gamma 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:49,123,084...49,324,530
Ensembl chr 6:49,123,084...49,324,450
JBrowse link
G Sspn sarcospan IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:180,291,389...180,325,799
Ensembl chr 4:180,291,389...180,324,408
JBrowse link
G Utrn utrophin ISO (MGI:MGI:3758478|PMID:7890770) RGD PMID:7890770 MGI:MGI:3758478 NCBI chr 1:6,451,809...6,970,040
Ensembl chr 1:6,451,810...6,970,040
JBrowse link
sarcoglycan complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07025986.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:57,821,902...57,823,309 JBrowse link
G Sgca sarcoglycan, alpha ISO
IBA
(MGI:MGI:3654235|PMID:16524571)
PMID:21873635
RGD PMID:16524571, PMID:21873635 MGI:MGI:3654235, RGD:13792537 NCBI chr10:82,770,905...82,785,142
Ensembl chr10:82,770,905...82,785,142
JBrowse link
G Sgcb sarcoglycan, beta ISO (MGI:MGI:3654235|PMID:16524571) RGD PMID:16524571 MGI:MGI:3654235 NCBI chr14:37,113,194...37,128,623
Ensembl chr14:37,113,210...37,128,737
JBrowse link
G Sgcd sarcoglycan, delta IBA
ISO
PMID:21873635
(MGI:MGI:2388221|PMID:12189167), (MGI:MGI:3654235|PMID:16524571)
RGD PMID:12189167, PMID:16524571, PMID:21873635 MGI:MGI:2388221, MGI:MGI:3654235, RGD:13792537 NCBI chr10:32,062,946...32,471,454
Ensembl chr10:32,062,946...32,471,454
JBrowse link
G Sgce sarcoglycan, epsilon IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 4:29,726,140...29,769,902
Ensembl chr 4:29,726,146...29,778,039
JBrowse link
G Sgcg sarcoglycan, gamma IBA
ISO
PMID:21873635
(MGI:MGI:2388221|PMID:12189167), (MGI:MGI:3654235|PMID:16524571)
RGD PMID:12189167, PMID:16524571, PMID:21873635 MGI:MGI:2388221, MGI:MGI:3654235, RGD:13792537 NCBI chr15:41,549,330...41,595,275
Ensembl chr15:41,549,331...41,595,345
JBrowse link
G Sgcz sarcoglycan zeta ISO (MGI:MGI:2388221|PMID:12189167) RGD PMID:12189167 MGI:MGI:2388221 NCBI chr16:57,136,433...58,206,350 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20609
    protein-containing complex 6093
      glycoprotein complex 21
        alphaIIb-beta3 integrin-CD9-CD47-platelet glycoprotein Ib complex 0
        dystrophin-associated glycoprotein complex + 21
        glycoprotein Ib-IX-V complex 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.