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ONTOLOGY REPORT - ANNOTATIONS


Term:organophosphate biosynthetic process
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Accession:GO:0090407 term browser browse the term
Definition:The chemical reactions and pathways resulting in the biosynthesis of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.


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'de novo' IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:9332377 RGD:70804 NCBI chrNW_004955457:704,213...729,702
Ensembl chrNW_004955457:704,213...730,134
JBrowse link
'de novo' NAD biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nadsyn1 NAD synthetase 1 involved_in ISO (PMID:31883644) UniProt PMID:31883644 NCBI chrNW_004955422:15,067,711...15,113,942
Ensembl chrNW_004955422:15,066,708...15,114,049
JBrowse link
1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISO (PMID:26774281) UniProt PMID:26774281 NCBI chrNW_004955429:6,231,135...6,399,672
Ensembl chrNW_004955429:6,336,355...6,399,672
JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISO (PMID:26774281) UniProt PMID:26774281 NCBI chrNW_004955451:13,842,814...13,856,301
Ensembl chrNW_004955451:13,842,814...13,856,302
JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in ISO (PMID:26774281) UniProt PMID:26774281 NCBI chrNW_004955458:5,315,083...5,327,617
Ensembl chrNW_004955458:5,315,376...5,327,617
JBrowse link
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14747722), (PMID:23207770)
(MGI:2448448|PMID:12414806)
UniProt
MGI
PMID:12414806 PMID:14747722 PMID:23207770 MGI:2448448 NCBI chrNW_004955496:1,993,423...2,057,384
Ensembl chrNW_004955496:1,993,172...2,059,174
JBrowse link
5-phosphoribose 1-diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prps1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:9366267 RGD:5134981 NCBI chrNW_004955490:8,303,775...8,330,713 JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:9366267 RGD:5134981 NCBI chrNW_004955544:480,587...512,019
Ensembl chrNW_004955544:478,954...512,614
JBrowse link
G Pygl glycogen phosphorylase L ISO RGD PMID:15571236 RGD:1599376 NCBI chrNW_004955409:11,970,112...12,007,102
Ensembl chrNW_004955409:11,970,112...12,007,102
JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004955412:10,350,088...10,369,806
Ensembl chrNW_004955412:10,349,593...10,369,806
JBrowse link
G Acly ATP citrate lyase involved_in ISO (PMID:1371749) BHF-UCL PMID:1371749 NCBI chrNW_004955451:16,058,916...16,091,831
Ensembl chrNW_004955451:16,058,727...16,092,589
JBrowse link
G Acss1 acyl-CoA synthetase short chain family member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:16788062)
(MGI:2151932|PMID:11150295)
UniProt
MGI
PMID:11150295 PMID:16788062 MGI:2151932 NCBI chrNW_004955415:31,117,542...31,154,654
Ensembl chrNW_004955415:31,117,303...31,154,654
JBrowse link
G Acss2 acyl-CoA synthetase short chain family member 2 acts_upstream_of_or_within ISO (MGI:2151932|PMID:11150295) MGI PMID:11150295 MGI:2151932 NCBI chrNW_004955422:26,450,899...26,500,336
Ensembl chrNW_004955422:26,451,598...26,500,546
JBrowse link
G Dip2a disco interacting protein 2 homolog A involved_in ISO (MGI:6478983|PMID:30672040) UniProt PMID:30672040 MGI:6478983 NCBI chrNW_004955407:42,857,297...42,961,831
Ensembl chrNW_004955407:42,857,344...42,959,265
JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO (PMID:29754768) UniProt PMID:29754768 NCBI chrNW_004955537:2,080,865...2,084,199
Ensembl chrNW_004955537:2,080,865...2,085,003
JBrowse link
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlat dihydrolipoamide S-acetyltransferase ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004955412:13,718,091...13,746,220
Ensembl chrNW_004955412:13,718,067...13,744,239
JBrowse link
G Dld dihydrolipoamide dehydrogenase ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004955410:12,212,981...12,238,561
Ensembl chrNW_004955410:12,212,963...12,238,561
JBrowse link
G Pdha1 pyruvate dehydrogenase E1 alpha 1 subunit involved_in ISO (PMID:19081061) RGD
UniProt
PMID:7487891 PMID:19081061 RGD:1599112 NCBI chrNW_004955586:98,492...114,927
Ensembl chrNW_004955586:97,172...114,928
JBrowse link
G Pdha2 pyruvate dehydrogenase E1 alpha 2 subunit ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004955405:6,383,088...6,383,946 JBrowse link
G Pdhb pyruvate dehydrogenase E1 beta subunit involved_in ISO (PMID:19081061) RGD
UniProt
PMID:7487891 PMID:19081061 RGD:1599112 NCBI chrNW_004955430:1,707,615...1,713,541
Ensembl chrNW_004955430:1,707,615...1,713,541
JBrowse link
ADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chrNW_004955419:799,415...807,138
Ensembl chrNW_004955419:799,410...811,029
JBrowse link
G Ak2 adenylate kinase 2 ISO RGD PMID:5123889 RGD:5490208 NCBI chrNW_004955452:11,254,853...11,275,587 JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:5010295 PMID:5123889 RGD:5490208 RGD:5490216 NCBI chrNW_004955434:8,998,357...9,010,468
Ensembl chrNW_004955434:9,000,158...9,011,250
JBrowse link
AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (PMID:11428554) RGD
UniProt
PMID:3759987 PMID:11428554 RGD:5135303 NCBI chrNW_004955413:26,067,463...26,084,669
Ensembl chrNW_004955413:26,067,516...26,088,527
JBrowse link
G Adss1 adenylosuccinate synthase 1 involved_in ISO (PMID:15786719) UniProt PMID:15786719 NCBI chrNW_004955538:3,179,299...3,196,251
Ensembl chrNW_004955538:3,179,299...3,196,251
JBrowse link
G Adss2 adenylosuccinate synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:2004783)
(MGI:64874|PMID:8308018)
UniProt
MGI
PMID:2004783 PMID:8308018 MGI:64874 NCBI chrNW_004955406:7,684,979...7,715,179
Ensembl chrNW_004955406:7,683,596...7,715,616
JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004955490:8,303,775...8,330,713 JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004955544:480,587...512,019
Ensembl chrNW_004955544:478,954...512,614
JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 ISO RGD PMID:5484813 RGD:2301093 NCBI chrNW_004955434:8,998,357...9,010,468
Ensembl chrNW_004955434:9,000,158...9,011,250
JBrowse link
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004955402:704...128,521
Ensembl chrNW_004955402:665...124,777
JBrowse link
AMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aprt adenine phosphoribosyltransferase involved_in
acts_upstream_of_or_within
ISO (MGI:1312996|PMID:9776749)
(MGI:85816|PMID:8864750)
MGI PMID:8864750 PMID:9776749 MGI:1312996 MGI:85816 NCBI chrNW_004955541:2,687,938...2,690,906
Ensembl chrNW_004955541:2,687,938...2,690,906
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (MGI:1331314|PMID:10037486) MGI PMID:10037486 MGI:1331314 NCBI chrNW_004955473:462,940...510,006 JBrowse link
ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004955402:31,652,226...31,662,114
Ensembl chrNW_004955402:31,651,960...31,662,762
JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:17510399), (PMID:21106936) CAFA PMID:17510399 PMID:21106936 NCBI chrNW_004955458:4,188,167...4,195,575
Ensembl chrNW_004955458:4,186,461...4,195,494
JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 ISO RGD PMID:22209705 RGD:13800744 NCBI chrNW_004955451:12,426,309...12,429,460
Ensembl chrNW_004955451:12,426,309...12,429,395
JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP ISO RGD PMID:7864899 RGD:14696824 NCBI chrNW_004955407:33,288,194...33,298,817 JBrowse link
G Dguok deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chrNW_004955424:11,739,904...11,773,884
Ensembl chrNW_004955424:11,738,859...11,773,902
JBrowse link
G LOC102020557 L-lactate dehydrogenase C chain acts_upstream_of_or_within ISO (MGI:3775056|PMID:18367675) MGI PMID:18367675 MGI:3775056 NCBI chrNW_004955414:33,109,535...33,138,756
Ensembl chrNW_004955414:33,110,120...33,138,756
JBrowse link
G Pklr pyruvate kinase L/R ISO RGD PMID:4273555 PMID:5492954 RGD:2302789 RGD:2302790 NCBI chrNW_004955545:1,742,432...1,749,632
Ensembl chrNW_004955545:1,739,152...1,749,632
JBrowse link
G Pkm pyruvate kinase M1/2 ISO RGD PMID:4273555 RGD:2302790 NCBI chrNW_004955450:4,907,962...4,935,179
Ensembl chrNW_004955450:4,907,788...4,936,199
JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in ISO (PMID:12851387) UniProt PMID:12851387 NCBI chrNW_004955432:12,685,253...12,788,307
Ensembl chrNW_004955432:12,684,596...12,826,667
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:10513816) BHF-UCL PMID:10513816 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
attachment of GPI anchor to protein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pigs phosphatidylinositol glycan anchor biosynthesis class S involved_in ISO (MGI:3688056|PMID:11483512) UniProt PMID:11483512 MGI:3688056 NCBI chrNW_004955481:4,583,119...4,597,091
Ensembl chrNW_004955481:4,583,119...4,597,091
JBrowse link
G Pigt phosphatidylinositol glycan anchor biosynthesis class T involved_in ISO (MGI:3688056|PMID:11483512) UniProt PMID:11483512 MGI:3688056 NCBI chrNW_004955445:11,916,898...11,925,578
Ensembl chrNW_004955445:11,915,225...11,925,820
JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis class U involved_in ISO (PMID:12802054) UniProt PMID:12802054 NCBI chrNW_004955422:26,685,060...26,774,261
Ensembl chrNW_004955422:26,685,060...26,775,416
JBrowse link
cAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 ISO RGD PMID:14985420 RGD:2312640 NCBI chrNW_004955456:6,833,992...6,930,990
Ensembl chrNW_004955456:6,841,637...6,930,990
JBrowse link
G Adcy10 adenylate cyclase 10 involved_in ISO (PMID:12609998), (PMID:15659711) RGD
UniProt
PMID:7225326 PMID:9874775 PMID:12609998 PMID:15659711 PMID:16627466 PMID:16964251 RGD:1299450 RGD:2313171 RGD:2313173 RGD:2313177 NCBI chrNW_004955462:9,196,984...9,278,850
Ensembl chrNW_004955462:9,207,314...9,278,621
JBrowse link
G Adcy2 adenylate cyclase 2 involved_in ISO PMID:18164588
PMID:10427002
RGD
BHF-UCL
UniProt
PMID:10427002 PMID:11738086 PMID:12711600 PMID:18164588 RGD:10400857 RGD:2312641 RGD:2312674 RGD:8553431 NCBI chrNW_004955504:4,990,634...5,376,990
Ensembl chrNW_004955504:5,004,903...5,376,328
JBrowse link
G Adcy3 adenylate cyclase 3 involved_in ISO (MGI:1889935|PMID:11055432)
PMID:24363043
RGD
UniProt
PMID:11055432 PMID:12711600 PMID:24363043 MGI:1889935 RGD:10400870 RGD:2312674 NCBI chrNW_004955469:6,933,208...7,026,179
Ensembl chrNW_004955469:6,929,092...7,026,758
JBrowse link
G Adcy4 adenylate cyclase 4 involved_in ISO PMID:8900209 RGD
BHF-UCL
PMID:8900209 PMID:11738086 PMID:12711600 RGD:2312641 RGD:2312674 RGD:8554340 NCBI chrNW_004955409:35,966,529...35,982,839
Ensembl chrNW_004955409:35,966,332...35,982,218
JBrowse link
G Adcy6 adenylate cyclase 6 involved_in ISO (MGI:4457984|PMID:20466003)
(PMID:17916776), (PMID:18403039)
RGD
UniProt
PMID:10866989 PMID:10894801 PMID:11738086 PMID:12711600 PMID:15579502 PMID:15961389 PMID:17916776 PMID:18403039 PMID:18971210 PMID:20466003 MGI:4457984 RGD:1598749 RGD:2312641 RGD:2312654 RGD:2312674 RGD:2312678 RGD:2313211 RGD:2315006 NCBI chrNW_004955500:7,635,946...7,655,579
Ensembl chrNW_004955500:7,637,089...7,651,162
JBrowse link
G Adcy7 adenylate cyclase 7 involved_in ISO (PMID:11113152), (PMID:17760784) RGD
UniProt
PMID:11113152 PMID:12711600 PMID:17760784 RGD:2312674 NCBI chrNW_004955433:8,362,957...8,428,773
Ensembl chrNW_004955433:8,362,756...8,426,997
JBrowse link
G Adcy8 adenylate cyclase 8 ISO RGD PMID:16741924 PMID:19305019 PMID:19444869 RGD:2312769 RGD:2312785 RGD:7241269 NCBI chrNW_004955461:5,497,708...5,725,574
Ensembl chrNW_004955461:5,497,628...5,725,574
JBrowse link
G Adcy9 adenylate cyclase 9 acts_upstream_of_or_within
involved_in
ISO (MGI:76465|PMID:7575502), (MGI:80863|PMID:8662814)
(PMID:10987815), (PMID:9628827)
RGD
MGI
UniProt
PMID:7575502 PMID:8662814 PMID:9628827 PMID:10987815 PMID:19444869 MGI:76465 MGI:80863 RGD:2312785 NCBI chrNW_004955442:13,310,289...13,433,816
Ensembl chrNW_004955442:13,310,289...13,434,971
JBrowse link
carbamoyl phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cps1 carbamoyl-phosphate synthase 1 involved_in ISO (PMID:21120950), (PMID:7416778) UniProt PMID:7416778 PMID:21120950 NCBI chrNW_004955457:4,848,116...4,961,384
Ensembl chrNW_004955457:4,844,152...4,961,246
JBrowse link
cardiolipin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g6 phospholipase A2 group VI involved_in ISO (PMID:19164547) UniProt PMID:19164547 NCBI chrNW_004955413:24,431,592...24,482,229
Ensembl chrNW_004955413:24,429,589...24,482,537
JBrowse link
G Plscr3 phospholipid scramblase 3 involved_in ISO (PMID:16939411) UniProt PMID:16939411 NCBI chrNW_004955467:9,534,462...9,539,738
Ensembl chrNW_004955467:9,535,261...9,539,738
JBrowse link
G Ptpmt1 protein tyrosine phosphatase mitochondrial 1 involved_in ISO (MGI:5288296|PMID:21641550) UniProt PMID:21641550 MGI:5288296 NCBI chrNW_004955422:723,236...724,761 JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004955524:803,793...821,920
Ensembl chrNW_004955524:805,014...821,838
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:11118295), (PMID:16873891), (PMID:17043667), (PMID:19164547) HGNC-UCL PMID:11118295 PMID:16873891 PMID:17043667 PMID:19164547 NCBI chrNW_004955580:915,668...921,703
Ensembl chrNW_004955580:915,188...922,791
JBrowse link
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chrNW_004955464:11,179,432...11,213,147 JBrowse link
CDP-choline pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcyt1a phosphate cytidylyltransferase 1A, choline involved_in ISO (PMID:10480912)
(MGI:2667298|PMID:12842190)
PMID:8185307
PMID:19783652
PMID:8381041
UniProt PMID:8185307 PMID:8381041 PMID:10480912 PMID:12842190 PMID:19783652 MGI:2667298 RGD:39458015 RGD:729578 RGD:8553740 NCBI chrNW_004955420:12,464,857...12,513,017
Ensembl chrNW_004955420:12,464,857...12,500,574
JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline involved_in ISO (PMID:10480912)
(MGI:2667298|PMID:12842190)
UniProt PMID:10480912 PMID:12842190 MGI:2667298 NCBI chrNW_004955509:4,896,208...4,990,101
Ensembl chrNW_004955509:4,896,190...4,990,149
JBrowse link
CDP-diacylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cds1 CDP-diacylglycerol synthase 1 involved_in ISO (PMID:25375833), (PMID:9407135) UniProt PMID:9407135 PMID:25375833 NCBI chrNW_004955474:5,057,833...5,104,235
Ensembl chrNW_004955474:5,057,833...5,104,235
JBrowse link
G Cds2 CDP-diacylglycerol synthase 2 involved_in ISO (PMID:25375833) UniProt PMID:25375833 NCBI chrNW_004955415:15,762,672...15,806,454
Ensembl chrNW_004955415:15,792,239...15,806,454
JBrowse link
ceramide phosphoethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Samd8 sterile alpha motif domain containing 8 acts_upstream_of_or_within ISO (MGI:5707904|PMID:25667419) MGI PMID:25667419 MGI:5707904 NCBI chrNW_004955437:16,900,756...16,969,042
Ensembl chrNW_004955437:16,900,688...16,969,042
JBrowse link
G Sgms2 sphingomyelin synthase 2 acts_upstream_of_or_within ISO (MGI:5707904|PMID:25667419) MGI PMID:25667419 MGI:5707904 NCBI chrNW_004955496:1,909,347...1,955,004
Ensembl chrNW_004955496:1,905,517...1,947,009
JBrowse link
cGMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 involved_in
acts_upstream_of_or_within
ISO (PMID:23505436)
(MGI:3640061|PMID:16614755)
UniProt
MGI
PMID:16614755 PMID:23505436 MGI:3640061 NCBI chrNW_004955471:11,367,318...11,422,199
Ensembl chrNW_004955471:11,367,282...11,424,273
JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 involved_in ISO (PMID:23505436) UniProt PMID:23505436 NCBI chrNW_004955471:11,303,478...11,349,512
Ensembl chrNW_004955471:11,303,242...11,351,190
JBrowse link
G Gucy2d guanylate cyclase 2D, retinal involved_in ISO (MGI:5049799|PMID:21598940) UniProt PMID:21598940 MGI:5049799 NCBI chrNW_004955467:8,938,057...8,949,684
Ensembl chrNW_004955467:8,938,057...8,949,684
JBrowse link
G Nppa natriuretic peptide A acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004955486:2,061,196...2,062,805
Ensembl chrNW_004955486:2,060,735...2,063,003
JBrowse link
G Nppb natriuretic peptide B acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004955486:2,054,775...2,056,130 JBrowse link
G Nppc natriuretic peptide C acts_upstream_of ISO (PMID:1672777)
(MGI:2177134|PMID:11259675)
GO_Central PMID:1672777 PMID:11259675 MGI:2177134 NCBI chrNW_004955453:3,884,580...3,888,494
Ensembl chrNW_004955453:3,884,560...3,888,850
JBrowse link
G Npr1 natriuretic peptide receptor 1 involved_in ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004955545:323,386...338,654
Ensembl chrNW_004955545:323,956...338,097
JBrowse link
G Npr2 natriuretic peptide receptor 2 acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004955472:506,351...523,647
Ensembl chrNW_004955472:506,351...523,316
JBrowse link
CMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004955402:704...128,521
Ensembl chrNW_004955402:665...124,777
JBrowse link
coenzyme A biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004955412:10,350,088...10,369,806
Ensembl chrNW_004955412:10,349,593...10,369,806
JBrowse link
G Acot7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004955486:6,188,102...6,258,230
Ensembl chrNW_004955486:6,188,102...6,259,110
JBrowse link
G Coasy Coenzyme A synthase involved_in
acts_upstream_of_or_within
ISO (PMID:11923312)
(MGI:2181228|PMID:11980892)
UniProt
MGI
PMID:11923312 PMID:11980892 MGI:2181228 NCBI chrNW_004955451:16,457,707...16,460,631
Ensembl chrNW_004955451:16,457,707...16,460,631
JBrowse link
G Pank1 pantothenate kinase 1 acts_upstream_of_or_within ISO (MGI:4461354|PMID:20559429), (MGI:5446555|PMID:22815849)
(MGI:3607004|PMID:16040613)
MGI PMID:16040613 PMID:20559429 PMID:22815849 MGI:3607004 MGI:4461354 MGI:5446555 NCBI chrNW_004955425:3,384,023...3,433,808
Ensembl chrNW_004955425:3,384,200...3,432,431
JBrowse link
G Pank2 pantothenate kinase 2 acts_upstream_of_or_within ISO (MGI:5446555|PMID:22815849) MGI PMID:22815849 MGI:5446555 NCBI chrNW_004955415:14,722,951...14,752,493
Ensembl chrNW_004955415:14,723,087...14,751,423
JBrowse link
G Pank3 pantothenate kinase 3 involved_in
acts_upstream_of_or_within
ISO (PMID:20797618)
(MGI:3607004|PMID:16040613)
(PMID:30927326)
UniProt
MGI
PMID:16040613 PMID:20797618 PMID:30927326 MGI:3607004 NCBI chrNW_004955408:21,630,849...21,643,432
Ensembl chrNW_004955408:21,630,849...21,652,999
JBrowse link
G Ppcdc phosphopantothenoylcysteine decarboxylase involved_in ISO (PMID:11923312) UniProt PMID:11923312 NCBI chrNW_004955450:2,971,874...2,985,034
Ensembl chrNW_004955450:2,971,874...2,985,191
JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO (PMID:11923312)
(PMID:29754768)
UniProt PMID:11923312 PMID:29754768 NCBI chrNW_004955537:2,080,865...2,084,199
Ensembl chrNW_004955537:2,080,865...2,085,003
JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 involved_in ISO (PMID:24870241)
(PMID:16179339)
UniProt PMID:16179339 PMID:24870241 NCBI chrNW_004955537:773,664...811,084
Ensembl chrNW_004955537:774,002...813,254
JBrowse link
cyclic purine nucleotide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 involved_in ISO (PMID:23911318) UniProt PMID:23911318 NCBI chrNW_004955435:13,029,377...13,040,972
Ensembl chrNW_004955435:13,028,916...13,043,928
JBrowse link
dADP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004955402:704...128,521
Ensembl chrNW_004955402:665...124,777
JBrowse link
dAMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004955402:704...128,521
Ensembl chrNW_004955402:665...124,777
JBrowse link
dATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase acts_upstream_of_or_within ISO (MGI:3620422|PMID:12163459) MGI PMID:12163459 MGI:3620422 NCBI chrNW_004955437:17,279,541...17,786,140
Ensembl chrNW_004955437:17,279,240...17,786,079
JBrowse link
dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:192455 RGD:5133256 NCBI chrNW_004955464:11,179,432...11,213,147 JBrowse link
dCMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004955402:704...128,521
Ensembl chrNW_004955402:665...124,777
JBrowse link
deoxyribonucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rrm1 ribonucleotide reductase catalytic subunit M1 involved_in ISO (MGI:3846285|PMID:19176520) UniProt PMID:19176520 MGI:3846285 NCBI chrNW_004955414:19,850,523...19,904,879
Ensembl chrNW_004955414:19,850,530...19,905,266
JBrowse link
G Rrm2 ribonucleotide reductase regulatory subunit M2 involved_in ISO (MGI:3846285|PMID:19176520) UniProt PMID:19176520 MGI:3846285 NCBI chrNW_004955487:5,477,097...5,481,422
Ensembl chrNW_004955487:5,476,954...5,483,049
JBrowse link
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B acts_upstream_of_or_within ISO (MGI:2152627|PMID:11517226) MGI PMID:11517226 MGI:2152627 NCBI chrNW_004955417:26,949,686...26,976,976
Ensembl chrNW_004955417:26,949,686...26,976,726
JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 involved_in ISO (PMID:31201273) RGD
UniProt
PMID:4307347 PMID:31201273 RGD:5147877 NCBI chrNW_004955581:299,010...305,032
Ensembl chrNW_004955581:299,280...305,032
JBrowse link
dGDP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004955402:704...128,521
Ensembl chrNW_004955402:665...124,777
JBrowse link
diadenosine tetraphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gars1 glycyl-tRNA synthetase 1 involved_in ISO (PMID:19710017) UniProt PMID:19710017 NCBI chrNW_004955410:31,778,654...31,819,287
Ensembl chrNW_004955410:31,779,543...31,819,113
JBrowse link
G Kars1 lysyl-tRNA synthetase 1 involved_in ISO PMID:19524539
(PMID:19524539)
(PMID:23159739)
RGD
CAFA
UniProt
PMID:3988754 PMID:6626505 PMID:19524539 PMID:23159739 RGD:12793003 RGD:2303395 RGD:2303396 NCBI chrNW_004955484:1,924,523...1,939,777
Ensembl chrNW_004955484:1,924,523...1,940,552
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in ISO PMID:19524539 CAFA PMID:19524539 RGD:12793003 NCBI chrNW_004955442:17,284,232...17,380,026
Ensembl chrNW_004955442:17,284,232...17,380,020
JBrowse link
dolichyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490) UniProt PMID:28842490 NCBI chrNW_004955452:5,811,053...5,844,992
Ensembl chrNW_004955452:5,811,053...5,845,580
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490) UniProt PMID:28842490 NCBI chrNW_004955436:825,387...850,558
Ensembl chrNW_004955436:825,387...850,558
JBrowse link
dolichyl monophosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dolk dolichol kinase involved_in ISO (PMID:12213788), (PMID:16923818) UniProt PMID:12213788 PMID:16923818 NCBI chrNW_004955570:1,310,894...1,312,952
Ensembl chrNW_004955570:1,311,056...1,312,672
JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 ISO RGD PMID:192455 RGD:5133256 NCBI chrNW_004955487:2,010,126...2,024,804
Ensembl chrNW_004955487:2,010,228...2,029,175
JBrowse link
G Dtymk deoxythymidylate kinase acts_upstream_of_or_within ISO (MGI:77260|PMID:8845311) RGD
MGI
PMID:220041 PMID:8845311 MGI:77260 RGD:5133687 NCBI chrNW_004955542:155,741...163,759
Ensembl chrNW_004955542:155,742...163,759
JBrowse link
dTMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO (MGI:3849912|PMID:19513116) BHF-UCL PMID:19513116 MGI:3849912 NCBI chrNW_004955478:10,972,791...11,001,535
Ensembl chrNW_004955478:10,978,139...11,001,202
JBrowse link
G Tyms thymidylate synthetase involved_in ISO (PMID:11278511), (PMID:15093541), (PMID:8845352) RGD
CAFA
PMID:8845352 PMID:9894005 PMID:11278511 PMID:15093541 RGD:1545055 NCBI chrNW_004955402:9,295,862...9,304,952
Ensembl chrNW_004955402:9,296,321...9,306,631
JBrowse link
dTTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtymk deoxythymidylate kinase ISO RGD PMID:220041 RGD:5133687 NCBI chrNW_004955542:155,741...163,759
Ensembl chrNW_004955542:155,742...163,759
JBrowse link
G Tbpl1 TATA-box binding protein like 1 acts_upstream_of_or_within ISO (MGI:2159505|PMID:11861477) MGI PMID:11861477 MGI:2159505 NCBI chrNW_004955439:2,539,465...2,548,351
Ensembl chrNW_004955439:2,539,486...2,563,720
JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chrNW_004955464:11,179,432...11,213,147 JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 ISO RGD PMID:192455 RGD:5133256 NCBI chrNW_004955487:2,010,126...2,024,804
Ensembl chrNW_004955487:2,010,228...2,029,175
JBrowse link
dUMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dut deoxyuridine triphosphatase ISO RGD PMID:1315924 PMID:3032103 RGD:2300191 RGD:2301218 NCBI chrNW_004955409:5,574,810...5,584,135
Ensembl chrNW_004955409:5,574,694...5,584,134
JBrowse link
farnesyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdps farnesyl diphosphate synthase ISO RGD PMID:8188698 RGD:2316305 NCBI chrNW_004955545:1,757,090...1,765,028
Ensembl chrNW_004955545:1,757,418...1,765,028
JBrowse link
fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcdh glutaryl-CoA dehydrogenase ISO RGD PMID:6895440 RGD:1598697 NCBI chrNW_004955415:31,952,400...31,958,067
Ensembl chrNW_004955415:31,952,580...31,961,615
JBrowse link
GDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chrNW_004955581:299,010...305,032
Ensembl chrNW_004955581:299,280...305,032
JBrowse link
GDP-L-fucose salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcsk fucose kinase involved_in ISO (PMID:30503518) UniProt PMID:30503518 NCBI chrNW_004955484:3,259,165...3,278,621
Ensembl chrNW_004955484:3,263,795...3,278,078
JBrowse link
glyceraldehyde-3-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tkt transketolase involved_in ISO (PMID:9611778) UniProt PMID:9611778 NCBI chrNW_004955430:3,178,830...3,193,241
Ensembl chrNW_004955430:3,178,830...3,193,345
JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in ISO (PMID:18562316) UniProt PMID:18562316 NCBI chrNW_004955413:4,467,615...4,471,594
Ensembl chrNW_004955413:4,467,566...4,471,177
JBrowse link
glycerol-3-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gk glycerol kinase involved_in ISO (PMID:8651297) BHF-UCL PMID:8651297 NCBI chrNW_004955531:106,761...183,347 JBrowse link
glycerophospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO (MGI:3581335|PMID:15870270) MGI PMID:15870270 MGI:3581335 NCBI chrNW_004955409:37,318,597...37,329,068
Ensembl chrNW_004955409:37,318,597...37,329,155
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:17482562) UniProt PMID:17482562 NCBI chrNW_004955493:6,696,520...6,707,849
Ensembl chrNW_004955493:6,696,241...6,707,849
JBrowse link
G Far1 fatty acyl-CoA reductase 1 involved_in ISO (PMID:20071337) UniProt PMID:20071337 NCBI chrNW_004955414:28,938,535...28,996,622 JBrowse link
GMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gmps guanine monophosphate synthase acts_upstream_of_or_within ISO (PMID:8089153) RGD
MGI
PMID:3436958 PMID:8089153 RGD:1599004 NCBI chrNW_004955448:6,931,891...6,984,662
Ensembl chrNW_004955448:6,932,926...6,984,662
JBrowse link
GMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (MGI:1331314|PMID:10037486) MGI PMID:10037486 MGI:1331314 NCBI chrNW_004955473:462,940...510,006 JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic acts_upstream_of_or_within
involved_in
ISO (MGI:1329093|PMID:9535917)
(PMID:9535917), (PMID:9724629)
(PMID:10835346), (PMID:9535917)
MGI
HGNC-UCL
PMID:9535917 PMID:9724629 PMID:10835346 MGI:1329093 NCBI chrNW_004955445:7,472,579...7,492,632 JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory involved_in ISO (PMID:10835346), (PMID:16162815) UniProt PMID:10835346 PMID:16162815 NCBI chrNW_004955419:740,815...743,036
Ensembl chrNW_004955419:740,815...743,036
JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in ISO (PMID:10835346) UniProt PMID:10835346 NCBI chrNW_004955545:1,621,515...1,622,103
Ensembl chrNW_004955545:1,617,538...1,638,062
JBrowse link
G Mppe1 metallophosphoesterase 1 involved_in ISO (PMID:29374258) UniProt PMID:29374258 NCBI chrNW_004955402:1,167,711...1,182,410
Ensembl chrNW_004955402:1,172,704...1,181,908
JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 ISO RGD PMID:14734546 RGD:1303970 NCBI chrNW_004955403:3,527,398...3,582,004
Ensembl chrNW_004955403:3,527,138...3,582,004
JBrowse link
G Pgap2 post-GPI attachment to proteins 2 involved_in ISO (PMID:29374258)
PMID:16407401
UniProt PMID:16407401 PMID:29374258 RGD:8553507 NCBI chrNW_004955414:19,607,180...19,630,010
Ensembl chrNW_004955414:19,607,180...19,630,010
JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 involved_in ISO (PMID:29374258) UniProt PMID:29374258 NCBI chrNW_004955451:14,418,923...14,428,032
Ensembl chrNW_004955451:14,418,923...14,428,039
JBrowse link
G Pgap4 post-GPI attachment to proteins GalNAc transferase 4 involved_in ISO (PMID:29374258) UniProt PMID:29374258 NCBI chrNW_004955419:24,334,402...24,344,390
Ensembl chrNW_004955419:24,334,402...24,344,390
JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis class A acts_upstream_of_or_within ISO (MGI:80283|PMID:8611683) MGI PMID:8611683 MGI:80283 NCBI chrNW_004955519:2,852,605...2,865,848
Ensembl chrNW_004955519:2,852,555...2,867,600
JBrowse link
G Pigb phosphatidylinositol glycan anchor biosynthesis class B involved_in ISO (PMID:8861954) UniProt PMID:8861954 NCBI chrNW_004955409:562,575...577,082
Ensembl chrNW_004955409:562,688...577,082
JBrowse link
G Pigc phosphatidylinositol glycan anchor biosynthesis class C involved_in ISO (PMID:27694521)
(PMID:16162815)
UniProt PMID:16162815 PMID:27694521 NCBI chrNW_004955406:12,891,187...12,893,935
Ensembl chrNW_004955406:12,891,187...12,893,935
JBrowse link
G Pigf phosphatidylinositol glycan anchor biosynthesis class F involved_in ISO (MGI:1860649|PMID:10781593) UniProt PMID:10781593 MGI:1860649 NCBI chrNW_004955441:13,492,334...13,525,581 JBrowse link
G Pigg phosphatidylinositol glycan anchor biosynthesis class G acts_upstream_of_or_within ISO (PMID:15632136) MGI PMID:15632136 NCBI chrNW_004955514:119,804...152,603
Ensembl chrNW_004955514:120,287...151,827
JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis class H involved_in ISO (PMID:16162815) UniProt PMID:16162815 NCBI chrNW_004955466:2,601,368...2,616,255
Ensembl chrNW_004955466:2,601,394...2,616,255
JBrowse link
G Pigl phosphatidylinositol glycan anchor biosynthesis class L ISO RGD PMID:9188481 RGD:729509 NCBI chrNW_004955467:1,566,494...1,645,158 JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis class M ISO RGD PMID:11226175 RGD:70624 NCBI chrNW_004955468:11,817,647...11,820,456
Ensembl chrNW_004955468:11,818,604...11,819,872
JBrowse link
G Pigo phosphatidylinositol glycan anchor biosynthesis class O involved_in ISO (MGI:1860649|PMID:10781593) UniProt PMID:10781593 MGI:1860649 NCBI chrNW_004955472:1,084,932...1,094,243
Ensembl chrNW_004955472:1,084,932...1,094,243
JBrowse link
G Pigp phosphatidylinositol glycan anchor biosynthesis class P involved_in
acts_upstream_of_or_within
ISO (PMID:28334793)
(MGI:3804747|PMID:10944123)
(PMID:16162815)
UniProt
MGI
PMID:10944123 PMID:16162815 PMID:28334793 MGI:3804747 NCBI chrNW_004955407:36,178,323...36,185,317 JBrowse link
G Pigq phosphatidylinositol glycan anchor biosynthesis class Q involved_in
acts_upstream_of_or_within
ISO (PMID:16162815)
(MGI:1339481|PMID:10373468)
(MGI:1307040|PMID:9729469)
UniProt
MGI
PMID:9729469 PMID:10373468 PMID:16162815 MGI:1307040 MGI:1339481 NCBI chrNW_004955442:16,620,009...16,635,308
Ensembl chrNW_004955442:16,620,009...16,631,343
JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis class U involved_in ISO (PMID:15034568) HGNC-UCL PMID:15034568 NCBI chrNW_004955422:26,685,060...26,774,261
Ensembl chrNW_004955422:26,685,060...26,775,416
JBrowse link
G Pigv phosphatidylinositol glycan anchor biosynthesis class V involved_in ISO (PMID:15623507), (PMID:15720390) UniProt PMID:15623507 PMID:15720390 NCBI chrNW_004955452:6,128,262...6,139,204
Ensembl chrNW_004955452:6,128,262...6,139,204
JBrowse link
G Pigy phosphatidylinositol glycan anchor biosynthesis class Y acts_upstream_of_or_within ISO (PMID:16162815) MGI PMID:16162815 NCBI chrNW_004955474:11,945,871...11,946,419
Ensembl chrNW_004955474:11,944,302...11,947,092
JBrowse link
G Pigz phosphatidylinositol glycan anchor biosynthesis class Z involved_in ISO (PMID:15208306) UniProt PMID:15208306 NCBI chrNW_004955420:12,994,892...13,003,170 JBrowse link
G Pyurf PIGY upstream open reading frame involved_in ISO (PMID:16162815) HGNC-UCL PMID:16162815 NCBI chrNW_004955474:11,944,579...11,945,906 JBrowse link
GTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in ISO (PMID:7903306) UniProt PMID:7903306 NCBI chrNW_004955532:1,047,138...1,051,980
Ensembl chrNW_004955532:1,045,833...1,051,978
JBrowse link
IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 acts_upstream_of_or_within ISO (MGI:5506958|PMID:23911318)
(PMID:23911318)
MGI PMID:23911318 MGI:5506958 NCBI chrNW_004955435:13,029,377...13,040,972
Ensembl chrNW_004955435:13,028,916...13,043,928
JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 acts_upstream_of_or_within ISO (MGI:5506958|PMID:23911318), (MGI:5512796|PMID:23542464), (MGI:5529149|PMID:23078545)
(MGI:87193|PMID:9133604)
MGI PMID:9133604 PMID:23078545 PMID:23542464 PMID:23911318 MGI:5506958 MGI:5512796 MGI:5529149 MGI:87193 NCBI chrNW_004955414:26,073,192...26,116,448
Ensembl chrNW_004955414:26,072,855...26,116,448
JBrowse link
IMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd1 adenosine monophosphate deaminase 1 involved_in ISO (MGI:6152543|PMID:27896074) MGI PMID:27896074 MGI:6152543 NCBI chrNW_004955435:17,962,487...17,991,625
Ensembl chrNW_004955435:17,962,514...17,991,556
JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 involved_in ISO (MGI:5489878|PMID:22212473) MGI PMID:22212473 MGI:5489878 NCBI chrNW_004955435:13,029,377...13,040,972
Ensembl chrNW_004955435:13,028,916...13,043,928
JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5585332|PMID:24940686) MGI PMID:24940686 MGI:5585332 NCBI chrNW_004955414:26,073,192...26,116,448
Ensembl chrNW_004955414:26,072,855...26,116,448
JBrowse link
G Aprt adenine phosphoribosyltransferase involved_in ISO (MGI:1312996|PMID:9776749) MGI PMID:9776749 MGI:1312996 NCBI chrNW_004955541:2,687,938...2,690,906
Ensembl chrNW_004955541:2,687,938...2,690,906
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (MGI:85965|PMID:8878108)
(MGI:1331314|PMID:10037486)
MGI PMID:8878108 PMID:10037486 MGI:1331314 MGI:85965 NCBI chrNW_004955473:462,940...510,006 JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:20011604) DFLAT PMID:20011604 NCBI chrNW_004955428:17,840,554...17,894,779
Ensembl chrNW_004955428:17,840,628...17,894,773
JBrowse link
G Ip6k3 inositol hexakisphosphate kinase 3 acts_upstream_of_or_within ISO (PMID:11502751) MGI PMID:11502751 NCBI chrNW_004955437:2,128,337...2,150,714
Ensembl chrNW_004955437:2,125,222...2,149,242
JBrowse link
G Ipmk inositol polyphosphate multikinase acts_upstream_of_or_within ISO (MGI:3583505|PMID:15939867) MGI PMID:15939867 MGI:3583505 NCBI chrNW_004955425:11,949,849...12,000,610
Ensembl chrNW_004955425:11,945,858...11,985,023
JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:16973916 RGD:2299886 NCBI chrNW_004955445:15,787,496...15,823,859
Ensembl chrNW_004955445:15,787,496...15,823,859
JBrowse link
G Plcg2 phospholipase C gamma 2 acts_upstream_of_or_within ISO (MGI:85738|PMID:9013981) MGI PMID:9013981 MGI:85738 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986
JBrowse link
G Ptafr platelet activating factor receptor acts_upstream_of_or_within ISO (MGI:85738|PMID:9013981) MGI PMID:9013981 MGI:85738 NCBI chrNW_004955452:7,309,854...7,345,579
Ensembl chrNW_004955452:7,311,901...7,312,929
JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:12641450) UniProt PMID:12641450 NCBI chrNW_004955464:6,097,241...6,224,287
Ensembl chrNW_004955464:6,094,758...6,224,287
JBrowse link
isopentenyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvd mevalonate diphosphate decarboxylase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004955541:2,578,584...2,581,823
Ensembl chrNW_004955541:2,579,074...2,581,821
JBrowse link
G Mvk mevalonate kinase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004955455:8,933,250...8,953,883
Ensembl chrNW_004955455:8,930,125...8,953,894
JBrowse link
G Pmvk phosphomevalonate kinase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004955545:1,421,562...1,440,038
Ensembl chrNW_004955545:1,421,562...1,440,038
JBrowse link
long-chain fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl1 acyl-CoA synthetase long chain family member 1 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004955403:24,190,674...24,235,354
Ensembl chrNW_004955403:24,190,674...24,236,780
JBrowse link
G Acsl4 acyl-CoA synthetase long chain family member 4 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004955490:6,143,833...6,228,395
Ensembl chrNW_004955490:6,143,833...6,228,452
JBrowse link
G Acsl5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004955431:17,477,113...17,524,539
Ensembl chrNW_004955431:17,477,086...17,524,539
JBrowse link
G Acsl6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004955408:3,336,214...3,391,117 JBrowse link
malonyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO (MGI:3804564|PMID:18487439) UniProt PMID:18487439 MGI:3804564 NCBI chrNW_004955455:10,282,308...10,427,439
Ensembl chrNW_004955455:10,308,192...10,426,076
JBrowse link
mitochondrial acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpc1 mitochondrial pyruvate carrier 1 acts_upstream_of_or_within ISO (MGI:5428352|PMID:22628558) MGI PMID:22628558 MGI:5428352 NCBI chrNW_004955439:15,515,966...15,531,618
Ensembl chrNW_004955439:15,516,090...15,531,116
JBrowse link
G Mpc2 mitochondrial pyruvate carrier 2 acts_upstream_of_or_within ISO (MGI:5576400|PMID:24910426)
(MGI:5428352|PMID:22628558)
MGI PMID:22628558 PMID:24910426 MGI:5428352 MGI:5576400 NCBI chrNW_004955462:9,177,484...9,193,646 JBrowse link
G Pdha1 pyruvate dehydrogenase E1 alpha 1 subunit acts_upstream_of_or_within ISO (MGI:3817854|PMID:18586888) MGI PMID:18586888 MGI:3817854 NCBI chrNW_004955586:98,492...114,927
Ensembl chrNW_004955586:97,172...114,928
JBrowse link
mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955402:31,652,226...31,662,114
Ensembl chrNW_004955402:31,651,960...31,662,762
JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955458:4,188,167...4,195,575
Ensembl chrNW_004955458:4,186,461...4,195,494
JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955421:24,234,473...24,253,640
Ensembl chrNW_004955421:24,234,413...24,253,640
JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955495:6,664,394...6,666,693
Ensembl chrNW_004955495:6,664,394...6,666,693
JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955445:563,642...567,865
Ensembl chrNW_004955445:563,315...567,865
JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955404:11,420,964...11,421,171 JBrowse link
G Atp5mf ATP synthase membrane subunit f involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955460:15,129,651...15,136,722
Ensembl chrNW_004955460:15,129,651...15,136,722
JBrowse link
G Atp5mg ATP synthase membrane subunit g involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955412:19,555,736...19,563,094 JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955435:14,940,502...14,952,423
Ensembl chrNW_004955435:14,940,434...14,954,310
JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955553:1,893,767...1,897,175
Ensembl chrNW_004955553:1,892,670...1,897,175
JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004955407:25,601,253...25,609,933
Ensembl chrNW_004955407:25,601,083...25,609,888
JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP involved_in ISO (PMID:15850986) UniProt PMID:15850986 NCBI chrNW_004955407:33,288,194...33,298,817 JBrowse link
G Stoml2 stomatin like 2 involved_in ISO (PMID:21746876)
(MGI:3849358|PMID:19360003), (MGI:5438519|PMID:23028053)
UniProt PMID:19360003 PMID:21746876 PMID:23028053 MGI:3849358 MGI:5438519 NCBI chrNW_004955472:1,079,261...1,082,632
Ensembl chrNW_004955472:1,079,578...1,082,486
JBrowse link
Mo-molybdopterin cofactor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gphn gephyrin acts_upstream_of_or_within ISO (MGI:2182545|PMID:9812897) MGI PMID:9812897 MGI:2182545 NCBI chrNW_004955466:3,017,474...3,526,375
Ensembl chrNW_004955466:3,016,479...3,526,231
JBrowse link
G Mocs1 molybdenum cofactor synthesis 1 involved_in ISO (PMID:15180982)
(PMID:16021469), (PMID:9731530), (PMID:9921896)
UniProt PMID:9731530 PMID:9921896 PMID:15180982 PMID:16021469 NCBI chrNW_004955437:6,840,451...6,870,685
Ensembl chrNW_004955437:6,840,451...6,870,685
JBrowse link
G Mocs2 molybdenum cofactor synthesis 2 involved_in ISO (PMID:10053004)
(PMID:12732628), (PMID:15073332)
UniProt PMID:10053004 PMID:12732628 PMID:15073332 NCBI chrNW_004955446:14,295,737...14,305,735
Ensembl chrNW_004955446:14,295,737...14,307,838
JBrowse link
G Mocs3 molybdenum cofactor synthesis 3 involved_in ISO (PMID:15073332) UniProt PMID:15073332 NCBI chrNW_004955445:7,470,030...7,472,323
Ensembl chrNW_004955445:7,470,888...7,472,267
JBrowse link
molybdopterin cofactor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gphn gephyrin involved_in ISO (PMID:9990024)
(PMID:26613940)
CAFA
UniProt
PMID:9990024 PMID:26613940 NCBI chrNW_004955466:3,017,474...3,526,375
Ensembl chrNW_004955466:3,016,479...3,526,231
JBrowse link
G Mocs1 molybdenum cofactor synthesis 1 acts_upstream_of_or_within ISO (MGI:2447229|PMID:12471057), (MGI:3576970|PMID:15862276), (MGI:3757917|PMID:17236133) MGI PMID:12471057 PMID:15862276 PMID:17236133 MGI:2447229 MGI:3576970 MGI:3757917 NCBI chrNW_004955437:6,840,451...6,870,685
Ensembl chrNW_004955437:6,840,451...6,870,685
JBrowse link
NAD biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in ISO (PMID:28792876) UniProt PMID:28792876 NCBI chrNW_004955441:10,114,863...10,128,948
Ensembl chrNW_004955441:10,110,380...10,129,015
JBrowse link
G Kynu kynureninase involved_in ISO (PMID:28792876) UniProt PMID:28792876 NCBI chrNW_004955440:9,420,141...9,536,767
Ensembl chrNW_004955440:9,420,009...9,536,761
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase acts_upstream_of_or_within ISO (MGI:3522067|PMID:15381699) MGI PMID:15381699 MGI:3522067 NCBI chrNW_004955410:10,717,664...10,742,109
Ensembl chrNW_004955410:10,717,664...10,751,177
JBrowse link
G Naprt nicotinate phosphoribosyltransferase ISO RGD PMID:8694849 RGD:2289495 NCBI chrNW_004955454:2,280,223...2,283,613
Ensembl chrNW_004955454:2,280,223...2,283,613
JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (MGI:6206974|PMID:27735788)
(MGI:3522067|PMID:15381699), (MGI:3654729|PMID:16914673)
UniProt
MGI
PMID:15381699 PMID:16914673 PMID:27735788 MGI:3522067 MGI:3654729 MGI:6206974 NCBI chrNW_004955486:3,637,794...3,655,744
Ensembl chrNW_004955486:3,637,794...3,655,598
JBrowse link
G Nmnat2 nicotinamide nucleotide adenylyltransferase 2 ISO RGD PMID:22449973 RGD:13782043 NCBI chrNW_004955406:22,077,247...22,274,668
Ensembl chrNW_004955406:22,076,343...22,227,200
JBrowse link
G Nmnat3 nicotinamide nucleotide adenylyltransferase 3 acts_upstream_of_or_within ISO (MGI:3654729|PMID:16914673) MGI PMID:16914673 MGI:3654729 NCBI chrNW_004955508:5,909,808...6,024,301
Ensembl chrNW_004955508:5,913,898...6,022,128
JBrowse link
G Qprt quinolinate phosphoribosyltransferase ISO RGD PMID:8694849 RGD:2289495 NCBI chrNW_004955493:7,225,472...7,243,078
Ensembl chrNW_004955493:7,224,983...7,242,852
JBrowse link
NADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G6pd glucose-6-phosphate dehydrogenase acts_upstream_of_or_within ISO (MGI:1349468|PMID:3377761), (MGI:2387959|PMID:10627286), (MGI:3607389|PMID:14757696), (MGI:3694178|PMID:15998684), (MGI:49164|PMID:1953691), (MGI:85983|PMID:9067418)
(MGI:1097071|PMID:9330624), (MGI:1202104|PMID:9539108), (MGI:1261671|PMID:9627357), (MGI:54902|PMID:7439685), (MGI:87492|PMID:9169132)
(MGI:3522057|PMID:15271799)
MGI PMID:1953691 PMID:3377761 PMID:7439685 PMID:9067418 PMID:9169132 PMID:9330624 PMID:9539108 PMID:9627357 PMID:10627286 PMID:14757696 PMID:15271799 PMID:15998684 MGI:1097071 MGI:1202104 MGI:1261671 MGI:1349468 MGI:2387959 MGI:3522057 MGI:3607389 MGI:3694178 MGI:49164 MGI:54902 MGI:85983 MGI:87492 NCBI chrNW_004955580:1,045,294...1,058,129
Ensembl chrNW_004955580:1,045,294...1,057,083
JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 ISO RGD PMID:21641335 RGD:11522736 NCBI chrNW_004955416:15,197,611...15,212,919
Ensembl chrNW_004955416:15,197,366...15,223,363
JBrowse link
G Nadk NAD kinase ISO RGD PMID:22550069 RGD:13703105 NCBI chrNW_004955486:9,191,923...9,217,547
Ensembl chrNW_004955486:9,191,923...9,217,538
JBrowse link
negative regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:21325440 RGD:9685453 NCBI chrNW_004955507:2,035,918...2,141,327
Ensembl chrNW_004955507:2,036,050...2,137,377
JBrowse link
G Flcn folliculin involved_in ISO (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chrNW_004955577:672,774...694,140 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (PMID:20165904) BHF-UCL PMID:20165904 NCBI chrNW_004955453:5,680,418...5,913,236
Ensembl chrNW_004955453:5,680,211...5,911,589
JBrowse link
negative regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpca hippocalcin ISO RGD PMID:15336960 RGD:9686438 NCBI chrNW_004955452:11,142,282...11,150,798
Ensembl chrNW_004955452:11,140,373...11,154,261
JBrowse link
G Rd3 RD3 regulator of GUCY2D involved_in ISO (PMID:21928830), (PMID:30559291)
(MGI:5810226|PMID:27471269)
UniProt PMID:21928830 PMID:27471269 PMID:30559291 MGI:5810226 NCBI chrNW_004955489:896,964...903,855 JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plek pleckstrin involved_in ISO (PMID:7559487), (PMID:7782310) BHF-UCL PMID:7559487 PMID:7782310 NCBI chrNW_004955424:16,494,052...16,524,790
Ensembl chrNW_004955424:16,493,960...16,524,998
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:7535379 RGD:7777104 NCBI chrNW_004955425:6,176,335...7,335,867
Ensembl chrNW_004955425:6,176,432...7,331,446
JBrowse link
negative regulation of phosphatidate phosphatase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpin1 lipin 1 ISO RGD PMID:21715287 RGD:38599010 NCBI chrNW_004955487:6,139,188...6,207,316
Ensembl chrNW_004955487:6,138,926...6,210,012
JBrowse link
negative regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat1 lysophosphatidylcholine acyltransferase 1 acts_upstream_of_or_within ISO (MGI:4460850|PMID:20018880) MGI PMID:20018880 MGI:4460850 NCBI chrNW_004955504:760,941...791,996
Ensembl chrNW_004955504:758,881...791,996
JBrowse link
negative regulation of phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor subunit A involved_in ISO (PMID:2538439) BHF-UCL PMID:2538439 NCBI chrNW_004955460:8,328,400...8,346,755
Ensembl chrNW_004955460:8,326,891...8,346,550
JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISO (PMID:2538439) BHF-UCL PMID:2538439 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
JBrowse link
negative regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISO (PMID:24201375) ARUK-UCL PMID:24201375 RGD:14697729 NCBI chrNW_004955513:5,035,879...5,051,140
Ensembl chrNW_004955513:5,033,771...5,051,200
JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004955524:803,793...821,920
Ensembl chrNW_004955524:805,014...821,838
JBrowse link
nucleoside diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd8 ectonucleoside triphosphate diphosphohydrolase 8 acts_upstream_of_or_within ISO (MGI:3043620|PMID:15122917) MGI PMID:15122917 MGI:3043620 NCBI chrNW_004955513:5,352,843...5,357,671
Ensembl chrNW_004955513:5,353,229...5,356,019
JBrowse link
nucleoside monophosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd8 ectonucleoside triphosphate diphosphohydrolase 8 acts_upstream_of_or_within ISO (MGI:3043620|PMID:15122917) MGI PMID:15122917 MGI:3043620 NCBI chrNW_004955513:5,352,843...5,357,671
Ensembl chrNW_004955513:5,353,229...5,356,019
JBrowse link
nucleoside triphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004955419:799,415...807,138
Ensembl chrNW_004955419:799,410...811,029
JBrowse link
G Ak4 adenylate kinase 4 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004955423:25,395,086...25,402,324
Ensembl chrNW_004955423:25,395,836...25,427,474
JBrowse link
G Ak5 adenylate kinase 5 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004955423:15,587,233...15,796,314
Ensembl chrNW_004955423:15,587,233...15,796,314
JBrowse link
G Ak7 adenylate kinase 7 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004955438:18,178,822...18,233,051
Ensembl chrNW_004955438:18,178,822...18,233,051
JBrowse link
G Ak8 adenylate kinase 8 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004955513:2,069,187...2,185,469
Ensembl chrNW_004955513:2,065,004...2,185,404
JBrowse link
G Cmpk1 cytidine/uridine monophosphate kinase 1 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004955464:11,179,432...11,213,147 JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004955487:2,010,126...2,024,804
Ensembl chrNW_004955487:2,010,228...2,029,175
JBrowse link
nucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtymk deoxythymidylate kinase acts_upstream_of_or_within ISO (MGI:77260|PMID:8845311) MGI PMID:8845311 MGI:77260 NCBI chrNW_004955542:155,741...163,759
Ensembl chrNW_004955542:155,742...163,759
JBrowse link
G Pnp purine nucleoside phosphorylase involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chrNW_004955550:1,290,816...1,299,553
Ensembl chrNW_004955550:1,290,244...1,298,068
JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:9748490 RGD:1599724 NCBI chrNW_004955490:8,303,775...8,330,713 JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:9748490 RGD:1599724 NCBI chrNW_004955544:480,587...512,019
Ensembl chrNW_004955544:478,954...512,614
JBrowse link
phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase involved_in ISO (PMID:18606822) UniProt PMID:18606822 NCBI chrNW_004955420:27,484,500...27,508,360
Ensembl chrNW_004955420:27,482,709...27,508,360
JBrowse link
G Agpat1 1-acylglycerol-3-phosphate O-acyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:9212163)
(MGI:1097350|PMID:9299423)
BHF-UCL
MGI
PMID:9212163 PMID:9299423 MGI:1097350 NCBI chrNW_004955437:633,522...642,659 JBrowse link
G Agpat2 1-acylglycerol-3-phosphate O-acyltransferase 2 involved_in ISO (PMID:9212163) BHF-UCL PMID:9212163 NCBI chrNW_004955513:4,142,074...4,145,097
Ensembl chrNW_004955513:4,135,460...4,149,677
JBrowse link
G Dgka diacylglycerol kinase alpha involved_in ISO (PMID:15544348), (PMID:2175712), (PMID:22627129)
(PMID:23949095)
UniProt PMID:2175712 PMID:15544348 PMID:22627129 PMID:23949095 NCBI chrNW_004955458:3,517,519...3,544,651
Ensembl chrNW_004955458:3,524,542...3,544,374
JBrowse link
G Dgkb diacylglycerol kinase beta involved_in ISO PMID:23949095 UniProt PMID:23949095 RGD:30309912 NCBI chrNW_004955410:17,677,375...18,304,409
Ensembl chrNW_004955410:17,676,930...18,243,869
JBrowse link
G Dgkd diacylglycerol kinase delta involved_in ISO (PMID:17880279), (PMID:23949095) UniProt PMID:17880279 PMID:23949095 NCBI chrNW_004955453:2,740,922...2,802,669
Ensembl chrNW_004955453:2,742,842...2,835,811
JBrowse link
G Dgke diacylglycerol kinase epsilon involved_in ISO (PMID:15544348), (PMID:19744926), (PMID:22108654) UniProt PMID:15544348 PMID:19744926 PMID:22108654 NCBI chrNW_004955451:5,966,773...5,988,004
Ensembl chrNW_004955451:5,969,070...5,988,004
JBrowse link
G Dgkg diacylglycerol kinase gamma involved_in ISO (PMID:8034597)
(MGI:6431961|PMID:32033984)
UniProt PMID:8034597 PMID:32033984 MGI:6431961 NCBI chrNW_004955420:21,296,515...21,481,651
Ensembl chrNW_004955420:21,296,515...21,481,679
JBrowse link
G Dgkh diacylglycerol kinase eta involved_in ISO (MGI:6253974|PMID:27643686) UniProt PMID:27643686 MGI:6253974 NCBI chrNW_004955518:4,104,700...4,263,657
Ensembl chrNW_004955518:4,113,265...4,208,449
JBrowse link
G Dgki diacylglycerol kinase iota involved_in ISO PMID:15024004 UniProt PMID:15024004 RGD:1302915 NCBI chrNW_004955494:5,119,419...5,541,058
Ensembl chrNW_004955494:5,264,414...5,539,540
JBrowse link
G Dgkq diacylglycerol kinase theta involved_in ISO (PMID:22732145), (PMID:23949095), (PMID:9099683)
(PMID:23610160), (PMID:23767959)
UniProt
ParkinsonsUK-UCL
PMID:9099683 PMID:22732145 PMID:23610160 PMID:23767959 PMID:23949095 NCBI chrNW_004955514:452,548...475,240
Ensembl chrNW_004955514:453,886...464,978
JBrowse link
G Dgkz diacylglycerol kinase zeta involved_in ISO (PMID:15544348), (PMID:19744926)
(MGI:2672999|PMID:12883552), (MGI:6201900|PMID:27739494)
UniProt PMID:12883552 PMID:15544348 PMID:19744926 PMID:27739494 MGI:2672999 MGI:6201900 NCBI chrNW_004955422:1,658,237...1,687,000
Ensembl chrNW_004955422:1,657,926...1,695,404
JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in ISO PMID:22905194 UniProt PMID:22905194 RGD:30309909 NCBI chrNW_004955431:17,291,890...17,363,611
Ensembl chrNW_004955431:17,291,270...17,363,714
JBrowse link
G Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial involved_in ISO (MGI:6228436|PMID:22905194) UniProt PMID:22905194 MGI:6228436 NCBI chrNW_004955470:3,633,076...3,643,635
Ensembl chrNW_004955470:3,632,869...3,643,642
JBrowse link
G Lpin1 lipin 1 ISO RGD PMID:21715287 RGD:38599010 NCBI chrNW_004955487:6,139,188...6,207,316
Ensembl chrNW_004955487:6,138,926...6,210,012
JBrowse link
G Pnpla3 patatin like phospholipase domain containing 3 involved_in ISO (PMID:22560221)
(MGI:5426312|PMID:22560221)
BHF-UCL PMID:22560221 MGI:5426312 NCBI chrNW_004955413:28,879,646...28,896,224
Ensembl chrNW_004955413:28,879,748...28,893,938
JBrowse link
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 acts_upstream_of_or_within ISO (MGI:2449823|PMID:12456676) MGI PMID:12456676 MGI:2449823 NCBI chrNW_004955423:7,393,186...7,414,199
Ensembl chrNW_004955423:7,393,186...7,423,903
JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004955524:803,793...821,920
Ensembl chrNW_004955524:805,014...821,838
JBrowse link
phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in ISO (PMID:4335615) BHF-UCL PMID:4335615 NCBI chrNW_004955412:18,170,331...18,172,298
Ensembl chrNW_004955412:18,170,331...18,172,298
JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:14967812) BHF-UCL PMID:14967812 NCBI chrNW_004955468:12,977,956...12,979,282
Ensembl chrNW_004955468:12,977,956...12,979,753
JBrowse link
G Cept1 choline/ethanolamine phosphotransferase 1 acts_upstream_of_or_within ISO (MGI:4460850|PMID:20018880) MGI PMID:20018880 MGI:4460850 NCBI chrNW_004955435:14,704,269...14,743,765
Ensembl chrNW_004955435:14,704,269...14,743,765
JBrowse link
G Chka choline kinase alpha involved_in
acts_upstream_of_or_within
ISO (PMID:19915674)
(MGI:3623691|PMID:16371353)
UniProt
MGI
PMID:16371353 PMID:19915674 MGI:3623691 NCBI chrNW_004955422:17,710,981...17,766,256
Ensembl chrNW_004955422:17,710,434...17,766,256
JBrowse link
G Chpt1 choline phosphotransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:10893425)
(MGI:4460850|PMID:20018880)
UniProt
MGI
PMID:10893425 PMID:20018880 MGI:4460850 NCBI chrNW_004955405:37,081,024...37,093,798 JBrowse link
G Dhrs7b dehydrogenase/reductase 7B acts_upstream_of_or_within ISO (MGI:6103958|PMID:28930673) MGI PMID:28930673 MGI:6103958 NCBI chrNW_004955577:1,071,904...1,122,204
Ensembl chrNW_004955577:1,071,775...1,121,940
JBrowse link
G Fabp5 fatty acid binding protein 5 acts_upstream_of_or_within ISO (MGI:3045488|PMID:15164767) MGI PMID:15164767 MGI:3045488 NCBI chrNW_004955444:325,515...329,248
Ensembl chrNW_004955444:325,515...331,516
JBrowse link
G Fgf7 fibroblast growth factor 7 ISO surfactant disaturated phosphatidylcholine (DSPC) synthesis RGD PMID:11316745 RGD:68696 NCBI chrNW_004955409:4,633,542...4,686,768
Ensembl chrNW_004955409:4,632,858...4,686,860
JBrowse link
G Gpat4 glycerol-3-phosphate acyltransferase 4 involved_in ISO (PMID:18238778) UniProt PMID:18238778 NCBI chrNW_004955536:1,266,920...1,313,765
Ensembl chrNW_004955536:1,265,409...1,313,326
JBrowse link
G Lcat lecithin-cholesterol acyltransferase involved_in ISO (PMID:11966470)
(PMID:12354767)
BHF-UCL
UniProt
PMID:11966470 PMID:12354767 NCBI chrNW_004955484:8,772,692...8,776,122
Ensembl chrNW_004955484:8,772,692...8,776,122
JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline involved_in
acts_upstream_of_or_within
ISO (MGI:2667298|PMID:12842190)
(MGI:2159547|PMID:11829742)
(MGI:3575987|PMID:15798219)
PMID:8185307
PMID:8381041
(PMID:10480912)
RGD
UniProt
MGI
PMID:8185307 PMID:8381041 PMID:10480912 PMID:11829742 PMID:12718547 PMID:12842190 PMID:15798219 MGI:2159547 MGI:2667298 MGI:3575987 RGD:39458015 RGD:729578 RGD:729598 NCBI chrNW_004955420:12,464,857...12,513,017
Ensembl chrNW_004955420:12,464,857...12,500,574
JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline involved_in ISO (PMID:10480912)
(MGI:2667298|PMID:12842190)
UniProt PMID:10480912 PMID:12842190 MGI:2667298 NCBI chrNW_004955509:4,896,208...4,990,101
Ensembl chrNW_004955509:4,896,190...4,990,149
JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase ISO RGD PMID:8344945 RGD:729486 NCBI chrNW_004955577:365,031...443,138
Ensembl chrNW_004955577:367,288...443,138
JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004955524:803,793...821,920
Ensembl chrNW_004955524:805,014...821,838
JBrowse link
phosphatidylethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase involved_in ISO (MGI:5436199|PMID:22503541) UniProt PMID:22503541 MGI:5436199 NCBI chrNW_004955467:10,032,792...10,039,789 JBrowse link
G Chka choline kinase alpha involved_in ISO (PMID:19915674) UniProt PMID:19915674 NCBI chrNW_004955422:17,710,981...17,766,256
Ensembl chrNW_004955422:17,710,434...17,766,256
JBrowse link
G Chkb choline kinase beta involved_in ISO (PMID:19915674) UniProt PMID:19915674 NCBI chrNW_004955413:33,588,375...33,592,054
Ensembl chrNW_004955413:33,588,600...33,591,758
JBrowse link
G Etnk1 ethanolamine kinase 1 involved_in ISO (PMID:11044454) UniProt PMID:11044454 NCBI chrNW_004955413:18,036,646...18,094,875
Ensembl chrNW_004955413:18,036,646...18,089,370
JBrowse link
G Etnk2 ethanolamine kinase 2 acts_upstream_of_or_within ISO (MGI:3695773|PMID:16861741) MGI PMID:16861741 MGI:3695773 NCBI chrNW_004955406:39,996,850...40,013,753
Ensembl chrNW_004955406:39,996,850...40,013,753
JBrowse link
G Pcyt2 phosphate cytidylyltransferase 2, ethanolamine involved_in ISO (PMID:31637422)
(MGI:3709941|PMID:17325045)
UniProt PMID:17325045 PMID:31637422 MGI:3709941 NCBI chrNW_004955506:1,258,993...1,266,108
Ensembl chrNW_004955506:1,256,770...1,266,762
JBrowse link
G Pisd phosphatidylserine decarboxylase involved_in ISO (PMID:30488656), (PMID:30858161) UniProt PMID:30488656 PMID:30858161 NCBI chrNW_004955455:5,744,816...5,789,408
Ensembl chrNW_004955455:5,744,816...5,789,534
JBrowse link
G Selenoi selenoprotein I involved_in ISO (PMID:17132865)
(PMID:28052917), (PMID:29500230)
HGNC
UniProt
PMID:17132865 PMID:28052917 PMID:29500230 NCBI chrNW_004955469:8,369,499...8,410,628
Ensembl chrNW_004955469:8,369,479...8,408,659
JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004955524:803,793...821,920
Ensembl chrNW_004955524:805,014...821,838
JBrowse link
phosphatidylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in ISO (PMID:19075029) UniProt PMID:19075029 NCBI chrNW_004955431:17,291,890...17,363,611
Ensembl chrNW_004955431:17,291,270...17,363,714
JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004955524:803,793...821,920
Ensembl chrNW_004955524:805,014...821,838
JBrowse link
phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase involved_in ISO (PMID:8110188), (PMID:9407135) RGD
UniProt
PMID:7998949 PMID:8110188 PMID:8804431 PMID:9407135 RGD:1626301 RGD:724663 NCBI chrNW_004955493:7,087,491...7,091,306
Ensembl chrNW_004955493:7,087,491...7,092,809
JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 involved_in ISO (PMID:9407135) UniProt PMID:9407135 NCBI chrNW_004955474:5,057,833...5,104,235
Ensembl chrNW_004955474:5,057,833...5,104,235
JBrowse link
G Dgke diacylglycerol kinase epsilon involved_in ISO (MGI:6414743|PMID:19744926) UniProt PMID:19744926 MGI:6414743 NCBI chrNW_004955451:5,966,773...5,988,004
Ensembl chrNW_004955451:5,969,070...5,988,004
JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:20011604) DFLAT PMID:20011604 NCBI chrNW_004955428:17,840,554...17,894,779
Ensembl chrNW_004955428:17,840,628...17,894,773
JBrowse link
G Impa1 inositol monophosphatase 1 involved_in ISO (PMID:1377913) RGD
UniProt
PMID:1377913 PMID:11853098 RGD:2302239 NCBI chrNW_004955417:14,114...40,128
Ensembl chrNW_004955417:12,504...40,902
JBrowse link
G Inppl1 inositol polyphosphate phosphatase like 1 acts_upstream_of_or_within ISO (MGI:5008671|PMID:21624956) MGI PMID:21624956 MGI:5008671 NCBI chrNW_004955414:19,146,304...19,163,923
Ensembl chrNW_004955414:19,145,432...19,163,923
JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 involved_in ISO (PMID:18094042) UniProt PMID:18094042 NCBI chrNW_004955604:90,683...99,067
Ensembl chrNW_004955604:90,362...99,986
JBrowse link
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha involved_in ISO (PMID:11279162) UniProt PMID:11279162 NCBI chrNW_004955507:3,729,947...3,761,703
Ensembl chrNW_004955507:3,730,071...3,756,880
JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase type 1 alpha acts_upstream_of_or_within ISO (MGI:4844021|PMID:20622009) MGI PMID:20622009 MGI:4844021 NCBI chrNW_004955588:555,818...605,459
Ensembl chrNW_004955588:555,821...605,723
JBrowse link
G Pip5k1b phosphatidylinositol-4-phosphate 5-kinase type 1 beta acts_upstream_of_or_within ISO (MGI:4844021|PMID:20622009) MGI PMID:20622009 MGI:4844021 NCBI chrNW_004955434:4,020,219...4,315,072
Ensembl chrNW_004955434:4,019,847...4,315,072
JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma acts_upstream_of_or_within ISO (MGI:4844021|PMID:20622009) MGI PMID:20622009 MGI:4844021 NCBI chrNW_004955495:5,573,549...5,616,957
Ensembl chrNW_004955495:5,573,549...5,617,847
JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (PMID:11606584), (PMID:12181444) UniProt PMID:11606584 PMID:12181444 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986
JBrowse link
G Sh3yl1 SH3 and SYLF domain containing 1 acts_upstream_of_or_within ISO (MGI:5008671|PMID:21624956) MGI PMID:21624956 MGI:5008671 NCBI chrNW_004955487:258,116...290,377
Ensembl chrNW_004955487:257,869...289,832
JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004955524:803,793...821,920
Ensembl chrNW_004955524:805,014...821,838
JBrowse link
phosphatidylinositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efr3b EFR3 homolog B involved_in ISO (PMID:23229899) UniProt PMID:23229899 NCBI chrNW_004955469:7,159,087...7,215,234
Ensembl chrNW_004955469:7,159,087...7,215,627
JBrowse link
G Fam126a family with sequence similarity 126 member A involved_in ISO (PMID:26571211) UniProt PMID:26571211 NCBI chrNW_004955410:25,274,360...25,342,112
Ensembl chrNW_004955410:25,227,280...25,342,106
JBrowse link
G Ip6k1 inositol hexakisphosphate kinase 1 involved_in ISO (PMID:10574768) UniProt PMID:10574768 NCBI chrNW_004955532:1,625,298...1,644,973
Ensembl chrNW_004955532:1,625,298...1,644,973
JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in ISO (PMID:10574768) UniProt PMID:10574768 NCBI chrNW_004955532:766,577...794,461
Ensembl chrNW_004955532:766,577...794,409
JBrowse link
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha involved_in ISO (PMID:25168678) UniProt PMID:25168678 NCBI chrNW_004955507:3,729,947...3,761,703
Ensembl chrNW_004955507:3,730,071...3,756,880
JBrowse link
G Pi4ka phosphatidylinositol 4-kinase alpha involved_in ISO (MGI:5476893|PMID:23229899) UniProt PMID:23229899 MGI:5476893 NCBI chrNW_004955442:19,446,955...19,594,790
Ensembl chrNW_004955442:19,446,955...19,598,725
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO RGD PMID:12882977 RGD:4144086 NCBI chrNW_004955420:8,355,415...8,427,024
Ensembl chrNW_004955420:8,356,353...8,427,024
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta ISO RGD PMID:12882977 RGD:4144086 NCBI chrNW_004955501:251,829...381,255
Ensembl chrNW_004955501:259,645...379,909
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma ISO RGD PMID:12882977 RGD:4144086 NCBI chrNW_004955410:11,402,476...11,433,335
Ensembl chrNW_004955410:11,402,520...11,437,422
JBrowse link
G Smg1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase involved_in ISO (PMID:11331269) UniProt PMID:11331269 NCBI chrNW_004955442:2,553,135...2,651,772
Ensembl chrNW_004955442:2,553,143...2,651,772
JBrowse link
G Tmem150a transmembrane protein 150A involved_in ISO (PMID:25608530) UniProt PMID:25608530 NCBI chrNW_004955424:1,903,065...1,907,046
Ensembl chrNW_004955424:1,903,065...1,907,046
JBrowse link
G Ttc7b tetratricopeptide repeat domain 7B involved_in ISO (PMID:23229899), (PMID:26571211) UniProt PMID:23229899 PMID:26571211 NCBI chrNW_004955438:12,946,594...13,165,239
Ensembl chrNW_004955438:12,946,549...13,187,375
JBrowse link
phosphatidylinositol-3-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha acts_upstream_of_or_within ISO (MGI:5565574|PMID:24098492) MGI PMID:24098492 MGI:5565574 NCBI chrNW_004955414:31,896,161...31,999,730
Ensembl chrNW_004955414:31,896,161...31,999,730
JBrowse link
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta acts_upstream_of_or_within ISO (MGI:5565574|PMID:24098492) MGI PMID:24098492 MGI:5565574 NCBI chrNW_004955406:40,247,690...40,317,556
Ensembl chrNW_004955406:40,247,382...40,317,556
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 acts_upstream_of_or_within ISO (MGI:5565574|PMID:24098492) MGI PMID:24098492 MGI:5565574 NCBI chrNW_004955402:28,081,150...28,195,305
Ensembl chrNW_004955402:28,081,098...28,196,252
JBrowse link
phosphatidylserine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plscr1 phospholipid scramblase 1 involved_in ISO (MGI:5284813|PMID:12509439) UniProt PMID:12509439 MGI:5284813 NCBI chrNW_004955474:10,953,381...10,989,100 JBrowse link
G Ptdss1 phosphatidylserine synthase 1 involved_in ISO (PMID:19014349) FlyBase PMID:19014349 NCBI chrNW_004955417:12,268,908...12,327,127
Ensembl chrNW_004955417:12,268,107...12,327,127
JBrowse link
G Ptdss2 phosphatidylserine synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:19014349)
(MGI:2446765|PMID:12361952)
FlyBase
MGI
PMID:12361952 PMID:19014349 MGI:2446765 NCBI chrNW_004955476:11,554,962...11,585,574
Ensembl chrNW_004955476:11,554,962...11,581,906
JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) UniProt PMID:19523918 NCBI chrNW_004955524:803,793...821,920
Ensembl chrNW_004955524:805,014...821,838
JBrowse link
phosphocreatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ckm creatine kinase, M-type acts_upstream_of_or_within ISO (MGI:3513707|PMID:15601660) RGD
MGI
PMID:12069495 PMID:15601660 MGI:3513707 RGD:1359082 NCBI chrNW_004955555:2,318,072...2,330,733
Ensembl chrNW_004955555:2,318,072...2,336,811
JBrowse link
phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:14711823 RGD:2312802 NCBI chrNW_004955431:17,477,113...17,524,539
Ensembl chrNW_004955431:17,477,086...17,524,539
JBrowse link
G Acsl6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:15655248 RGD:2312811 NCBI chrNW_004955408:3,336,214...3,391,117 JBrowse link
G Fgf7 fibroblast growth factor 7 ISO RGD PMID:11316745 RGD:68696 NCBI chrNW_004955409:4,633,542...4,686,768
Ensembl chrNW_004955409:4,632,858...4,686,860
JBrowse link
G Gpat3 glycerol-3-phosphate acyltransferase 3 involved_in ISO (MGI:6467919|PMID:11003606) UniProt PMID:11003606 MGI:6467919 NCBI chrNW_004955474:6,119,516...6,192,784
Ensembl chrNW_004955474:6,118,437...6,193,847
JBrowse link
G Hexb hexosaminidase subunit beta acts_upstream_of_or_within ISO (MGI:3047051|PMID:15198669) MGI PMID:15198669 MGI:3047051 NCBI chrNW_004955425:25,942,341...25,961,312
Ensembl chrNW_004955425:25,942,278...25,961,312
JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 involved_in ISO (MGI:3690244|PMID:16704971) UniProt PMID:16704971 MGI:3690244 NCBI chrNW_004955504:760,941...791,996
Ensembl chrNW_004955504:758,881...791,996
JBrowse link
G Mboat1 membrane bound O-acyltransferase domain containing 1 involved_in ISO (MGI:6436389|PMID:18287005) UniProt PMID:18287005 MGI:6436389 NCBI chrNW_004955483:6,273,729...6,379,844
Ensembl chrNW_004955483:6,273,729...6,381,559
JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase type 1 alpha involved_in ISO (PMID:15157668) UniProt PMID:15157668 NCBI chrNW_004955588:555,818...605,459
Ensembl chrNW_004955588:555,821...605,723
JBrowse link
G Ppard peroxisome proliferator activated receptor delta ISO RGD PMID:17148578 RGD:2324892 NCBI chrNW_004955437:3,285,281...3,354,099
Ensembl chrNW_004955437:3,288,830...3,357,048
JBrowse link
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 acts_upstream_of_or_within ISO (MGI:2449823|PMID:12456676) MGI PMID:12456676 MGI:2449823 NCBI chrNW_004955423:7,393,186...7,414,199
Ensembl chrNW_004955423:7,393,186...7,423,903
JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO (MGI:3850579|PMID:19515693) MGI PMID:19515693 MGI:3850579 NCBI chrNW_004955419:20,811,931...20,844,420
Ensembl chrNW_004955419:20,812,702...20,878,599
JBrowse link
platelet activating factor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chpt1 choline phosphotransferase 1 involved_in ISO (PMID:10893425) UniProt PMID:10893425 NCBI chrNW_004955405:37,081,024...37,093,798 JBrowse link
G Lpcat2 lysophosphatidylcholine acyltransferase 2 involved_in ISO (MGI:3708195|PMID:17182612) UniProt PMID:17182612 MGI:3708195 NCBI chrNW_004955433:13,052,480...13,120,197
Ensembl chrNW_004955433:13,052,605...13,119,775
JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in ISO (MGI:1100762|PMID:9403692) UniProt PMID:9403692 MGI:1100762 NCBI chrNW_004955406:25,257,361...25,392,079
Ensembl chrNW_004955406:25,257,355...25,394,206
JBrowse link
G Pla2g4c phospholipase A2 group IVC involved_in ISO (PMID:19501189) UniProt PMID:19501189 NCBI chrNW_004955609:182,706...212,102 JBrowse link
G Pla2g5 phospholipase A2 group V ISO RGD PMID:11106649 RGD:2303037 NCBI chrNW_004955452:662,281...721,507
Ensembl chrNW_004955452:710,271...723,142
JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004955422:29,254,440...29,307,104
Ensembl chrNW_004955422:29,254,216...29,308,174
JBrowse link
G Eno1 enolase 1 involved_in ISO (PMID:15459207) CAFA PMID:15459207 NCBI chrNW_004955486:4,275,371...4,287,152
Ensembl chrNW_004955486:4,274,238...4,289,809
JBrowse link
G Il4 interleukin 4 involved_in ISO (MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:6304699 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004955450:9,181,851...9,205,277
Ensembl chrNW_004955450:9,181,851...9,239,648
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 ISO RGD PMID:26888427 RGD:11040458 NCBI chrNW_004955414:13,867,880...13,878,040 JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (MGI:5306739|PMID:21080215) BHF-UCL PMID:21080215 MGI:5306739 NCBI chrNW_004955453:5,680,418...5,913,236
Ensembl chrNW_004955453:5,680,211...5,911,589
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of ISO (PMID:31574452) ARUK-UCL PMID:31574452 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24096089 RGD:10413842 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:24747689) AgBase PMID:24747689 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004955449:3,093,603...3,182,513
Ensembl chrNW_004955449:3,093,603...3,186,737
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO RGD PMID:23590160 RGD:8694322 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase ISO RGD PMID:20348225 RGD:13432160 NCBI chrNW_004955580:915,668...921,703
Ensembl chrNW_004955580:915,188...922,791
JBrowse link
G Tmsb4x thymosin beta 4 X-linked involved_in ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004955544:266,397...268,447
Ensembl chrNW_004955544:266,397...268,447
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5906931|PMID:28802038) ARUK-UCL PMID:28802038 MGI:5906931 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697
JBrowse link
G Vcp valosin containing protein involved_in ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
JBrowse link
positive regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2b adenosine A2b receptor acts_upstream_of_or_within ISO (MGI:3794903|PMID:18340377) MGI PMID:18340377 MGI:3794903 NCBI chrNW_004955467:1,342,271...1,363,149
Ensembl chrNW_004955467:1,342,271...1,363,138
JBrowse link
G Guca1a guanylate cyclase activator 1A ISO RGD PMID:12545196 RGD:1599357 NCBI chrNW_004955437:8,370,553...8,382,640
Ensembl chrNW_004955437:8,376,091...8,382,640
JBrowse link
G Nos3 nitric oxide synthase 3 involved_in ISO (PMID:17502619) BHF-UCL PMID:17502619 NCBI chrNW_004955491:5,438,228...5,457,308
Ensembl chrNW_004955491:5,438,010...5,460,814
JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I ISO RGD PMID:8943280 RGD:2315982 NCBI chrNW_004955410:32,176,683...32,229,187
Ensembl chrNW_004955410:32,176,536...32,229,431
JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in ISO (PMID:9322919) ARUK-UCL PMID:9322919 NCBI chrNW_004955406:41,706,088...41,716,173
Ensembl chrNW_004955406:41,705,305...41,716,173
JBrowse link
G Cd244 CD244 molecule involved_in ISO (PMID:8376943) UniProt PMID:8376943 NCBI chrNW_004955468:12,532,937...12,559,859
Ensembl chrNW_004955468:12,534,064...12,559,434
JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:1332507 RGD:2316794 NCBI chrNW_004955439:20,956,862...20,957,839
Ensembl chrNW_004955439:20,956,862...20,957,839
JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:11861328 RGD:9743897 NCBI chrNW_004955528:1,348,616...1,394,798
Ensembl chrNW_004955528:1,348,555...1,394,868
JBrowse link
G Ptafr platelet activating factor receptor ISO RGD PMID:8798508 RGD:9999203 NCBI chrNW_004955452:7,309,854...7,345,579
Ensembl chrNW_004955452:7,311,901...7,312,929
JBrowse link
G Pth parathyroid hormone involved_in ISO (PMID:11604398) CAFA PMID:11604398 NCBI chrNW_004955414:28,828,389...28,831,417
Ensembl chrNW_004955414:28,825,651...28,831,117
JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in ISO PMID:19608645 BHF-UCL PMID:19608645 RGD:8553376 NCBI chrNW_004955420:25,274,269...25,291,984
Ensembl chrNW_004955420:25,273,431...25,296,471
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:15641770) UniProt PMID:15641770 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403
JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO (PMID:15705806) UniProt PMID:15705806 NCBI chrNW_004955460:8,790,798...8,794,902
Ensembl chrNW_004955460:8,790,798...8,794,902
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in ISO (MGI:5318037|PMID:10493819) BHF-UCL PMID:10493819 MGI:5318037 NCBI chrNW_004955441:15,205,883...15,263,617 JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chrNW_004955413:22,881,759...22,972,182
Ensembl chrNW_004955413:22,881,045...22,972,450
JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in ISO PMID:11390975 BHF-UCL PMID:11390975 RGD:8553380 NCBI chrNW_004955448:4,366,706...4,372,626
Ensembl chrNW_004955448:4,366,706...4,372,626
JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 involved_in ISO (PMID:8670200) ARUK-UCL PMID:8670200 NCBI chrNW_004955414:18,177,406...18,215,428
Ensembl chrNW_004955414:18,177,406...18,215,428
JBrowse link
G Plcd1 phospholipase C delta 1 ISO RGD PMID:16709602 RGD:2300424 NCBI chrNW_004955421:4,856,366...4,880,309
Ensembl chrNW_004955421:4,856,366...4,880,309
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (MGI:2135699|PMID:11371619) MGI PMID:11371619 MGI:2135699 NCBI chrNW_004955407:5,996,016...6,011,483
Ensembl chrNW_004955407:5,996,016...6,011,483
JBrowse link
positive regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (PMID:23767959) ParkinsonsUK-UCL PMID:23767959 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751
JBrowse link
positive regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl3 acyl-CoA synthetase long chain family member 3 involved_in ISO (PMID:18003621) UniProt PMID:18003621 NCBI chrNW_004955453:10,916,423...10,963,986
Ensembl chrNW_004955453:10,913,786...10,947,963
JBrowse link
G Capn2 calpain 2 ISO RGD PMID:9481489 RGD:13792658 NCBI chrNW_004955520:1,287,829...1,315,318
Ensembl chrNW_004955520:1,286,356...1,315,328
JBrowse link
G Rab38 RAB38, member RAS oncogene family ISO RGD PMID:28438206 RGD:13524861 NCBI chrNW_004955414:5,158,860...5,214,108
Ensembl chrNW_004955414:5,158,261...5,215,698
JBrowse link
positive regulation of phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htr2a 5-hydroxytryptamine receptor 2A involved_in ISO (PMID:19057895) UniProt PMID:19057895 NCBI chrNW_004955431:583,165...646,991
Ensembl chrNW_004955431:580,713...647,345
JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B involved_in ISO (PMID:19057895) UniProt PMID:19057895 NCBI chrNW_004955453:4,352,278...4,367,807
Ensembl chrNW_004955453:4,351,668...4,367,807
JBrowse link
G Htr2c 5-hydroxytryptamine receptor 2C involved_in ISO (PMID:19057895) UniProt PMID:19057895 NCBI chrNW_004955490:912,615...1,126,347
Ensembl chrNW_004955490:910,415...1,126,373
JBrowse link
positive regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrf5 adhesion G protein-coupled receptor F5 acts_upstream_of_or_within ISO (MGI:5641462|PMID:23590306) MGI PMID:23590306 MGI:5641462 NCBI chrNW_004955437:11,639,555...11,710,362
Ensembl chrNW_004955437:11,639,891...11,688,257
JBrowse link
G Chp1 calcineurin like EF-hand protein 1 involved_in ISO (PMID:30846317) FlyBase PMID:30846317 NCBI chrNW_004955416:8,090,034...8,131,605
Ensembl chrNW_004955416:8,090,034...8,132,870
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:19191103 RGD:126790485 NCBI chrNW_004955457:3,177,905...4,236,152
Ensembl chrNW_004955457:3,177,991...4,228,558
JBrowse link
G Pc pyruvate carboxylase involved_in ISO PMID:23357280 CACAO PMID:23357280 RGD:10047307 NCBI chrNW_004955422:18,421,100...18,536,591
Ensembl chrNW_004955422:18,420,596...18,536,436
JBrowse link
propionyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004955412:10,350,088...10,369,806
Ensembl chrNW_004955412:10,349,593...10,369,806
JBrowse link
purine nucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss2 adenylosuccinate synthase 2 acts_upstream_of_or_within ISO (MGI:2451213|PMID:12482871) MGI PMID:12482871 MGI:2451213 NCBI chrNW_004955406:7,684,979...7,715,179
Ensembl chrNW_004955406:7,683,596...7,715,616
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (PMID:9824441) UniProt PMID:9824441 NCBI chrNW_004955473:462,940...510,006 JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 acts_upstream_of_or_within ISO (MGI:2675193|PMID:12944494) MGI PMID:12944494 MGI:2675193 NCBI chrNW_004955479:9,388,241...9,406,717
Ensembl chrNW_004955479:9,388,108...9,406,764
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 acts_upstream_of_or_within ISO (MGI:2675193|PMID:12944494) RGD
MGI
PMID:2897864 PMID:12944494 MGI:2675193 RGD:5147398 NCBI chrNW_004955532:1,047,138...1,051,980
Ensembl chrNW_004955532:1,045,833...1,051,978
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (MGI:5503248|PMID:23704330) BHF-UCL PMID:23704330 MGI:5503248 NCBI chrNW_004955466:5,422,141...5,485,773
Ensembl chrNW_004955466:5,420,702...5,485,773
JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 involved_in ISO (PMID:12847698) UniProt PMID:12847698 NCBI chrNW_004955490:8,303,775...8,330,713 JBrowse link
purine nucleotide salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (PMID:9361033) UniProt PMID:9361033 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488
JBrowse link
purine ribonucleoside monophosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss1 adenylosuccinate synthase 1 ISO RGD PMID:3759987 RGD:5135303 NCBI chrNW_004955538:3,179,299...3,196,251
Ensembl chrNW_004955538:3,179,299...3,196,251
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:8463258 RGD:633710 NCBI chrNW_004955447:14,552,846...14,607,416
Ensembl chrNW_004955447:14,574,407...14,607,416
JBrowse link
pyridoxal phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdxk pyridoxal kinase ISO RGD PMID:2988502 RGD:2303018 NCBI chrNW_004955407:41,482,216...41,494,174
Ensembl chrNW_004955407:41,482,216...41,494,177
JBrowse link
G Pnpo pyridoxamine 5'-phosphate oxidase involved_in ISO (PMID:12824491) CAFA PMID:12824491 NCBI chrNW_004955451:13,184,861...13,190,933
Ensembl chrNW_004955451:13,183,826...13,191,707
JBrowse link
regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in ISO (MGI:5487511|PMID:22195962) UniProt PMID:22195962 MGI:5487511 NCBI chrNW_004955449:2,546,790...2,582,402
Ensembl chrNW_004955449:2,549,139...2,582,243
JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISO (MGI:5428826|PMID:22360721) UniProt PMID:22360721 MGI:5428826 NCBI chrNW_004955451:11,547,660...11,559,266
Ensembl chrNW_004955451:11,547,660...11,559,403
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in ISO (PMID:22865452) UniProt PMID:22865452 NCBI chrNW_004955509:4,809,422...4,888,802
Ensembl chrNW_004955509:4,809,399...4,878,976
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISO (PMID:21852536)
(MGI:3692363|PMID:16606348)
UniProt PMID:16606348 PMID:21852536 MGI:3692363 NCBI chrNW_004955432:12,169,548...12,182,064
Ensembl chrNW_004955432:12,169,435...12,182,409
JBrowse link
regulation of acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snca synuclein alpha acts_upstream_of_or_within ISO (MGI:3629421|PMID:16734431)
(MGI:3628986|PMID:16636270)
MGI PMID:16636270 PMID:16734431 MGI:3628986 MGI:3629421 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403
JBrowse link
regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak4 adenylate kinase 4 involved_in ISO (PMID:24767988) UniProt PMID:24767988 NCBI chrNW_004955423:25,395,086...25,402,324
Ensembl chrNW_004955423:25,395,836...25,427,474
JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO (MGI:5641585|PMID:25637806) UniProt PMID:25637806 MGI:5641585 NCBI chrNW_004955559:1,921,479...1,929,450
Ensembl chrNW_004955559:1,917,301...1,928,493
JBrowse link
regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guca1b guanylate cyclase activator 1B acts_upstream_of_or_within ISO (MGI:3052899|PMID:15336959) MGI PMID:15336959 MGI:3052899 NCBI chrNW_004955437:8,384,692...8,390,946
Ensembl chrNW_004955437:8,382,299...8,390,946
JBrowse link
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (MGI:3583523|PMID:12960403) UniProt PMID:12960403 MGI:3583523 NCBI chrNW_004955403:49,856,056...49,970,800
Ensembl chrNW_004955403:49,855,541...49,973,225
JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase involved_in ISO (PMID:30530489)
(MGI:6277238|PMID:30530489)
UniProt PMID:30530489 MGI:6277238 NCBI chrNW_004955426:116,223...131,798
Ensembl chrNW_004955426:116,514...126,244
JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in ISO (MGI:6245118|PMID:30318146) UniProt PMID:30318146 MGI:6245118 NCBI chrNW_004955456:14,057,517...14,058,729
Ensembl chrNW_004955456:14,057,620...14,058,303
JBrowse link
regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO (MGI:5904930|PMID:27806294) MGI PMID:27806294 MGI:5904930 NCBI chrNW_004955599:505,725...514,225
Ensembl chrNW_004955599:507,501...514,151
JBrowse link
regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp3 fatty acid binding protein 3 acts_upstream_of_or_within ISO (MGI:3045488|PMID:15164767) MGI PMID:15164767 MGI:3045488 NCBI chrNW_004955452:9,851,182...9,858,735
Ensembl chrNW_004955452:9,846,689...9,861,971
JBrowse link
regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 acts_upstream_of_or_within ISO (MGI:5605608|PMID:25218477) MGI PMID:25218477 MGI:5605608 NCBI chrNW_004955457:6,851,542...6,869,452
Ensembl chrNW_004955457:6,851,517...6,872,367
JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (MGI:6467919|PMID:11003606) UniProt PMID:11003606 MGI:6467919 NCBI chrNW_004955464:6,097,241...6,224,287
Ensembl chrNW_004955464:6,094,758...6,224,287
JBrowse link
ribonucleoside monophosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase ISO AICAR RGD PMID:3759987 RGD:5135303 NCBI chrNW_004955413:26,067,463...26,084,669
Ensembl chrNW_004955413:26,067,516...26,088,527
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:4027981 RGD:5135261 NCBI chrNW_004955407:32,944,638...32,975,142
Ensembl chrNW_004955407:32,944,164...32,973,863
JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase ISO RGD PMID:6722784 RGD:5135276 NCBI chrNW_004955467:8,640,044...8,660,950
Ensembl chrNW_004955467:8,640,044...8,660,979
JBrowse link
ribose phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G6pd glucose-6-phosphate dehydrogenase involved_in ISO (PMID:2420826) BHF-UCL PMID:2420826 NCBI chrNW_004955580:1,045,294...1,058,129
Ensembl chrNW_004955580:1,045,294...1,057,083
JBrowse link
G Tkt transketolase ISO RGD PMID:16116031 RGD:1580394 NCBI chrNW_004955430:3,178,830...3,193,241
Ensembl chrNW_004955430:3,178,830...3,193,345
JBrowse link
sphinganine-1-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sphk2 sphingosine kinase 2 involved_in ISO (PMID:10751414), (PMID:19729656)
(MGI:1860308|PMID:10751414)
UniProt PMID:10751414 PMID:19729656 MGI:1860308 NCBI chrNW_004955559:1,921,479...1,929,450
Ensembl chrNW_004955559:1,917,301...1,928,493
JBrowse link
sphingomyelin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 acts_upstream_of ISO (MGI:6393026|PMID:31880535) MGI PMID:31880535 MGI:6393026 NCBI chrNW_004955403:9,100,516...9,113,230 JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of ISO (MGI:6393026|PMID:31880535) MGI PMID:31880535 MGI:6393026 NCBI chrNW_004955451:14,621,565...14,627,556
Ensembl chrNW_004955451:14,621,399...14,642,763
JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase acts_upstream_of_or_within ISO (MGI:5707904|PMID:25667419) MGI PMID:25667419 MGI:5707904 NCBI chrNW_004955577:365,031...443,138
Ensembl chrNW_004955577:367,288...443,138
JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in ISO (PMID:14685263), (PMID:14976195), (PMID:17982138)
(MGI:6221394|PMID:27892528)
HGNC-UCL
UniProt
PMID:14685263 PMID:14976195 PMID:17982138 PMID:27892528 MGI:6221394 NCBI chrNW_004955425:5,507,905...5,819,357
Ensembl chrNW_004955425:5,784,751...5,822,488
JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:14685263), (PMID:17982138)
(MGI:6221394|PMID:27892528)
(MGI:5707904|PMID:25667419)
UniProt
MGI
PMID:14685263 PMID:17982138 PMID:25667419 PMID:27892528 MGI:5707904 MGI:6221394 NCBI chrNW_004955496:1,909,347...1,955,004
Ensembl chrNW_004955496:1,905,517...1,947,009
JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in
ISO (MGI:3814228|PMID:16216550)
(MGI:5749304|PMID:26301690)
MGI
UniProt
PMID:16216550 PMID:26301690 MGI:3814228 MGI:5749304 NCBI chrNW_004955515:57,711...161,012
Ensembl chrNW_004955515:57,711...161,611
JBrowse link
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within ISO (MGI:3814228|PMID:16216550) MGI PMID:16216550 MGI:3814228 NCBI chrNW_004955438:1,385,431...1,491,534
Ensembl chrNW_004955438:1,385,431...1,491,578
JBrowse link
UDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chrNW_004955464:11,179,432...11,213,147 JBrowse link
UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Umps uridine monophosphate synthetase involved_in ISO (PMID:11730338), (PMID:6893554) RGD
UniProt
PMID:6134725 PMID:6893554 PMID:11730338 RGD:5132277 NCBI chrNW_004955427:23,825,529...23,841,427
Ensembl chrNW_004955427:23,825,523...23,841,152
JBrowse link
G Uprt uracil phosphoribosyltransferase homolog ISO RGD PMID:1476792 RGD:5132591 NCBI chrNW_004955562:1,385,617...1,415,277
Ensembl chrNW_004955562:1,385,611...1,415,336
JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:10659854 RGD:2303528 NCBI chrNW_004955469:9,203,433...9,227,526
Ensembl chrNW_004955469:9,203,434...9,227,865
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11938
    metabolic process 7522
      organic substance metabolic process 7252
        organophosphate metabolic process 637
          organophosphate biosynthetic process 336
            1-deoxy-D-xylulose 5-phosphate biosynthetic process 0
            7,8-dihydroneopterin 3'-triphosphate biosynthetic process 0
            D-glycero-D-manno-heptose 7-phosphate biosynthetic process 0
            Mo-molybdopterin cofactor biosynthetic process + 4
            O3-(N-acetylglucosamine-1-phosphoryl)-L-serine biosynthetic process 0
            W-molybdopterin cofactor biosynthetic process 0
            carbamoyl phosphate biosynthetic process 1
            coenzyme gamma-F420-2 biosynthetic process 0
            cyclic 2,3-bisphospho-D-glycerate biosynthetic process 0
            deoxyribose phosphate biosynthetic process + 9
            glyceraldehyde-3-phosphate biosynthetic process 2
            glycerol-3-phosphate biosynthetic process 1
            inositol phosphate biosynthetic process + 25
            methanopterin-containing compound biosynthetic process + 0
            molybdopterin cofactor biosynthetic process 2
            nucleoside phosphate biosynthetic process + 158
            organic phosphonate biosynthetic process 0
            phosphagen biosynthetic process + 1
            phospholipid biosynthetic process + 149
            psilocybin biosynthetic process 0
            pyridoxal phosphate biosynthetic process + 2
            ribose phosphate biosynthetic process + 118
            thiamine diphosphate biosynthetic process + 0
            xylulose 5-phosphate biosynthetic process + 0
Path 2
Term Annotations click to browse term
  biological_process 11938
    cellular process 11169
      cellular metabolic process 6921
        phosphorus metabolic process 2065
          organophosphate metabolic process 637
            organophosphate biosynthetic process 336
              1-deoxy-D-xylulose 5-phosphate biosynthetic process 0
              7,8-dihydroneopterin 3'-triphosphate biosynthetic process 0
              D-glycero-D-manno-heptose 7-phosphate biosynthetic process 0
              Mo-molybdopterin cofactor biosynthetic process + 4
              O3-(N-acetylglucosamine-1-phosphoryl)-L-serine biosynthetic process 0
              W-molybdopterin cofactor biosynthetic process 0
              carbamoyl phosphate biosynthetic process 1
              coenzyme gamma-F420-2 biosynthetic process 0
              cyclic 2,3-bisphospho-D-glycerate biosynthetic process 0
              deoxyribose phosphate biosynthetic process + 9
              glyceraldehyde-3-phosphate biosynthetic process 2
              glycerol-3-phosphate biosynthetic process 1
              inositol phosphate biosynthetic process + 25
              methanopterin-containing compound biosynthetic process + 0
              molybdopterin cofactor biosynthetic process 2
              nucleoside phosphate biosynthetic process + 158
              organic phosphonate biosynthetic process 0
              phosphagen biosynthetic process + 1
              phospholipid biosynthetic process + 149
              psilocybin biosynthetic process 0
              pyridoxal phosphate biosynthetic process + 2
              ribose phosphate biosynthetic process + 118
              thiamine diphosphate biosynthetic process + 0
              xylulose 5-phosphate biosynthetic process + 0
paths to the root