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ONTOLOGY REPORT - ANNOTATIONS

Term:phagosome acidification
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Accession:GO:0090383 term browser browse the term
Definition:Any process that reduces the pH of the phagosome, measured by the concentration of the hydrogen ion.
Synonyms:exact_synonym: phagosomal acidification

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phagosome acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab20 RAB20, member RAS oncogene family involved_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955404:2,087,580...2,088,545 JBrowse link
G Rab38 RAB38, member RAS oncogene family involved_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955414:5,158,860...5,214,108
Ensembl chrNW_004955414:5,158,261...5,215,698 		JBrowse link
G Rab39a RAB39A, member RAS oncogene family involved_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955412:10,224,074...10,240,270
Ensembl chrNW_004955412:10,224,074...10,240,270 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955429:15,103,792...15,167,498 JBrowse link
G Slamf8 SLAM family member 8 acts_upstream_of_or_within ISO (PMID:22593622) MGI PMID:22593622 NCBI chrNW_004955468:11,623,092...11,632,566
Ensembl chrNW_004955468:11,623,197...11,632,573 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in ISO (PMID:29779931) UniProt PMID:29779931 NCBI chrNW_004955430:18,991,615...19,059,590
Ensembl chrNW_004955430:18,991,301...19,067,754 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within ISO (PMID:19549681) MGI PMID:19549681 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12346
    biological regulation 8880
      regulation of biological quality 2623
        regulation of intracellular pH 65
          intracellular pH reduction 38
            phagosome acidification 7
              phagosome acidification involved in apoptotic cell clearance 0
Path 2
Term Annotations click to browse term
  biological_process 12346
    homeostatic process 1655
      chemical homeostasis 974
        monoatomic ion homeostasis 529
          monoatomic cation homeostasis 517
            regulation of pH 88
              regulation of cellular pH 71
                regulation of intracellular pH 65
                  intracellular pH reduction 38
                    phagosome acidification 7
                      phagosome acidification involved in apoptotic cell clearance 0
paths to the root