Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of superoxide metabolic process
go back to main search page
Accession:GO:0090322 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of superoxide metabolism, the chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species.
Synonyms:exact_synonym: regulation of superoxide metabolism


show annotations for term's descendants           Sort by:
regulation of superoxide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir27b microRNA 27b involved_in ISO (PMID:24177325) BHF-UCL PMID:24177325 NCBI chr13:63,448,526...63,448,598
Ensembl chr13:63,448,526...63,448,598 		JBrowse link
G Shc1 src homology 2 domain-containing transforming protein C1 involved_in ISO MGI
GO_Central		 GO_REF:0000119 MGI:4834177 NCBI chr 3:89,325,858...89,337,336
Ensembl chr 3:89,325,750...89,337,334 		JBrowse link
negative regulation of superoxide anion generation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatf apoptosis antagonizing transcription factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:84,313,682...84,404,433
Ensembl chr11:84,313,681...84,404,348 		JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant acts_upstream_of_or_within IMP (PMID:11168643) MGI PMID:11168643 NCBI chr 9:22,038,023...22,047,042
Ensembl chr 9:22,038,023...22,047,007 		JBrowse link
G Akt1 thymoma viral proto-oncogene 1 involved_in ISO RGD
MGI		 PMID:24601882 GO_REF:0000096 MGI:4417868 RGD:39128160 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
G Crp C-reactive protein, pentraxin-related involved_in ISO RGD
GO_Central
MGI		 PMID:9767445 GO_REF:0000096 MGI:4417868 RGD:9586000 NCBI chr 1:172,525,623...172,527,533
Ensembl chr 1:172,525,622...172,660,598 		JBrowse link
G Pon3 paraoxonase 3 involved_in IDA (MGI:5543365|PMID:22441669)
(PMID:22441669)		 CACAO PMID:22441669 MGI:5543365 NCBI chr 6:5,216,253...5,256,236
Ensembl chr 6:5,220,852...5,256,286 		JBrowse link
positive regulation of superoxide anion generation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in ISO RGD
MGI
GO_Central		 PMID:21376054 GO_REF:0000096 MGI:4417868 RGD:5129173 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Agtr1a angiotensin II receptor, type 1a involved_in ISO RGD
GO_Central
MGI		 PMID:21076237 GO_REF:0000096 MGI:4417868 RGD:5129195 NCBI chr13:30,520,339...30,566,850
Ensembl chr13:30,520,424...30,566,850 		JBrowse link
G App amyloid beta precursor protein involved_in ISO MGI
GO_Central		 GO_REF:0000119 MGI:4834177 NCBI chr16:84,751,236...84,972,187
Ensembl chr16:84,746,573...84,970,654 		JBrowse link
G Cd177 CD177 antigen involved_in ISO MGI
GO_Central		 GO_REF:0000119 MGI:4834177 NCBI chr 7:24,443,408...24,459,759
Ensembl chr 7:24,443,408...24,459,736 		JBrowse link
G Clec7a C-type lectin domain family 7, member a involved_in ISO MGI
GO_Central		 GO_REF:0000119 MGI:4834177 NCBI chr 6:129,438,554...129,449,748
Ensembl chr 6:129,438,554...129,449,742 		JBrowse link
G Crp C-reactive protein, pentraxin-related involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:172,525,623...172,527,533
Ensembl chr 1:172,525,622...172,660,598 		JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 involved_in IDA (MGI:5586806|PMID:10725737)
(PMID:10725737)		 UniProt PMID:10725737 MGI:5586806 NCBI chr 5:91,039,104...91,040,980
Ensembl chr 5:91,039,100...91,040,974 		JBrowse link
G Cyba cytochrome b-245, alpha polypeptide involved_in ISO RGD
GO_Central
MGI		 PMID:15036821 GO_REF:0000096 MGI:4417868 RGD:8693734 NCBI chr 8:123,151,510...123,159,679
Ensembl chr 8:123,151,515...123,159,669 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO RGD
GO_Central
MGI		 PMID:22966991 GO_REF:0000096 MGI:4417868 RGD:7204494 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISO
IEA		 RGD
Ensembl
GO_Central
MGI		 PMID:26682942 GO_REF:0000096 GO_REF:0000107 MGI:4417868 RGD:329961560 NCBI chr 8:4,334,781...4,375,104
Ensembl chr 8:4,335,382...4,375,413 		JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO MGI
GO_Central		 GO_REF:0000119 MGI:4834177 NCBI chr13:95,648,226...95,661,748
Ensembl chr13:95,648,240...95,661,735 		JBrowse link
G Fpr2 formyl peptide receptor 2 involved_in IGI (MGI:5905278|PMID:11316806)
(PMID:11316806)		 ARUK-UCL PMID:11316806 MGI:5905278 NCBI chr17:18,108,086...18,114,214
Ensembl chr17:18,108,086...18,114,214 		JBrowse link
G Gnai2 G protein subunit alpha i2 involved_in ISO
IEA		 RGD
Ensembl
GO_Central
MGI		 PMID:27912212 GO_REF:0000096 GO_REF:0000107 MGI:4417868 RGD:13507308 NCBI chr 9:107,491,324...107,512,542
Ensembl chr 9:107,491,324...107,512,566 		JBrowse link
G Gnai3 G protein subunit alpha i3 involved_in ISO RGD
GO_Central
MGI		 PMID:27912212 GO_REF:0000096 MGI:4417868 RGD:13507308 NCBI chr 3:108,014,591...108,053,468
Ensembl chr 3:108,014,596...108,053,462 		JBrowse link
G Gstp1 glutathione S-transferase, pi 1 involved_in IMP (MGI:5009187|PMID:11408560) BHF-UCL PMID:11408560 MGI:5009187 NCBI chr19:4,085,411...4,087,912
Ensembl chr19:4,085,407...4,087,985 		JBrowse link
G Hvcn1 hydrogen voltage-gated channel 1 involved_in ISO
IEA		 RGD
GO_Central
Ensembl
MGI		 PMID:24935944 GO_REF:0000096 GO_REF:0000107 MGI:4417868 RGD:14985214 NCBI chr 5:122,344,872...122,380,360
Ensembl chr 5:122,344,867...122,380,360 		JBrowse link
G Il18 interleukin 18 involved_in ISO RGD
GO_Central
MGI		 PMID:19497959 GO_REF:0000096 MGI:4417868 RGD:4889403 NCBI chr 9:50,466,000...50,493,141
Ensembl chr 9:50,466,127...50,493,140 		JBrowse link
G Itgam integrin alpha M involved_in IMP
IDA
ISO		 (MGI:3814938|PMID:18981141)
(PMID:18685038)
(PMID:18981141)
(MGI:3812233|PMID:18685038)		 ARUK-UCL
GO_Central
MGI		 PMID:18685038 PMID:18981141 GO_REF:0000119 MGI:3812233 MGI:3814938 MGI:4834177 NCBI chr 7:127,661,812...127,717,663
Ensembl chr 7:127,661,812...127,717,663 		JBrowse link
G Itgb2 integrin beta 2 involved_in ISO MGI
GO_Central		 GO_REF:0000119 MGI:4834177 NCBI chr10:77,366,164...77,401,542
Ensembl chr10:77,366,086...77,401,542 		JBrowse link
G Itgb2l integrin beta 2-like involved_in ISO MGI
GO_Central		 GO_REF:0000119 MGI:4834177 NCBI chr16:96,223,488...96,244,861
Ensembl chr16:96,223,488...96,244,819 		JBrowse link
G Mapt microtubule-associated protein tau involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:104,120,235...104,222,916
Ensembl chr11:104,122,216...104,222,916 		JBrowse link
G Nox1 NADPH oxidase 1 involved_in ISO RGD
MGI		 PMID:24294978 PMID:26682942 GO_REF:0000096 MGI:4417868 RGD:329955573 RGD:329961560 NCBI chr  X:132,987,170...133,038,455
Ensembl chr  X:132,987,170...133,122,705 		JBrowse link
G Olr1 oxidized low density lipoprotein (lectin-like) receptor 1 involved_in ISO (PMID:24141169) AgBase PMID:24141169 NCBI chr 6:129,456,113...129,484,312
Ensembl chr 6:129,462,207...129,484,128 		JBrowse link
G Prkcd protein kinase C, delta involved_in ISO
ISS		 MGI
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr14:30,317,310...30,348,637
Ensembl chr14:30,317,311...30,348,167 		JBrowse link
G Sod1 superoxide dismutase 1, soluble involved_in ISO
IEA		 MGI
Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr16:90,017,650...90,023,221
Ensembl chr16:90,017,642...90,023,217 		JBrowse link
G Syk spleen tyrosine kinase involved_in ISO
IEA		 MGI
Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr13:52,736,670...52,802,828
Ensembl chr13:52,737,209...52,802,828 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tyrobp TYRO protein tyrosine kinase binding protein involved_in IDA (MGI:3812233|PMID:18685038) ARUK-UCL PMID:18685038 MGI:3812233 NCBI chr 7:30,113,207...30,117,007
Ensembl chr 7:30,113,185...30,117,010 		JBrowse link
regulation of removal of superoxide radicals term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule involved_in IMP (MGI:4850200|PMID:20978343)
(PMID:20978343)		 BHF-UCL PMID:20978343 MGI:4850200 NCBI chr 5:17,986,680...18,093,828
Ensembl chr 5:17,986,688...18,093,799 		JBrowse link
G Dhfr dihydrofolate reductase involved_in IMP (MGI:5645206|PMID:19666465)
(PMID:19666465)		 BHF-UCL PMID:19666465 MGI:5645206 NCBI chr13:92,491,291...92,525,561
Ensembl chr13:92,491,234...92,525,561 		JBrowse link
G Fbln5 fibulin 5 involved_in IMP (MGI:3610795|PMID:15528465)
(PMID:15528465)		 BHF-UCL PMID:15528465 MGI:3610795 NCBI chr12:101,712,820...101,785,541
Ensembl chr12:101,712,824...101,785,314 		JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in ISO
IEA		 MGI
Ensembl		 GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr14:47,391,352...47,426,870
Ensembl chr14:47,391,352...47,426,870 		JBrowse link
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 involved_in IMP (MGI:4850200|PMID:20978343) BHF-UCL PMID:20978343 MGI:4850200 NCBI chr 2:75,505,860...75,535,007
Ensembl chr 2:75,505,857...75,534,985 		JBrowse link
regulation of superoxide anion generation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syk spleen tyrosine kinase involved_in IMP (MGI:4414596|PMID:19797524)
(PMID:19797524)		 UniProt PMID:19797524 MGI:4414596 NCBI chr13:52,736,670...52,802,828
Ensembl chr13:52,737,209...52,802,828 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28760
    cellular process 18484
      metabolic process 11916
        reactive oxygen species metabolic process 285
          superoxide metabolic process 76
            regulation of superoxide metabolic process 39
              regulation of removal of superoxide radicals + 5
              regulation of superoxide anion generation + 32
Path 2
Term Annotations click to browse term
  biological_process 28760
    biological regulation 13523
      regulation of biological process 13091
        regulation of cellular process 12712
          regulation of metabolic process 7156
            regulation of reactive oxygen species metabolic process 187
              regulation of superoxide metabolic process 39
                regulation of removal of superoxide radicals + 5
                regulation of superoxide anion generation + 32
paths to the root