Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:RNA phosphodiester bond hydrolysis, endonucleolytic
go back to main search page
Accession:GO:0090502 term browser browse the term
Definition:The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.


show annotations for term's descendants       view all columns           Sort by:
 
RNA phosphodiester bond hydrolysis, endonucleolytic term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DICER1 dicer 1, ribonuclease III JBrowse link 14 75,709,029 75,780,779 RGD:9068941
G LACTB2 lactamase beta 2 JBrowse link 8 67,162,667 67,194,560 RGD:9068941
G NUDT16 nudix hydrolase 16 JBrowse link 3 128,466,119 128,473,186 RGD:9068941
G SLFN14 schlafen family member 14 JBrowse link 17 21,232,934 21,250,368 RGD:9068941
G ZC3H12A zinc finger CCCH-type containing 12A JBrowse link 1 36,743,341 36,753,261 RGD:9068941
cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BOP1 BOP1 ribosomal biogenesis factor JBrowse link 8 141,024,518 141,055,173 RGD:9068941
G NPM1 nucleophosmin 1 JBrowse link 5 166,735,904 166,756,321 RGD:9068941
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FCF1 FCF1 rRNA-processing protein JBrowse link 14 55,265,211 55,288,827 RGD:9068941
G RCL1 RNA terminal phosphate cyclase like 1 JBrowse link 9 4,626,981 4,695,444 RGD:9068941
G UTP23 UTP23 small subunit processome component JBrowse link 8 113,441,014 113,462,103 RGD:9068941
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FCF1 FCF1 rRNA-processing protein JBrowse link 14 55,265,211 55,288,827 RGD:9068941
G RCL1 RNA terminal phosphate cyclase like 1 JBrowse link 9 4,626,981 4,695,444 RGD:9068941
mitochondrial tRNA 3'-trailer cleavage, endonucleolytic term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ELAC2 elaC ribonuclease Z 2 JBrowse link 17 38,631,454 38,657,855 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12490
    metabolic process 7937
      organic substance metabolic process 7623
        macromolecule metabolic process 6594
          nucleic acid metabolic process 3378
            nucleic acid phosphodiester bond hydrolysis 76
              RNA phosphodiester bond hydrolysis 32
                RNA phosphodiester bond hydrolysis, endonucleolytic 11
                  endonucleolytic cleavage involved in rRNA processing + 5
                  endonucleolytic cleavage involved in tRNA processing + 1
                  snoRNA 3'-end cleavage 0
Path 2
Term Annotations click to browse term
  biological_process 12490
    metabolic process 7937
      cellular metabolic process 7295
        cellular aromatic compound metabolic process 3854
          nucleobase-containing compound metabolic process 3680
            nucleic acid metabolic process 3378
              RNA metabolic process 3000
                RNA phosphodiester bond hydrolysis 32
                  RNA phosphodiester bond hydrolysis, endonucleolytic 11
                    endonucleolytic cleavage involved in rRNA processing + 5
                    endonucleolytic cleavage involved in tRNA processing + 1
                    snoRNA 3'-end cleavage 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.