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ONTOLOGY REPORT - ANNOTATIONS


Term:organophosphate biosynthetic process
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Accession:GO:0090407 term browser browse the term
Definition:The chemical reactions and pathways resulting in the biosynthesis of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.


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'de novo' IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:9332377 RGD:70804 NCBI chrNW_004936586:1,782,581...1,809,458 JBrowse link
'de novo' NAD biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nadsyn1 NAD synthetase 1 involved_in ISO (PMID:31883644) UniProt PMID:31883644 NCBI chrNW_004936794:1,394,975...1,423,807 JBrowse link
1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISO (PMID:26774281) UniProt PMID:26774281 NCBI chrNW_004936520:5,383,737...5,540,176 JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISO (PMID:26774281) UniProt PMID:26774281 NCBI chrNW_004936490:14,168,951...14,201,712 JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in ISO (PMID:26774281) UniProt PMID:26774281 NCBI chrNW_004936646:1,737,088...1,748,056 JBrowse link
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14747722), (PMID:23207770)
(MGI:2448448|PMID:12414806)
UniProt
MGI
PMID:12414806 PMID:14747722 PMID:23207770 MGI:2448448 NCBI chrNW_004936818:863,969...975,562 JBrowse link
5-phosphoribose 1-diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prps1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:9366267 RGD:5134981 NCBI chrNW_004936499:7,114,838...7,136,468 JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:9366267 RGD:5134981 NCBI chrNW_004936470:2,547,038...2,576,951 JBrowse link
G Pygl glycogen phosphorylase L ISO RGD PMID:15571236 RGD:1599376 NCBI chrNW_004936495:14,692,688...14,728,663 JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Acly ATP citrate lyase involved_in ISO (PMID:1371749) BHF-UCL PMID:1371749 NCBI chrNW_004936490:16,758,001...16,798,152 JBrowse link
G Acss1 acyl-CoA synthetase short chain family member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:16788062)
(MGI:2151932|PMID:11150295)
UniProt
MGI
PMID:11150295 PMID:16788062 MGI:2151932 NCBI chrNW_004936620:739,633...800,472 JBrowse link
G Acss2 acyl-CoA synthetase short chain family member 2 acts_upstream_of_or_within ISO (MGI:2151932|PMID:11150295) MGI PMID:11150295 MGI:2151932 NCBI chrNW_004936561:5,794,685...5,842,619 JBrowse link
G Dip2a disco interacting protein 2 homolog A involved_in ISO (MGI:6478983|PMID:30672040) UniProt PMID:30672040 MGI:6478983 NCBI chrNW_004936778:49,130...123,345 JBrowse link
G Mlycd malonyl-CoA decarboxylase involved_in ISO (PMID:10417274), (PMID:10455107), (PMID:9869665) RGD
UniProt
PMID:9869665 PMID:10417274 PMID:10455107 PMID:17316539 RGD:1600790 NCBI chrNW_004936641:3,836,418...3,846,485 JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO (PMID:29754768) UniProt PMID:29754768 NCBI chrNW_004936474:23,867,117...23,870,832 JBrowse link
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlat dihydrolipoamide S-acetyltransferase ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004936612:2,395,452...2,437,592 JBrowse link
G Dld dihydrolipoamide dehydrogenase ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004936479:16,247,230...16,271,597 JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 involved_in ISO (PMID:19081061) RGD
UniProt
PMID:7487891 PMID:19081061 RGD:1599112 NCBI chrNW_004936844:889,720...906,631 JBrowse link
G Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004936717:2,377,982...2,379,137 JBrowse link
G Pdhb pyruvate dehydrogenase E1 subunit beta involved_in ISO (PMID:19081061) RGD
UniProt
PMID:7487891 PMID:19081061 RGD:1599112 NCBI chrNW_004936473:2,580,642...2,586,266 JBrowse link
ADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chrNW_004936487:15,507,663...15,517,401 JBrowse link
G Ak2 adenylate kinase 2 ISO RGD PMID:5123889 RGD:5490208 NCBI chrNW_004936474:15,887,014...15,908,522 JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:5010295 PMID:5123889 RGD:5490208 RGD:5490216 NCBI chrNW_004936503:497,391...517,011 JBrowse link
AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (PMID:11428554) RGD
UniProt
PMID:3759987 PMID:11428554 RGD:5135303 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Adss1 adenylosuccinate synthase 1 involved_in ISO (PMID:15786719) UniProt PMID:15786719 NCBI chrNW_004936621:655,004...667,608 JBrowse link
G Adss2 adenylosuccinate synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:2004783)
(MGI:64874|PMID:8308018)
UniProt
MGI
PMID:2004783 PMID:8308018 MGI:64874 NCBI chrNW_004936526:6,342,233...6,380,736 JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004936499:7,114,838...7,136,468 JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004936470:2,547,038...2,576,951 JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 ISO RGD PMID:5484813 RGD:2301093 NCBI chrNW_004936503:497,391...517,011 JBrowse link
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
AMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aprt adenine phosphoribosyltransferase involved_in
acts_upstream_of_or_within
ISO (MGI:1312996|PMID:9776749)
(MGI:85816|PMID:8864750)
MGI PMID:8864750 PMID:9776749 MGI:1312996 MGI:85816 NCBI chrNW_004936641:913,674...916,312 JBrowse link
ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004936517:743,036...752,836 JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:17510399), (PMID:21106936) CAFA PMID:17510399 PMID:21106936 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 ISO RGD PMID:22209705 RGD:13800744 NCBI chrNW_004936490:12,549,045...12,551,895 JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP ISO RGD PMID:7864899 RGD:14696824 NCBI chrNW_004936500:8,444,681...8,454,694 JBrowse link
G Dguok deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chrNW_004936556:226,643...263,517 JBrowse link
G LOC101970352 L-lactate dehydrogenase C chain acts_upstream_of_or_within ISO (MGI:3775056|PMID:18367675) MGI PMID:18367675 MGI:3775056 NCBI chrNW_004936528:827,322...862,832 JBrowse link
G Pklr pyruvate kinase L/R ISO RGD PMID:4273555 PMID:5492954 RGD:2302789 RGD:2302790 NCBI chrNW_004936580:4,770,977...4,799,316 JBrowse link
G Pkm pyruvate kinase M1/2 ISO RGD PMID:4273555 RGD:2302790 NCBI chrNW_004936471:31,589,322...31,617,891 JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in ISO (PMID:12851387) UniProt PMID:12851387 NCBI chrNW_004936585:4,061,297...4,215,912 JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:10513816) BHF-UCL PMID:10513816 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
attachment of GPI anchor to protein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pigs phosphatidylinositol glycan anchor biosynthesis class S involved_in ISO (MGI:3688056|PMID:11483512) UniProt PMID:11483512 MGI:3688056 NCBI chrNW_004936538:4,779,325...4,796,960 JBrowse link
G Pigt phosphatidylinositol glycan anchor biosynthesis class T involved_in ISO (MGI:3688056|PMID:11483512) UniProt PMID:11483512 MGI:3688056 NCBI chrNW_004936514:7,471,134...7,481,183 JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis class U involved_in ISO (PMID:12802054) UniProt PMID:12802054 NCBI chrNW_004936561:6,013,145...6,104,548 JBrowse link
cAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 ISO RGD PMID:14985420 RGD:2312640 NCBI chrNW_004936478:20,310,509...20,477,506 JBrowse link
G Adcy10 adenylate cyclase 10 involved_in ISO (PMID:12609998), (PMID:15659711) RGD
UniProt
PMID:7225326 PMID:9874775 PMID:12609998 PMID:15659711 PMID:16627466 PMID:16964251 RGD:1299450 RGD:2313171 RGD:2313173 RGD:2313177 NCBI chrNW_004936481:18,274,158...18,330,136 JBrowse link
G Adcy2 adenylate cyclase 2 involved_in ISO PMID:18164588
PMID:10427002
RGD
BHF-UCL
UniProt
PMID:10427002 PMID:11738086 PMID:12711600 PMID:18164588 RGD:10400857 RGD:2312641 RGD:2312674 RGD:8553431 NCBI chrNW_004936643:47,830...338,891 JBrowse link
G Adcy3 adenylate cyclase 3 involved_in ISO (MGI:1889935|PMID:11055432)
PMID:24363043
RGD
UniProt
PMID:11055432 PMID:12711600 PMID:24363043 MGI:1889935 RGD:10400870 RGD:2312674 NCBI chrNW_004936493:7,250,194...7,333,433 JBrowse link
G Adcy4 adenylate cyclase 4 involved_in ISO PMID:8900209 RGD
BHF-UCL
PMID:8900209 PMID:11738086 PMID:12711600 RGD:2312641 RGD:2312674 RGD:8554340 NCBI chrNW_004936722:213,916...230,802 JBrowse link
G Adcy5 adenylate cyclase 5 involved_in ISO (PMID:15385642), (PMID:24700542)
(PMID:24740569)
RGD
UniProt
PMID:10894801 PMID:11738086 PMID:12711600 PMID:15385642 PMID:24700542 PMID:24740569 RGD:2312641 RGD:2312674 RGD:2315006 NCBI chrNW_004936725:1,751,272...1,897,937 JBrowse link
G Adcy6 adenylate cyclase 6 involved_in ISO (MGI:4457984|PMID:20466003)
(PMID:17916776), (PMID:18403039)
RGD
UniProt
PMID:10866989 PMID:10894801 PMID:11738086 PMID:12711600 PMID:15579502 PMID:15961389 PMID:17916776 PMID:18403039 PMID:18971210 PMID:20466003 MGI:4457984 RGD:1598749 RGD:2312641 RGD:2312654 RGD:2312674 RGD:2312678 RGD:2313211 RGD:2315006 NCBI chrNW_004936512:6,612,708...6,629,202 JBrowse link
G Adcy7 adenylate cyclase 7 involved_in ISO (PMID:11113152), (PMID:17760784) RGD
UniProt
PMID:11113152 PMID:12711600 PMID:17760784 RGD:2312674 NCBI chrNW_004936475:3,368,069...3,393,306 JBrowse link
G Adcy8 adenylate cyclase 8 ISO RGD PMID:16741924 PMID:19305019 PMID:19444869 RGD:2312769 RGD:2312785 RGD:7241269 NCBI chrNW_004936470:17,831,644...18,047,868 JBrowse link
G Adcy9 adenylate cyclase 9 acts_upstream_of_or_within
involved_in
ISO (MGI:76465|PMID:7575502), (MGI:80863|PMID:8662814)
(PMID:10987815), (PMID:9628827)
RGD
MGI
UniProt
PMID:7575502 PMID:8662814 PMID:9628827 PMID:10987815 PMID:19444869 MGI:76465 MGI:80863 RGD:2312785 NCBI chrNW_004936694:336,269...449,490 JBrowse link
carbamoyl phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cps1 carbamoyl-phosphate synthase 1 involved_in ISO (PMID:21120950), (PMID:7416778) UniProt PMID:7416778 PMID:21120950 NCBI chrNW_004936586:5,739,038...5,850,317 JBrowse link
cardiolipin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g6 phospholipase A2 group VI involved_in ISO (PMID:19164547) UniProt PMID:19164547 NCBI chrNW_004936492:3,011,752...3,060,962 JBrowse link
G Plscr3 phospholipid scramblase 3 involved_in ISO (PMID:16939411) UniProt PMID:16939411 NCBI chrNW_004936595:674,754...679,979 JBrowse link
G Ptpmt1 protein tyrosine phosphatase mitochondrial 1 involved_in ISO (MGI:5288296|PMID:21641550) UniProt PMID:21641550 MGI:5288296 NCBI chrNW_004936562:1,680,131...1,689,125 JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004936596:3,426,807...3,451,259 JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:11118295), (PMID:16873891), (PMID:17043667), (PMID:19164547) HGNC-UCL PMID:11118295 PMID:16873891 PMID:17043667 PMID:19164547 NCBI chrNW_004936809:1,160,265...1,168,956 JBrowse link
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chrNW_004936474:28,147,459...28,180,779 JBrowse link
CDP-choline pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcyt1a phosphate cytidylyltransferase 1A, choline involved_in ISO (PMID:10480912)
(MGI:2667298|PMID:12842190)
PMID:8185307
PMID:19783652
PMID:8381041
UniProt PMID:8185307 PMID:8381041 PMID:10480912 PMID:12842190 PMID:19783652 MGI:2667298 RGD:39458015 RGD:729578 RGD:8553740 NCBI chrNW_004936784:884,751...938,901 JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline involved_in ISO (PMID:10480912)
(MGI:2667298|PMID:12842190)
UniProt PMID:10480912 PMID:12842190 MGI:2667298 NCBI chrNW_004936624:31,678...125,318 JBrowse link
CDP-diacylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cds1 CDP-diacylglycerol synthase 1 involved_in ISO (PMID:25375833), (PMID:9407135) UniProt PMID:9407135 PMID:25375833 NCBI chrNW_004936738:160,346...227,687 JBrowse link
G Cds2 CDP-diacylglycerol synthase 2 involved_in ISO (PMID:25375833) UniProt PMID:25375833 NCBI chrNW_004936485:13,684,609...13,754,357 JBrowse link
ceramide phosphoethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Samd8 sterile alpha motif domain containing 8 acts_upstream_of_or_within ISO (MGI:5707904|PMID:25667419) MGI PMID:25667419 MGI:5707904 NCBI chrNW_004936521:4,170,016...4,229,877 JBrowse link
G Sgms2 sphingomyelin synthase 2 acts_upstream_of_or_within ISO (MGI:5707904|PMID:25667419) MGI PMID:25667419 MGI:5707904 NCBI chrNW_004936818:687,695...726,123 JBrowse link
cGMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 involved_in
acts_upstream_of_or_within
ISO (PMID:23505436)
(MGI:3640061|PMID:16614755)
UniProt
MGI
PMID:16614755 PMID:23505436 MGI:3640061 NCBI chrNW_004936576:2,353,874...2,411,747 JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 involved_in ISO (PMID:23505436) UniProt PMID:23505436 NCBI chrNW_004936576:2,427,451...2,469,946 JBrowse link
G Gucy2d guanylate cyclase 2D, retinal involved_in ISO (MGI:5049799|PMID:21598940) UniProt PMID:21598940 MGI:5049799 NCBI chrNW_004936595:1,235,747...1,250,294 JBrowse link
G Nppa natriuretic peptide A acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004936474:671,362...673,610 JBrowse link
G Nppb natriuretic peptide B acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004936474:683,325...684,662 JBrowse link
G Nppc natriuretic peptide C acts_upstream_of ISO (PMID:1672777)
(MGI:2177134|PMID:11259675)
GO_Central PMID:1672777 PMID:11259675 MGI:2177134 NCBI chrNW_004936525:5,092,675...5,099,344 JBrowse link
G Npr1 natriuretic peptide receptor 1 involved_in ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004936580:3,479,858...3,496,896 JBrowse link
G Npr2 natriuretic peptide receptor 2 acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004936524:3,779,398...3,798,074 JBrowse link
CMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
coenzyme A biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Acot7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004936623:1,112,021...1,191,190 JBrowse link
G Coasy Coenzyme A synthase involved_in
acts_upstream_of_or_within
ISO (PMID:11923312)
(MGI:2181228|PMID:11980892)
UniProt
MGI
PMID:11923312 PMID:11980892 MGI:2181228 NCBI chrNW_004936490:17,318,873...17,323,080 JBrowse link
G Pank1 pantothenate kinase 1 acts_upstream_of_or_within ISO (MGI:4461354|PMID:20559429), (MGI:5446555|PMID:22815849)
(MGI:3607004|PMID:16040613)
MGI PMID:16040613 PMID:20559429 PMID:22815849 MGI:3607004 MGI:4461354 MGI:5446555 NCBI chrNW_004936601:4,578,132...4,639,305 JBrowse link
G Pank2 pantothenate kinase 2 acts_upstream_of_or_within ISO (MGI:5446555|PMID:22815849) MGI PMID:22815849 MGI:5446555 NCBI chrNW_004936485:14,785,050...14,804,258 JBrowse link
G Pank3 pantothenate kinase 3 involved_in
acts_upstream_of_or_within
ISO (PMID:30927326)
(MGI:3607004|PMID:16040613)
(PMID:20797618)
UniProt
MGI
PMID:16040613 PMID:20797618 PMID:30927326 MGI:3607004 NCBI chrNW_004936622:810,016...836,103 JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO (PMID:11923312)
(PMID:29754768)
UniProt PMID:11923312 PMID:29754768 NCBI chrNW_004936474:23,867,117...23,870,832 JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 involved_in ISO (PMID:24870241)
(PMID:16179339)
UniProt PMID:16179339 PMID:24870241 NCBI chrNW_004936474:22,611,037...22,633,208 JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 ISO RGD PMID:1316151 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182 JBrowse link
cyclic purine nucleotide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 involved_in ISO (PMID:23911318) UniProt PMID:23911318 NCBI chrNW_004936704:1,092,180...1,111,722 JBrowse link
dADP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
dAMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
dATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase acts_upstream_of_or_within ISO (MGI:3620422|PMID:12163459) MGI PMID:12163459 MGI:3620422 NCBI chrNW_004936521:4,560,078...5,023,780 JBrowse link
dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:192455 RGD:5133256 NCBI chrNW_004936474:28,147,459...28,180,779 JBrowse link
dCMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
deoxyribonucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rrm1 ribonucleotide reductase catalytic subunit M1 involved_in ISO (MGI:3846285|PMID:19176520) UniProt PMID:19176520 MGI:3846285 NCBI chrNW_004936498:815,401...848,749 JBrowse link
G Rrm2 ribonucleotide reductase regulatory subunit M2 involved_in ISO (MGI:3846285|PMID:19176520) UniProt PMID:19176520 MGI:3846285 NCBI chrNW_004936532:6,348,041...6,390,144 JBrowse link
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B acts_upstream_of_or_within ISO (MGI:2152627|PMID:11517226) MGI PMID:11517226 MGI:2152627 NCBI chrNW_004936470:41,354,387...41,401,308 JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 involved_in ISO (PMID:31201273) RGD
UniProt
PMID:4307347 PMID:31201273 RGD:5147877 NCBI chrNW_004936864:76,707...86,479 JBrowse link
dGDP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
diadenosine tetraphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gars1 glycyl-tRNA synthetase 1 involved_in ISO (PMID:19710017) UniProt PMID:19710017 NCBI chrNW_004936478:6,848,448...6,889,103 JBrowse link
G Kars1 lysyl-tRNA synthetase 1 involved_in ISO PMID:19524539
(PMID:23159739)
(PMID:19524539)
RGD
CAFA
UniProt
PMID:3988754 PMID:6626505 PMID:19524539 PMID:23159739 RGD:12793003 RGD:2303395 RGD:2303396 NCBI chrNW_004936475:24,294,699...24,312,051 JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in ISO PMID:19524539 CAFA PMID:19524539 RGD:12793003 NCBI chrNW_004936619:1,889,841...1,932,646 JBrowse link
dolichyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490) UniProt PMID:28842490 NCBI chrNW_004936474:10,914,018...10,949,138 JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490) UniProt PMID:28842490 NCBI chrNW_004936658:695,431...718,891 JBrowse link
dolichyl monophosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dolk dolichol kinase involved_in ISO (PMID:12213788), (PMID:16923818) UniProt PMID:12213788 PMID:16923818 NCBI chrNW_004936487:16,406,385...16,408,546 JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 ISO RGD PMID:192455 RGD:5133256 NCBI chrNW_004936532:3,896,654...3,908,184 JBrowse link
G Dtymk deoxythymidylate kinase acts_upstream_of_or_within ISO (MGI:77260|PMID:8845311) RGD
MGI
PMID:220041 PMID:8845311 MGI:77260 RGD:5133687 NCBI chrNW_004936745:282,199...289,273 JBrowse link
dTMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO (MGI:3849912|PMID:19513116) BHF-UCL PMID:19513116 MGI:3849912 NCBI chrNW_004936741:1,849,239...1,877,724 JBrowse link
G Tyms thymidylate synthetase involved_in ISO (PMID:11278511), (PMID:15093541), (PMID:8845352) RGD
CAFA
PMID:8845352 PMID:9894005 PMID:11278511 PMID:15093541 RGD:1545055 NCBI chrNW_004936550:33,797...42,233 JBrowse link
dTTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtymk deoxythymidylate kinase ISO RGD PMID:220041 RGD:5133687 NCBI chrNW_004936745:282,199...289,273 JBrowse link
G Tbpl1 TATA-box binding protein like 1 acts_upstream_of_or_within ISO (MGI:2159505|PMID:11861477) MGI PMID:11861477 MGI:2159505 NCBI chrNW_004936560:1,797,791...1,830,199 JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chrNW_004936474:28,147,459...28,180,779 JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 ISO RGD PMID:192455 RGD:5133256 NCBI chrNW_004936532:3,896,654...3,908,184 JBrowse link
dUMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dut deoxyuridine triphosphatase ISO RGD PMID:1315924 PMID:3032103 RGD:2300191 RGD:2301218 NCBI chrNW_004936471:10,670,604...10,681,356 JBrowse link
farnesyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdps farnesyl diphosphate synthase ISO RGD PMID:8188698 RGD:2316305 NCBI chrNW_004936580:4,799,354...4,808,406 JBrowse link
fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcdh glutaryl-CoA dehydrogenase ISO RGD PMID:6895440 RGD:1598697 NCBI chrNW_004936659:1,955,601...1,961,925 JBrowse link
GDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chrNW_004936864:76,707...86,479 JBrowse link
GDP-L-fucose salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcsk fucose kinase involved_in ISO (PMID:30503518) UniProt PMID:30503518 NCBI chrNW_004936475:23,116,638...23,136,635 JBrowse link
glyceraldehyde-3-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tkt transketolase involved_in ISO (PMID:9611778) UniProt PMID:9611778 NCBI chrNW_004936473:3,950,846...3,978,778 JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in ISO (PMID:18562316) UniProt PMID:18562316 NCBI chrNW_004936709:948,151...951,430 JBrowse link
glycerol-3-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gk glycerol kinase involved_in ISO (PMID:8651297) BHF-UCL PMID:8651297 NCBI chrNW_004936553:6,707,148...6,787,245 JBrowse link
glycerophospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO (MGI:3581335|PMID:15870270) MGI PMID:15870270 MGI:3581335 NCBI chrNW_004936722:1,331,568...1,341,854 JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:17482562) UniProt PMID:17482562 NCBI chrNW_004936501:11,955,334...11,967,338 JBrowse link
G Far1 fatty acyl-CoA reductase 1 involved_in ISO (PMID:20071337) UniProt PMID:20071337 NCBI chrNW_004936528:4,898,920...4,956,417 JBrowse link
GMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gmps guanine monophosphate synthase acts_upstream_of_or_within ISO (PMID:8089153) RGD
MGI
PMID:3436958 PMID:8089153 RGD:1599004 NCBI chrNW_004936519:3,094,763...3,143,322 JBrowse link
GMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (MGI:1331314|PMID:10037486) MGI PMID:10037486 MGI:1331314 NCBI chrNW_004936691:650,753...694,362 JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic acts_upstream_of_or_within
involved_in
ISO (MGI:1329093|PMID:9535917)
(PMID:9535917), (PMID:9724629)
(PMID:10835346), (PMID:9535917)
MGI
HGNC-UCL
PMID:9535917 PMID:9724629 PMID:10835346 MGI:1329093 NCBI chrNW_004936514:3,832,284...3,850,064 JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory involved_in ISO (PMID:10835346), (PMID:16162815) UniProt PMID:10835346 PMID:16162815 NCBI chrNW_004936487:15,565,151...15,567,856 JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in ISO (PMID:10835346) UniProt PMID:10835346 NCBI chrNW_004936580:4,664,653...4,665,199 JBrowse link
G LOC101977444 phosphatidylinositol glycan anchor biosynthesis class P involved_in
acts_upstream_of_or_within
ISO (PMID:16162815)
(MGI:3804747|PMID:10944123)
(PMID:28334793)
UniProt
MGI
PMID:10944123 PMID:16162815 PMID:28334793 MGI:3804747 NCBI chrNW_004936500:5,724,178...5,732,081 JBrowse link
G Mppe1 metallophosphoesterase 1 involved_in ISO (PMID:29374258) UniProt PMID:29374258 NCBI chrNW_004936626:349,324...371,073 JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 ISO RGD PMID:14734546 RGD:1303970 NCBI chrNW_004936506:2,224,598...2,297,022 JBrowse link
G Pgap2 post-GPI attachment to proteins 2 involved_in ISO (PMID:29374258)
PMID:16407401
UniProt PMID:16407401 PMID:29374258 RGD:8553507 NCBI chrNW_004936498:1,088,345...1,112,108 JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 involved_in ISO (PMID:29374258) UniProt PMID:29374258 NCBI chrNW_004936490:14,862,204...14,877,217 JBrowse link
G Pgap4 post-GPI attachment to proteins GalNAc transferase 4 involved_in ISO (PMID:29374258) UniProt PMID:29374258 NCBI chrNW_004936524:9,627,945...9,640,026 JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis class A acts_upstream_of_or_within ISO (MGI:80283|PMID:8611683) MGI PMID:8611683 MGI:80283 NCBI chrNW_004936470:4,730,955...4,746,958 JBrowse link
G Pigb phosphatidylinositol glycan anchor biosynthesis class B involved_in ISO (PMID:8861954) UniProt PMID:8861954 NCBI chrNW_004936471:16,828,910...16,857,140 JBrowse link
G Pigc phosphatidylinositol glycan anchor biosynthesis class C involved_in ISO (PMID:16162815)
(PMID:27694521)
UniProt PMID:16162815 PMID:27694521 NCBI chrNW_004936481:14,962,572...14,964,929 JBrowse link
G Pigf phosphatidylinositol glycan anchor biosynthesis class F involved_in ISO (MGI:1860649|PMID:10781593) UniProt PMID:10781593 MGI:1860649 NCBI chrNW_004936508:5,659,059...5,695,441 JBrowse link
G Pigg phosphatidylinositol glycan anchor biosynthesis class G acts_upstream_of_or_within ISO (PMID:15632136) MGI PMID:15632136 NCBI chrNW_004936477:22,524,227...22,563,536 JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis class H involved_in ISO (PMID:16162815) UniProt PMID:16162815 NCBI chrNW_004936495:10,971,448...10,979,622 JBrowse link
G Pigl phosphatidylinositol glycan anchor biosynthesis class L ISO RGD PMID:9188481 RGD:729509 NCBI chrNW_004936821:290,240...381,126 JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis class M ISO RGD PMID:11226175 RGD:70624 NCBI chrNW_004936740:595,932...597,964 JBrowse link
G Pigo phosphatidylinositol glycan anchor biosynthesis class O involved_in ISO (MGI:1860649|PMID:10781593) UniProt PMID:10781593 MGI:1860649 NCBI chrNW_004936524:3,116,627...3,126,681 JBrowse link
G Pigq phosphatidylinositol glycan anchor biosynthesis class Q involved_in
acts_upstream_of_or_within
ISO (PMID:16162815)
(MGI:1307040|PMID:9729469)
(MGI:1339481|PMID:10373468)
UniProt
MGI
PMID:9729469 PMID:10373468 PMID:16162815 MGI:1307040 MGI:1339481 NCBI chrNW_004936501:415,232...429,902 JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis class U involved_in ISO (PMID:15034568) HGNC-UCL PMID:15034568 NCBI chrNW_004936561:6,013,145...6,104,548 JBrowse link
G Pigv phosphatidylinositol glycan anchor biosynthesis class V involved_in ISO (PMID:15623507)
(PMID:15623507), (PMID:15720390)
UniProt PMID:15623507 PMID:15720390 NCBI chrNW_004936474:11,204,595...11,215,677 JBrowse link
G Pigy phosphatidylinositol glycan anchor biosynthesis class Y acts_upstream_of_or_within ISO (PMID:16162815) MGI PMID:16162815 NCBI chrNW_004936685:984,606...985,106 JBrowse link
G Pigz phosphatidylinositol glycan anchor biosynthesis class Z involved_in ISO (PMID:15208306) UniProt PMID:15208306 NCBI chrNW_004936833:902,002...918,321 JBrowse link
G Pyurf PIGY upstream open reading frame involved_in ISO (PMID:16162815) HGNC-UCL PMID:16162815 NCBI chrNW_004936685:985,007...987,646 JBrowse link
GTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in ISO (PMID:7903306) UniProt PMID:7903306 NCBI chrNW_004936529:748,777...753,582 JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 ISO RGD PMID:1316151 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182 JBrowse link
IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 acts_upstream_of_or_within ISO (MGI:5506958|PMID:23911318)
(PMID:23911318)
MGI PMID:23911318 MGI:5506958 NCBI chrNW_004936704:1,092,180...1,111,722 JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 acts_upstream_of_or_within ISO (MGI:87193|PMID:9133604)
(MGI:5506958|PMID:23911318), (MGI:5512796|PMID:23542464), (MGI:5529149|PMID:23078545)
MGI PMID:9133604 PMID:23078545 PMID:23542464 PMID:23911318 MGI:5506958 MGI:5512796 MGI:5529149 MGI:87193 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ip6k3 inositol hexakisphosphate kinase 3 acts_upstream_of_or_within ISO (PMID:11502751) MGI PMID:11502751 NCBI chrNW_004936476:25,208,332...25,231,236 JBrowse link
G Ipmk inositol polyphosphate multikinase acts_upstream_of_or_within ISO (MGI:3583505|PMID:15939867) MGI PMID:15939867 MGI:3583505 NCBI chrNW_004936614:4,724,935...4,772,373 JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:16973916 RGD:2299886 NCBI chrNW_004936561:598,372...631,575 JBrowse link
G Plcg2 phospholipase C gamma 2 acts_upstream_of_or_within ISO (MGI:85738|PMID:9013981) MGI PMID:9013981 MGI:85738 NCBI chrNW_004936475:29,248,533...29,377,335 JBrowse link
G Ptafr platelet activating factor receptor acts_upstream_of_or_within ISO (MGI:85738|PMID:9013981) MGI PMID:9013981 MGI:85738 NCBI chrNW_004936474:12,333,905...12,337,140 JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:12641450) UniProt PMID:12641450 NCBI chrNW_004936522:8,004,503...8,110,995 JBrowse link
isopentenyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvd mevalonate diphosphate decarboxylase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004936641:1,030,465...1,035,967 JBrowse link
G Mvk mevalonate kinase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004936769:1,274,595...1,295,186 JBrowse link
G Pmvk phosphomevalonate kinase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004936580:4,473,554...4,482,396 JBrowse link
long-chain fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl1 acyl-CoA synthetase long chain family member 1 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936554:4,425,518...4,484,853 JBrowse link
G Acsl4 acyl-CoA synthetase long chain family member 4 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936499:5,456,985...5,540,115 JBrowse link
G Acsl5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936486:2,952,379...2,992,148 JBrowse link
G Acsl6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936647:3,153,586...3,208,935 JBrowse link
malonyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO (MGI:3804564|PMID:18487439) UniProt PMID:18487439 MGI:3804564 NCBI chrNW_004936769:950,970...1,053,671 JBrowse link
mitochondrial acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpc1 mitochondrial pyruvate carrier 1 acts_upstream_of_or_within ISO (MGI:5428352|PMID:22628558) MGI PMID:22628558 MGI:5428352 NCBI chrNW_004936489:16,179,321...16,181,991 JBrowse link
G Mpc2 mitochondrial pyruvate carrier 2 acts_upstream_of_or_within ISO (MGI:5428352|PMID:22628558)
(MGI:5576400|PMID:24910426)
MGI PMID:22628558 PMID:24910426 MGI:5428352 MGI:5576400 NCBI chrNW_004936481:18,253,929...18,259,738 JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 acts_upstream_of_or_within ISO (MGI:3817854|PMID:18586888) MGI PMID:18586888 MGI:3817854 NCBI chrNW_004936844:889,720...906,631 JBrowse link
mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936517:743,036...752,836 JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936484:7,016,049...7,031,060 JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936588:612,255...614,894 JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936530:1,509,605...1,513,033 JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936477:22,416,505...22,417,543 JBrowse link
G Atp5mf ATP synthase membrane subunit f involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936750:1,716,752...1,725,700 JBrowse link
G Atp5mg ATP synthase membrane subunit g involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936542:3,453,287...3,461,125 JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936690:120,572...135,509 JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936594:354,416...359,415 JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936640:1,916,711...1,924,823 JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP involved_in ISO (PMID:15850986) UniProt PMID:15850986 NCBI chrNW_004936500:8,444,681...8,454,694 JBrowse link
G Stoml2 stomatin like 2 involved_in ISO (PMID:21746876)
(MGI:3849358|PMID:19360003), (MGI:5438519|PMID:23028053)
UniProt PMID:19360003 PMID:21746876 PMID:23028053 MGI:3849358 MGI:5438519 NCBI chrNW_004936524:3,129,149...3,132,405 JBrowse link
Mo-molybdopterin cofactor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gphn gephyrin acts_upstream_of_or_within ISO (MGI:2182545|PMID:9812897) MGI PMID:9812897 MGI:2182545 NCBI chrNW_004936495:9,970,683...10,565,467 JBrowse link
G Mocs1 molybdenum cofactor synthesis 1 involved_in ISO (PMID:16021469), (PMID:9731530), (PMID:9921896)
(PMID:15180982)
UniProt PMID:9731530 PMID:9921896 PMID:15180982 PMID:16021469 NCBI chrNW_004936476:19,743,052...19,771,132 JBrowse link
G Mocs2 molybdenum cofactor synthesis 2 involved_in ISO (PMID:12732628), (PMID:15073332)
(PMID:10053004)
UniProt PMID:10053004 PMID:12732628 PMID:15073332 NCBI chrNW_004936480:14,302,824...14,313,265 JBrowse link
G Mocs3 molybdenum cofactor synthesis 3 involved_in ISO (PMID:15073332) UniProt PMID:15073332 NCBI chrNW_004936514:3,830,189...3,832,194 JBrowse link
molybdopterin cofactor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gphn gephyrin involved_in ISO (PMID:26613940)
(PMID:9990024)
UniProt
CAFA
PMID:9990024 PMID:26613940 NCBI chrNW_004936495:9,970,683...10,565,467 JBrowse link
G Mocs1 molybdenum cofactor synthesis 1 acts_upstream_of_or_within ISO (MGI:2447229|PMID:12471057), (MGI:3576970|PMID:15862276), (MGI:3757917|PMID:17236133) MGI PMID:12471057 PMID:15862276 PMID:17236133 MGI:2447229 MGI:3576970 MGI:3757917 NCBI chrNW_004936476:19,743,052...19,771,132 JBrowse link
NAD biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in ISO (PMID:28792876) UniProt PMID:28792876 NCBI chrNW_004936508:8,971,516...8,987,235 JBrowse link
G Kynu kynureninase involved_in ISO (PMID:28792876) UniProt PMID:28792876 NCBI chrNW_004936469:33,632,885...33,805,158 JBrowse link
G Nampt nicotinamide phosphoribosyltransferase acts_upstream_of_or_within ISO (MGI:3522067|PMID:15381699) MGI PMID:15381699 MGI:3522067 NCBI chrNW_004936479:17,682,070...17,716,713 JBrowse link
G Naprt nicotinate phosphoribosyltransferase ISO RGD PMID:8694849 RGD:2289495 NCBI chrNW_004936470:8,554,739...8,557,889 JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 acts_upstream_of_or_within
involved_in
ISO (MGI:3522067|PMID:15381699), (MGI:3654729|PMID:16914673)
(MGI:6206974|PMID:27735788)
MGI
UniProt
PMID:15381699 PMID:16914673 PMID:27735788 MGI:3522067 MGI:3654729 MGI:6206974 NCBI chrNW_004936623:3,862,234...3,891,849 JBrowse link
G Nmnat2 nicotinamide nucleotide adenylyltransferase 2 ISO RGD PMID:22449973 RGD:13782043 NCBI chrNW_004936481:6,443,286...6,585,784 JBrowse link
G Nmnat3 nicotinamide nucleotide adenylyltransferase 3 acts_upstream_of_or_within ISO (MGI:3654729|PMID:16914673) MGI PMID:16914673 MGI:3654729 NCBI chrNW_004936540:1,653,243...1,766,244 JBrowse link
G Qprt quinolinate phosphoribosyltransferase ISO RGD PMID:8694849 RGD:2289495 NCBI chrNW_004936501:12,743,634...12,763,068 JBrowse link
NADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G6pd glucose-6-phosphate dehydrogenase acts_upstream_of_or_within ISO (MGI:1097071|PMID:9330624), (MGI:1202104|PMID:9539108), (MGI:1261671|PMID:9627357), (MGI:54902|PMID:7439685), (MGI:87492|PMID:9169132)
(MGI:1349468|PMID:3377761), (MGI:2387959|PMID:10627286), (MGI:3607389|PMID:14757696), (MGI:3694178|PMID:15998684), (MGI:49164|PMID:1953691), (MGI:85983|PMID:9067418)
(MGI:3522057|PMID:15271799)
MGI PMID:1953691 PMID:3377761 PMID:7439685 PMID:9067418 PMID:9169132 PMID:9330624 PMID:9539108 PMID:9627357 PMID:10627286 PMID:14757696 PMID:15271799 PMID:15998684 MGI:1097071 MGI:1202104 MGI:1261671 MGI:1349468 MGI:2387959 MGI:3522057 MGI:3607389 MGI:3694178 MGI:49164 MGI:54902 MGI:85983 MGI:87492 NCBI chrNW_004936809:1,269,900...1,285,853 JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 ISO RGD PMID:21641335 RGD:11522736 NCBI chrNW_004936483:15,845,777...15,864,341 JBrowse link
G Nadk NAD kinase ISO RGD PMID:22550069 RGD:13703105 NCBI chrNW_004936737:1,568,304...1,579,929 JBrowse link
negative regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flcn folliculin involved_in ISO (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chrNW_004936741:881,150...901,296 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chrNW_004936526:3,102,468...3,147,601 JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (PMID:20165904) BHF-UCL PMID:20165904 NCBI chrNW_004936525:7,114,856...7,337,179 JBrowse link
negative regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpca hippocalcin ISO RGD PMID:15336960 RGD:9686438 NCBI chrNW_004936474:15,786,171...15,794,830 JBrowse link
G Rd3 RD3 regulator of GUCY2D involved_in ISO (PMID:21928830), (PMID:30559291)
(MGI:5810226|PMID:27471269)
UniProt PMID:21928830 PMID:27471269 PMID:30559291 MGI:5810226 NCBI chrNW_004936557:1,852,996...1,873,070 JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plek pleckstrin involved_in ISO (PMID:7559487), (PMID:7782310) BHF-UCL PMID:7559487 PMID:7782310 NCBI chrNW_004936491:12,762,421...12,818,249 JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:7535379 RGD:7777104 NCBI chrNW_004936787:330,390...1,491,994 JBrowse link
negative regulation of phosphatidate phosphatase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpin1 lipin 1 ISO RGD PMID:21715287 RGD:38599010 NCBI chrNW_004936532:7,596,279...7,654,139 JBrowse link
negative regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat1 lysophosphatidylcholine acyltransferase 1 acts_upstream_of_or_within ISO (MGI:4460850|PMID:20018880) MGI PMID:20018880 MGI:4460850 NCBI chrNW_004936815:281,664...345,915 JBrowse link
negative regulation of phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor subunit A involved_in ISO (PMID:2538439) BHF-UCL PMID:2538439 NCBI chrNW_004936754:808,894...828,554 JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISO (PMID:2538439) BHF-UCL PMID:2538439 NCBI chrNW_004936492:2,353,840...2,368,573 JBrowse link
negative regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISO (PMID:24201375) ARUK-UCL PMID:24201375 RGD:14697729 NCBI chrNW_004936669:922,978...941,996 JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004936596:3,426,807...3,451,259 JBrowse link
nucleoside diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd8 ectonucleoside triphosphate diphosphohydrolase 8 acts_upstream_of_or_within ISO (MGI:3043620|PMID:15122917) MGI PMID:15122917 MGI:3043620 NCBI chrNW_004936669:629,400...632,898 JBrowse link
nucleoside monophosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd8 ectonucleoside triphosphate diphosphohydrolase 8 acts_upstream_of_or_within ISO (MGI:3043620|PMID:15122917) MGI PMID:15122917 MGI:3043620 NCBI chrNW_004936669:629,400...632,898 JBrowse link
nucleoside triphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936487:15,507,663...15,517,401 JBrowse link
G Ak4 adenylate kinase 4 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Ak5 adenylate kinase 5 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936571:4,182,450...4,418,384 JBrowse link
G Ak7 adenylate kinase 7 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936604:680,237...742,580 JBrowse link
G Ak8 adenylate kinase 8 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936487:19,212,155...19,321,601 JBrowse link
G Cmpk1 cytidine/uridine monophosphate kinase 1 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936474:28,147,459...28,180,779 JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936532:3,896,654...3,908,184 JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 involved_in ISO (PMID:1851158), (PMID:25679041) UniProt PMID:1851158 PMID:25679041 NCBI chrNW_004936490:10,634,788...10,640,182 JBrowse link
nucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtymk deoxythymidylate kinase acts_upstream_of_or_within ISO (MGI:77260|PMID:8845311) MGI PMID:8845311 MGI:77260 NCBI chrNW_004936745:282,199...289,273 JBrowse link
G LOC101970144 purine nucleoside phosphorylase involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chrNW_004936877:686,539...692,832 JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:9748490 RGD:1599724 NCBI chrNW_004936499:7,114,838...7,136,468 JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:9748490 RGD:1599724 NCBI chrNW_004936470:2,547,038...2,576,951 JBrowse link
phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase involved_in ISO (PMID:18606822) UniProt PMID:18606822 NCBI chrNW_004936695:1,644,758...1,672,024 JBrowse link
G Agpat1 1-acylglycerol-3-phosphate O-acyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:9212163)
(MGI:1097350|PMID:9299423)
BHF-UCL
MGI
PMID:9212163 PMID:9299423 MGI:1097350 NCBI chrNW_004936727:1,425,784...1,434,921 JBrowse link
G Agpat2 1-acylglycerol-3-phosphate O-acyltransferase 2 involved_in ISO (PMID:9212163) BHF-UCL PMID:9212163 NCBI chrNW_004936669:1,185,204...1,198,972 JBrowse link
G Dgka diacylglycerol kinase alpha involved_in ISO (PMID:23949095)
(PMID:15544348), (PMID:2175712), (PMID:22627129)
UniProt PMID:2175712 PMID:15544348 PMID:22627129 PMID:23949095 NCBI chrNW_004936646:351,589...367,985 JBrowse link
G Dgkb diacylglycerol kinase beta involved_in ISO PMID:23949095 UniProt PMID:23949095 RGD:30309912 NCBI chrNW_004936546:964,387...1,615,928 JBrowse link
G Dgkd diacylglycerol kinase delta involved_in ISO (PMID:17880279), (PMID:23949095) UniProt PMID:17880279 PMID:23949095 NCBI chrNW_004936525:3,826,929...3,897,618 JBrowse link
G Dgkg diacylglycerol kinase gamma involved_in ISO (PMID:8034597)
(MGI:6431961|PMID:32033984)
UniProt PMID:8034597 PMID:32033984 MGI:6431961 NCBI chrNW_004936578:3,572,424...3,762,270 JBrowse link
G Dgkh diacylglycerol kinase eta involved_in ISO (MGI:6253974|PMID:27643686) UniProt PMID:27643686 MGI:6253974 NCBI chrNW_004936747:1,562,173...1,728,588 JBrowse link
G Dgki diacylglycerol kinase iota involved_in ISO PMID:15024004 UniProt PMID:15024004 RGD:1302915 NCBI chrNW_004936592:1,843,438...2,136,905 JBrowse link
G Dgkq diacylglycerol kinase theta involved_in ISO (PMID:22732145), (PMID:23949095), (PMID:9099683)
(PMID:23610160), (PMID:23767959)
UniProt
ParkinsonsUK-UCL
PMID:9099683 PMID:22732145 PMID:23610160 PMID:23767959 PMID:23949095 NCBI chrNW_004936477:22,225,624...22,238,825 JBrowse link
G Dgkz diacylglycerol kinase zeta involved_in ISO (PMID:15544348), (PMID:19744926)
(MGI:2672999|PMID:12883552), (MGI:6201900|PMID:27739494)
UniProt PMID:12883552 PMID:15544348 PMID:19744926 PMID:27739494 MGI:2672999 MGI:6201900 NCBI chrNW_004936562:2,690,907...2,733,455 JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in ISO PMID:22905194 UniProt PMID:22905194 RGD:30309909 NCBI chrNW_004936486:2,754,753...2,823,600 JBrowse link
G Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial involved_in ISO (MGI:6228436|PMID:22905194) UniProt PMID:22905194 MGI:6228436 NCBI chrNW_004936744:183,679...194,448 JBrowse link
G Lpin1 lipin 1 ISO RGD PMID:21715287 RGD:38599010 NCBI chrNW_004936532:7,596,279...7,654,139 JBrowse link
G Pnpla3 patatin like phospholipase domain containing 3 involved_in ISO (PMID:22560221)
(MGI:5426312|PMID:22560221)
BHF-UCL PMID:22560221 MGI:5426312 NCBI chrNW_004936718:1,620,034...1,638,315 JBrowse link
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 acts_upstream_of_or_within ISO (MGI:2449823|PMID:12456676) MGI PMID:12456676 MGI:2449823 NCBI chrNW_004936732:2,066,848...2,097,947 JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004936596:3,426,807...3,451,259 JBrowse link
phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in ISO (PMID:4335615) BHF-UCL PMID:4335615 NCBI chrNW_004936542:2,111,055...2,112,626 JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:14967812) BHF-UCL PMID:14967812 NCBI chrNW_004936903:520,420...521,726 JBrowse link
G Cept1 choline/ethanolamine phosphotransferase 1 acts_upstream_of_or_within ISO (MGI:4460850|PMID:20018880) MGI PMID:20018880 MGI:4460850 NCBI chrNW_004936704:2,513,064...2,550,133 JBrowse link
G Chka choline kinase alpha involved_in
acts_upstream_of_or_within
ISO (PMID:19915674)
(MGI:3623691|PMID:16371353)
UniProt
MGI
PMID:16371353 PMID:19915674 MGI:3623691 NCBI chrNW_004936599:2,031,953...2,068,423 JBrowse link
G Chpt1 choline phosphotransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:10893425)
(MGI:4460850|PMID:20018880)
UniProt
MGI
PMID:10893425 PMID:20018880 MGI:4460850 NCBI chrNW_004936492:12,325,332...12,358,521 JBrowse link
G Dhrs7b dehydrogenase/reductase 7B acts_upstream_of_or_within ISO (MGI:6103958|PMID:28930673) MGI PMID:28930673 MGI:6103958 NCBI chrNW_004936741:455,796...496,089 JBrowse link
G Fabp5 fatty acid binding protein 5 acts_upstream_of_or_within ISO (MGI:3045488|PMID:15164767) MGI PMID:15164767 MGI:3045488 NCBI chrNW_004936656:2,881,552...2,886,192 JBrowse link
G Fgf7 fibroblast growth factor 7 ISO surfactant disaturated phosphatidylcholine (DSPC) synthesis RGD PMID:11316745 RGD:68696 NCBI chrNW_004936471:11,636,733...11,692,782 JBrowse link
G Gpat4 glycerol-3-phosphate acyltransferase 4 involved_in ISO (PMID:18238778) UniProt PMID:18238778 NCBI chrNW_004936785:967,871...1,007,761 JBrowse link
G Lcat lecithin-cholesterol acyltransferase involved_in ISO (PMID:11966470)
(PMID:12354767)
BHF-UCL
UniProt
PMID:11966470 PMID:12354767 NCBI chrNW_004936475:18,294,013...18,297,433 JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline acts_upstream_of_or_within
involved_in
ISO (MGI:2159547|PMID:11829742)
(MGI:3575987|PMID:15798219)
(MGI:2667298|PMID:12842190)
PMID:8381041
PMID:8185307
(PMID:10480912)
RGD
MGI
UniProt
PMID:8185307 PMID:8381041 PMID:10480912 PMID:11829742 PMID:12718547 PMID:12842190 PMID:15798219 MGI:2159547 MGI:2667298 MGI:3575987 RGD:39458015 RGD:729578 RGD:729598 NCBI chrNW_004936784:884,751...938,901 JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline involved_in ISO (PMID:10480912)
(MGI:2667298|PMID:12842190)
UniProt PMID:10480912 PMID:12842190 MGI:2667298 NCBI chrNW_004936624:31,678...125,318 JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase ISO RGD PMID:8344945 RGD:729486 NCBI chrNW_004936741:1,131,792...1,207,460 JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004936596:3,426,807...3,451,259 JBrowse link
phosphatidylethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase involved_in ISO (MGI:5436199|PMID:22503541) UniProt PMID:22503541 MGI:5436199 NCBI chrNW_004936677:3,232,183...3,241,307 JBrowse link
G Chka choline kinase alpha involved_in ISO (PMID:19915674) UniProt PMID:19915674 NCBI chrNW_004936599:2,031,953...2,068,423 JBrowse link
G Chkb choline kinase beta involved_in ISO (PMID:19915674) UniProt PMID:19915674 NCBI chrNW_004936629:242,876...246,806 JBrowse link
G Etnk1 ethanolamine kinase 1 involved_in ISO (PMID:11044454) UniProt PMID:11044454 NCBI chrNW_004936548:4,340,632...4,405,880 JBrowse link
G Etnk2 ethanolamine kinase 2 acts_upstream_of_or_within ISO (MGI:3695773|PMID:16861741) MGI PMID:16861741 MGI:3695773 NCBI chrNW_004936567:610,509...627,960 JBrowse link
G Pcyt2 phosphate cytidylyltransferase 2, ethanolamine involved_in ISO (PMID:31637422)
(MGI:3709941|PMID:17325045)
UniProt PMID:17325045 PMID:31637422 MGI:3709941 NCBI chrNW_004936594:5,410,975...5,417,958 JBrowse link
G Pisd phosphatidylserine decarboxylase involved_in ISO (PMID:30488656), (PMID:30858161) UniProt PMID:30488656 PMID:30858161 NCBI chrNW_004936755:665,416...767,597 JBrowse link
G Selenoi selenoprotein I involved_in ISO (PMID:28052917), (PMID:29500230)
(PMID:17132865)
UniProt
HGNC
PMID:17132865 PMID:28052917 PMID:29500230 NCBI chrNW_004936493:6,052,094...6,099,430 JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004936596:3,426,807...3,451,259 JBrowse link
phosphatidylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in ISO (PMID:19075029) UniProt PMID:19075029 NCBI chrNW_004936486:2,754,753...2,823,600 JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004936596:3,426,807...3,451,259 JBrowse link
phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase involved_in ISO (PMID:8110188), (PMID:9407135) RGD
UniProt
PMID:7998949 PMID:8110188 PMID:8804431 PMID:9407135 RGD:1626301 RGD:724663 NCBI chrNW_004936501:12,590,373...12,592,724 JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 involved_in ISO (PMID:9407135) UniProt PMID:9407135 NCBI chrNW_004936738:160,346...227,687 JBrowse link
G Impa1 inositol monophosphatase 1 involved_in ISO (PMID:1377913) RGD
UniProt
PMID:1377913 PMID:11853098 RGD:2302239 NCBI chrNW_004936656:2,598,454...2,616,643 JBrowse link
G Inppl1 inositol polyphosphate phosphatase like 1 acts_upstream_of_or_within ISO (MGI:5008671|PMID:21624956) MGI PMID:21624956 MGI:5008671 NCBI chrNW_004936498:1,524,128...1,539,680 JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 involved_in ISO (PMID:18094042) UniProt PMID:18094042 NCBI chrNW_004936994:285,041...294,661 JBrowse link
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha involved_in ISO (PMID:11279162) UniProt PMID:11279162 NCBI chrNW_004936636:2,054,672...2,083,580 JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase type 1 alpha acts_upstream_of_or_within ISO (MGI:4844021|PMID:20622009) MGI PMID:20622009 MGI:4844021 NCBI chrNW_004936580:1,399,492...1,448,398 JBrowse link
G Pip5k1b phosphatidylinositol-4-phosphate 5-kinase type 1 beta acts_upstream_of_or_within ISO (MGI:4844021|PMID:20622009) MGI PMID:20622009 MGI:4844021 NCBI chrNW_004936503:5,189,450...5,304,494 JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma acts_upstream_of_or_within ISO (MGI:4844021|PMID:20622009) MGI PMID:20622009 MGI:4844021 NCBI chrNW_004936588:2,070,873...2,088,144 JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (PMID:11606584), (PMID:12181444) UniProt PMID:11606584 PMID:12181444 NCBI chrNW_004936475:29,248,533...29,377,335 JBrowse link
G Sh3yl1 SH3 and SYLF domain containing 1 acts_upstream_of_or_within ISO (MGI:5008671|PMID:21624956) MGI PMID:21624956 MGI:5008671 NCBI chrNW_004936532:101,571...127,331 JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004936596:3,426,807...3,451,259 JBrowse link
phosphatidylinositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efr3b EFR3 homolog B involved_in ISO (PMID:23229899) UniProt PMID:23229899 NCBI chrNW_004936493:7,067,045...7,148,929 JBrowse link
G Fam126a family with sequence similarity 126 member A involved_in ISO (PMID:26571211) UniProt PMID:26571211 NCBI chrNW_004936478:139,710...213,083 JBrowse link
G Ip6k1 inositol hexakisphosphate kinase 1 involved_in ISO (PMID:10574768) UniProt PMID:10574768 NCBI chrNW_004936529:1,338,812...1,396,981 JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in ISO (PMID:10574768) UniProt PMID:10574768 NCBI chrNW_004936529:487,277...515,614 JBrowse link
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha involved_in ISO (PMID:25168678) UniProt PMID:25168678 NCBI chrNW_004936636:2,054,672...2,083,580 JBrowse link
G Pi4ka phosphatidylinositol 4-kinase alpha involved_in ISO (MGI:5476893|PMID:23229899) UniProt PMID:23229899 MGI:5476893 NCBI chrNW_004936619:2,240,641...2,377,088 JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO RGD PMID:12882977 RGD:4144086 NCBI chrNW_004936566:3,924,013...3,951,052 JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta ISO RGD PMID:12882977 RGD:4144086 NCBI chrNW_004936540:907,118...1,041,814 JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma ISO RGD PMID:12882977 RGD:4144086 NCBI chrNW_004936479:17,084,006...17,112,264 JBrowse link
G Smg1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase involved_in ISO (PMID:11331269) UniProt PMID:11331269 NCBI chrNW_004936501:4,672,871...4,753,749 JBrowse link
G Tmem150a transmembrane protein 150A involved_in ISO (PMID:25608530) UniProt PMID:25608530 NCBI chrNW_004936712:1,670,485...1,674,019 JBrowse link
G Ttc7b tetratricopeptide repeat domain 7B involved_in ISO (PMID:23229899), (PMID:26571211) UniProt PMID:23229899 PMID:26571211 NCBI chrNW_004936488:17,673,852...17,882,229 JBrowse link
phosphatidylinositol-3-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha acts_upstream_of_or_within ISO (MGI:5565574|PMID:24098492) MGI PMID:24098492 MGI:5565574 NCBI chrNW_004936528:1,845,372...1,964,908 JBrowse link
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta acts_upstream_of_or_within ISO (MGI:5565574|PMID:24098492) MGI PMID:24098492 MGI:5565574 NCBI chrNW_004936567:314,957...377,544 JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 acts_upstream_of_or_within ISO (MGI:5565574|PMID:24098492) MGI PMID:24098492 MGI:5565574 NCBI chrNW_004936517:4,009,938...4,145,518 JBrowse link
phosphatidylserine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plscr1 phospholipid scramblase 1 involved_in ISO (MGI:5284813|PMID:12509439) UniProt PMID:12509439 MGI:5284813 NCBI chrNW_004936519:8,759,702...8,790,823 JBrowse link
G Ptdss1 phosphatidylserine synthase 1 involved_in ISO (PMID:19014349) FlyBase PMID:19014349 NCBI chrNW_004936470:46,209,700...46,275,305 JBrowse link
G Ptdss2 phosphatidylserine synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:19014349)
(MGI:2446765|PMID:12361952)
FlyBase
MGI
PMID:12361952 PMID:19014349 MGI:2446765 NCBI chrNW_004936888:306,292...349,365 JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004936596:3,426,807...3,451,259 JBrowse link
phosphocreatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ckm creatine kinase, M-type acts_upstream_of_or_within ISO (MGI:3513707|PMID:15601660) RGD
MGI
PMID:12069495 PMID:15601660 MGI:3513707 RGD:1359082 NCBI chrNW_004936706:1,792,298...1,801,063 JBrowse link
phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:14711823 RGD:2312802 NCBI chrNW_004936486:2,952,379...2,992,148 JBrowse link
G Acsl6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:15655248 RGD:2312811 NCBI chrNW_004936647:3,153,586...3,208,935 JBrowse link
G Fgf7 fibroblast growth factor 7 ISO RGD PMID:11316745 RGD:68696 NCBI chrNW_004936471:11,636,733...11,692,782 JBrowse link
G Gpat3 glycerol-3-phosphate acyltransferase 3 involved_in ISO (MGI:6467919|PMID:11003606) UniProt PMID:11003606 MGI:6467919 NCBI chrNW_004936738:1,107,725...1,166,697 JBrowse link
G Hexb hexosaminidase subunit beta acts_upstream_of_or_within ISO (MGI:3047051|PMID:15198669) MGI PMID:15198669 MGI:3047051 NCBI chrNW_004936549:1,918,482...1,943,665 JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 involved_in ISO (MGI:3690244|PMID:16704971) UniProt PMID:16704971 MGI:3690244 NCBI chrNW_004936815:281,664...345,915 JBrowse link
G Mboat1 membrane bound O-acyltransferase domain containing 1 involved_in ISO (MGI:6436389|PMID:18287005) UniProt PMID:18287005 MGI:6436389 NCBI chrNW_004936552:5,470,645...5,528,232 JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase type 1 alpha involved_in ISO (PMID:15157668) UniProt PMID:15157668 NCBI chrNW_004936580:1,399,492...1,448,398 JBrowse link
G Plaat3 phospholipase A and acyltransferase 3 involved_in ISO (MGI:5315690|PMID:18614531) UniProt PMID:18614531 MGI:5315690 NCBI chrNW_004936599:5,509,723...5,524,837 JBrowse link
G Ppard peroxisome proliferator activated receptor delta ISO RGD PMID:17148578 RGD:2324892 NCBI chrNW_004936476:23,799,285...23,886,606 JBrowse link
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 acts_upstream_of_or_within ISO (MGI:2449823|PMID:12456676) MGI PMID:12456676 MGI:2449823 NCBI chrNW_004936732:2,066,848...2,097,947 JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO (MGI:3850579|PMID:19515693) MGI PMID:19515693 MGI:3850579 NCBI chrNW_004936559:6,501,890...6,553,446 JBrowse link
platelet activating factor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chpt1 choline phosphotransferase 1 involved_in ISO (PMID:10893425) UniProt PMID:10893425 NCBI chrNW_004936492:12,325,332...12,358,521 JBrowse link
G Lpcat2 lysophosphatidylcholine acyltransferase 2 involved_in ISO (MGI:3708195|PMID:17182612) UniProt PMID:17182612 MGI:3708195 NCBI chrNW_004936475:7,830,544...7,889,437 JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in ISO (MGI:1100762|PMID:9403692) UniProt PMID:9403692 MGI:1100762 NCBI chrNW_004936481:3,559,377...3,689,797 JBrowse link
G Pla2g4c phospholipase A2 group IVC involved_in ISO (PMID:19501189) UniProt PMID:19501189 NCBI chrNW_004936664:2,201,583...2,237,796 JBrowse link
G Pla2g5 phospholipase A2 group V ISO RGD PMID:11106649 RGD:2303037 NCBI chrNW_004936474:6,131,915...6,150,810 JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Eno1 enolase 1 involved_in ISO (PMID:15459207) CAFA PMID:15459207 NCBI chrNW_004936623:3,115,357...3,130,289 JBrowse link
G LOC101972576 valosin containing protein involved_in ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chrNW_004936524:3,085,959...3,102,461 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004936471:26,589,251...26,628,302 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 ISO RGD PMID:26888427 RGD:11040458 NCBI chrNW_004936498:6,626,334...6,636,973 JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (MGI:5306739|PMID:21080215) BHF-UCL PMID:21080215 MGI:5306739 NCBI chrNW_004936525:7,114,856...7,337,179 JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of ISO (PMID:31574452) ARUK-UCL PMID:31574452 NCBI chrNW_004936629:3,672,445...3,725,645 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24096089 RGD:10413842 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:24747689) AgBase PMID:24747689 NCBI chrNW_004936521:10,296,097...10,316,673 JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004936509:1,994,082...2,077,731 JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO RGD PMID:23590160 RGD:8694322 NCBI chrNW_004936490:17,119,189...17,178,402 JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase ISO RGD PMID:20348225 RGD:13432160 NCBI chrNW_004936809:1,160,265...1,168,956 JBrowse link
G Tmsb4x thymosin beta 4 X-linked involved_in ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004936470:2,668,525...2,670,611 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5906931|PMID:28802038) ARUK-UCL PMID:28802038 MGI:5906931 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
positive regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2b adenosine A2b receptor acts_upstream_of_or_within ISO (MGI:3794903|PMID:18340377) MGI PMID:18340377 MGI:3794903 NCBI chrNW_004936821:583,463...608,189 JBrowse link
G Guca1a guanylate cyclase activator 1A ISO RGD PMID:12545196 RGD:1599357 NCBI chrNW_004936476:17,690,484...17,701,288 JBrowse link
G Nos3 nitric oxide synthase 3 involved_in ISO (PMID:17502619) BHF-UCL PMID:17502619 NCBI chrNW_004936527:6,427,147...6,445,770 JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I ISO RGD PMID:8943280 RGD:2315982 NCBI chrNW_004936478:7,278,081...7,322,970 JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in ISO (PMID:9322919) ARUK-UCL PMID:9322919 NCBI chrNW_004936557:6,415,544...6,423,863 JBrowse link
G Cd244 CD244 molecule involved_in ISO (PMID:8376943) UniProt PMID:8376943 NCBI chrNW_004936903:146,108...162,410 JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:11861328 RGD:9743897 NCBI chrNW_004936514:10,240,990...10,272,859 JBrowse link
G Ptafr platelet activating factor receptor ISO RGD PMID:8798508 RGD:9999203 NCBI chrNW_004936474:12,333,905...12,337,140 JBrowse link
G Pth parathyroid hormone involved_in ISO (PMID:11604398) CAFA PMID:11604398 NCBI chrNW_004936528:5,081,569...5,084,030 JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in ISO PMID:19608645 BHF-UCL PMID:19608645 RGD:8553376 NCBI chrNW_004936596:674,088...693,191 JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:15641770) UniProt PMID:15641770 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO (PMID:15705806) UniProt PMID:15705806 NCBI chrNW_004936754:1,288,891...1,293,555 JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in ISO (MGI:5318037|PMID:10493819) BHF-UCL PMID:10493819 MGI:5318037 NCBI chrNW_004936508:3,928,467...3,983,481 JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chrNW_004936492:4,384,215...4,466,229 JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in ISO PMID:11390975 BHF-UCL PMID:11390975 RGD:8553380 NCBI chrNW_004936519:865,756...872,466 JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 involved_in ISO (PMID:8670200) ARUK-UCL PMID:8670200 NCBI chrNW_004936498:2,468,020...2,501,344 JBrowse link
G Plcd1 phospholipase C delta 1 ISO RGD PMID:16709602 RGD:2300424 NCBI chrNW_004936473:27,364,404...27,387,337 JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (MGI:2135699|PMID:11371619) MGI PMID:11371619 MGI:2135699 NCBI chrNW_004936610:2,262,715...2,279,098 JBrowse link
positive regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (PMID:23767959) ParkinsonsUK-UCL PMID:23767959 NCBI chrNW_004936492:13,315,265...13,365,186 JBrowse link
positive regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl3 acyl-CoA synthetase long chain family member 3 involved_in ISO (PMID:18003621) UniProt PMID:18003621 NCBI chrNW_004936569:4,774,602...4,842,906 JBrowse link
G Capn2 calpain 2 ISO RGD PMID:9481489 RGD:13792658 NCBI chrNW_004936526:879,765...932,682 JBrowse link
G Rab38 RAB38, member RAS oncogene family ISO RGD PMID:28438206 RGD:13524861 NCBI chrNW_004936736:1,304,290...1,360,412 JBrowse link
positive regulation of phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htr2a 5-hydroxytryptamine receptor 2A involved_in ISO (PMID:19057895) UniProt PMID:19057895 NCBI chrNW_004936565:335,238...394,683 JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B involved_in ISO (PMID:19057895) UniProt PMID:19057895 NCBI chrNW_004936525:5,711,894...5,729,074 JBrowse link
G Htr2c 5-hydroxytryptamine receptor 2C involved_in ISO (PMID:19057895) UniProt PMID:19057895 NCBI chrNW_004936499:1,002,083...1,109,446 JBrowse link
positive regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrf5 adhesion G protein-coupled receptor F5 acts_upstream_of_or_within ISO (MGI:5641462|PMID:23590306) MGI PMID:23590306 MGI:5641462 NCBI chrNW_004936476:13,414,087...13,503,926 JBrowse link
G Chp1 calcineurin like EF-hand protein 1 involved_in ISO (PMID:30846317) FlyBase PMID:30846317 NCBI chrNW_004936471:4,611,980...4,660,320 JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:19191103 RGD:126790485 NCBI chrNW_004936586:4,065,767...5,100,690 JBrowse link
G Pc pyruvate carboxylase involved_in ISO PMID:23357280 CACAO PMID:23357280 RGD:10047307 NCBI chrNW_004936599:2,677,770...2,793,033 JBrowse link
propionyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
purine nucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss2 adenylosuccinate synthase 2 acts_upstream_of_or_within ISO (MGI:2451213|PMID:12482871) MGI PMID:12482871 MGI:2451213 NCBI chrNW_004936526:6,342,233...6,380,736 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (PMID:9824441) UniProt PMID:9824441 NCBI chrNW_004936691:650,753...694,362 JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 acts_upstream_of_or_within ISO (MGI:2675193|PMID:12944494) MGI PMID:12944494 MGI:2675193 NCBI chrNW_004936479:15,523,342...15,540,229 JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 acts_upstream_of_or_within ISO (MGI:2675193|PMID:12944494) RGD
MGI
PMID:2897864 PMID:12944494 MGI:2675193 RGD:5147398 NCBI chrNW_004936529:748,777...753,582 JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (MGI:5503248|PMID:23704330) BHF-UCL PMID:23704330 MGI:5503248 NCBI chrNW_004936495:8,100,977...8,170,244 JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 involved_in ISO (PMID:12847698) UniProt PMID:12847698 NCBI chrNW_004936499:7,114,838...7,136,468 JBrowse link
purine nucleotide salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (PMID:9361033) UniProt PMID:9361033 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
purine ribonucleoside monophosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss1 adenylosuccinate synthase 1 ISO RGD PMID:3759987 RGD:5135303 NCBI chrNW_004936621:655,004...667,608 JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:8463258 RGD:633710 NCBI chrNW_004936482:18,606,124...18,648,989 JBrowse link
pyridoxal phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdxk pyridoxal kinase ISO RGD PMID:2988502 RGD:2303018 NCBI chrNW_004936500:510,977...539,166 JBrowse link
G Pnpo pyridoxamine 5'-phosphate oxidase involved_in ISO (PMID:12824491) CAFA PMID:12824491 NCBI chrNW_004936490:13,374,925...13,382,037 JBrowse link
regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in ISO (MGI:5487511|PMID:22195962) UniProt PMID:22195962 MGI:5487511 NCBI chrNW_004936509:2,597,593...2,633,780 JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISO (MGI:5428826|PMID:22360721) UniProt PMID:22360721 MGI:5428826 NCBI chrNW_004936490:11,534,412...11,549,128 JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in ISO (PMID:22865452) UniProt PMID:22865452 NCBI chrNW_004936624:141,745...213,495 JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISO (PMID:21852536)
(MGI:3692363|PMID:16606348)
UniProt PMID:16606348 PMID:21852536 MGI:3692363 NCBI chrNW_004936585:4,701,012...4,713,421 JBrowse link
regulation of acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snca synuclein alpha acts_upstream_of_or_within ISO (MGI:3628986|PMID:16636270)
(MGI:3629421|PMID:16734431)
MGI PMID:16636270 PMID:16734431 MGI:3628986 MGI:3629421 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak4 adenylate kinase 4 involved_in ISO (PMID:24767988) UniProt PMID:24767988 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO (MGI:5641585|PMID:25637806) UniProt PMID:25637806 MGI:5641585 NCBI chrNW_004936664:2,668,708...2,676,608 JBrowse link
regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guca1anb GUCA1A neighbor acts_upstream_of_or_within ISO (MGI:3052899|PMID:15336959) MGI PMID:15336959 MGI:3052899
G Guca1b guanylate cyclase activator 1B acts_upstream_of_or_within ISO (MGI:3052899|PMID:15336959) MGI PMID:15336959 MGI:3052899 NCBI chrNW_004936476:17,679,505...17,688,970 JBrowse link
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (MGI:3583523|PMID:12960403) UniProt PMID:12960403 MGI:3583523 NCBI chrNW_004936675:216,970...325,670 JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase involved_in ISO (PMID:30530489)
(MGI:6277238|PMID:30530489)
UniProt PMID:30530489 MGI:6277238 NCBI chrNW_004936643:2,339,073...2,354,780 JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in ISO (MGI:6245118|PMID:30318146) UniProt PMID:30318146 MGI:6245118 NCBI chrNW_004936543:2,895,771...2,897,761 JBrowse link
regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO (MGI:5904930|PMID:27806294) MGI PMID:27806294 MGI:5904930 NCBI chrNW_004936581:567,426...576,859 JBrowse link
regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp3 fatty acid binding protein 3 acts_upstream_of_or_within ISO (MGI:3045488|PMID:15164767) MGI PMID:15164767 MGI:3045488 NCBI chrNW_004936474:14,576,582...14,584,362 JBrowse link
regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 acts_upstream_of_or_within ISO (MGI:5605608|PMID:25218477) MGI PMID:25218477 MGI:5605608 NCBI chrNW_004936950:334,894...349,221 JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (MGI:6467919|PMID:11003606) UniProt PMID:11003606 MGI:6467919 NCBI chrNW_004936522:8,004,503...8,110,995 JBrowse link
ribonucleoside monophosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase ISO AICAR RGD PMID:3759987 RGD:5135303 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:4027981 RGD:5135261 NCBI chrNW_004936500:8,750,928...8,782,303 JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase ISO RGD PMID:6722784 RGD:5135276 NCBI chrNW_004936595:1,483,688...1,499,716 JBrowse link
ribose phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G6pd glucose-6-phosphate dehydrogenase involved_in ISO (PMID:2420826) BHF-UCL PMID:2420826 NCBI chrNW_004936809:1,269,900...1,285,853 JBrowse link
G Tkt transketolase ISO RGD PMID:16116031 RGD:1580394 NCBI chrNW_004936473:3,950,846...3,978,778 JBrowse link
sphinganine-1-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sphk2 sphingosine kinase 2 involved_in ISO (PMID:10751414), (PMID:19729656)
(MGI:1860308|PMID:10751414)
UniProt PMID:10751414 PMID:19729656 MGI:1860308 NCBI chrNW_004936664:2,668,708...2,676,608 JBrowse link
sphingomyelin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101967158 serine palmitoyltransferase 2 acts_upstream_of_or_within ISO (MGI:3814228|PMID:16216550) MGI PMID:16216550 MGI:3814228 NCBI chrNW_004936488:6,313,189...6,404,425 JBrowse link
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 acts_upstream_of ISO (MGI:6393026|PMID:31880535) MGI PMID:31880535 MGI:6393026 NCBI chrNW_004936506:8,197,116...8,208,712 JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of ISO (MGI:6393026|PMID:31880535) MGI PMID:31880535 MGI:6393026 NCBI chrNW_004936490:15,069,435...15,076,112 JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase acts_upstream_of_or_within ISO (MGI:5707904|PMID:25667419) MGI PMID:25667419 MGI:5707904 NCBI chrNW_004936741:1,131,792...1,207,460 JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in ISO (PMID:14685263), (PMID:14976195), (PMID:17982138)
(MGI:6221394|PMID:27892528)
HGNC-UCL
UniProt
PMID:14685263 PMID:14976195 PMID:17982138 PMID:27892528 MGI:6221394 NCBI chrNW_004936735:1,702,754...1,984,141 JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:14685263), (PMID:17982138)
(MGI:5707904|PMID:25667419)
(MGI:6221394|PMID:27892528)
UniProt
MGI
PMID:14685263 PMID:17982138 PMID:25667419 PMID:27892528 MGI:5707904 MGI:6221394 NCBI chrNW_004936818:687,695...726,123 JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 involved_in
acts_upstream_of_or_within
ISO (MGI:5749304|PMID:26301690)
(MGI:3814228|PMID:16216550)
UniProt
MGI
PMID:16216550 PMID:26301690 MGI:3814228 MGI:5749304 NCBI chrNW_004936796:886,946...948,254 JBrowse link
UDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chrNW_004936474:28,147,459...28,180,779 JBrowse link
UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Umps uridine monophosphate synthetase involved_in ISO (PMID:11730338), (PMID:6893554) RGD
UniProt
PMID:6134725 PMID:6893554 PMID:11730338 RGD:5132277 NCBI chrNW_004936725:553,278...564,846 JBrowse link
G Uprt uracil phosphoribosyltransferase homolog ISO RGD PMID:1476792 RGD:5132591 NCBI chrNW_004936683:1,432,004...1,454,004 JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:10659854 RGD:2303528 NCBI chrNW_004936493:5,308,268...5,332,934 JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 ISO RGD PMID:1316151 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12131
    metabolic process 7606
      organic substance metabolic process 7332
        organophosphate metabolic process 641
          organophosphate biosynthetic process 334
            1-deoxy-D-xylulose 5-phosphate biosynthetic process 0
            7,8-dihydroneopterin 3'-triphosphate biosynthetic process 0
            D-glycero-D-manno-heptose 7-phosphate biosynthetic process 0
            Mo-molybdopterin cofactor biosynthetic process + 4
            O3-(N-acetylglucosamine-1-phosphoryl)-L-serine biosynthetic process 0
            W-molybdopterin cofactor biosynthetic process 0
            carbamoyl phosphate biosynthetic process 1
            coenzyme gamma-F420-2 biosynthetic process 0
            cyclic 2,3-bisphospho-D-glycerate biosynthetic process 0
            deoxyribose phosphate biosynthetic process + 9
            glyceraldehyde-3-phosphate biosynthetic process 2
            glycerol-3-phosphate biosynthetic process 1
            inositol phosphate biosynthetic process + 23
            methanopterin-containing compound biosynthetic process + 0
            molybdopterin cofactor biosynthetic process 2
            nucleoside phosphate biosynthetic process + 158
            organic phosphonate biosynthetic process 0
            phosphagen biosynthetic process + 1
            phospholipid biosynthetic process + 148
            psilocybin biosynthetic process 0
            pyridoxal phosphate biosynthetic process + 2
            ribose phosphate biosynthetic process + 117
            thiamine diphosphate biosynthetic process + 0
            xylulose 5-phosphate biosynthetic process + 0
Path 2
Term Annotations click to browse term
  biological_process 12131
    cellular process 11322
      cellular metabolic process 6983
        phosphorus metabolic process 2081
          organophosphate metabolic process 641
            organophosphate biosynthetic process 334
              1-deoxy-D-xylulose 5-phosphate biosynthetic process 0
              7,8-dihydroneopterin 3'-triphosphate biosynthetic process 0
              D-glycero-D-manno-heptose 7-phosphate biosynthetic process 0
              Mo-molybdopterin cofactor biosynthetic process + 4
              O3-(N-acetylglucosamine-1-phosphoryl)-L-serine biosynthetic process 0
              W-molybdopterin cofactor biosynthetic process 0
              carbamoyl phosphate biosynthetic process 1
              coenzyme gamma-F420-2 biosynthetic process 0
              cyclic 2,3-bisphospho-D-glycerate biosynthetic process 0
              deoxyribose phosphate biosynthetic process + 9
              glyceraldehyde-3-phosphate biosynthetic process 2
              glycerol-3-phosphate biosynthetic process 1
              inositol phosphate biosynthetic process + 23
              methanopterin-containing compound biosynthetic process + 0
              molybdopterin cofactor biosynthetic process 2
              nucleoside phosphate biosynthetic process + 158
              organic phosphonate biosynthetic process 0
              phosphagen biosynthetic process + 1
              phospholipid biosynthetic process + 148
              psilocybin biosynthetic process 0
              pyridoxal phosphate biosynthetic process + 2
              ribose phosphate biosynthetic process + 117
              thiamine diphosphate biosynthetic process + 0
              xylulose 5-phosphate biosynthetic process + 0
paths to the root