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ONTOLOGY REPORT - ANNOTATIONS


Term:phagosome acidification
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Accession:GO:0090383 term browser browse the term
Definition:Any process that reduces the pH of the phagosome, measured by the concentration of the hydrogen ion.
Synonyms:exact_synonym: phagosomal acidification



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phagosome acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab20 RAB20, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr16:78,019,337...78,043,529
Ensembl chr16:78,019,337...78,043,529
JBrowse link
G Rab38 RAB38, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr 1:142,182,566...142,262,923
Ensembl chr 1:142,182,556...142,262,924
JBrowse link
G Rab39a RAB39A, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr 8:54,088,246...54,105,867
Ensembl chr 8:54,088,129...54,106,483
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO
ISS
(PMID:21255211)
GO_REF:0000024
RGD
UniProt
PMID:21255211 GO_REF:0000024 NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
G Slamf8 SLAM family member 8 acts_upstream_of_or_within ISO MGI:5442794 (PMID:22593622) RGD PMID:22593622 NCBI chr13:85,047,729...85,057,571
Ensembl chr13:85,047,727...85,057,211
JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in ISO (PMID:29779931) RGD PMID:29779931 NCBI chr15:10,585,307...10,664,780
Ensembl chr15:10,588,979...10,664,781
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:3852642 (PMID:19549681) RGD PMID:19549681 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20115
    biological regulation 13554
      regulation of biological quality 3385
        regulation of intracellular pH 82
          intracellular pH reduction 47
            phagosome acidification 7
              phagosome acidification involved in apoptotic cell clearance 0
Path 2
Term Annotations click to browse term
  biological_process 20115
    homeostatic process 1973
      chemical homeostasis 1206
        monoatomic ion homeostasis 668
          monoatomic cation homeostasis 656
            regulation of pH 106
              regulation of cellular pH 91
                regulation of intracellular pH 82
                  intracellular pH reduction 47
                    phagosome acidification 7
                      phagosome acidification involved in apoptotic cell clearance 0
paths to the root