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ONTOLOGY REPORT - ANNOTATIONS


Term:inflammatory response to wounding
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Accession:GO:0090594 term browser browse the term
Definition:The immediate defensive reaction by vertebrate tissue to injury caused by chemical or physical agents.



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inflammatory response to wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5 complement C5 acts_upstream_of_or_within ISO (MGI:5430458|PMID:21148255) RGD PMID:21148255 MGI:5430458 NCBI chr 3:18,270,696...18,361,994
Ensembl chr 3:18,270,696...18,361,994
JBrowse link
G Ccr2 C-C motif chemokine receptor 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:6155533|PMID:29632244), (MGI:6274962|PMID:24806994)
UniProt
RGD
PMID:24806994 PMID:29632244 GO_REF:0000024 MGI:6155533 MGI:6274962 NCBI chr 8:123,734,465...123,742,483
Ensembl chr 8:123,734,430...123,742,100
JBrowse link
G Cfh complement factor H acts_upstream_of_or_within ISO (MGI:5430458|PMID:21148255) RGD PMID:21148255 MGI:5430458 NCBI chr13:51,512,376...51,613,829
Ensembl chr13:51,511,828...51,613,838
JBrowse link
G Wdr83 WD repeat domain 83 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4367006 (MGI:5812873|PMID:25550320), (MGI:6282238|PMID:29402223)
Ensembl
RGD
PMID:25550320 PMID:29402223 GO_REF:0000107 MGI:5812873 MGI:6282238 NCBI chr19:23,076,948...23,082,569
Ensembl chr19:23,077,010...23,082,563
JBrowse link
connective tissue replacement involved in inflammatory response wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec10a C-type lectin domain containing 10A acts_upstream_of_or_within ISO MGI:2183546 (MGI:3621265|PMID:15784728) RGD PMID:15784728 MGI:3621265 NCBI chr10:54,876,244...54,880,439
Ensembl chr10:54,876,260...54,880,435
JBrowse link
G F2r coagulation factor II (thrombin) receptor involved_in ISO
ISS
IEA
(PMID:9639571)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:9639571 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:26,869,343...26,885,856
Ensembl chr 2:26,868,404...26,885,870
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in IEA
ISO
GO_REF:0000107
(MGI:3772289|PMID:18037992)
Ensembl
RGD
PMID:18037992 GO_REF:0000107 MGI:3772289 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Il1a interleukin 1 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3621265|PMID:15784728)
Ensembl
RGD
PMID:15784728 GO_REF:0000107 MGI:3621265 NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 acts_upstream_of_or_within ISO (MGI:5462501|PMID:23100531) RGD PMID:23100531 MGI:5462501 NCBI chr  X:1,212,969...1,217,714
Ensembl chr  X:1,212,972...1,217,664
JBrowse link
negative regulation of connective tissue replacement involved in inflammatory response wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in ISO (MGI:6101245|PMID:25296984) RGD PMID:25296984 MGI:6101245 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
JBrowse link
G Ager advanced glycosylation end product-specific receptor acts_upstream_of_or_within ISO MGI:2451038 (MGI:3774727|PMID:18245812) RGD PMID:18245812 MGI:3774727 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of_or_within IDA PMID:29695452 BHF-UCL PMID:29695452 RGD:150521636 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
negative regulation of inflammatory response to wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule involved_in ISO UniProtKB:Q80ZE3|UniProtKB:Q96LC7 (MGI:5913663|PMID:19264983) RGD PMID:19264983 MGI:5913663 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6478067|PMID:32460388)
UniProt
RGD
PMID:32460388 GO_REF:0000024 MGI:6478067 NCBI chr10:62,342,082...62,356,379
Ensembl chr10:62,342,299...62,356,373
JBrowse link
G Mdk midkine involved_in ISS
ISO
GO_REF:0000024
(MGI:3761216|PMID:17015789)
UniProt
RGD
PMID:17015789 GO_REF:0000024 MGI:3761216 NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130
JBrowse link
G Siglec10 sialic acid binding Ig-like lectin 10 involved_in ISO UniProtKB:P24807 (PMID:19264983)
UniProtKB:P24807 (MGI:5913663|PMID:19264983)
RGD PMID:19264983 MGI:5913663 NCBI chr 1:93,817,301...93,826,376
Ensembl chr 1:93,817,335...93,825,931
JBrowse link
positive regulation of inflammatory response to wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule involved_in ISO (MGI:5913663|PMID:19264983) RGD PMID:19264983 MGI:5913663 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Grn granulin precursor involved_in ISS
ISO
GO_REF:0000024
(MGI:6274947|PMID:12524533)
UniProt
RGD
PMID:12524533 GO_REF:0000024 MGI:6274947 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
JBrowse link
G Mdk midkine involved_in ISS
ISO
GO_REF:0000024
(MGI:5568278|PMID:24458438), (MGI:5897914|PMID:28183532)
UniProt
RGD
PMID:24458438 PMID:28183532 GO_REF:0000024 MGI:5568278 MGI:5897914 NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130
JBrowse link
regulation of inflammatory response to wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6392964|PMID:28965882)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:28965882 GO_REF:0000024 GO_REF:0000107 MGI:6392964 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
JBrowse link
wound healing involved in inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule (Indian blood group) acts_upstream_of_or_within ISO MGI:2181292 (MGI:3653299|PMID:11935029) RGD PMID:11935029 MGI:3653299 NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620
JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:9884342) RGD PMID:9884342 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of_or_within_negative_effect ISO (MGI:5462034|PMID:21880694) RGD PMID:21880694 MGI:5462034 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Tlr4 toll-like receptor 4 involved_in ISO
IEA
(MGI:5462034|PMID:21880694)
GO_REF:0000107
RGD
Ensembl
PMID:21880694 GO_REF:0000107 MGI:5462034 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18737
    response to stimulus 10209
      response to stress 4153
        response to wounding 659
          inflammatory response to wounding 21
            negative regulation of inflammatory response to wounding 4
            positive regulation of inflammatory response to wounding 3
            regulation of inflammatory response to wounding + 6
            wound healing involved in inflammatory response + 11
Path 2
Term Annotations click to browse term
  biological_process 18737
    response to stimulus 10209
      response to stress 4153
        defense response 1728
          inflammatory response 815
            inflammatory response to wounding 21
              negative regulation of inflammatory response to wounding 4
              positive regulation of inflammatory response to wounding 3
              regulation of inflammatory response to wounding + 6
              wound healing involved in inflammatory response + 11
paths to the root