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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of protein deacetylation
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Accession:GO:0090312 term browser browse the term
Definition:Any process that increases the rate, frequency, or extent of protein deacetylation, the removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.
Synonyms:exact_synonym: positive regulation of protein amino acid deacetylation


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positive regulation of protein deacetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brms1 BRMS1, transcriptional repressor and anoikis regulator involved_in ISO
ISS
(PMID:17000776)
GO_REF:0000024
RGD
UniProt
PMID:17000776 GO_REF:0000024 NCBI chr 1:220,325,352...220,334,616
Ensembl chr 1:220,325,352...220,334,615
Ensembl chr 1:220,325,352...220,334,615
Ensembl chr 1:220,325,352...220,334,615
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISO (MGI:5318016|PMID:20736167) RGD PMID:20736167 MGI:5318016 NCBI chr11:34,858,339...34,958,733
Ensembl chr11:34,865,532...34,956,536
JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:23629966)
(MGI:5490676|PMID:23629966)
RGD PMID:23629966 MGI:5490676 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within ISO (MGI:3699018|PMID:17158926) RGD PMID:17158926 MGI:3699018 NCBI chr12:36,871,917...37,033,701
Ensembl chr12:36,871,999...37,033,701
JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within ISO MGI:3586988 (MGI:5424047|PMID:22514318) RGD PMID:22514318 MGI:5424047 NCBI chr 1:122,981,755...122,983,354
Ensembl chr 1:122,981,755...122,983,351
JBrowse link
G Nnmt nicotinamide N-methyltransferase involved_in IEA
ISO
GO_REF:0000107
(MGI:5708799|PMID:26168293)
Ensembl
RGD
PMID:26168293 GO_REF:0000107 MGI:5708799 NCBI chr 8:52,918,437...52,938,172
Ensembl chr 8:52,925,175...52,937,972
JBrowse link
G Ripk3 receptor-interacting serine-threonine kinase 3 acts_upstream_of_or_within ISO MGI:1927664 (MGI:5471176|PMID:23201684) RGD PMID:23201684 MGI:5471176 NCBI chr15:34,470,796...34,479,741
Ensembl chr15:34,470,796...34,479,741
JBrowse link
G Sirt1 sirtuin 1 IMP RGD PMID:19470756 RGD:8553699 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
positive regulation of histone deacetylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine-rich repeat kinase 2 acts_upstream_of_or_within ISO (MGI:5902654|PMID:27798112) RGD PMID:27798112 MGI:5902654 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Pink1 PTEN induced kinase 1 acts_upstream_of_or_within ISO (MGI:5617128|PMID:25305081) RGD PMID:25305081 MGI:5617128 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
G Prkd1 protein kinase D1 involved_in ISO UniProtKB:Q9BZL6 (PMID:20497126) RGD PMID:20497126 NCBI chr 6:71,035,017...71,349,531
Ensembl chr 6:71,035,332...71,349,249
JBrowse link
G Prkd2 protein kinase D2 involved_in ISO UniProtKB:Q15139 (PMID:20497126) RGD PMID:20497126 NCBI chr 1:78,767,911...78,796,223
Ensembl chr 1:78,767,911...78,796,231
JBrowse link
G RGD735065 similar to GI:13385412-like protein splice form I involved_in ISO
IBA
ISS
(PMID:23460338)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23460338, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:6,869,870...6,910,022
Ensembl chr20:6,869,767...6,905,194
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:20497126) RGD PMID:20497126 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
positive regulation of histone deacetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8 A-kinase anchoring protein 8 involved_in ISO (PMID:16980585) RGD PMID:16980585 NCBI chr 7:14,323,298...14,339,953
Ensembl chr 7:14,324,104...14,351,918
JBrowse link
G Akap8l A-kinase anchoring protein 8 like involved_in ISO (PMID:16980585) RGD PMID:16980585 NCBI chr 7:14,340,168...14,369,835
Ensembl chr 7:14,340,170...14,369,821
JBrowse link
G Aplnr apelin receptor acts_upstream_of ISO (MGI:5584055|PMID:23603510) RGD PMID:23603510 MGI:5584055 NCBI chr 3:72,540,538...72,544,183
Ensembl chr 3:72,540,538...72,544,182
JBrowse link
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:2135607 (MGI:5493185|PMID:23160044) RGD PMID:23160044 MGI:5493185 NCBI chr11:80,255,790...80,279,075
Ensembl chr11:80,255,790...80,279,075
JBrowse link
G Ctbp1 C-terminal binding protein 1 involved_in ISO
IEA
(PMID:21102443)
GO_REF:0000107
RGD
Ensembl
PMID:21102443 GO_REF:0000107 NCBI chr14:82,762,109...82,789,350
Ensembl chr14:82,762,190...82,789,319
JBrowse link
G Ing2 inhibitor of growth family, member 2 involved_in ISO (MGI:4867787|PMID:21124965) RGD PMID:21124965 MGI:4867787 NCBI chr16:47,714,756...47,725,836
Ensembl chr16:47,717,951...47,725,836
JBrowse link
G Jdp2 Jun dimerization protein 2 acts_upstream_of_or_within ISO MGI:1343091 (MGI:3807603|PMID:17464331) RGD PMID:17464331 MGI:3807603 NCBI chr 6:109,464,910...109,505,591
Ensembl chr 6:109,466,060...109,505,161
JBrowse link
G Lpin1 lipin 1 acts_upstream_of_or_within ISO (MGI:4819323|PMID:20385772) RGD PMID:20385772 MGI:4819323 NCBI chr 6:41,796,214...41,905,149
Ensembl chr 6:41,799,749...41,870,046
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 acts_upstream_of_or_within ISO (MGI:3821398|PMID:19037247) RGD PMID:19037247 MGI:3821398 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:18854353) RGD PMID:18854353 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:11259576) RGD PMID:11259576 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Sap30bp SAP30 binding protein involved_in ISO (PMID:21221920) RGD PMID:21221920 NCBI chr10:104,483,011...104,514,513
Ensembl chr10:104,483,042...104,515,684
JBrowse link
G Sdr16c5 short chain dehydrogenase/reductase family 16C, member 5 involved_in ISO (PMID:16691198) RGD PMID:16691198 NCBI chr 5:16,904,926...16,930,111
Ensembl chr 5:16,904,926...16,930,075
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 acts_upstream_of_or_within ISO (MGI:3760208|PMID:17636037) RGD PMID:17636037 MGI:3760208 NCBI chr10:46,570,996...46,593,021
Ensembl chr10:46,570,996...46,593,009
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (MGI:3528807|PMID:15657445), (MGI:3584056|PMID:15990875) RGD PMID:15657445 PMID:15990875 MGI:3528807 MGI:3584056 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:3528807|PMID:15657445) RGD PMID:15657445 MGI:3528807 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (MGI:5446998|PMID:22730529) RGD PMID:22730529 MGI:5446998 NCBI chr 2:188,704,989...188,719,674
Ensembl chr 2:188,704,687...188,718,704
JBrowse link
positive regulation of tubulin deacetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fnta farnesyltransferase, CAAX box, alpha involved_in ISO
IEA
(PMID:19228685)
GO_REF:0000107
RGD
Ensembl
PMID:19228685 GO_REF:0000107 NCBI chr16:70,834,957...70,854,724
Ensembl chr16:70,834,957...70,854,724
JBrowse link
G Hdac6 histone deacetylase 6 IMP RGD PMID:24464872 RGD:9681552 NCBI chr  X:15,396,185...15,417,486
Ensembl chr  X:15,295,473...15,316,671
Ensembl chr  X:15,295,473...15,316,671
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    cellular process 18344
      positive regulation of cellular process 6067
        positive regulation of cellular metabolic process 3343
          positive regulation of cellular protein metabolic process 1460
            positive regulation of protein modification process 1054
              positive regulation of protein deacetylation 33
                positive regulation of histone deacetylation + 23
                positive regulation of tubulin deacetylation + 2
Path 2
Term Annotations click to browse term
  biological_process 19491
    metabolic process 11797
      organic substance metabolic process 11337
        macromolecule metabolic process 9793
          protein metabolic process 5893
            protein modification process 3614
              cellular protein modification process 3614
                protein deacylation 123
                  protein deacetylation 111
                    regulation of protein deacetylation 59
                      positive regulation of protein deacetylation 33
                        positive regulation of histone deacetylation + 23
                        positive regulation of tubulin deacetylation + 2
paths to the root