ONTOLOGY REPORT - ANNOTATIONS |
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Term: | nucleic acid phosphodiester bond hydrolysis |
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Accession: | GO:0090305
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browse the term
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Definition: | The nucleic acid metabolic process in which the phosphodiester bonds between nucleotides are cleaved by hydrolysis. |
Synonyms: | exact_synonym: | nucleic acid cleavage |
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Atad5 |
ATPase family, AAA domain containing 5 |
acts_upstream_of |
ISO |
MGI:4127920 (MGI:5763555|PMID:25404367) |
RGD |
PMID:25404367 |
MGI:5763555 |
NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845
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Ddx1 |
DEAD-box helicase 1 |
involved_in |
ISO |
(PMID:18710941) |
RGD |
PMID:18710941 |
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NCBI chr 6:35,996,469...36,027,340
Ensembl chr 6:35,996,469...36,027,365
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Dxo |
decapping exoribonuclease |
involved_in |
IBA ISO ISS |
PMID:21873635 (MGI:5488528|PMID:23523372) GO_REF:0000024 |
RGD UniProt |
PMID:23523372 PMID:21873635 |
GO_REF:0000024 MGI:5488528, RGD:13792537 |
NCBI chr20:3,993,322...3,995,484
Ensembl chr20:3,993,327...3,995,494
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Enpp1 |
ectonucleotide pyrophosphatase/phosphodiesterase 1 |
involved_in |
ISO |
(PMID:22285541) |
RGD |
PMID:22285541 |
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NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
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Exd2 |
exonuclease 3'-5' domain containing 2 |
involved_in |
ISO |
(PMID:26807646) |
RGD |
PMID:26807646 |
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NCBI chr 6:100,116,867...100,150,452
Ensembl chr 6:100,116,867...100,150,442
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Fen1 |
flap structure-specific endonuclease 1 |
involved_in |
ISO |
(PMID:18499658) |
RGD |
PMID:18499658 |
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NCBI chr 1:206,845,126...206,849,821
Ensembl chr 1:206,844,884...206,850,003
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Pde12 |
phosphodiesterase 12 |
involved_in |
ISO |
(PMID:22285541) |
RGD |
PMID:22285541 |
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NCBI chr16:1,915,386...1,925,427
Ensembl chr16:1,915,386...1,925,887
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Rad50 |
RAD50 double strand break repair protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396
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Setmar |
SET domain and mariner transposase fusion gene |
involved_in |
ISO |
(PMID:22231448) |
RGD |
PMID:22231448 |
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NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197
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Dcp1a |
decapping mRNA 1A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:5,656,788...5,702,151
Ensembl chr16:5,656,773...5,702,140
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Dcp1b |
decapping mRNA 1B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:152,358,267...152,395,747
Ensembl chr 4:152,358,241...152,397,145
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Edc3 |
enhancer of mRNA decapping 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:58,106,129...58,151,685
Ensembl chr 8:58,106,175...58,151,671
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Edc4 |
enhancer of mRNA decapping 4 |
involved_in |
IBA IEA |
PMID:21873635 GO_REF:0000002 |
InterPro |
PMID:21873635 |
GO_REF:0000002, RGD:13792537 |
NCBI chr19:33,774,062...33,786,054
Ensembl chr19:33,774,055...33,787,758
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AC119332.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 1:201,899,310...201,989,570
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C1h11orf80 |
similar to human chromosome 11 open reading frame 80 |
involved_in |
ISO |
(MGI:5752405|PMID:26917764) |
RGD |
PMID:26917764 |
MGI:5752405 |
NCBI chr 1:201,902,564...201,989,945
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Hormad1 |
HORMA domain containing 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4868505|PMID:21079677), (MGI:5009722|PMID:21478856) |
UniProt RGD |
PMID:21079677 PMID:21478856 |
GO_REF:0000024 MGI:4868505 MGI:5009722 |
NCBI chr 2:183,115,815...183,152,383
Ensembl chr 2:183,116,716...183,152,383
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Iho1 |
interactor of HORMAD1 1 |
involved_in |
IBA ISO |
PMID:21873635 (MGI:5822944|PMID:27723721) |
RGD |
PMID:27723721 PMID:21873635 |
MGI:5822944, RGD:13792537 |
NCBI chr 8:109,091,134...109,126,386
Ensembl chr 8:109,092,758...109,125,434
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Mei4 |
meiotic double-stranded break formation protein 4 |
involved_in |
IBA ISO |
PMID:21873635 (MGI:4457793|PMID:20551173) |
RGD |
PMID:20551173 PMID:21873635 |
MGI:4457793, RGD:13792537 |
NCBI chr 8:82,765,661...82,939,649
Ensembl chr 8:82,765,661...82,939,649
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Mre11 |
MRE11 homolog, double strand break repair nuclease |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279
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Spo11 |
SPO11, initiator of meiotic double stranded breaks |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925
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Ankrd31 |
ankyrin repeat domain 31 |
involved_in |
ISO |
(MGI:6316415|PMID:31003867), (MGI:6316551|PMID:31000436) |
RGD |
PMID:31000436 PMID:31003867 |
MGI:6316415 MGI:6316551 |
NCBI chr 2:28,079,187...28,241,722
Ensembl chr 2:28,092,882...28,241,719
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Zfp36 |
zinc finger protein 36 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:16364915) |
UniProt RGD |
PMID:16364915 |
GO_REF:0000024 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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Ankrd31 |
ankyrin repeat domain 31 |
involved_in |
ISO |
(MGI:6316415|PMID:31003867), (MGI:6316551|PMID:31000436) |
RGD |
PMID:31000436 PMID:31003867 |
MGI:6316415 MGI:6316551 |
NCBI chr 2:28,079,187...28,241,722
Ensembl chr 2:28,092,882...28,241,719
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