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ONTOLOGY REPORT - ANNOTATIONS

Term:sensory organ morphogenesis
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Accession:GO:0090596 term browser browse the term
Definition:Morphogenesis of a sensory organ. A sensory organ is defined as a tissue or set of tissues that work together to receive and transmit signals from external or internal stimuli. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.


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auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir96 microRNA 96 acts_upstream_of_or_within ISO MGI:4354110 (MGI:4353582|PMID:19363478) RGD PMID:19363478 MGI:4353582 NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2663662|MGI:2663669 (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:2139764 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2145950|MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO MGI:4417931 (MGI:4413621|PMID:19936227) RGD PMID:19936227 MGI:4413621 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within ISO MGI:5558098 (MGI:5544506|PMID:24302887) RGD PMID:24302887 MGI:5544506 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113 		JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1856799 (MGI:3709803|PMID:11875276) RGD PMID:11875276 MGI:3709803 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665 		JBrowse link
G Cdh23 cadherin-related 23 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1856228|MGI:1856681|MGI:1891428|MGI:2154548|MGI:2154549 (MGI:1929001|PMID:11138008), (MGI:1933915|PMID:11322776), (MGI:3526751|PMID:15537665), (MGI:3625226|PMID:12121736), (MGI:3686545|PMID:17050716), (MGI:5468200|PMID:23217710), (MGI:75953|PMID:7610888), (MGI:81497|PMID:8790740), (MGI:86134|PMID:9039475)
GO_REF:0000107		 RGD
Ensembl		 PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... GO_REF:0000107 MGI:1929001 MGI:1933915 MGI:3526751 MGI:3625226 MGI:3686545 MGI:5468200 MGI:75953 MGI:81497 MGI:86134 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419 		JBrowse link
G Clic5 chloride intracellular channel 5 acts_upstream_of_or_within ISO MGI:3663254 (MGI:3663248|PMID:17021174) RGD PMID:17021174 MGI:3663248 NCBI chr 9:16,710,980...16,813,427
Ensembl chr 9:16,710,980...16,813,427 		JBrowse link
G Clrn1 clarin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3850171 (MGI:3849925|PMID:19414487), (MGI:4353469|PMID:19423712)
GO_REF:0000107		 RGD
Ensembl		 PMID:19414487 PMID:19423712 GO_REF:0000107 MGI:3849925 MGI:4353469 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948 		JBrowse link
G Clrn2 clarin 2 involved_in ISO (MGI:6810803|PMID:33496845) RGD PMID:33496845 MGI:6810803 NCBI chr14:65,656,550...65,666,193
Ensembl chr14:65,656,550...65,666,193 		JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 acts_upstream_of_or_within ISO MGI:2139535|MGI:6281113|MGI:6281114 (MGI:6278501|PMID:30380417) RGD PMID:30380417 MGI:6278501 NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094 		JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 acts_upstream_of_or_within ISO MGI:3055797|MGI:3718054 (MGI:3578102|PMID:15905332), (MGI:3759710|PMID:17876667), (MGI:5468200|PMID:23217710) RGD PMID:15905332 PMID:17876667 PMID:23217710 MGI:3578102 MGI:3759710 MGI:5468200 NCBI chr20:6,632,362...6,642,534
Ensembl chr20:6,632,362...6,642,532 		JBrowse link
G Myo3a myosin IIIA involved_in ISO MGI:2448580 (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr17:84,554,785...84,604,748
Ensembl chr17:84,543,552...84,759,042 		JBrowse link
G Myo3b myosin IIIB involved_in ISO MGI:2183924 (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr 3:54,873,704...55,226,189
Ensembl chr 3:54,820,251...55,227,373 		JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1860092|MGI:2155422 (MGI:2156358|PMID:11753415), (MGI:3625226|PMID:12121736), (MGI:3686545|PMID:17050716) RGD PMID:11753415 PMID:12121736 PMID:17050716 MGI:2156358 MGI:3625226 MGI:3686545 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 acts_upstream_of_or_within ISO MGI:3526430 (MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:5578076 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598 		JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:1855958|MGI:1856394|MGI:1856396|MGI:1890219|MGI:2151877|MGI:3505691 (MGI:1928787|PMID:10978835), (MGI:3526751|PMID:15537665), (MGI:3619110|PMID:11124469), (MGI:3654702|PMID:16887306), (MGI:5468200|PMID:23217710) RGD PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 MGI:1928787 MGI:3526751 MGI:3619110 MGI:3654702 MGI:5468200 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719 		JBrowse link
G Pdzd7 PDZ domain containing 7 acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:4433578 (MGI:5565635|PMID:24334608)
PMID:21873635		 RGD PMID:24334608 PMID:21873635 MGI:5565635, RGD:13792537 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839 		JBrowse link
G Pls1 plastin 1 involved_in ISO (MGI:5608770|PMID:25124451) RGD PMID:25124451 MGI:5608770 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO
ISS		 (MGI:6193260|PMID:29961578)
GO_REF:0000024		 RGD
UniProt		 PMID:29961578 GO_REF:0000024 MGI:6193260 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISO (MGI:5789047|PMID:27269051) RGD PMID:27269051 MGI:5789047 NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092 		JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:2139764 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2145950|MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699 		JBrowse link
G Sod1 superoxide dismutase 1 acts_upstream_of_or_within
involved_in		 ISO
ISS		 MGI:1857872 (MGI:1344578|PMID:10466888), (MGI:3700629|PMID:10464373)
GO_REF:0000024		 RGD
UniProt		 PMID:10464373 PMID:10466888 GO_REF:0000024 MGI:1344578 MGI:3700629 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249 		JBrowse link
G Strc stereocilin acts_upstream_of_or_within
involved_in		 ISO MGI:3818633 (MGI:3818235|PMID:18849963)
(MGI:5430850|PMID:21165971)		 RGD PMID:18849963 PMID:21165971 MGI:3818235 MGI:5430850 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134 		JBrowse link
G Tprn taperin involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2685697 (MGI:6278501|PMID:30380417)		 RGD PMID:30380417 PMID:21873635 MGI:6278501, RGD:13792537 NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642 		JBrowse link
G Triobp TRIO and F-actin binding protein acts_upstream_of_or_within ISO MGI:4881773 (MGI:4881391|PMID:20510926) RGD PMID:20510926 MGI:4881391 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474 		JBrowse link
G Whrn whirlin involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 GO_REF:0000107
PMID:21873635
MGI:4432119 (MGI:5796227|PMID:27117407)		 Ensembl
RGD		 PMID:27117407 PMID:21873635 GO_REF:0000107 MGI:5796227, RGD:13792537 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223 		JBrowse link
camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 acts_upstream_of_or_within ISO MGI:1857807 (MGI:2180433|PMID:11891232) RGD PMID:11891232 MGI:2180433 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690 		JBrowse link
G Aqp5 aquaporin 5 acts_upstream_of_or_within ISO MGI:2150059 (MGI:2180433|PMID:11891232) RGD PMID:11891232 MGI:2180433 NCBI chr 7:130,722,675...130,726,207
Ensembl chr 7:130,721,748...130,726,209 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:88180 (MGI:1095762|PMID:9268572) RGD PMID:9268572 MGI:1095762 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO MGI:1857654|MGI:2136986 (MGI:3610441|PMID:16154126), (MGI:3701027|PMID:16854970) RGD PMID:16154126 PMID:16854970 MGI:3610441 MGI:3701027 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Col8a1 collagen type VIII alpha 1 chain acts_upstream_of_or_within ISO MGI:88464 (MGI:3587134|PMID:16051690) RGD PMID:16051690 MGI:3587134 NCBI chr11:42,776,851...42,906,432
Ensembl chr11:42,777,628...42,906,424 		JBrowse link
G Col8a2 collagen type VIII alpha 2 chain acts_upstream_of_or_within ISO MGI:88463 (MGI:3587134|PMID:16051690) RGD PMID:16051690 MGI:3587134 NCBI chr 5:138,586,201...138,613,627
Ensembl chr 5:138,585,999...138,612,850 		JBrowse link
G Ephb1 Eph receptor B1 acts_upstream_of_or_within ISO MGI:2677305 (MGI:2675767|PMID:12971893) RGD PMID:12971893 MGI:2675767 NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839 		JBrowse link
G Ephb2 Eph receptor B2 acts_upstream_of_or_within ISO MGI:2149765 (MGI:2675767|PMID:12971893) RGD PMID:12971893 MGI:2675767 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059 		JBrowse link
G Fat1 FAT atypical cadherin 1 involved_in ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107 		JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO MGI:2449673 (MGI:3581514|PMID:15976303) RGD PMID:15976303 MGI:3581514 NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (MGI:52587|PMID:8387379) RGD PMID:8387379 MGI:52587 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Grcc10 gene rich cluster, C10 gene involved_in ISO (PMID:23453665), (PMID:23633300), (PMID:24798461) RGD PMID:23453665 PMID:23633300 PMID:24798461 NCBI chr 4:157,551,276...157,552,924 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within ISO MGI:103223 (MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:5429122 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:3827087|PMID:19000668) RGD PMID:19000668 MGI:3827087 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Mfn2 mitofusin 2 acts_upstream_of_or_within ISO MGI:1861626 (MGI:3589043|PMID:16104381) RGD PMID:16104381 MGI:3589043 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:3605480 (MGI:3604842|PMID:15728677) RGD PMID:15728677 MGI:3604842 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
MGI:1857444 (MGI:66069|PMID:7926784)		 Ensembl
HGNC-UCL
RGD		 PMID:7926784 GO_REF:0000024 GO_REF:0000107 MGI:66069 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Ring1 ring finger protein 1 acts_upstream_of_or_within ISO MGI:99150 (MGI:3628673|PMID:16624538) RGD PMID:16624538 MGI:3628673 NCBI chr20:4,830,120...4,833,623
Ensembl chr20:4,830,053...4,833,620 		JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (MGI:3693412|PMID:17003410) RGD PMID:17003410 MGI:3693412 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Tenm3 teneurin transmembrane protein 3 involved_in ISO (PMID:22766609) RGD PMID:22766609 NCBI chr16:41,251,909...43,978,594
Ensembl chr16:41,252,182...43,978,594 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:1931048|MGI:2387296 (MGI:3607459|PMID:16251428) RGD PMID:16251428 MGI:3607459 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO MGI:106918|MGI:2136645 (MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:5429122 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377 		JBrowse link
G Yy1 YY1 transcription factor acts_upstream_of_or_within ISO MGI:1101770 (MGI:3628673|PMID:16624538) RGD PMID:16624538 MGI:3628673 NCBI chr 6:127,706,739...127,731,907
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dscam DS cell adhesion molecule involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415 		JBrowse link
G Prom1 prominin 1 involved_in ISO
IBA		 (MGI:3838023|PMID:19228982)
PMID:21873635
(PMID:18654668)		 RGD PMID:18654668 PMID:19228982 PMID:21873635 MGI:3838023, RGD:13792537 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 acts_upstream_of_or_within ISO (MGI:4437581|PMID:20300562) RGD PMID:20300562 MGI:4437581 NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175 		JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 involved_in ISO (MGI:5693671|PMID:26287463) RGD PMID:26287463 MGI:5693671 NCBI chr10:98,824,923...99,102,590
Ensembl chr10:98,828,348...99,101,759 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO GO:0060219 (MGI:2680888|PMID:12808454) RGD PMID:12808454 MGI:2680888 NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO MGI:5140723 (MGI:5014119|PMID:21646512) RGD PMID:21646512 MGI:5014119 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418 		JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
ciliary body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxe3 forkhead box E3 involved_in ISO
ISS		 (MGI:3703484|PMID:17064680) RGD PMID:17064680 PMID:17064680 MGI:3703484, RGD:10047226 NCBI chr 5:128,445,594...128,446,454
Ensembl chr 5:128,445,594...128,446,454 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3692444 (MGI:5492288|PMID:23676271)		 Ensembl
RGD		 PMID:23676271 GO_REF:0000107 MGI:5492288 NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209 		JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3617328 (MGI:5492288|PMID:23676271)
GO_REF:0000107		 RGD
Ensembl		 PMID:23676271 GO_REF:0000107 MGI:5492288 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within
involved_in		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5285004|PMID:21856951)		 UniProt
Ensembl
RGD		 PMID:21856951 GO_REF:0000024 GO_REF:0000107 MGI:5285004 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO MGI:2136645 (MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:5429122 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377 		JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phactr4 phosphatase and actin regulator 4 involved_in ISO (MGI:3719969|PMID:17609112) RGD PMID:17609112 MGI:3719969 NCBI chr 5:144,549,350...144,621,259
Ensembl chr 5:144,549,363...144,620,865 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO
ISS		 (MGI:3797299|PMID:18423449)
GO_REF:0000024		 RGD
UniProt		 PMID:18423449 GO_REF:0000024 MGI:3797299 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354 		JBrowse link
cochlea morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 acts_upstream_of_or_within ISO MGI:1915838 (MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:3814781 NCBI chr 7:70,122,474...70,132,756
Ensembl chr 7:70,122,474...70,132,756 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO MGI:106613 (MGI:3589836|PMID:16116426) RGD PMID:16116426 MGI:3589836 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within ISO MGI:108100|MGI:94941 (MGI:3589836|PMID:16116426), (MGI:3821448|PMID:19008950) RGD PMID:16116426 PMID:19008950 MGI:3589836 MGI:3821448 NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820 		JBrowse link
G Dvl3 dishevelled segment polarity protein 3 acts_upstream_of_or_within ISO MGI:106613|MGI:2135272 (MGI:3821448|PMID:19008950) RGD PMID:19008950 MGI:3821448 NCBI chr11:80,365,446...80,382,641
Ensembl chr11:80,366,117...80,382,462 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:1857803 (MGI:1335261|PMID:10072433) RGD PMID:10072433 MGI:1335261 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Frzb frizzled-related protein acts_upstream_of_or_within ISO MGI:98958 (MGI:3714704|PMID:17433286) RGD PMID:17433286 MGI:3714704 NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208 		JBrowse link
G Fzd2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2135272 (MGI:4837757|PMID:20940229)		 Ensembl
RGD		 PMID:20940229 GO_REF:0000107 MGI:4837757 NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (MGI:3709667|PMID:17395647) RGD PMID:17395647 MGI:3709667 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Grhl3 grainyhead-like transcription factor 3 acts_upstream_of_or_within ISO MGI:2135272 (MGI:4819429|PMID:20643356) RGD PMID:20643356 MGI:4819429 NCBI chr 5:147,774,160...147,806,338
Ensembl chr 5:147,774,160...147,806,160 		JBrowse link
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Hpn hepsin involved_in ISS
ISO		 GO_REF:0000024
(MGI:5306554|PMID:20683358)		 UniProt
RGD		 PMID:20683358 GO_REF:0000024 MGI:5306554 NCBI chr 1:86,337,085...86,352,785
Ensembl chr 1:86,337,087...86,352,811 		JBrowse link
G Myo3a myosin IIIA involved_in ISO (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr17:84,554,785...84,604,748
Ensembl chr17:84,543,552...84,759,042 		JBrowse link
G Myo3b myosin IIIB involved_in ISO (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr 3:54,873,704...55,226,189
Ensembl chr 3:54,820,251...55,227,373 		JBrowse link
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571 		JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
UniProtKB:Q00288 (MGI:4822275|PMID:20727173), (MGI:84247|PMID:8951055)
MGI:1857673 (MGI:3702803|PMID:16916509)		 UniProt
RGD		 PMID:8951055 PMID:16916509 PMID:20727173 GO_REF:0000024 MGI:3702803 MGI:4822275 MGI:84247 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pou3f4 POU class 3 homeobox 4 involved_in ISO
ISS		 UniProtKB:P70323 (MGI:5284768|PMID:18231833)
GO_REF:0000024		 RGD
UniProt		 PMID:18231833 GO_REF:0000024 MGI:5284768 NCBI chr  X:75,858,646...75,859,923
Ensembl chr  X:75,858,646...75,859,923 		JBrowse link
G Ptk7 protein tyrosine kinase 7 acts_upstream_of_or_within ISO MGI:3640803 (MGI:4830023|PMID:20704721) RGD PMID:20704721 MGI:4830023 NCBI chr 9:14,352,155...14,418,494
Ensembl chr 9:14,351,202...14,418,494 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2663662|MGI:2663669 (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:2655195 (MGI:2671031|PMID:12874121) RGD PMID:12874121 MGI:2671031 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2385468|MGI:3841145 (MGI:4454502|PMID:20346939)		 UniProt
RGD		 PMID:20346939 GO_REF:0000024 MGI:4454502 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2179136 (MGI:3765363|PMID:17825816)
UniProtKB:P62515 (MGI:5284768|PMID:18231833)		 UniProt
RGD		 PMID:17825816 PMID:18231833 GO_REF:0000024 MGI:3765363 MGI:5284768 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within ISO MGI:3044915 (MGI:3788971|PMID:18353863) RGD PMID:18353863 MGI:3788971 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058 		JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO (MGI:6710296|PMID:33795231) RGD PMID:33795231 MGI:6710296 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529 		JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592 		JBrowse link
G Tshr thyroid stimulating hormone receptor acts_upstream_of_or_within ISO (MGI:3652455|PMID:10575115) RGD PMID:10575115 MGI:3652455 NCBI chr 6:110,341,585...110,475,297
Ensembl chr 6:110,341,581...110,474,538 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:108100|MGI:1857642|MGI:1888513|MGI:2655333|MGI:98958 (MGI:3589836|PMID:16116426), (MGI:3714704|PMID:17433286), (MGI:3814781|PMID:18606138), (MGI:3821448|PMID:19008950), (MGI:4819429|PMID:20643356), (MGI:4837757|PMID:20940229) RGD PMID:16116426 PMID:17433286 PMID:18606138 PMID:19008950 PMID:20643356 More... MGI:3589836 MGI:3714704 MGI:3814781 MGI:3821448 MGI:4819429 MGI:4837757 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1857617|MGI:2135272 (MGI:3714704|PMID:17433286) RGD PMID:17433286 MGI:3714704 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861230 (MGI:5294688|PMID:21980308)		 Ensembl
RGD		 PMID:21980308 GO_REF:0000107 MGI:5294688 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
cone retinal bipolar cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (MGI:6219748|PMID:26607664) RGD PMID:26607664 MGI:6219748 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO MGI:2676199 (MGI:3655326|PMID:9071226) RGD PMID:9071226 MGI:3655326 NCBI chr  X:5,796,487...5,820,934
Ensembl chr  X:5,796,487...5,820,934 		JBrowse link
ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:1862038 (MGI:1861752|PMID:10932191) RGD PMID:10932191 MGI:1861752 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Gjb6 gap junction protein, beta 6 acts_upstream_of_or_within ISO MGI:2447863 (MGI:2447513|PMID:12490528) RGD PMID:12490528 MGI:2447513 NCBI chr15:31,284,562...31,295,010
Ensembl chr15:31,284,419...31,294,582 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:8291537) RGD PMID:8291537 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2179191 (MGI:3050165|PMID:15190012)		 UniProt
RGD		 PMID:15190012 GO_REF:0000024 MGI:3050165 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within ISO MGI:5315747 (MGI:5314316|PMID:22228095) RGD PMID:22228095 MGI:5314316 NCBI chr14:43,042,474...43,106,337
Ensembl chr14:43,042,478...43,106,288 		JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) RGD PMID:17273977 NCBI chr 8:58,549,743...58,568,861
Ensembl chr 8:58,549,736...58,568,860 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17070479) RGD PMID:17070479 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO MGI:1857654 (MGI:1332362|PMID:10049573) RGD PMID:10049573 MGI:1332362 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:97490 (MGI:3807101|PMID:18653562) RGD PMID:18653562 MGI:3807101 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Cryaa crystallin, alpha A acts_upstream_of_or_within ISO MGI:3777403 (MGI:3775669|PMID:18056999) RGD PMID:18056999 MGI:3775669 NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349 		JBrowse link
G Foxf2 forkhead box F2 involved_in ISO (MGI:5297296|PMID:22022403) RGD PMID:22022403 MGI:5297296 NCBI chr17:32,835,730...32,842,555
Ensembl chr17:32,836,777...32,842,176 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO
IEA		 (MGI:3826935|PMID:18832390)
GO_REF:0000107		 RGD
Ensembl		 PMID:18832390 GO_REF:0000107 MGI:3826935 NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4818711|PMID:20579985)		 Ensembl
RGD		 PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223 		JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within ISO MGI:3578529 (MGI:6094959|PMID:28778798) RGD PMID:28778798 MGI:6094959 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Ift172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2682066 (MGI:6094959|PMID:28778798)		 Ensembl
RGD		 PMID:28778798 GO_REF:0000107 MGI:6094959 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191|MGI:4415718 (MGI:3823171|PMID:18985738), (MGI:4413396|PMID:19653321) RGD PMID:18985738 PMID:19653321 MGI:3823171 MGI:4413396 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1306784 (MGI:3807101|PMID:18653562)
GO_REF:0000107		 RGD
Ensembl		 PMID:18653562 GO_REF:0000107 MGI:3807101 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO (MGI:3487212|PMID:15459098) RGD PMID:15459098 MGI:3487212 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:2176682 (MGI:1313057|PMID:9811866) RGD PMID:9811866 MGI:1313057 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Th tyrosine hydroxylase involved_in ISO (MGI:3617102|PMID:16445854) RGD PMID:16445854 MGI:3617102 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1857515 (MGI:3790562|PMID:18436818)
GO_REF:0000107		 RGD
Ensembl		 PMID:18436818 GO_REF:0000107 MGI:3790562 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
embryonic eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 acts_upstream_of_or_within ISO MGI:1861722 (MGI:3608158|PMID:16207763), (MGI:3624188|PMID:16611695) RGD PMID:16207763 PMID:16611695 MGI:3608158 MGI:3624188 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 acts_upstream_of_or_within ISO MGI:1353450|MGI:3043947 (MGI:3608158|PMID:16207763), (MGI:3624188|PMID:16611695) RGD PMID:16207763 PMID:16611695 MGI:3608158 MGI:3624188 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 involved_in ISO (PMID:25406291) RGD PMID:25406291 NCBI chr14:102,610,813...102,690,027
Ensembl chr14:102,610,908...102,690,018 		JBrowse link
G Fbn1 fibrillin 1 involved_in ISO (PMID:25406291) RGD PMID:25406291 NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889 		JBrowse link
G Fbn2 fibrillin 2 involved_in ISO (PMID:25406291) RGD PMID:25406291 NCBI chr18:51,499,737...51,703,976
Ensembl chr18:51,499,737...51,703,976 		JBrowse link
G Foxl2 forkhead box L2 acts_upstream_of_or_within ISO MGI:3044226 (MGI:3043431|PMID:15056605) RGD PMID:15056605 MGI:3043431 NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427 		JBrowse link
G Mfap2 microfibril associated protein 2 involved_in IBA
ISO		 PMID:21873635
(PMID:25406291)		 RGD PMID:25406291 PMID:21873635 RGD:13792537 NCBI chr 5:153,312,068...153,320,266
Ensembl chr 5:153,314,711...153,320,259 		JBrowse link
G Mfap5 microfibril associated protein 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:155,727,925...155,750,458
Ensembl chr 4:155,727,925...155,750,458 		JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within ISO MGI:97858 (MGI:3608158|PMID:16207763) RGD PMID:16207763 MGI:3608158 NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO MGI:97857 (MGI:3608158|PMID:16207763) RGD PMID:16207763 MGI:3608158 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177 		JBrowse link
G Vax2 ventral anterior homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2159246 (MGI:1349226|PMID:10595508), (MGI:2157790|PMID:11830579)
GO_REF:0000107		 RGD
Ensembl		 PMID:10595508 PMID:11830579 GO_REF:0000107 MGI:1349226 MGI:2157790 NCBI chr 4:116,195,576...116,219,597
Ensembl chr 4:116,195,528...116,219,594 		JBrowse link
embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2653120 (MGI:4422144|PMID:19754878)		 Ensembl
RGD		 PMID:19754878 GO_REF:0000107 MGI:4422144 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in ISO
IEA		 (MGI:4818711|PMID:20579985)
GO_REF:0000107		 RGD
Ensembl		 PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISO
ISS		 (MGI:3772525|PMID:18094249)
GO_REF:0000024		 RGD
UniProt		 PMID:18094249 GO_REF:0000024 MGI:3772525 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:4415718 (MGI:4413396|PMID:19653321) RGD PMID:19653321 MGI:4413396 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:12692551)
(MGI:2658694|PMID:12692551)		 RGD PMID:12692551 MGI:2658694 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:1344892|PMID:10469643) RGD PMID:10469643 MGI:1344892 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat1 FAT atypical cadherin 1 involved_in ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107 		JBrowse link
eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col5a1 collagen type V alpha 1 chain involved_in IEA
ISO		 GO_REF:0000107
(PMID:16431952)		 Ensembl
RGD		 PMID:16431952 GO_REF:0000107 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588 		JBrowse link
G Col5a2 collagen type V alpha 2 chain involved_in ISO (PMID:16431952) RGD PMID:16431952 NCBI chr 9:47,448,736...47,598,396
Ensembl chr 9:47,448,736...47,598,154 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:2388397 (MGI:2138055|PMID:11456441) RGD PMID:11456441 MGI:2138055 NCBI chr17:4,482,014...4,485,155 JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:8291537) RGD PMID:8291537 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 IMP RGD PMID:22940085 RGD:10043154 NCBI chr 5:2,840,801...3,084,451
Ensembl chr 5:2,840,765...3,084,929 		JBrowse link
eye photoreceptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISO (MGI:4437526|PMID:20081859) RGD PMID:20081859 MGI:4437526 NCBI chr 1:15,768,047...15,886,744
Ensembl chr 1:15,762,462...15,891,041 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO MGI:2676366 (MGI:2675211|PMID:12915475), (MGI:4849309|PMID:21052544) RGD PMID:12915475 PMID:21052544 MGI:2675211 MGI:4849309 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261 		JBrowse link
G Dzank1 double zinc ribbon and ankyrin repeat domains 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:131,855,890...131,908,217
Ensembl chr 3:131,852,552...131,908,156 		JBrowse link
G Fscn2 fascin actin-bundling protein 2, retinal acts_upstream_of_or_within ISO MGI:3612338 (MGI:3610644|PMID:16043865) RGD PMID:16043865 MGI:3610644 NCBI chr10:105,634,783...105,641,322
Ensembl chr10:105,634,783...105,641,322 		JBrowse link
G Gabrr2 gamma-aminobutyric acid type A receptor subunit rho 2 NOT|acts_upstream_of_or_within ISO MGI:2446461 (MGI:2179933|PMID:12019334) RGD PMID:12019334 MGI:2179933 NCBI chr 5:47,445,280...47,489,929
Ensembl chr 5:47,452,150...47,489,809 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within ISO MGI:2152779 (MGI:3609280|PMID:16249514) RGD PMID:16249514 MGI:3609280 NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gngt1 G protein subunit gamma transducin 1 acts_upstream_of_or_within ISO MGI:3783323 (MGI:3778702|PMID:18367617) RGD PMID:18367617 MGI:3778702 NCBI chr 4:32,006,267...32,009,252
Ensembl chr 4:32,006,267...32,009,252 		JBrowse link
G Mfrp membrane frizzled-related protein acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 8:44,445,636...44,450,859
Ensembl chr 8:44,445,697...44,450,859 		JBrowse link
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 8:60,365,581...60,373,383
Ensembl chr 8:60,366,124...60,373,163 		JBrowse link
G Olfm3 olfactomedin 3 IDA RGD PMID:12019210 RGD:633402 NCBI chr 2:202,729,610...202,952,120
Ensembl chr 2:202,729,936...202,952,112 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1856158 (MGI:2654287|PMID:12648492)
GO_REF:0000107		 RGD
Ensembl		 PMID:12648492 GO_REF:0000107 MGI:2654287 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Pdgfb platelet derived growth factor subunit B acts_upstream_of_or_within ISO MGI:2670574 (MGI:5607451|PMID:25224828) RGD PMID:25224828 MGI:5607451 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO MGI:3605621|MGI:3608904|MGI:4881674 (MGI:4454584|PMID:20463215) RGD PMID:20463215 MGI:4454584 NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488 		JBrowse link
G Prkci protein kinase C, iota acts_upstream_of_or_within ISO MGI:3526850|MGI:3608904 (MGI:3607414|PMID:16267237) RGD PMID:16267237 MGI:3607414 NCBI chr 2:112,321,919...112,382,305
Ensembl chr 2:112,321,929...112,382,352 		JBrowse link
G Psen1 presenilin 1 NAS RGD PMID:12736250 RGD:724403 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Rbp3 retinol binding protein 3 NAS RGD PMID:7916695 RGD:633871 NCBI chr16:9,267,538...9,276,006
Ensembl chr16:9,267,538...9,276,006 		JBrowse link
G Rdh13 retinol dehydrogenase 13 acts_upstream_of_or_within ISO MGI:5467544 (MGI:5462166|PMID:22605914) RGD PMID:22605914 MGI:5462166 NCBI chr 1:69,373,014...69,401,454
Ensembl chr 1:69,373,113...69,400,908 		JBrowse link
G Rorb RAR-related orphan receptor B involved_in ISS
ISO		 GO_REF:0000024
(MGI:3652638|PMID:16574740)		 UniProt
RGD		 PMID:16574740 GO_REF:0000024 MGI:3652638 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator acts_upstream_of_or_within ISO MGI:2386674 (MGI:2654998|PMID:12651948) RGD PMID:12651948 MGI:2654998 NCBI chr  X:12,566,447...12,628,171
Ensembl chr  X:12,566,645...12,747,882 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 acts_upstream_of_or_within ISO MGI:2655714 (MGI:2654998|PMID:12651948) RGD PMID:12651948 MGI:2654998 NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605 		JBrowse link
G Th tyrosine hydroxylase involved_in ISO (MGI:3617102|PMID:16445854) RGD PMID:16445854 MGI:3617102 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767 		JBrowse link
G Tulp1 TUB like protein 1 involved_in ISO (MGI:4397555|PMID:19218615) RGD PMID:19218615 MGI:4397555 NCBI chr20:6,412,170...6,424,312
Ensembl chr20:6,412,171...6,424,073 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:1931048|MGI:2387296 (MGI:3607459|PMID:16251428) RGD PMID:16251428 MGI:3607459 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 involved_in ISO (MGI:3614720|PMID:16465590) RGD PMID:16465590 MGI:3614720 NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869 		JBrowse link
G Ppp2r3a protein phosphatase 2, regulatory subunit B'', alpha involved_in ISO UniProtKB:A0A803JG39 (PMID:15687260) RGD PMID:15687260 NCBI chr 8:101,703,512...101,841,530
Ensembl chr 8:101,704,778...101,841,502 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:2178753 (MGI:2680889|PMID:14625556) RGD PMID:14625556 MGI:2680889 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
fungiform papilla formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:3696593|PMID:17128274)		 Ensembl
RGD		 PMID:17128274 GO_REF:0000107 MGI:3696593 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO UniProtKB:P70288 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111 		JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO UniProtKB:O09106 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609 		JBrowse link
G Shh sonic hedgehog signaling molecule IMP RGD PMID:15581865 RGD:1580345 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
fungiform papilla morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IMP RGD PMID:15581865 RGD:1580345 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:5448822|PMID:21978088) RGD PMID:21978088 MGI:5448822 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5448822|PMID:21978088) RGD PMID:21978088 MGI:5448822 NCBI chr 6:91,802,328...91,816,062
Ensembl chr 6:91,802,329...91,815,992 		JBrowse link
inner ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:88141 (MGI:3622851|PMID:11921339) RGD PMID:11921339 MGI:3622851 NCBI chr10:61,262,516...61,461,331
Ensembl chr10:61,262,516...61,461,505 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3043947 (MGI:5488831|PMID:23536097)		 Ensembl
RGD		 PMID:23536097 GO_REF:0000107 MGI:5488831 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983|MGI:2155984 (MGI:3525036|PMID:15543141), (MGI:3607238|PMID:16145671) RGD PMID:15543141 PMID:16145671 MGI:3525036 MGI:3607238 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (MGI:1275896|PMID:9668038) RGD PMID:9668038 MGI:1275896 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 NOT|involved_in ISO
ISS		 (MGI:2669353|PMID:12782355)
(PMID:19639346)
GO_REF:0000024		 RGD
UniProt		 PMID:12782355 PMID:19639346 GO_REF:0000024 MGI:2669353 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475 		JBrowse link
G Atp8a2 ATPase phospholipid transporting 8A2 involved_in ISO (MGI:5574432|PMID:24413176) RGD PMID:24413176 MGI:5574432 NCBI chr15:33,817,309...34,350,193
Ensembl chr15:33,819,755...34,350,223 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:107771 (MGI:3622851|PMID:11921339) RGD PMID:11921339 MGI:3622851 NCBI chr20:13,471,679...13,596,497
Ensembl chr20:13,471,668...13,597,016 		JBrowse link
G Cdh23 cadherin-related 23 acts_upstream_of_or_within ISO MGI:1856229|MGI:1856681|MGI:2665714 (MGI:3579755|PMID:15925194), (MGI:75953|PMID:7610888) RGD PMID:7610888 PMID:15925194 MGI:3579755 MGI:61210 MGI:75953 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419 		JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO MGI:1862019|MGI:2668337 (MGI:2667273|PMID:12842012) RGD PMID:12842012 MGI:2667273 NCBI chr 7:116,987,616...117,125,035
Ensembl chr 7:116,987,605...117,125,164 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:3511552 (MGI:3056111|PMID:15353999)
(PMID:15300250)
PMID:21873635		 RGD PMID:15300250 PMID:15353999 PMID:21873635 MGI:3056111, RGD:13792537 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Chrna10 cholinergic receptor nicotinic alpha 10 subunit acts_upstream_of_or_within ISO MGI:3774038 (MGI:3771935|PMID:18077337) RGD PMID:18077337 MGI:3771935 NCBI chr 1:156,487,279...156,494,277
Ensembl chr 1:156,487,279...156,491,476 		JBrowse link
G Chrna9 cholinergic receptor nicotinic alpha 9 subunit acts_upstream_of_or_within ISO MGI:2158742 (MGI:3771935|PMID:18077337) RGD PMID:18077337 MGI:3771935 NCBI chr14:42,235,218...42,241,939
Ensembl chr14:42,235,226...42,242,192 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO MGI:1856399 (MGI:49531|PMID:1952599) RGD PMID:1952599 MGI:49531 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within ISO MGI:1857275 (MGI:892501|PMID:9165353) RGD PMID:9165353 MGI:892501 NCBI chr 7:129,098,489...129,127,620
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:101927|MGI:2180474 (MGI:2384365|PMID:12142028), (MGI:3689133|PMID:16900517)
GO_REF:0000107		 RGD
Ensembl		 PMID:12142028 PMID:16900517 GO_REF:0000107 MGI:2384365 MGI:3689133 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407 		JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within ISO MGI:101926 (MGI:3689133|PMID:16900517) RGD PMID:16900517 MGI:3689133 NCBI chr 4:34,984,264...34,989,926
Ensembl chr 4:34,984,232...34,991,343 		JBrowse link
G Efna2 ephrin A2 TAS RGD PMID:10792438 RGD:1300471 NCBI chr 7:9,515,635...9,528,071
Ensembl chr 7:9,516,429...9,527,061 		JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:1859095|PMID:10839360) RGD PMID:10839360 MGI:1859095 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:1857803|MGI:2150426|MGI:97486 (MGI:1344210|PMID:10471511), (MGI:3577160|PMID:15817220), (MGI:3702803|PMID:16916509) RGD PMID:10471511 PMID:15817220 PMID:16916509 MGI:1344210 MGI:3577160 MGI:3702803 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1347464|MGI:1859647 (MGI:3654570|PMID:16691564), (MGI:3688470|PMID:11062007) RGD PMID:11062007 PMID:16691564 MGI:3654570 MGI:3688470 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1345138 (MGI:3577817|PMID:15809037) RGD PMID:15809037 MGI:3577817 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961 (MGI:3056034|PMID:15328018) RGD PMID:15328018 MGI:3056034 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:2153351 (MGI:2386422|PMID:12194867) RGD PMID:12194867 MGI:2386422 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153811 (MGI:2153190|PMID:10934262) RGD PMID:10934262 MGI:2153190 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO MGI:1099809|MGI:2388671 (MGI:3654570|PMID:16691564) RGD PMID:16691564 MGI:3654570 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607 		JBrowse link
G Foxi1 forkhead box I1 acts_upstream_of_or_within ISO MGI:2448634 (MGI:2652196|PMID:12642503) RGD PMID:12642503 MGI:2652196 NCBI chr10:18,806,292...18,810,231
Ensembl chr10:18,806,308...18,810,231 		JBrowse link
G Frzb frizzled-related protein acts_upstream_of_or_within ISO MGI:98958 (MGI:3823145|PMID:18991062) RGD PMID:18991062 MGI:3823145 NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208 		JBrowse link
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO MGI:108474 (MGI:3616416|PMID:16495441) RGD PMID:16495441 MGI:3616416 NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369 		JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO MGI:108476 (MGI:3616416|PMID:16495441) RGD PMID:16495441 MGI:3616416 NCBI chr 7:70,055,012...70,086,781
Ensembl chr 7:70,055,068...70,086,776 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:4818492 (MGI:4821520|PMID:20652952) RGD PMID:20652952 MGI:4821520 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:2153826|MGI:2181200 (MGI:1928163|PMID:11135239), (MGI:5013488|PMID:21553382) RGD PMID:11135239 PMID:21553382 MGI:1928163 MGI:5013488 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (MGI:3578572|PMID:15829521), (MGI:3588904|PMID:15996652) RGD PMID:15829521 PMID:15996652 MGI:3578572 MGI:3588904 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor acts_upstream_of_or_within ISO MGI:2449921 (MGI:2429425|PMID:12441305) RGD PMID:12441305 MGI:2429425 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814 		JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO MGI:107160|MGI:2154542 (MGI:2154463|PMID:11748138), (MGI:3055237|PMID:15363417) RGD PMID:11748138 PMID:15363417 MGI:2154463 MGI:3055237 NCBI chr 1:186,319,110...186,326,771
Ensembl chr 1:186,319,110...186,326,771 		JBrowse link
G Hmx3 H6 family homeobox 3 acts_upstream_of_or_within ISO MGI:107159|MGI:1857577 (MGI:1197796|PMID:9435283), (MGI:3055237|PMID:15363417) RGD PMID:9435283 PMID:15363417 MGI:1197796 MGI:3055237 NCBI chr 1:186,313,237...186,315,201
Ensembl chr 1:186,313,063...186,315,201 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:3056069 (MGI:3055618|PMID:15367676) RGD PMID:15367676 MGI:3055618 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO MGI:1920249 (MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:3689278 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952 		JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within ISO MGI:1916289 (MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:3689278 NCBI chr13:32,472,390...32,500,139
Ensembl chr13:32,473,742...32,494,923 		JBrowse link
G Itga8 integrin subunit alpha 8 acts_upstream_of_or_within ISO MGI:2181699 (MGI:1355040|PMID:10742111) RGD PMID:10742111 MGI:1355040 NCBI chr17:75,304,004...75,501,510
Ensembl chr17:75,304,008...75,501,510 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:2680653 (MGI:1931646|PMID:11226272)		 Ensembl
RGD		 PMID:11226272 GO_REF:0000107 MGI:1931646 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
G Kcnq4 potassium voltage-gated channel subfamily Q member 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3618993 (MGI:3617033|PMID:16437162)
GO_REF:0000107		 RGD
Ensembl		 PMID:16437162 GO_REF:0000107 MGI:3617033 NCBI chr 5:134,275,145...134,326,992
Ensembl chr 5:134,275,934...134,326,932 		JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO MGI:1856419 (MGI:3611672|PMID:16325169) RGD PMID:16325169 MGI:3611672 NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031 		JBrowse link
G Myo15a myosin XVA acts_upstream_of_or_within ISO MGI:1857036 (MGI:3041655|PMID:14724386), (MGI:3054106|PMID:11718241) RGD PMID:11718241 PMID:14724386 MGI:3041655 MGI:3054106 NCBI chr10:45,277,619...45,335,953
Ensembl chr10:45,278,737...45,335,340 		JBrowse link
G Myo6 myosin VI involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:1856555 (MGI:77423|PMID:7493015)		 RGD PMID:7493015 PMID:21873635 MGI:77423, RGD:13792537 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292 		JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1856716|MGI:1860092|MGI:2155422|MGI:3511858 (MGI:2156358|PMID:11753415), (MGI:3510503|PMID:15389316), (MGI:53596|PMID:5795329) RGD PMID:5795329 PMID:11753415 PMID:15389316 MGI:2156358 MGI:3510503 MGI:53596 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Neurog1 neurogenin 1 acts_upstream_of_or_within
involved_in		 ISO MGI:2183171 (MGI:3607238|PMID:16145671)
UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067)		 RGD PMID:16145671 PMID:23419067 MGI:3607238 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (MGI:2157256|PMID:11784868) RGD PMID:11784868 MGI:2157256 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733 		JBrowse link
G Ntn1 netrin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2137018 (MGI:3718276|PMID:17616930)		 Ensembl
RGD		 PMID:17616930 GO_REF:0000107 MGI:3718276 NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326 		JBrowse link
G Otop1 otopetrin 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:1856638|MGI:2655558 (MGI:2654297|PMID:12651873)
PMID:21873635		 RGD PMID:12651873 PMID:21873635 MGI:2654297, RGD:13792537 NCBI chr14:72,505,036...72,532,497
Ensembl chr14:72,503,592...72,532,497 		JBrowse link
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within ISO MGI:2136272|MGI:97451 (MGI:1335816|PMID:10225993) RGD PMID:10225993 MGI:1335816 NCBI chr14:96,082,151...96,089,161
Ensembl chr14:96,082,151...96,089,086 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:97450 (MGI:1335816|PMID:10225993) RGD PMID:10225993 MGI:1335816 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
UniProtKB:Q00288 (MGI:4822275|PMID:20727173), (MGI:84247|PMID:8951055)
MGI:109344|MGI:1857673 (MGI:3052393|PMID:15242798), (MGI:3702803|PMID:16916509)		 UniProt
RGD		 PMID:8951055 PMID:15242798 PMID:16916509 PMID:20727173 GO_REF:0000024 MGI:3052393 MGI:3702803 MGI:4822275 MGI:84247 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISO UniProtKB:P32114 (MGI:4822275|PMID:20727173) RGD PMID:20727173 MGI:4822275 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Pou4f3 POU class 4 homeobox 3 acts_upstream_of_or_within ISO MGI:1857425 (MGI:2451279|PMID:12585968) RGD PMID:12585968 MGI:2451279 NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO MGI:98218 (MGI:1306737|PMID:9729491) RGD PMID:9729491 MGI:1306737 NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within ISO MGI:97712 (MGI:1306737|PMID:9729491) RGD PMID:9729491 MGI:1306737 NCBI chr 3:14,132,511...14,168,535
Ensembl chr 3:14,094,004...14,168,535 		JBrowse link
G Ptprq protein tyrosine phosphatase, receptor type, Q acts_upstream_of_or_within ISO MGI:2679316 (MGI:2677560|PMID:14534255) RGD PMID:14534255 MGI:2677560 NCBI chr 7:42,837,109...43,016,917
Ensembl chr 7:42,837,109...43,016,917 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within ISO MGI:2183225 (MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:3814781 NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152 		JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:106034 (MGI:3578604|PMID:15788460) RGD PMID:15788460 MGI:3578604 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within ISO MGI:102780 (MGI:3578604|PMID:15788460) RGD PMID:15788460 MGI:3578604 NCBI chr 6:91,802,328...91,816,062
Ensembl chr 6:91,802,329...91,815,992 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO MGI:4417931 (MGI:4413621|PMID:19936227) RGD PMID:19936227 MGI:4413621 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393 		JBrowse link
G Sobp sine oculis binding protein homolog acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:1856614 (MGI:3664354|PMID:16962269)
PMID:21873635		 RGD PMID:16962269 PMID:21873635 MGI:3664354, RGD:13792537 NCBI chr20:46,482,265...46,661,452
Ensembl chr20:46,482,765...46,663,541 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:2447995 (MGI:3578496|PMID:15846349) RGD PMID:15846349 MGI:3578496 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within ISO MGI:3578633|MGI:99604 (MGI:3577817|PMID:15809037) RGD PMID:15809037 MGI:3577817 NCBI chr15:82,692,312...82,697,408
Ensembl chr15:82,692,143...82,698,009 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2179136|MGI:2179190|MGI:2179191|MGI:3046196|MGI:3619149 (MGI:2671642|PMID:12913075), (MGI:3039048|PMID:15084464), (MGI:3530686|PMID:15652707), (MGI:3629255|PMID:16600992)		 UniProt
RGD		 PMID:12913075 PMID:15084464 PMID:15652707 PMID:16600992 GO_REF:0000024 MGI:2671642 MGI:3039048 MGI:3530686 MGI:3629255 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO UniProtKB:Q60707 (MGI:6710296|PMID:33795231) RGD PMID:33795231 MGI:6710296 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISS
ISO		 GO_REF:0000024
(PMID:21204207)		 UniProt
RGD		 PMID:21204207 GO_REF:0000024 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592 		JBrowse link
G Tmie transmembrane inner ear acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:1857053 (MGI:2183496|PMID:12140191)
PMID:21873635		 RGD PMID:12140191 PMID:21873635 MGI:2183496, RGD:13792537 NCBI chr 8:110,849,713...110,864,803
Ensembl chr 8:110,850,034...110,864,803 		JBrowse link
G Ush1c USH1 protein network component harmonin involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2651858|MGI:2651859 (MGI:2675093|PMID:14519688)		 RGD PMID:14519688 PMID:21873635 MGI:2675093, RGD:13792537 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671 		JBrowse link
G Ush1g USH1 protein network component sans acts_upstream_of_or_within ISO MGI:2450561 (MGI:2450572|PMID:12588793), (MGI:49706|PMID:1927362) RGD PMID:1927362 PMID:12588793 MGI:2450572 MGI:49706 NCBI chr10:100,559,721...100,563,590
Ensembl chr10:100,557,629...100,563,590 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:98956 (MGI:3582112|PMID:15961523) RGD PMID:15961523 MGI:3582112 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:98953 (MGI:3582112|PMID:15961523) RGD PMID:15961523 MGI:3582112 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (MGI:3823145|PMID:18991062) RGD PMID:18991062 MGI:3823145 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
iris morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxe3 forkhead box E3 involved_in ISS
ISO		 PMID:17064680
(MGI:3703484|PMID:17064680)		 RGD PMID:17064680 PMID:17064680 MGI:3703484, RGD:10047226 NCBI chr 5:128,445,594...128,446,454
Ensembl chr 5:128,445,594...128,446,454 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:103223 (MGI:5429122|PMID:22627278)
GO_REF:0000107		 RGD
Ensembl		 PMID:22627278 GO_REF:0000107 MGI:5429122 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4818711|PMID:20579985)		 Ensembl
RGD		 PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223 		JBrowse link
G Pax6 paired box 6 involved_in ISO
IEA		 (PMID:7550230)
GO_REF:0000107		 RGD
Ensembl		 PMID:7550230 GO_REF:0000107 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Pitx2 paired-like homeodomain 2 involved_in ISO (PMID:9437321) RGD PMID:9437321 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO MGI:106918|MGI:2136645 (MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:5429122 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377 		JBrowse link
lens fiber cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl-interactor 2 involved_in ISO (MGI:3525751|PMID:15572692) RGD PMID:15572692 MGI:3525751 NCBI chr 9:61,856,379...61,904,029
Ensembl chr 9:61,827,139...61,905,699 		JBrowse link
G Atf4 activating transcription factor 4 involved_in ISO
ISS		 (MGI:1339872|PMID:10096021), (MGI:1859108|PMID:10885750), (MGI:2158533|PMID:11806972)
GO_REF:0000024		 RGD
UniProt		 PMID:10096021 PMID:10885750 PMID:11806972 GO_REF:0000024 MGI:1339872 MGI:1859108 MGI:2158533 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446 		JBrowse link
G Cryaa crystallin, alpha A acts_upstream_of_or_within ISO MGI:3665275|MGI:3777403 (MGI:3655912|PMID:16799046), (MGI:3775669|PMID:18056999) RGD PMID:16799046 PMID:18056999 MGI:3655912 MGI:3775669 NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349 		JBrowse link
G Crygb crystallin, gamma B acts_upstream_of_or_within ISO MGI:1857597 (MGI:3691890|PMID:12426373), (MGI:81294|PMID:8626090) RGD PMID:8626090 PMID:12426373 MGI:3691890 MGI:81294 NCBI chr 9:66,461,460...66,463,520
Ensembl chr 9:66,461,460...66,463,520 		JBrowse link
G Epha2 Eph receptor A2 involved_in ISO (MGI:3831440|PMID:18948590) RGD PMID:18948590 MGI:3831440 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:1332720|PMID:10080188)
(PMID:11850194)		 RGD PMID:10080188 PMID:11850194 MGI:1332720 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 acts_upstream_of_or_within ISO MGI:1856684 (MGI:5551670|PMID:24239381) RGD PMID:24239381 MGI:5551670 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121 		JBrowse link
lens induction in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1857137 (MGI:1316914|PMID:9851982)
GO_REF:0000107		 RGD
Ensembl		 PMID:9851982 GO_REF:0000107 MGI:1316914 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in ISO
IEA		 (MGI:4818711|PMID:20579985)
GO_REF:0000107		 RGD
Ensembl		 PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223 		JBrowse link
G Pou2f1 POU class 2 homeobox 1 acts_upstream_of_or_within ISO MGI:98364 (MGI:3701404|PMID:17140559) RGD PMID:17140559 MGI:3701404 NCBI chr13:78,120,617...78,263,306
Ensembl chr13:78,130,685...78,263,363 		JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO MGI:3693322 (MGI:3692850|PMID:17066077) RGD PMID:17066077 MGI:3692850 NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:101898 (MGI:3701404|PMID:17140559) RGD PMID:17140559 MGI:3701404 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:1888387 (MGI:1347707|PMID:10571739) RGD PMID:10571739 MGI:1347707 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
lens morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcar3 BCAR3 adaptor protein, NSP family member acts_upstream_of_or_within ISO MGI:4359826 (MGI:4358852|PMID:19365570) RGD PMID:19365570 MGI:4358852 NCBI chr 2:210,525,260...210,638,674
Ensembl chr 2:210,525,260...210,638,798 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:3045749|MGI:3696062 (MGI:3807101|PMID:18653562) RGD PMID:18653562 MGI:3807101 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Cryaa crystallin, alpha A acts_upstream_of_or_within ISO MGI:1858023|MGI:3665274|MGI:3665275 (MGI:3655912|PMID:16799046), (MGI:82388|PMID:8812430) RGD PMID:8812430 PMID:16799046 MGI:3655912 MGI:82388 NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2148567|MGI:3045749 (MGI:3603687|PMID:16102745)
GO_REF:0000107		 RGD
Ensembl		 PMID:16102745 GO_REF:0000107 MGI:3603687 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (MGI:1933072|PMID:11290300) RGD PMID:11290300 MGI:1933072 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341 		JBrowse link
G Lctl lactase-like involved_in ISO (MGI:6274960|PMID:29425878) RGD PMID:29425878 MGI:6274960 NCBI chr 8:64,618,356...64,654,851
Ensembl chr 8:64,618,350...64,639,357 		JBrowse link
G Meis1 Meis homeobox 1 acts_upstream_of_or_within ISO MGI:3029063 (MGI:3028436|PMID:14713950) RGD PMID:14713950 MGI:3028436 NCBI chr14:93,155,426...93,294,373
Ensembl chr14:93,155,419...93,294,265 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:3605480 (MGI:3604842|PMID:15728677) RGD PMID:15728677 MGI:3604842 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787 		JBrowse link
G Nectin3 nectin cell adhesion molecule 3 acts_upstream_of_or_within ISO MGI:3605481 (MGI:3604842|PMID:15728677) RGD PMID:15728677 MGI:3604842 NCBI chr11:54,362,712...54,461,316
Ensembl chr11:54,364,487...54,462,519 		JBrowse link
G Pitx3 paired-like homeodomain 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:4353482|PMID:19334279)		 UniProt
RGD		 PMID:19334279 GO_REF:0000024 MGI:4353482 NCBI chr 1:245,001,106...245,013,881
Ensembl chr 1:245,001,164...245,013,892 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:1332720|PMID:10080188) RGD PMID:10080188 MGI:1332720 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (MGI:3693412|PMID:17003410) RGD PMID:17003410 MGI:3693412 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Sox1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO MGI:2137412 (MGI:1201714|PMID:9512512) RGD PMID:9512512 MGI:1201714 NCBI chr16:77,134,795...77,139,628
Ensembl chr16:77,137,584...77,138,762 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3797299|PMID:18423449)		 UniProt
RGD		 PMID:18423449 GO_REF:0000024 MGI:3797299 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354 		JBrowse link
G Tdrd7 tudor domain containing 7 involved_in ISO
IBA
ISS		 (MGI:4943339|PMID:21436445)
PMID:21873635
(PMID:21436445)
GO_REF:0000024		 RGD
UniProt		 PMID:21436445 PMID:21873635 GO_REF:0000024 MGI:4943339, RGD:13792537 NCBI chr 5:60,238,742...60,312,548
Ensembl chr 5:60,238,678...60,312,544 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:2176682 (MGI:1329246|PMID:9918694), (MGI:3774683|PMID:18224708) RGD PMID:9918694 PMID:18224708 MGI:1329246 MGI:3774683 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
lens placode formation involved in camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within ISO MGI:3521833 (MGI:3513737|PMID:15569927) RGD PMID:15569927 MGI:3513737 NCBI chr 7:52,711,255...52,792,758
Ensembl chr 7:52,711,257...52,792,743 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:3836138|PMID:11850194) RGD PMID:11850194 MGI:3836138 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
middle ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 acts_upstream_of_or_within ISO MGI:1857637 (MGI:65725|PMID:8152482) RGD PMID:8152482 MGI:65725 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885 		JBrowse link
G Ednra endothelin receptor type A involved_in ISO MGI:2687362 (MGI:3847842|PMID:19185569) RGD PMID:19185569 MGI:3847842 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:3785162 (MGI:6100817|PMID:27959908) RGD PMID:27959908 MGI:6100817 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:2150426 (MGI:1344210|PMID:10471511) RGD PMID:10471511 MGI:1344210 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 acts_upstream_of_or_within ISO MGI:3775095 (MGI:3774741|PMID:18219393) RGD PMID:18219393 MGI:3774741 NCBI chr 1:22,172,275...22,415,978
Ensembl chr 1:22,172,275...22,415,976 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:3574787 (MGI:3527944|PMID:15630379) RGD PMID:15630379 MGI:3527944 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:2388397 (MGI:3713422|PMID:17525797) RGD PMID:17525797 MGI:3713422 NCBI chr17:4,482,014...4,485,155 JBrowse link
G Gsc goosecoid homeobox involved_in ISO (MGI:3035838|PMID:14973294) RGD PMID:14973294 MGI:3035838 NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:102778|MGI:1857530|MGI:2385711 (MGI:3525808|PMID:15634706), (MGI:3587518|PMID:15861402), (MGI:3608156|PMID:16221728)
GO_REF:0000107		 RGD
Ensembl		 PMID:15634706 PMID:15861402 PMID:16221728 GO_REF:0000107 MGI:3525808 MGI:3587518 MGI:3608156 Ensembl chr 4:81,262,768...81,265,044 JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO MGI:1920249 (MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:3689278 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952 		JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within ISO MGI:1916289 (MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:3689278 NCBI chr13:32,472,390...32,500,139
Ensembl chr13:32,473,742...32,494,923 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:1933766 (MGI:3611627|PMID:16330189) RGD PMID:16330189 MGI:3611627 NCBI chr14:72,961,170...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO MGI:2178233|MGI:2386570 (MGI:3712581|PMID:17523175) RGD PMID:17523175 MGI:3712581 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (MGI:3769195|PMID:17712420) RGD PMID:17712420 MGI:3769195 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within ISO MGI:1931319 (MGI:3035838|PMID:14973294) RGD PMID:14973294 MGI:3035838 NCBI chr14:69,183,795...69,186,182
Ensembl chr14:69,183,820...69,186,061 		JBrowse link
G Nog noggin involved_in IEA
ISO		 GO_REF:0000107
(PMID:10080184)		 Ensembl
RGD		 PMID:10080184 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO
ISS		 UniProtKB:Q91ZD1 (MGI:3848564|PMID:19389375)
GO_REF:0000024		 RGD
UniProt		 PMID:19389375 GO_REF:0000024 MGI:3848564 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO
ISS		 (MGI:3848564|PMID:19389375)
GO_REF:0000024		 RGD
UniProt		 PMID:19389375 GO_REF:0000024 MGI:3848564 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3626341 (MGI:3623660|PMID:16571658)		 Ensembl
RGD		 PMID:16571658 GO_REF:0000107 MGI:3623660 NCBI chr 3:61,575,447...61,594,393
Ensembl chr 3:61,575,447...61,594,347 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO MGI:1857640|MGI:98218 (MGI:1306737|PMID:9729491), (MGI:73363|PMID:7758948) RGD PMID:7758948 PMID:9729491 MGI:1306737 MGI:73363 NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within ISO MGI:97712 (MGI:1306737|PMID:9729491) RGD PMID:9729491 MGI:1306737 NCBI chr 3:14,132,511...14,168,535
Ensembl chr 3:14,094,004...14,168,535 		JBrowse link
G Rpl38 ribosomal protein L38 acts_upstream_of_or_within ISO MGI:1861228 (MGI:4888466|PMID:21062742) RGD PMID:21062742 MGI:4888466 NCBI chr10:99,701,330...99,705,004
Ensembl chr10:99,701,362...99,705,004 		JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:2655195 (MGI:2671031|PMID:12874121) RGD PMID:12874121 MGI:2671031 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Six2 SIX homeobox 2 acts_upstream_of_or_within ISO MGI:96174 (MGI:3525808|PMID:15634706) RGD PMID:15634706 MGI:3525808 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1932522|MGI:2179190|MGI:2179191|MGI:3619149 (MGI:3530686|PMID:15652707), (MGI:3629255|PMID:16600992), (MGI:4822099|PMID:20501333)		 UniProt
RGD		 PMID:15652707 PMID:16600992 PMID:20501333 GO_REF:0000024 MGI:3530686 MGI:3629255 MGI:4822099 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tshz1 teashirt zinc finger homeobox 1 acts_upstream_of_or_within ISO MGI:3721421 (MGI:3720547|PMID:17586487) RGD PMID:17586487 MGI:3720547 NCBI chr18:77,376,399...77,452,315
Ensembl chr18:77,377,394...77,453,509 		JBrowse link
negative regulation of retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857430 (MGI:1336407|PMID:10321489) RGD PMID:10321489 MGI:1336407 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Bhlhe23 basic helix-loop-helix family, member e23 acts_upstream_of_or_within ISO MGI:3054837 (MGI:3054140|PMID:15363390) RGD PMID:15363390 MGI:3054140 NCBI chr 3:167,889,009...167,891,223
Ensembl chr 3:167,889,009...167,891,223 		JBrowse link
G Tmem215 transmembrane protein 215 acts_upstream_of_or_within ISO (MGI:6507628|PMID:30370660) RGD PMID:30370660 MGI:6507628 NCBI chr 5:55,612,568...55,615,828
Ensembl chr 5:55,612,568...55,615,828 		JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casz1 castor zinc finger 1 acts_upstream_of_or_within ISO MGI:3052661|MGI:4841554 (MGI:5629913|PMID:25654255) RGD PMID:25654255 MGI:5629913 NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400 		JBrowse link
nose morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (MGI:2176418|PMID:11731796) RGD PMID:11731796 MGI:2176418 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) RGD PMID:17273977 NCBI chr 8:58,549,743...58,568,861
Ensembl chr 8:58,549,736...58,568,860 		JBrowse link
optic cup formation involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO MGI:5469314 (MGI:5466629|PMID:23129809) RGD PMID:23129809 MGI:5466629 NCBI chr 5:145,908,181...145,981,609
Ensembl chr 5:145,908,181...145,985,564 		JBrowse link
optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 acts_upstream_of_or_within ISO MGI:1861722 (MGI:3624188|PMID:16611695) RGD PMID:16611695 MGI:3624188 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1353450 (MGI:3624188|PMID:16611695)		 Ensembl
RGD		 PMID:16611695 GO_REF:0000107 MGI:3624188 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Pax2 paired box 2 involved_in ISO
ISS		 (MGI:84247|PMID:8951055)
GO_REF:0000024		 RGD
UniProt		 PMID:8951055 GO_REF:0000024 MGI:84247 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
optic cup structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tfap2a transcription factor AP-2 alpha involved_in ISO
ISS		 (MGI:4439459|PMID:20150232)
GO_REF:0000024		 RGD
UniProt		 PMID:20150232 GO_REF:0000024 MGI:4439459 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
optic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six3 SIX homeobox 3 involved_in ISO (MGI:2136715|PMID:11458394) RGD PMID:11458394 MGI:2136715 NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISS
ISO		 GO_REF:0000024
(MGI:4439459|PMID:20150232)		 UniProt
RGD		 PMID:20150232 GO_REF:0000024 MGI:4439459 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
otic vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:95517 (MGI:2683889|PMID:14623822) RGD PMID:14623822 MGI:2683889 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgf3 fibroblast growth factor 3 acts_upstream_of_or_within ISO MGI:1099809|MGI:99604 (MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:3720541 NCBI chr 1:200,001,261...200,005,187
Ensembl chr 1:200,001,261...200,005,187 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:95517 (MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:3720541 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153790 (MGI:1197797|PMID:9435295) RGD PMID:9435295 MGI:1197797 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO MGI:1931124 (MGI:1206234|PMID:9620767) RGD PMID:9620767 MGI:1206234 NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within
involved_in		 ISO
ISS		 MGI:1932522|MGI:2385468 (MGI:3795349|PMID:18377888)
GO_REF:0000024		 RGD
UniProt		 PMID:18377888 GO_REF:0000024 MGI:3795349 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tcap titin-cap involved_in ISO (MGI:1314551|PMID:9817758) RGD PMID:9817758 MGI:1314551 NCBI chr10:83,381,719...83,382,887
Ensembl chr10:83,381,719...83,382,887 		JBrowse link
otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:2150426 (MGI:3702803|PMID:16916509) RGD PMID:16916509 MGI:3702803 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO MGI:3046793 (MGI:3703494|PMID:17074316) RGD PMID:17074316 MGI:3703494 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
otolith formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc44a4 solute carrier family 44, member 4 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr20:3,903,099...3,919,215
Ensembl chr20:3,903,099...3,919,215 		JBrowse link
otolith morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 acts_upstream_of_or_within ISO MGI:1856106 (MGI:53623|PMID:5367369) RGD PMID:5367369 MGI:53623 NCBI chr17:26,171,965...26,197,276
Ensembl chr17:26,172,018...26,197,251 		JBrowse link
G Lrig1 leucine-rich repeats and immunoglobulin-like domains 1 acts_upstream_of_or_within ISO MGI:2443955 (MGI:5519140|PMID:24086156) RGD PMID:24086156 MGI:5519140 NCBI chr 4:127,130,899...127,230,956
Ensembl chr 4:127,130,898...127,231,513 		JBrowse link
G Lrig3 leucine-rich repeats and immunoglobulin-like domains 3 acts_upstream_of_or_within ISO MGI:107935 (MGI:5519140|PMID:24086156) RGD PMID:24086156 MGI:5519140 NCBI chr 7:61,816,313...61,866,275
Ensembl chr 7:61,816,342...61,866,481 		JBrowse link
G Ttc39c tetratricopeptide repeat domain 39C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:3,768,802...3,887,932
Ensembl chr18:3,805,183...3,887,930 		JBrowse link
outer ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:2150426 (MGI:1344210|PMID:10471511) RGD PMID:10471511 MGI:1344210 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:3574787 (MGI:3527944|PMID:15630379) RGD PMID:15630379 MGI:3527944 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:2388397 (MGI:3713422|PMID:17525797) RGD PMID:17525797 MGI:3713422 NCBI chr17:4,482,014...4,485,155 JBrowse link
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within ISO MGI:1346859 (MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:3832113 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO MGI:1346858 (MGI:3832113|PMID:18952847) RGD PMID:18952847 MGI:3832113 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3626341 (MGI:3623660|PMID:16571658)
GO_REF:0000107		 RGD
Ensembl		 PMID:16571658 GO_REF:0000107 MGI:3623660 NCBI chr 3:61,575,447...61,594,393
Ensembl chr 3:61,575,447...61,594,347 		JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within
involved_in		 ISO
ISS		 MGI:1932522|MGI:3619149 (MGI:3629255|PMID:16600992)
GO_REF:0000024		 RGD
UniProt		 PMID:16600992 GO_REF:0000024 MGI:3629255 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:3698161 (MGI:3697539|PMID:17127413) RGD PMID:17127413 MGI:3697539 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
positive regulation of otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stox1 storkhead box 1 involved_in ISO (MGI:5635320|PMID:25677106) RGD PMID:25677106 MGI:5635320 NCBI chr20:30,598,656...30,666,371
Ensembl chr20:30,598,168...30,666,939 		JBrowse link
positive regulation of retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp6 caspase 6 IMP RGD PMID:12917395 RGD:2301324 NCBI chr 2:218,466,063...218,478,503
Ensembl chr 2:218,466,076...218,478,502 		JBrowse link
post-embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within ISO MGI:99702 (MGI:3692135|PMID:15955981) RGD PMID:15955981 MGI:3692135 NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1097161 (MGI:3692135|PMID:15955981) RGD PMID:15955981 MGI:3692135 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO MGI:96683 (MGI:5318610|PMID:22426483) RGD PMID:22426483 MGI:5318610 NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO MGI:3590648 (MGI:3614611|PMID:16466397) RGD PMID:16466397 MGI:3614611 NCBI chr11:35,422,328...35,428,247
Ensembl chr11:35,422,328...35,428,254 		JBrowse link
G Kdr kinase insert domain receptor acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:95558 (MGI:5318610|PMID:22426483)
GO_REF:0000107		 RGD
Ensembl		 PMID:22426483 GO_REF:0000107 MGI:5318610 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018 		JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within ISO (MGI:5516374|PMID:24101522) RGD PMID:24101522 MGI:5516374 NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071 		JBrowse link
post-embryonic eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe23 basic helix-loop-helix family, member e23 acts_upstream_of_or_within ISO MGI:3054837 (MGI:3054140|PMID:15363390) RGD PMID:15363390 MGI:3054140 NCBI chr 3:167,889,009...167,891,223
Ensembl chr 3:167,889,009...167,891,223 		JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 involved_in ISO (PMID:25406291) RGD PMID:25406291 NCBI chr14:102,610,813...102,690,027
Ensembl chr14:102,610,908...102,690,018 		JBrowse link
G Fbn1 fibrillin 1 involved_in ISO (PMID:25406291) RGD PMID:25406291 NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889 		JBrowse link
G Mfap2 microfibril associated protein 2 involved_in ISO (PMID:25406291) RGD PMID:25406291 NCBI chr 5:153,312,068...153,320,266
Ensembl chr 5:153,314,711...153,320,259 		JBrowse link
post-embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc66 coiled-coil domain containing 66 acts_upstream_of_or_within ISO MGI:3893603 (MGI:5141557|PMID:21680557) RGD PMID:21680557 MGI:5141557 NCBI chr16:2,662,125...2,694,031
Ensembl chr16:2,662,131...2,694,023 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:2675211|PMID:12915475)
(MGI:3051713|PMID:15316081), (MGI:3690408|PMID:16885194)		 RGD PMID:12915475 PMID:15316081 PMID:16885194 MGI:2675211 MGI:3051713 MGI:3690408 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261 		JBrowse link
G Dscam DS cell adhesion molecule acts_upstream_of_or_within ISO MGI:3761008 (MGI:3768917|PMID:18216855) RGD PMID:18216855 MGI:3768917 NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 acts_upstream_of_or_within ISO MGI:2668595 (MGI:1334014|PMID:10097103) RGD PMID:10097103 MGI:1334014 NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792 		JBrowse link
regulation of retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within ISO (MGI:2155023|PMID:11747369) RGD PMID:11747369 MGI:2155023 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615 		JBrowse link
G Cntf ciliary neurotrophic factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2155023|PMID:11747369)
GO_REF:0000107		 RGD
Ensembl		 PMID:11747369 GO_REF:0000107 MGI:2155023 NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (MGI:2155023|PMID:11747369) RGD PMID:11747369 MGI:2155023 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
retina layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:F8W3V6 (MGI:5306539|PMID:21959375)		 UniProt
RGD		 PMID:21959375 GO_REF:0000024 MGI:5306539 NCBI chr 1:15,768,047...15,886,744
Ensembl chr 1:15,762,462...15,891,041 		JBrowse link
G Arl6 ADP-ribosylation factor like GTPase 6 acts_upstream_of_or_within ISO MGI:4442928|MGI:5310744 (MGI:4442100|PMID:20333246), (MGI:5306530|PMID:22139371) RGD PMID:20333246 PMID:22139371 MGI:4442100 MGI:5306530 NCBI chr11:40,711,878...40,738,254
Ensembl chr11:40,712,022...40,737,937 		JBrowse link
G Atp8a2 ATPase phospholipid transporting 8A2 involved_in ISO (MGI:5574432|PMID:24413176) RGD PMID:24413176 MGI:5574432 NCBI chr15:33,817,309...34,350,193
Ensembl chr15:33,819,755...34,350,223 		JBrowse link
G Calb1 calbindin 1 involved_in ISO (MGI:1353814|PMID:10741426) RGD PMID:10741426 MGI:1353814 NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (MGI:3696487|PMID:17234588) RGD PMID:17234588 MGI:3696487 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261 		JBrowse link
G Dscam DS cell adhesion molecule involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415 		JBrowse link
G Fat3 FAT atypical cadherin 3 acts_upstream_of_or_within ISO MGI:1341907 (MGI:5292419|PMID:21903076) RGD PMID:21903076 MGI:5292419 NCBI chr 8:12,691,470...13,274,336
Ensembl chr 8:12,694,019...13,273,135 		JBrowse link
G Fjx1 four-jointed box kinase 1 acts_upstream_of_or_within ISO MGI:2444314 (MGI:5292419|PMID:21903076) RGD PMID:21903076 MGI:5292419 NCBI chr 3:88,774,220...88,776,321
Ensembl chr 3:88,774,220...88,776,321 		JBrowse link
G Foxn4 forkhead box N4 involved_in ISO (MGI:3054139|PMID:15363391) RGD PMID:15363391 MGI:3054139 NCBI chr12:42,336,706...42,359,932
Ensembl chr12:42,340,323...42,359,921 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in ISO
IEA		 (MGI:4818711|PMID:20579985)
GO_REF:0000107		 RGD
Ensembl		 PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223 		JBrowse link
G Irx6 iroquois homeobox 6 acts_upstream_of_or_within ISO MGI:5448232 (MGI:5447580|PMID:23172916) RGD PMID:23172916 MGI:5447580 NCBI chr19:14,330,440...14,336,403
Ensembl chr19:14,330,440...14,336,403 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:1856965|MGI:3510641 (MGI:3588182|PMID:16111892) RGD PMID:16111892 MGI:3588182 NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:1353814|PMID:10741426), (MGI:3772525|PMID:18094249)		 UniProt
RGD		 PMID:10741426 PMID:18094249 GO_REF:0000024 MGI:1353814 MGI:3772525 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Megf11 multiple EGF-like-domains 11 involved_in ISO (MGI:5316136|PMID:22407321) RGD PMID:22407321 MGI:5316136 NCBI chr 8:64,892,312...65,218,984
Ensembl chr 8:64,892,387...65,216,061 		JBrowse link
G Mir145 microRNA 145 IMP RGD PMID:34291866 RGD:155260301 NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727 		JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO MGI:2676199 (MGI:6163329|PMID:29654250) RGD PMID:29654250 MGI:6163329 NCBI chr  X:5,796,487...5,820,934
Ensembl chr  X:5,796,487...5,820,934 		JBrowse link
G Prom1 prominin 1 involved_in ISO (MGI:3838023|PMID:19228982) RGD PMID:19228982 MGI:3838023 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
G Ptf1a pancreas associated transcription factor 1a involved_in ISO
ISS		 (MGI:3691257|PMID:17075007)
GO_REF:0000024		 RGD
UniProt		 PMID:17075007 GO_REF:0000024 MGI:3691257 NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135 		JBrowse link
G Ptprm protein tyrosine phosphatase, receptor type, M involved_in ISS
ISO		 GO_REF:0000024
(PMID:14623235)		 UniProt
RGD		 PMID:14623235 GO_REF:0000024 NCBI chr 9:106,639,573...107,343,698
Ensembl chr 9:106,639,573...107,343,698 		JBrowse link
G Rdh13 retinol dehydrogenase 13 acts_upstream_of_or_within ISO MGI:5467544 (MGI:5462166|PMID:22605914) RGD PMID:22605914 MGI:5462166 NCBI chr 1:69,373,014...69,401,454
Ensembl chr 1:69,373,113...69,400,908 		JBrowse link
G Rs1 retinoschisin 1 acts_upstream_of_or_within ISO MGI:2179757|MGI:3056058 (MGI:2179152|PMID:11983912), (MGI:3055638|PMID:15326152) RGD PMID:11983912 PMID:15326152 MGI:2179152 MGI:3055638 NCBI chr  X:33,963,657...33,992,115
Ensembl chr  X:33,963,657...33,992,115 		JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 involved_in ISO (MGI:5693671|PMID:26287463) RGD PMID:26287463 MGI:5693671 NCBI chr10:98,824,923...99,102,590
Ensembl chr10:98,828,348...99,101,759 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 acts_upstream_of_or_within
involved_in		 ISO MGI:2655190 (MGI:4414613|PMID:19766171)
MGI:2655190 (MGI:6155272|PMID:29677370)		 RGD PMID:19766171 PMID:29677370 MGI:4414613 MGI:6155272 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISO (PMID:20607706) RGD PMID:20607706 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in ISO (PMID:20607706) RGD PMID:20607706 NCBI chr 9:21,786,250...21,815,785
Ensembl chr 9:21,786,258...21,814,520 		JBrowse link
G Tspan12 tetraspanin 12 involved_in ISO
ISS		 (MGI:4410396|PMID:19837033)
GO_REF:0000024		 RGD
UniProt		 PMID:19837033 GO_REF:0000024 MGI:4410396 NCBI chr 4:50,313,768...50,389,246
Ensembl chr 4:50,313,772...50,389,246 		JBrowse link
retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:3707409 (MGI:3703109|PMID:17092954) RGD PMID:17092954 MGI:3703109 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:2675211|PMID:12915475)
(MGI:3696487|PMID:17234588), (MGI:5608935|PMID:25147295)		 RGD PMID:12915475 PMID:17234588 PMID:25147295 MGI:2675211 MGI:3696487 MGI:5608935 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3848562|PMID:19389377)		 UniProt
Ensembl
RGD		 PMID:19389377 GO_REF:0000024 GO_REF:0000107 MGI:3848562 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:6693686 (MGI:6423642|PMID:32265257)
GO_REF:0000107		 RGD
Ensembl		 PMID:32265257 GO_REF:0000107 MGI:6423642 NCBI chr11:44,318,836...44,418,382
Ensembl chr11:44,318,836...44,418,382 		JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in ISO (PMID:15346351) RGD PMID:15346351 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (MGI:3823171|PMID:18985738) RGD PMID:18985738 MGI:3823171 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 acts_upstream_of_or_within ISO MGI:2159011|MGI:2673381 (MGI:4453938|PMID:20144606) RGD PMID:20144606 MGI:4453938 NCBI chr 9:104,252,001...104,408,349
Ensembl chr 9:104,252,001...104,408,349 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within ISO (MGI:5789479|PMID:27008858) RGD PMID:27008858 MGI:5789479 NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690 		JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO MGI:2676199 (MGI:3575380|PMID:15716406) RGD PMID:15716406 MGI:3575380 NCBI chr  X:5,796,487...5,820,934
Ensembl chr  X:5,796,487...5,820,934 		JBrowse link
G Nectin3 nectin cell adhesion molecule 3 acts_upstream_of_or_within ISO MGI:3605481 (MGI:3604842|PMID:15728677) RGD PMID:15728677 MGI:3604842 NCBI chr11:54,362,712...54,461,316
Ensembl chr11:54,364,487...54,462,519 		JBrowse link
G Prom1 prominin 1 involved_in ISO (PMID:18654668) RGD PMID:18654668 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
G Ptf1a pancreas associated transcription factor 1a acts_upstream_of_or_within ISO MGI:3701996 (MGI:3701413|PMID:17301087) RGD PMID:17301087 MGI:3701413 NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 acts_upstream_of_or_within ISO (MGI:4437581|PMID:20300562) RGD PMID:20300562 MGI:4437581 NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175 		JBrowse link
G Rp1 RP1, axonemal microtubule associated acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator acts_upstream_of_or_within ISO MGI:2386674 (MGI:1354839|PMID:10725384) RGD PMID:10725384 MGI:1354839 NCBI chr  X:12,566,447...12,628,171
Ensembl chr  X:12,566,645...12,747,882 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:3625176 (MGI:3624065|PMID:16651659) RGD PMID:16651659 MGI:3624065 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Vsx2 visual system homeobox 2 acts_upstream_of_or_within ISO MGI:1856112 (MGI:3701027|PMID:16854970), (MGI:79586|PMID:8630490) RGD PMID:8630490 PMID:16854970 MGI:3701027 MGI:79586 NCBI chr 6:104,214,842...104,240,264
Ensembl chr 6:104,217,230...104,240,018 		JBrowse link
retinal bipolar neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:3707409 (MGI:3703109|PMID:17092954) RGD PMID:17092954 MGI:3703109 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510 		JBrowse link
G Cabp4 calcium binding protein 4 acts_upstream_of_or_within ISO MGI:3056615 (MGI:3609280|PMID:16249514) RGD PMID:16249514 MGI:3609280 NCBI chr 1:201,428,671...201,442,950
Ensembl chr 1:201,428,672...201,433,172 		JBrowse link
G Casz1 castor zinc finger 1 acts_upstream_of_or_within ISO (MGI:5630049|PMID:24467707) RGD PMID:24467707 MGI:5630049 NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (MGI:5629913|PMID:25654255) RGD PMID:25654255 MGI:5629913 NCBI chr14:86,255,065...86,340,839
Ensembl chr14:86,255,065...86,342,416 		JBrowse link
G Irx5 iroquois homeobox 5 acts_upstream_of_or_within ISO MGI:1890816 (MGI:3776945|PMID:18322081) RGD PMID:18322081 MGI:3776945 NCBI chr19:14,639,052...14,643,911
Ensembl chr19:14,624,225...14,642,318 		JBrowse link
G Irx6 iroquois homeobox 6 acts_upstream_of_or_within ISO MGI:5448232 (MGI:5447580|PMID:23172916) RGD PMID:23172916 MGI:5447580 NCBI chr19:14,330,440...14,336,403
Ensembl chr19:14,330,440...14,336,403 		JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO MGI:3052661|MGI:3605621 (MGI:5888939|PMID:28199486) RGD PMID:28199486 MGI:5888939 NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488 		JBrowse link
G Vsx1 visual system homeobox 1 acts_upstream_of_or_within ISO MGI:1859086|MGI:3033929|MGI:3040317 (MGI:3029641|PMID:14745032), (MGI:3039332|PMID:15043821), (MGI:3776945|PMID:18322081) RGD PMID:14745032 PMID:15043821 PMID:18322081 MGI:3029641 MGI:3039332 MGI:3776945 NCBI chr 3:139,514,270...139,521,869
Ensembl chr 3:139,514,270...139,521,869 		JBrowse link
G Vsx2 visual system homeobox 2 acts_upstream_of_or_within ISO MGI:1856112 (MGI:79586|PMID:8630490) RGD PMID:8630490 MGI:79586 NCBI chr 6:104,214,842...104,240,264
Ensembl chr 6:104,217,230...104,240,018 		JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 involved_in ISO (MGI:6214404|PMID:30146259) RGD PMID:30146259 MGI:6214404 NCBI chr 7:89,226,358...89,374,266
Ensembl chr 7:89,226,463...89,374,378 		JBrowse link
retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857429 (MGI:2677551|PMID:14517994) RGD PMID:14517994 MGI:2677551 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of ISO MGI:1857430 (MGI:1336407|PMID:10321489) RGD PMID:10321489 MGI:1336407 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Bhlhe23 basic helix-loop-helix family, member e23 acts_upstream_of ISO MGI:3054837 (MGI:3054140|PMID:15363390) RGD PMID:15363390 MGI:3054140 NCBI chr 3:167,889,009...167,891,223
Ensembl chr 3:167,889,009...167,891,223 		JBrowse link
G Faslg Fas ligand acts_upstream_of_or_within ISO MGI:1856384 (MGI:2677551|PMID:14517994) RGD PMID:14517994 MGI:2677551 NCBI chr13:74,151,519...74,172,760
Ensembl chr13:74,154,954...74,162,215 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO MGI:2682641 (MGI:2680888|PMID:12808454) RGD PMID:12808454 MGI:2680888 NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781 		JBrowse link
retinal cone cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISO (MGI:4437526|PMID:20081859) RGD PMID:20081859 MGI:4437526 NCBI chr 1:15,768,047...15,886,744
Ensembl chr 1:15,762,462...15,891,041 		JBrowse link
G Cabp4 calcium binding protein 4 acts_upstream_of_or_within ISO MGI:3056615 (MGI:3609280|PMID:16249514) RGD PMID:16249514 MGI:3609280 NCBI chr 1:201,428,671...201,442,950
Ensembl chr 1:201,428,672...201,433,172 		JBrowse link
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 acts_upstream_of_or_within ISO MGI:3608770 (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 9:39,447,532...39,497,883
Ensembl chr 9:39,448,034...39,493,183 		JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISO (MGI:5461109|PMID:23001562) RGD PMID:23001562 MGI:5461109 NCBI chr 3:21,542,138...21,564,876
Ensembl chr 3:21,542,221...21,563,294 		JBrowse link
G Dio3 iodothyronine deiodinase 3 acts_upstream_of
acts_upstream_of_or_within		 ISO (MGI:4441081|PMID:20203194)
MGI:2664293 (MGI:4441081|PMID:20203194)		 RGD PMID:20203194 MGI:4441081 NCBI chr 6:129,285,747...129,287,608
Ensembl chr 6:129,285,749...129,286,660 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO MGI:3588845 (MGI:3714271|PMID:17065522), (MGI:4849309|PMID:21052544) RGD PMID:17065522 PMID:21052544 MGI:3714271 MGI:4849309 NCBI chr 2:195,726,371...195,735,866
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Hcn1 hyperpolarization-activated cyclic nucleotide-gated potassium channel 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4849309|PMID:21052544)
GO_REF:0000107		 RGD
Ensembl		 PMID:21052544 GO_REF:0000107 MGI:4849309 NCBI chr 2:49,495,771...49,899,702
Ensembl chr 2:49,495,771...49,899,774 		JBrowse link
G Mir124-1 microRNA 124-1 acts_upstream_of_or_within ISO MGI:3618700|MGI:5307015|MGI:5307017 (MGI:5303045|PMID:21857657) RGD PMID:21857657 MGI:5303045 NCBI chr15:38,842,014...38,842,098
Ensembl chr15:38,842,014...38,842,098 		JBrowse link
G Mir124-2 microRNA 124-2 acts_upstream_of_or_within ISO MGI:2676807 (MGI:5303045|PMID:21857657) RGD PMID:21857657 MGI:5303045 NCBI chr 2:100,134,866...100,134,974
Ensembl chr 2:100,134,866...100,134,974 		JBrowse link
G Mir183 microRNA 183 acts_upstream_of_or_within ISO MGI:2676846|MGI:3619440 (MGI:5469752|PMID:23341629) RGD PMID:23341629 MGI:5469752 NCBI chr 4:58,788,614...58,788,723
Ensembl chr 4:58,788,614...58,788,723 		JBrowse link
G Mir96 microRNA 96 acts_upstream_of_or_within ISO MGI:2676846|MGI:2676847 (MGI:5469752|PMID:23341629) RGD PMID:23341629 MGI:5469752 NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516 		JBrowse link
G Pde6c phosphodiesterase 6C acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 1:235,909,473...235,965,460
Ensembl chr 1:235,909,775...235,965,315 		JBrowse link
G Rorb RAR-related orphan receptor B involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:3652638|PMID:16574740)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:16574740 GO_REF:0000024 GO_REF:0000107 MGI:3652638 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390 		JBrowse link
G Rp1 RP1, axonemal microtubule associated involved_in ISO (MGI:2676521|PMID:14507858) RGD PMID:14507858 MGI:2676521 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363 		JBrowse link
G Thrb thyroid hormone receptor beta acts_upstream_of
involved_in		 ISO
IEA		 (MGI:4441081|PMID:20203194)
GO_REF:0000107		 RGD
Ensembl		 PMID:20203194 GO_REF:0000107 MGI:4441081 NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916 		JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in ISS
IBA
ISO		 GO_REF:0000024
PMID:21873635
(MGI:1349255|PMID:10567740)		 UniProt
RGD		 PMID:10567740 PMID:21873635 GO_REF:0000024 MGI:1349255, RGD:13792537 NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659 		JBrowse link
G Ush1c USH1 protein network component harmonin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671 		JBrowse link
retinal cone cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch receptor 1 acts_upstream_of ISO MGI:1933835|MGI:3052237 (MGI:3617079|PMID:16452096) RGD PMID:16452096 MGI:3617079 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
retinal rod cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISO (MGI:4437526|PMID:20081859) RGD PMID:20081859 MGI:4437526 NCBI chr 1:15,768,047...15,886,744
Ensembl chr 1:15,762,462...15,891,041 		JBrowse link
G Alms1 ALMS1, centrosome and basal body associated protein acts_upstream_of_or_within ISO MGI:3576051 (MGI:3588454|PMID:16000322) RGD PMID:16000322 MGI:3588454 NCBI chr 4:118,125,581...118,226,005
Ensembl chr 4:118,125,607...118,226,005 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (MGI:3044824|PMID:15173597) RGD PMID:15173597 MGI:3044824 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Bhlhe23 basic helix-loop-helix family, member e23 acts_upstream_of_or_within ISO MGI:3054837 (MGI:3814679|PMID:17255172) RGD PMID:17255172 MGI:3814679 NCBI chr 3:167,889,009...167,891,223
Ensembl chr 3:167,889,009...167,891,223 		JBrowse link
G Ccdc66 coiled-coil domain containing 66 acts_upstream_of_or_within ISO MGI:3893603 (MGI:5141557|PMID:21680557) RGD PMID:21680557 MGI:5141557 NCBI chr16:2,662,125...2,694,031
Ensembl chr16:2,662,131...2,694,023 		JBrowse link
G Cfh complement factor H acts_upstream_of_or_within ISO (MGI:3760334|PMID:17921253) RGD PMID:17921253 MGI:3760334 NCBI chr13:51,512,376...51,613,829
Ensembl chr13:51,511,828...51,613,838 		JBrowse link
G Miat myocardial infarction associated transcript acts_upstream_of_or_within ISO MGI:3665263 (MGI:3655931|PMID:16877424) RGD PMID:16877424 MGI:3655931 NCBI chr12:44,414,620...44,429,852 JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (MGI:3769195|PMID:17712420) RGD PMID:17712420 MGI:3769195 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
G Nrl neural retina leucine zipper acts_upstream_of_or_within ISO MGI:2152376 (MGI:2385798|PMID:11694879) RGD PMID:11694879 MGI:2385798 NCBI chr15:29,008,104...29,009,832
Ensembl chr15:29,008,104...29,009,832 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3039928 (MGI:3039190|PMID:10516311)
GO_REF:0000107		 RGD
Ensembl		 PMID:10516311 GO_REF:0000107 MGI:3039190 NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136 		JBrowse link
G Rorb RAR-related orphan receptor B involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:3652638|PMID:16574740), (MGI:4366105|PMID:19805139)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:16574740 PMID:19805139 GO_REF:0000024 GO_REF:0000107 MGI:3652638 MGI:4366105 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390 		JBrowse link
G Rp1 RP1, axonemal microtubule associated involved_in ISO (MGI:2676521|PMID:14507858) RGD PMID:14507858 MGI:2676521 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363 		JBrowse link
G Rpgrip1l Rpgrip1-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Trpm1 transient receptor potential cation channel, subfamily M, member 1 acts_upstream_of_or_within ISO MGI:4421441 (MGI:4420740|PMID:19966281) RGD PMID:19966281 MGI:4420740 NCBI chr 1:117,718,896...117,835,434
Ensembl chr 1:117,718,896...117,834,605 		JBrowse link
retinal rod cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntf ciliary neurotrophic factor involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(MGI:3045481|PMID:15207851)		 Ensembl
RGD		 PMID:15207851 GO_REF:0000107 MGI:3045481 NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877 		JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO MGI:2676199 (MGI:3655326|PMID:9071226) RGD PMID:9071226 MGI:3655326 NCBI chr  X:5,796,487...5,820,934
Ensembl chr  X:5,796,487...5,820,934 		JBrowse link
G Ptn pleiotrophin IMP RGD PMID:16914133 RGD:9831439 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Rorb RAR-related orphan receptor B acts_upstream_of_or_within ISO MGI:2158692 (MGI:5905304|PMID:25296752) RGD PMID:25296752 MGI:5905304 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390 		JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in
acts_upstream_of
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:98371 (MGI:4368088|PMID:19490914)		 UniProt
RGD		 PMID:19490914 GO_REF:0000024 MGI:4368088 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within
involved_in		 ISO
ISS		 MGI:98370 (MGI:4368088|PMID:19490914)
GO_REF:0000024		 RGD
UniProt		 PMID:19490914 GO_REF:0000024 MGI:4368088 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 acts_upstream_of_or_within ISO (MGI:3045481|PMID:15207851) RGD PMID:15207851 MGI:3045481 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
retinal rod cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casz1 castor zinc finger 1 acts_upstream_of_or_within ISO MGI:3052661|MGI:4841554 (MGI:5629913|PMID:25654255) RGD PMID:25654255 MGI:5629913 NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400 		JBrowse link
rod bipolar cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (MGI:6219748|PMID:26607664) RGD PMID:26607664 MGI:6219748 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
G Ptn pleiotrophin IEP RGD PMID:16914133 RGD:9831439 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
semicircular canal formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
semicircular canal fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (MGI:3575490|PMID:15765517) RGD PMID:15765517 MGI:3575490 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
semicircular canal morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:98493 (MGI:4397600|PMID:19855134) RGD PMID:19855134 MGI:4397600 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:1857803 (MGI:1335261|PMID:10072433) RGD PMID:10072433 MGI:1335261 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:95517 (MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:3720541 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgf3 fibroblast growth factor 3 acts_upstream_of_or_within ISO MGI:1099809 (MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:3720541 NCBI chr 1:200,001,261...200,005,187
Ensembl chr 1:200,001,261...200,005,187 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (MGI:2157256|PMID:11784868) RGD PMID:11784868 MGI:2157256 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733 		JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within
involved_in		 ISO
ISS		 MGI:2444748 (MGI:4397600|PMID:19855134)
GO_REF:0000024		 RGD
UniProt		 PMID:19855134 GO_REF:0000024 MGI:4397600 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO (MGI:6710296|PMID:33795231) RGD PMID:33795231 MGI:6710296 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1861230 (MGI:5294688|PMID:21980308)
GO_REF:0000107		 RGD
Ensembl		 PMID:21980308 GO_REF:0000107 MGI:5294688 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
tongue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEP RGD PMID:16828469 RGD:2289002 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in ISO (MGI:3809313|PMID:18816858) RGD PMID:18816858 MGI:3809313 NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO MGI:3531090 (MGI:5912570|PMID:27158779) RGD PMID:27158779 MGI:5912570 NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530 		JBrowse link
G Hoxc13 homeobox C13 acts_upstream_of_or_within ISO MGI:1926422 (MGI:1195385|PMID:9420327) RGD PMID:9420327 MGI:1195385 NCBI chr 7:134,058,640...134,065,479
Ensembl chr 7:134,058,640...134,064,800 		JBrowse link
G Intu inturned planar cell polarity protein involved_in IEA
ISO		 GO_REF:0000107
(PMID:27158779)		 Ensembl
RGD		 PMID:27158779 GO_REF:0000107 NCBI chr 2:123,600,972...123,685,331
Ensembl chr 2:123,609,807...123,682,676 		JBrowse link
G Krt13 keratin 13 IEP RGD PMID:16271699 RGD:1600171 NCBI chr10:85,052,122...85,056,032
Ensembl chr10:85,051,889...85,056,084 		JBrowse link
G Shh sonic hedgehog signaling molecule IMP RGD PMID:15581865 RGD:1580345 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISO
ISS		 (MGI:3809313|PMID:18816858)
GO_REF:0000024		 RGD
UniProt		 PMID:18816858 GO_REF:0000024 MGI:3809313 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within
involved_in		 ISO MGI:5558100 (MGI:5912570|PMID:27158779)
(PMID:27158779)		 RGD PMID:27158779 MGI:5912570 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113 		JBrowse link
vestibular receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptprq protein tyrosine phosphatase, receptor type, Q involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2679316 (MGI:5315778|PMID:22357859)		 Ensembl
RGD		 PMID:22357859 GO_REF:0000107 MGI:5315778 NCBI chr 7:42,837,109...43,016,917
Ensembl chr 7:42,837,109...43,016,917 		JBrowse link
vestibular receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pls1 plastin 1 involved_in ISO (MGI:5608770|PMID:25124451) RGD PMID:25124451 MGI:5608770 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19746
    developmental process 6931
      anatomical structure morphogenesis 2938
        animal organ morphogenesis 1160
          sensory organ morphogenesis 333
            ear morphogenesis + 146
            eye morphogenesis + 194
            nematode male tail mating organ morphogenesis 0
            nose morphogenesis 2
            ocellus morphogenesis 0
            taste bud morphogenesis + 0
            tongue morphogenesis + 14
Path 2
Term Annotations click to browse term
  biological_process 19746
    developmental process 6931
      anatomical structure development 6386
        animal organ development 3647
          sensory organ development 720
            sensory organ morphogenesis 333
              ear morphogenesis + 146
              eye morphogenesis + 194
              nematode male tail mating organ morphogenesis 0
              nose morphogenesis 2
              ocellus morphogenesis 0
              taste bud morphogenesis + 0
              tongue morphogenesis + 14
paths to the root