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ONTOLOGY REPORT - ANNOTATIONS


Term:epiboly involved in wound healing
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Accession:GO:0090505 term browser browse the term
Definition:The expansion of one cell sheet over other cells involved in wound healing.



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negative regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
positive regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fermt1 FERM domain containing kindlin 1 involved_in ISO UniProtKB:Q96AC1 (PMID:21356350) RGD PMID:21356350 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:21356350) RGD PMID:21356350 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Rreb1 ras responsive element binding protein 1 involved_in ISO (PMID:18394891) RGD PMID:18394891 NCBI chr17:26,876,686...27,002,615
Ensembl chr17:26,876,697...27,002,615
JBrowse link
wound healing, spreading of cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3803424|PMID:18502760)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18502760 GO_REF:0000024 GO_REF:0000107 MGI:3803424 NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298
JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 involved_in ISO (PMID:26466680), (PMID:26578515) RGD PMID:26466680 PMID:26578515 NCBI chr19:33,571,255...33,586,783
Ensembl chr19:33,574,257...33,586,965
JBrowse link
G Ccn1 cellular communication network factor 1 involved_in ISO
IEA
(PMID:20675382)
GO_REF:0000107
RGD
Ensembl
PMID:20675382 GO_REF:0000107 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
JBrowse link
G Cd151 CD151 molecule (Raph blood group) acts_upstream_of_or_within ISO (PMID:17716972) RGD PMID:17716972 NCBI chr 1:196,564,744...196,568,753
Ensembl chr 1:196,565,181...196,568,753
JBrowse link
G Cd44 CD44 molecule (Indian blood group) involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:20962267)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20962267 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:16291724)
UniProt
RGD
PMID:16291724 GO_REF:0000024 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 involved_in ISO
IEA
ISS
(PMID:12065315)
GO_REF:0000107
(MGI:3629583|PMID:12065315)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12065315 GO_REF:0000024 GO_REF:0000107 MGI:3629583 NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468
JBrowse link
G Flna filamin A involved_in ISO (PMID:16291724) RGD PMID:16291724 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 NOT|involved_in ISO (PMID:16636079) RGD PMID:16636079 NCBI chr15:50,443,300...50,544,682
Ensembl chr15:50,488,149...50,544,680
JBrowse link
G Mrtfa myocardin related transcription factor A involved_in ISO (PMID:29391067) RGD PMID:29391067 NCBI chr 7:112,544,312...112,714,431
Ensembl chr 7:112,544,312...112,714,418
JBrowse link
G Pard3 par-3 family cell polarity regulator acts_upstream_of_or_within ISO (MGI:4359132|PMID:19540120) RGD PMID:19540120 MGI:4359132 NCBI chr19:55,080,282...55,630,111
Ensembl chr19:55,080,282...55,629,778
JBrowse link
G Pdcd10 programmed cell death 10 involved_in ISO (PMID:20332113) RGD PMID:20332113 NCBI chr 2:160,303,465...160,346,086
Ensembl chr 2:160,303,449...160,346,018
JBrowse link
G Pdpn podoplanin involved_in ISS
ISO
GO_REF:0000024
(PMID:20962267)
UniProt
RGD
PMID:20962267 GO_REF:0000024 NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
JBrowse link
G Rhoa ras homolog family member A involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Rhoc ras homolog family member C involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 2:192,287,065...192,293,292
Ensembl chr 2:192,287,130...192,295,306
JBrowse link
G Tmeff2 transmembrane protein with EGF-like and two follistatin-like domains 2 acts_upstream_of_or_within ISO (PMID:24632071) RGD PMID:24632071 NCBI chr 9:50,445,550...50,733,482
Ensembl chr 9:50,436,079...50,733,475
JBrowse link
G Tor1a torsin family 1, member A involved_in ISS
ISO
GO_REF:0000024
(MGI:3814961|PMID:18827015)
UniProt
RGD
PMID:18827015 GO_REF:0000024 MGI:3814961 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
JBrowse link
wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 involved_in ISO (PMID:12453878) RGD PMID:12453878 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO
IEA
(PMID:14970227)
GO_REF:0000107
RGD
Ensembl
PMID:14970227 GO_REF:0000107 NCBI chr 6:40,872,936...40,920,700
Ensembl chr 6:40,872,856...40,920,639
JBrowse link
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO MGI:3578221 (MGI:3577694|PMID:15728191) RGD PMID:15728191 MGI:3577694 NCBI chr15:28,019,775...28,031,537
Ensembl chr15:28,019,778...28,030,021
JBrowse link
G Arhgap24 Rho GTPase activating protein 24 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5297730|PMID:21911940)
RGD PMID:21911940 PMID:21873635 MGI:5297730, RGD:13792537 NCBI chr14:6,800,631...7,184,001
Ensembl chr14:6,800,631...7,183,823
JBrowse link
G Col5a1 collagen type V alpha 1 chain involved_in ISO
IEA
(PMID:18305566)
GO_REF:0000107
RGD
Ensembl
PMID:18305566 GO_REF:0000107 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588
JBrowse link
G Hbegf heparin-binding EGF-like growth factor involved_in ISO (MGI:3580979|PMID:15923649) RGD PMID:15923649 MGI:3580979 NCBI chr18:28,106,284...28,116,167
Ensembl chr18:28,105,760...28,116,441
JBrowse link
G Itga5 integrin subunit alpha 5 involved_in ISO (PMID:14970227) RGD PMID:14970227 NCBI chr 7:134,478,963...134,502,837
Ensembl chr 7:134,478,968...134,502,837
JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in IEA
ISO
GO_REF:0000107
(PMID:15802269)
Ensembl
RGD
PMID:15802269 GO_REF:0000107 NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611
JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926381 (MGI:4868690|PMID:19769717)
Ensembl
RGD
PMID:19769717 GO_REF:0000107 MGI:4868690 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
JBrowse link
G Plet1 placenta expressed transcript 1 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:4453442|PMID:20130590)
PMID:21873635
UniProt
RGD
PMID:20130590 PMID:21873635 GO_REF:0000024 MGI:4453442, RGD:13792537 NCBI chr 8:50,842,210...50,854,015
Ensembl chr 8:50,841,854...50,853,659
JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta IMP RGD PMID:16844921 RGD:1624146 NCBI chr 1:176,430,063...176,484,451
Ensembl chr 1:176,430,103...176,484,451
JBrowse link
G Scnn1g sodium channel epithelial 1 subunit gamma IMP RGD PMID:16844921 RGD:1624146 NCBI chr 1:176,304,942...176,338,816
Ensembl chr 1:176,304,942...176,338,816
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:15802269) RGD PMID:15802269 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19390
    response to stimulus 10323
      response to stress 4024
        response to wounding 633
          wound healing 440
            epiboly involved in wound healing 38
              wound healing, spreading of cells + 38
Path 2
Term Annotations click to browse term
  biological_process 19390
    developmental process 6778
      anatomical structure development 6203
        anatomical structure morphogenesis 2891
          tissue morphogenesis 705
            morphogenesis of an epithelium 592
              morphogenesis of an epithelial sheet 65
                epiboly 39
                  epiboly involved in wound healing 38
                    wound healing, spreading of cells + 38
paths to the root