Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:nucleic acid phosphodiester bond hydrolysis
go back to main search page
Accession:GO:0090305 term browser browse the term
Definition:The nucleic acid metabolic process in which the phosphodiester bonds between nucleotides are cleaved by hydrolysis.
Synonyms:exact_synonym: nucleic acid cleavage



show annotations for term's descendants           Sort by:
 
nucleic acid phosphodiester bond hydrolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ac1576 uncharacterized LOC102552783 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:68,914,830...68,931,682
Ensembl chr10:68,914,830...68,930,985
JBrowse link
G Aen apoptosis enhancing nuclease involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:132,815,094...132,824,522
Ensembl chr 1:132,815,142...132,824,523
JBrowse link
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729
JBrowse link
G Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:19,425,684...19,508,459
Ensembl chr  X:19,487,419...19,508,439
JBrowse link
G Aplf aprataxin and PNKP like factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633
JBrowse link
G Aptx aprataxin involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:55,798,896...55,822,963
Ensembl chr 5:55,800,248...55,822,855
JBrowse link
G Aste1 asteroid homolog 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:106,026,570...106,044,694
Ensembl chr 8:106,026,515...106,044,430
JBrowse link
G Atad5 ATPase family, AAA domain containing 5 acts_upstream_of ISO MGI:4127920 (MGI:5763555|PMID:25404367) RGD PMID:25404367 MGI:5763555 NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845
JBrowse link
G Dclre1a DNA cross-link repair 1A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:255,569,911...255,589,815
Ensembl chr 1:255,569,919...255,589,678
JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423
JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:74,775,828...74,810,089
Ensembl chr17:74,776,935...74,809,186
JBrowse link
G Ddx1 DEAD-box helicase 1 involved_in ISO (PMID:18710941) RGD PMID:18710941 NCBI chr 6:35,996,469...36,027,340
Ensembl chr 6:35,996,469...36,027,365
JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:3574013|PMID:15572351)
GOC
RGD
PMID:15572351 GO_REF:0000108 MGI:3574013 NCBI chr 5:164,522,446...164,534,733
Ensembl chr 5:164,522,463...164,534,628
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA
ISO
GO_REF:0000108
(MGI:5499273|PMID:23604072)
GOC
RGD
PMID:23604072 GO_REF:0000108 MGI:5499273 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319
JBrowse link
G Dnase1 deoxyribonuclease 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:11,498,930...11,505,151
Ensembl chr10:11,498,931...11,501,869
JBrowse link
G Dnase1l1 deoxyribonuclease 1-like 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:152,056,942...152,065,518
Ensembl chr  X:152,056,942...152,065,518
JBrowse link
G Dnase1l2 deoxyribonuclease 1 like 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:13,471,850...13,473,447
Ensembl chr10:13,471,479...13,473,763
JBrowse link
G Dnase1l3 deoxyribonuclease 1-like 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:2385551|PMID:12050166)
GOC
RGD
PMID:12050166 GO_REF:0000108 MGI:2385551 NCBI chr15:16,922,335...16,948,322
Ensembl chr15:16,922,335...16,948,317
JBrowse link
G Dnase2 deoxyribonuclease 2, lysosomal involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:23,244,661...23,247,329
Ensembl chr19:23,244,664...23,247,376
JBrowse link
G Dnase2b deoxyribonuclease 2 beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:1891506|PMID:10497274)
GOC
RGD
PMID:10497274 GO_REF:0000108 MGI:1891506 NCBI chr 2:235,470,915...235,515,211
Ensembl chr 2:235,470,919...235,486,295
JBrowse link
G Dxo decapping exoribonuclease involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5488528|PMID:23523372)
GO_REF:0000024
RGD
UniProt
PMID:23523372 PMID:21873635 GO_REF:0000024 MGI:5488528, RGD:13792537 NCBI chr20:3,993,322...3,995,484
Ensembl chr20:3,993,327...3,995,494
JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:79,586,736...79,595,515
Ensembl chr10:79,586,729...79,595,435
JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:13,913,216...13,915,991
Ensembl chr10:13,913,221...13,915,968
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:22285541) RGD PMID:22285541 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
JBrowse link
G Enpp3 ectonucleotide pyrophosphatase/phosphodiesterase 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:20,563,700...20,635,044
Ensembl chr 1:20,563,697...20,635,041
JBrowse link
G Exd1 exonuclease 3'-5' domain containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:106,507,839...106,535,922
Ensembl chr 3:106,508,076...106,535,922
JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:100,116,867...100,150,452
Ensembl chr 6:100,116,867...100,150,442
JBrowse link
G Exo1 exonuclease 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:87,809,725...87,834,654
Ensembl chr13:87,809,810...87,834,654
JBrowse link
G Exo5 exonuclease 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:134,494,440...134,497,757
Ensembl chr 5:134,493,829...134,497,772
JBrowse link
G Fancm FA complementation group M involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:83,126,903...83,180,455
Ensembl chr 6:83,127,093...83,180,028
JBrowse link
G Fen1 flap structure-specific endonuclease 1 involved_in
acts_upstream_of_or_within
ISO (PMID:18499658)
(MGI:2183876|PMID:12162748)
RGD PMID:12162748 PMID:18499658 MGI:2183876 NCBI chr 1:206,845,126...206,849,821
Ensembl chr 1:206,844,884...206,850,003
JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:33,947,599...33,978,461
Ensembl chr 6:33,948,206...33,978,401
JBrowse link
G Harbi1 harbinger transposase derived 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:77,681,431...77,689,749
Ensembl chr 3:77,681,431...77,689,724
JBrowse link
G Las1l LAS1-like, ribosome biogenesis factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:60,851,969...60,873,717
Ensembl chr  X:60,851,962...60,873,687
JBrowse link
G LOC100361814 ribonuclease 16-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:24,486,826...24,512,825
Ensembl chr15:24,486,826...24,487,691
JBrowse link
G Meiob meiosis specific with OB-fold involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:13,833,170...13,865,684
Ensembl chr10:13,833,750...13,865,046
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279
JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843
JBrowse link
G Myg1 MYG1 exonuclease involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:133,456,778...133,463,985
Ensembl chr 7:133,456,750...133,466,969
JBrowse link
G N4bp2 NEDD4 binding protein 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:42,342,690...42,479,861
Ensembl chr14:42,409,510...42,483,960
JBrowse link
G Neil1 nei-like DNA glycosylase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:57,550,142...57,556,884
Ensembl chr 8:57,550,147...57,556,258
JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO (PMID:22285541) RGD PMID:22285541 NCBI chr16:1,915,386...1,925,427
Ensembl chr16:1,915,386...1,925,887
JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:46,797,853...46,799,621
Ensembl chr 2:46,797,853...46,799,746
JBrowse link
G Pld3 phospholipase D family, member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:82,821,863...82,844,280
Ensembl chr 1:82,821,875...82,844,072
JBrowse link
G Pld4 phospholipase D family, member 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:131,818,860...131,827,457
Ensembl chr 6:131,818,860...131,826,376
JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
MGI:2447628 (MGI:2445645|PMID:12429860)
GOC
RGD
PMID:12429860 GO_REF:0000108 MGI:2445645 NCBI chr 1:95,025,462...95,041,559
Ensembl chr 1:95,025,499...95,036,465
JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:46,345,420...46,393,984
Ensembl chr12:46,345,420...46,393,939
JBrowse link
G Polg DNA polymerase gamma, catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:3045911|PMID:15164064)
GOC
RGD
PMID:15164064 GO_REF:0000108 MGI:3045911 NCBI chr 1:133,382,764...133,399,578
Ensembl chr 1:133,382,766...133,398,567
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:59,461,597...59,469,707
Ensembl chr 2:59,461,607...59,469,689
JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IBA
IEA
PMID:21873635
GO_REF:0000108
GOC PMID:21873635 GO_REF:0000108, RGD:13792537 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396
JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:201,488,511...201,553,582
Ensembl chr 1:201,487,136...201,553,608
JBrowse link
G Rag1 recombination activating 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846
JBrowse link
G Rexo1 RNA exonuclease 1 homolog involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:9,154,050...9,173,454
Ensembl chr 7:9,154,061...9,173,454
JBrowse link
G Rexo1l1-ps1 REX1, RNA exonuclease 1 homolog-like 1, pseudogene 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:138,834,049...138,838,838
Ensembl chr 2:138,834,559...138,837,083
JBrowse link
G Rexo5 RNA exonuclease 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:174,168,633...174,264,526
Ensembl chr 1:174,168,694...174,241,486
JBrowse link
G Rnase1l1 ribonuclease, RNase A family, 1-like 1 (pancreatic) involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:24,338,216...24,339,934
Ensembl chr15:24,338,479...24,338,931
JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:22231448) RGD PMID:22231448 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197
JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:25,661,158...25,717,558
Ensembl chr20:25,662,055...25,716,319
JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775
JBrowse link
G Tatdn1 TatD DNase domain containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:90,451,025...90,481,000
Ensembl chr 7:90,441,079...90,481,133
JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:119,163,192...119,231,029
Ensembl chr 6:119,163,166...119,231,021
JBrowse link
G Tdp2 tyrosyl-DNA phosphodiesterase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:40,228,943...40,240,337
Ensembl chr17:40,228,947...40,240,313
JBrowse link
G Trex1 three prime repair exonuclease 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
JBrowse link
G Trex2 three prime repair exonuclease 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:151,151,862...151,153,470
Ensembl chr  X:151,151,864...151,153,479
JBrowse link
G Wrn WRN RecQ like helicase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670
JBrowse link
cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bop1 BOP1 ribosomal biogenesis factor involved_in ISO (MGI:3843427|PMID:17353269) RGD PMID:17353269 MGI:3843427 NCBI chr 7:108,172,062...108,195,875
Ensembl chr 7:108,172,066...108,195,931
JBrowse link
G Nol9 nucleolar protein 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:162,546,522...162,566,625
Ensembl chr 5:162,546,541...162,566,191
JBrowse link
G Npm1 nucleophosmin 1 IDA RGD PMID:9742256 RGD:11535027 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
cleavage involved in rRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhp2 NHP2 ribonucleoprotein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:35,877,015...35,880,409
Ensembl chr10:35,877,054...35,882,545
JBrowse link
G Nob1 NIN1 (RPN12) binding protein 1 homolog involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:35,322,803...35,335,354
Ensembl chr19:35,322,669...35,346,815
JBrowse link
G Rrp36 ribosomal RNA processing 36 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 9:14,308,810...14,316,959
Ensembl chr 9:14,308,982...14,316,110
JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcp1a decapping mRNA 1A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:5,656,788...5,702,151
Ensembl chr16:5,656,773...5,702,140
JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:152,358,267...152,395,747
Ensembl chr 4:152,358,241...152,397,145
JBrowse link
G Edc3 enhancer of mRNA decapping 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:58,106,129...58,151,685
Ensembl chr 8:58,106,175...58,151,671
JBrowse link
G Edc4 enhancer of mRNA decapping 4 involved_in IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr19:33,774,062...33,786,054
Ensembl chr19:33,774,055...33,787,758
JBrowse link
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abt1 activator of basal transcription 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,699,151...41,701,253
Ensembl chr17:41,699,147...41,701,259
JBrowse link
G Fcf1 Fcf1 rRNA-processing protein acts_upstream_of_or_within ISO (MGI:5617283|PMID:25190460) RGD PMID:25190460 MGI:5617283 NCBI chr 6:104,617,780...104,629,643
Ensembl chr 6:104,617,770...104,629,643
JBrowse link
G Nop9 NOP9 nucleolar protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:29,243,853...29,252,220
Ensembl chr15:29,243,862...29,252,220
JBrowse link
G Rcl1 RNA terminal phosphate cyclase-like 1 acts_upstream_of_or_within ISO (MGI:5617283|PMID:25190460) RGD PMID:25190460 MGI:5617283 NCBI chr 1:226,824,524...226,869,046
Ensembl chr 1:226,824,534...226,902,315
JBrowse link
G Tbl3 transducin (beta)-like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,726,127...13,731,340
Ensembl chr10:13,726,129...13,731,372
JBrowse link
G Utp23 UTP23, small subunit processome component acts_upstream_of_or_within ISO (MGI:5617283|PMID:25190460) RGD PMID:25190460 MGI:5617283 NCBI chr 7:83,185,187...83,196,652
Ensembl chr 7:83,189,656...83,196,655
JBrowse link
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abt1 activator of basal transcription 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,699,151...41,701,253
Ensembl chr17:41,699,147...41,701,259
JBrowse link
G AC135409.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:46,606,877...46,607,131 JBrowse link
G AC141489.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:153,387,176...153,387,427 JBrowse link
G Fcf1 Fcf1 rRNA-processing protein acts_upstream_of_or_within ISO (MGI:5617283|PMID:25190460) RGD PMID:25190460 MGI:5617283 NCBI chr 6:104,617,780...104,629,643
Ensembl chr 6:104,617,770...104,629,643
JBrowse link
G Nop9 NOP9 nucleolar protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:29,243,853...29,252,220
Ensembl chr15:29,243,862...29,252,220
JBrowse link
G Rcl1 RNA terminal phosphate cyclase-like 1 acts_upstream_of_or_within ISO (MGI:5617283|PMID:25190460) RGD PMID:25190460 MGI:5617283 NCBI chr 1:226,824,524...226,869,046
Ensembl chr 1:226,824,534...226,902,315
JBrowse link
G Rpp40 ribonuclease P/MRP subunit p40 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:28,947,730...28,956,790
Ensembl chr17:28,947,734...28,956,788
JBrowse link
G Rps21 ribosomal protein S21 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:167,346,437...167,347,459
Ensembl chr 3:167,346,201...167,347,470
JBrowse link
G Rps21-ps1 ribosomal protein S21, pseudogene 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:153,387,133...153,387,476
Ensembl chr 5:153,387,176...153,387,427
JBrowse link
G Rrs1 ribosome biogenesis regulator 1 homolog involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:9,733,486...9,735,119
Ensembl chr 5:9,733,091...9,735,140
JBrowse link
endonucleolytic cleavage involved in tRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpp40 ribonuclease P/MRP subunit p40 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:28,947,730...28,956,790
Ensembl chr17:28,947,734...28,956,788
JBrowse link
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bms1 BMS1 ribosome biogenesis factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:151,558,163...151,595,187
Ensembl chr 4:151,558,163...151,595,127
JBrowse link
G Rcl1 RNA terminal phosphate cyclase-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:226,824,524...226,869,046
Ensembl chr 1:226,824,534...226,902,315
JBrowse link
G Tsr1 TSR1, ribosome maturation factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:59,760,420...59,771,868
Ensembl chr10:59,760,409...59,771,864
JBrowse link
endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC135409.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:46,606,877...46,607,131 JBrowse link
G AC141489.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:153,387,176...153,387,427 JBrowse link
G Rps21 ribosomal protein S21 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:167,346,437...167,347,459
Ensembl chr 3:167,346,201...167,347,470
JBrowse link
G Rps21-ps1 ribosomal protein S21, pseudogene 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:153,387,133...153,387,476
Ensembl chr 5:153,387,176...153,387,427
JBrowse link
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abt1 activator of basal transcription 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,699,151...41,701,253
Ensembl chr17:41,699,147...41,701,259
JBrowse link
G Nop9 NOP9 nucleolar protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:29,243,853...29,252,220
Ensembl chr15:29,243,862...29,252,220
JBrowse link
G Tbl3 transducin (beta)-like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,726,127...13,731,340
Ensembl chr10:13,726,129...13,731,372
JBrowse link
exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eri1 exoribonuclease 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:56,724,101...56,744,228
Ensembl chr16:56,724,115...56,744,226
JBrowse link
G Eri2 ERI1 exoribonuclease family member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:174,140,831...174,168,757
Ensembl chr 1:174,141,993...174,168,665
JBrowse link
G Eri3 ERI1 exoribonuclease family member 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:131,016,146...131,143,347
Ensembl chr 5:131,016,126...131,143,329
JBrowse link
G Exosc10 exosome component 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:158,995,318...159,018,946
Ensembl chr 5:158,995,313...159,018,940
JBrowse link
G Exosc2 exosome component 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:14,962,930...14,973,645
Ensembl chr 3:14,962,917...14,973,575
JBrowse link
G Exosc3 exosome component 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
JBrowse link
G Exosc7 exosome component 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:122,773,607...122,798,943
Ensembl chr 8:122,773,591...122,799,270
JBrowse link
G Exosc8 exosome component 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:138,930,405...138,937,009
Ensembl chr 2:138,930,405...138,936,928
JBrowse link
G Exosc9 exosome component 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051
JBrowse link
meiotic DNA double-strand break formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC119332.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:201,899,310...201,989,570 JBrowse link
G Hormad1 HORMA domain containing 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4868505|PMID:21079677), (MGI:5009722|PMID:21478856)
UniProt
RGD
PMID:21079677 PMID:21478856 GO_REF:0000024 MGI:4868505 MGI:5009722 NCBI chr 2:183,115,815...183,152,383
Ensembl chr 2:183,116,716...183,152,383
JBrowse link
G Iho1 interactor of HORMAD1 1 involved_in IBA
ISO
PMID:21873635
(MGI:5822944|PMID:27723721)
RGD PMID:27723721 PMID:21873635 MGI:5822944, RGD:13792537 NCBI chr 8:109,091,134...109,126,386
Ensembl chr 8:109,092,758...109,125,434
JBrowse link
G Mei4 meiotic double-stranded break formation protein 4 involved_in IBA
ISO
PMID:21873635
(MGI:4457793|PMID:20551173)
RGD PMID:20551173 PMID:21873635 MGI:4457793, RGD:13792537 NCBI chr 8:82,765,661...82,939,649
Ensembl chr 8:82,765,661...82,939,649
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279
JBrowse link
G RGD1563323 similar to hypothetical protein FLJ22531 involved_in ISO (MGI:5752405|PMID:26917764) RGD PMID:26917764 MGI:5752405 NCBI chr 1:201,902,564...201,989,945 JBrowse link
G Spo11 SPO11, initiator of meiotic double stranded breaks involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925
JBrowse link
meiotic DNA double-strand break formation involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd31 ankyrin repeat domain 31 involved_in ISO (MGI:6316415|PMID:31003867), (MGI:6316551|PMID:31000436) RGD PMID:31000436 PMID:31003867 MGI:6316415 MGI:6316551 NCBI chr 2:28,079,187...28,241,722
Ensembl chr 2:28,092,882...28,241,719
JBrowse link
mitochondrial tRNA 3'-trailer cleavage, endonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elac2 elaC ribonuclease Z 2 involved_in ISO
IBA
ISS
(PMID:21593607)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:21593607 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:49,632,308...49,655,614
Ensembl chr10:49,632,378...49,655,614
JBrowse link
mRNA cleavage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ern1 endoplasmic reticulum to nucleus signaling 1 involved_in ISO (MGI:6114871|PMID:25164867) RGD PMID:25164867 MGI:6114871 NCBI chr10:91,326,889...91,421,201
Ensembl chr10:91,330,654...91,421,029
JBrowse link
G Pcf11 PCF11 cleavage and polyadenylation factor subunit involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:146,694,045...146,724,030
Ensembl chr 1:146,697,646...146,724,124
JBrowse link
G Polr1h RNA polymerase I subunit H involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:1,594,936...1,598,854
Ensembl chr20:1,594,936...1,598,854
JBrowse link
G Polr2i RNA polymerase II subunit I involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:85,483,515...85,484,952
Ensembl chr 1:85,483,515...85,484,952
JBrowse link
mRNA cleavage involved in mRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ern1 endoplasmic reticulum to nucleus signaling 1 involved_in ISO (PMID:21317875) RGD PMID:21317875 NCBI chr10:91,326,889...91,421,201
Ensembl chr10:91,330,654...91,421,029
JBrowse link
nucleotide-excision repair, DNA incision term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:22547097) RGD PMID:22547097 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in IBA
ISO
PMID:21873635
(PMID:8692841)
RGD PMID:8692841 PMID:21873635 RGD:13792537 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO
IBA
(PMID:17466626), (PMID:8692841)
PMID:21873635
RGD PMID:8692841 PMID:17466626 PMID:21873635 RGD:13792537 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:10413517), (PMID:22547097)
(PMID:22547097)
(PMID:10413517), (PMID:22547097), (PMID:32034146)
RGD PMID:10413517 PMID:22547097 PMID:32034146 NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369
JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO (PMID:20603015), (PMID:20603016), (PMID:25430771) RGD PMID:20603015 PMID:20603016 PMID:25430771 NCBI chr 1:117,915,323...117,945,044
Ensembl chr 1:117,917,099...117,944,977
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within ISO (PMID:19506022) RGD PMID:19506022 NCBI chr 4:146,474,701...146,481,959
Ensembl chr 4:146,474,750...146,484,766
JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA
ISO
PMID:21873635
(PMID:21148310)
RGD PMID:21148310 PMID:21873635 RGD:13792537 NCBI chr 5:60,431,673...60,476,438
Ensembl chr 5:60,431,673...60,475,726
JBrowse link
nucleotide-excision repair, DNA incision, 3'-to lesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:7657672) RGD PMID:7657672 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:11790111) RGD PMID:11790111 NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369
JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in IBA
ISO
PMID:21873635
(PMID:32522879), (PMID:32821917), (PMID:7657672), (PMID:8090225)
RGD PMID:7657672 PMID:8090225 PMID:32522879 PMID:32821917 PMID:21873635 RGD:13792537 NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472
JBrowse link
nucleotide-excision repair, DNA incision, 5'-to lesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO
IBA
(PMID:7657672)
PMID:21873635
RGD PMID:7657672 PMID:21873635 RGD:13792537 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO
IBA
(PMID:11790111), (PMID:14728600)
PMID:21873635
RGD PMID:11790111 PMID:14728600 PMID:21873635 RGD:13792537 NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369
JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:954,927...983,651
Ensembl chr10:954,977...983,174
JBrowse link
G Nthl1 nth-like DNA glycosylase 1 involved_in IBA
ISO
PMID:21873635
(MGI:1289919|PMID:9743625)
(PMID:8990169)
RGD PMID:8990169 PMID:9743625 PMID:21873635 MGI:1289919, RGD:13792537 NCBI chr10:13,655,791...13,661,958
Ensembl chr10:13,655,785...13,661,957
JBrowse link
positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp36 zinc finger protein 36 involved_in ISS
ISO
GO_REF:0000024
(PMID:16364915)
UniProt
RGD
PMID:16364915 GO_REF:0000024 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
positive regulation of meiotic DNA double-strand break formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd31 ankyrin repeat domain 31 involved_in ISO (MGI:6316415|PMID:31003867), (MGI:6316551|PMID:31000436) RGD PMID:31000436 PMID:31003867 MGI:6316415 MGI:6316551 NCBI chr 2:28,079,187...28,241,722
Ensembl chr 2:28,092,882...28,241,719
JBrowse link
positive regulation of mRNA cleavage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt21 nudix hydrolase 21 involved_in ISO
ISS
(PMID:15937220)
GO_REF:0000024
RGD
UniProt
PMID:15937220 GO_REF:0000024 NCBI chr19:10,974,800...10,993,841
Ensembl chr19:10,974,241...10,991,682
JBrowse link
pre-mRNA cleavage required for polyadenylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpsf2 cleavage and polyadenylation specific factor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:121,123,941...121,152,756
Ensembl chr 6:121,120,569...121,151,921
JBrowse link
G Cpsf4 cleavage and polyadenylation specific factor 4 involved_in IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr12:9,429,765...9,445,582
Ensembl chr12:9,429,523...9,445,586
JBrowse link
G Cpsf4l cleavage and polyadenylation specific factor 4-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:98,741,816...98,756,069
Ensembl chr10:98,743,649...98,751,590
JBrowse link
G Cpsf6 cleavage and polyadenylation specific factor 6 involved_in ISO
IBA
(PMID:20695905)
PMID:21873635
RGD PMID:20695905 PMID:21873635 RGD:13792537 NCBI chr 7:52,956,589...53,001,783
Ensembl chr 7:52,956,589...52,988,122
JBrowse link
G Cpsf7 cleavage and polyadenylation specific factor 7 involved_in ISO
ISS
IBA
(PMID:20695905), (PMID:23187700)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:20695905 PMID:23187700 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:207,167,690...207,191,865
Ensembl chr 1:207,167,859...207,191,905
JBrowse link
G Cstf2 cleavage stimulation factor subunit 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:97,253,559...97,279,476
Ensembl chr  X:97,253,586...97,279,476
JBrowse link
G Fip1l1 factor interacting with PAPOLA and CPSF1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:33,615,210...33,675,742
Ensembl chr14:33,617,720...33,675,708
JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO
ISS
(PMID:9342333)
GO_REF:0000024
RGD
UniProt
PMID:9342333 GO_REF:0000024 NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in ISO (PMID:9342333) RGD PMID:9342333 NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885
JBrowse link
G Nudt21 nudix hydrolase 21 involved_in ISO (PMID:20695905) RGD PMID:20695905 NCBI chr19:10,974,800...10,993,841
Ensembl chr19:10,974,241...10,991,682
JBrowse link
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific involved_in ISO
ISS
(PMID:21102410)
GO_REF:0000024
RGD
UniProt
PMID:21102410 GO_REF:0000024 NCBI chr 1:205,848,691...205,859,767
Ensembl chr 1:205,848,772...205,859,764
JBrowse link
RNA phosphodiester bond hydrolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ang angiogenin acts_upstream_of_or_within ISO (MGI:52993|PMID:8448182)
(MGI:5563005|PMID:23170778)
RGD PMID:8448182 PMID:23170778 MGI:52993 MGI:5563005 NCBI chr15:24,317,733...24,323,361 JBrowse link
G Ang2 angiogenin, ribonuclease A family, member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:5563005|PMID:23170778)
GOC
RGD
PMID:23170778 GO_REF:0000108 MGI:5563005 NCBI chr15:24,398,383...24,415,837
Ensembl chr15:24,398,419...24,398,922
JBrowse link
G Dicer1 dicer 1 ribonuclease III involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Ear1 eosinophil-associated, ribonuclease A family, member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:24,555,280...24,556,199
Ensembl chr15:24,555,298...24,556,199
JBrowse link
G Helz2 helicase with zinc finger 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:168,338,813...168,353,219
Ensembl chr 3:168,338,813...168,353,159
JBrowse link
G LOC100361866 eosinophil cationic protein-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:24,535,698...24,536,665
Ensembl chr15:24,535,700...24,536,592
JBrowse link
G Marf1 meiosis regulator and mRNA stability factor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:888,053...932,760
Ensembl chr10:888,076...932,753
JBrowse link
G N4bp1 Nedd4 binding protein 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:20,222,811...20,273,570
Ensembl chr19:20,222,776...20,273,570
JBrowse link
G Rnase1 ribonuclease A family member 1, pancreatic involved_in ISO
IBA
(PMID:9826755)
PMID:21873635
RGD PMID:9826755 PMID:21873635 RGD:13792537 NCBI chr15:24,361,924...24,363,658
Ensembl chr15:24,361,927...24,363,624
JBrowse link
G Rnase17 ribonuclease 17 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:24,499,178...24,500,140
Ensembl chr15:24,499,178...24,500,095
JBrowse link
G Rnase1l1 ribonuclease, RNase A family, 1-like 1 (pancreatic) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:24,338,216...24,339,934
Ensembl chr15:24,338,479...24,338,931
JBrowse link
G Rnase1l2 ribonuclease, RNase A family, 1-like 2 (pancreatic) involved_in IBA
ISO
PMID:21873635
(PMID:9826755)
RGD PMID:9826755 PMID:21873635 RGD:13792537 NCBI chr15:24,421,825...24,423,513
Ensembl chr15:24,421,859...24,423,611
JBrowse link
G Rnase2 ribonuclease A family member 2 involved_in ISO (PMID:9826755) RGD PMID:9826755 NCBI chr15:24,449,618...24,450,427
Ensembl chr15:24,449,611...24,450,479
JBrowse link
G Rnase3 ribonuclease A family member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:24,511,894...24,512,764
Ensembl chr15:24,511,891...24,512,790
JBrowse link
G Rnase4 ribonuclease A family member 4 involved_in ISO
IEA
(PMID:3467790)
GO_REF:0000107
RGD
Ensembl
PMID:3467790 GO_REF:0000107 NCBI chr15:24,312,765...24,330,116
Ensembl chr15:24,312,464...24,330,117
JBrowse link
G Rnase6 ribonuclease A family member k6 involved_in ISO (PMID:9826755) RGD PMID:9826755 NCBI chr15:24,354,305...24,357,289
Ensembl chr15:24,354,303...24,357,328
JBrowse link
G Rnasel ribonuclease L involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:65,894,990...65,910,354
Ensembl chr13:65,901,459...65,908,704
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO
GO_REF:0000024
(MGI:3842851|PMID:19322177)
UniProt
RGD
PMID:19322177 GO_REF:0000024 MGI:3842851 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
RNA phosphodiester bond hydrolysis, endonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC118772.1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr10:68,067,119...68,089,948 JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:4462112|PMID:20424607)
GOC
RGD
PMID:20424607 GO_REF:0000108 MGI:4462112 NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Ago3 argonaute RISC catalytic component 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:24,144,595...24,146,785
Ensembl chr15:24,144,362...24,146,785
JBrowse link
G Cpsf3 cleavage and polyadenylation specific factor 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:40,836,121...40,864,129
Ensembl chr 6:40,836,097...40,864,128
JBrowse link
G Dbr1 debranching RNA lariats 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:1890021|PMID:10982890)
GOC
RGD
PMID:10982890 GO_REF:0000108 MGI:1890021 NCBI chr 8:100,139,039...100,150,768
Ensembl chr 8:100,139,034...100,151,030
JBrowse link
G Dicer1 dicer 1 ribonuclease III involved_in ISO (PMID:21753850), (PMID:25549615) RGD PMID:21753850 PMID:25549615 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Drosha drosha ribonuclease III involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:61,864,886...61,976,688
Ensembl chr 2:61,864,970...61,976,688
JBrowse link
G Edc3 enhancer of mRNA decapping 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:58,106,129...58,151,685
Ensembl chr 8:58,106,175...58,151,671
JBrowse link
G Endog endonuclease G involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932
JBrowse link
G Endou endonuclease, poly(U)-specific involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:128,845,862...128,866,542
Ensembl chr 7:128,844,862...128,866,596
JBrowse link
G Endov endonuclease V involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:104,760,059...104,777,732
Ensembl chr10:104,760,137...104,775,969
JBrowse link
G Ern1 endoplasmic reticulum to nucleus signaling 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:91,326,889...91,421,201
Ensembl chr10:91,330,654...91,421,029
JBrowse link
G Ern2 endoplasmic reticulum to nucleus signaling 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:176,726,454...176,743,289
Ensembl chr 1:176,726,454...176,743,289
JBrowse link
G Exog exo/endonuclease G involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:119,184,974...119,204,819
Ensembl chr 8:119,185,136...119,204,672
JBrowse link
G Fen1 flap structure-specific endonuclease 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:206,845,126...206,849,821
Ensembl chr 1:206,844,884...206,850,003
JBrowse link
G Ints11 integrator complex subunit 11 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:166,479,134...166,497,956
Ensembl chr 5:166,479,155...166,497,651
JBrowse link
G Khnyn KH and NYN domain containing involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:29,365,399...29,379,650
Ensembl chr15:29,365,260...29,376,967
JBrowse link
G Lactb2 lactamase, beta 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:26826708)
UniProt
RGD
PMID:26826708 GO_REF:0000024 NCBI chr 5:5,569,080...5,591,843
Ensembl chr 5:5,569,067...5,596,429
JBrowse link
G LOC688828 similar to Nucleoside diphosphate-linked moiety X motif 16 (Nudix motif 16) involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:105,754,821...105,756,548
Ensembl chr 8:105,754,844...105,756,518
JBrowse link
G Mblac1 metallo-beta-lactamase domain containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:17,071,465...17,072,736
Ensembl chr12:17,071,465...17,072,735
JBrowse link
G Mrpl44 mitochondrial ribosomal protein L44 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:81,106,658...81,111,709
Ensembl chr 9:81,106,655...81,112,812
JBrowse link
G Nob1 NIN1 (RPN12) binding protein 1 homolog involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:35,322,803...35,335,354
Ensembl chr19:35,322,669...35,346,815
JBrowse link
G Nudt12 nudix hydrolase 12 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:98,741,627...98,755,039
Ensembl chr 9:98,742,360...98,755,039
JBrowse link
G Nudt16 nudix hydrolase 16 involved_in ISO (PMID:29483298) RGD PMID:29483298 NCBI chr 8:105,739,927...105,741,982
Ensembl chr 8:105,739,623...105,741,998
JBrowse link
G Nynrin NYN domain and retroviral integrase containing involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:29,332,873...29,355,215
Ensembl chr15:29,332,869...29,355,215
JBrowse link
G Piwil1 piwi-like RNA-mediated gene silencing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:27,949,743...27,970,645
Ensembl chr12:27,949,744...27,970,580
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Pld6 phospholipase D family, member 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:44,577,740...44,581,686
Ensembl chr10:44,577,675...44,581,077
JBrowse link
G Pop1 POP1 homolog, ribonuclease P/MRP subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:65,705,348...65,733,143
Ensembl chr 7:65,705,368...65,733,141
JBrowse link
G Pop4 POP4 homolog, ribonuclease P/MRP subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:90,960,026...90,968,360
Ensembl chr 1:90,960,022...90,968,443
JBrowse link
G Pop5 POP5 homolog, ribonuclease P/MRP subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:41,376,755...41,384,882
Ensembl chr12:41,376,755...41,381,336
JBrowse link
G Pop7 POP7 homolog, ribonuclease P/MRP subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:19,189,384...19,190,425
Ensembl chr12:19,189,138...19,190,674
JBrowse link
G Prorp protein only RNase P catalytic subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:72,669,659...72,762,419
Ensembl chr 6:72,670,847...72,762,416
JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:65,691,429...65,705,257
Ensembl chr 7:65,691,435...65,705,716
JBrowse link
G Rnase1 ribonuclease A family member 1, pancreatic involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:24,361,924...24,363,658
Ensembl chr15:24,361,927...24,363,624
JBrowse link
G Rnase1l1 ribonuclease, RNase A family, 1-like 1 (pancreatic) involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:24,338,216...24,339,934
Ensembl chr15:24,338,479...24,338,931
JBrowse link
G Rnase1l2 ribonuclease, RNase A family, 1-like 2 (pancreatic) involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:24,421,825...24,423,513
Ensembl chr15:24,421,859...24,423,611
JBrowse link
G Rnaseh1 ribonuclease H1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:45,282,849...45,292,258
Ensembl chr 6:45,282,854...45,292,236
JBrowse link
G Rnaseh2a ribonuclease H2, subunit A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:23,186,325...23,196,045
Ensembl chr19:23,186,383...23,196,041
JBrowse link
G Rnasek ribonuclease K involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:54,954,904...54,956,622
Ensembl chr10:54,951,991...54,956,601
JBrowse link
G Rnaset2 ribonuclease T2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:52,576,344...52,603,151
Ensembl chr 1:52,585,929...52,603,147
JBrowse link
G Rpp14 ribonuclease P/MRP subunit p14 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:16,837,796...16,847,970
Ensembl chr15:16,837,743...16,847,765
JBrowse link
G Rpp21 ribonuclease P/MRP subunit p21 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:2,018,170...2,020,100
Ensembl chr20:2,018,147...2,020,106
JBrowse link
G Rpp25 ribonuclease P and MRP subunit p25 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:57,907,352...57,908,732
Ensembl chr 8:57,907,352...57,908,732
JBrowse link
G Rpp30 ribonuclease P/MRP subunit p30 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:233,786,048...233,808,958
Ensembl chr 1:233,786,099...233,808,952
JBrowse link
G Rpp38 ribonuclease P/MRP subunit p38 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:74,914,066...74,917,742
Ensembl chr17:74,908,932...74,927,431
JBrowse link
G Slfn13 schlafen family member 13 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:67,909,105...67,955,912
Ensembl chr10:67,909,106...67,925,383
JBrowse link
G Slfn14 schlafen family member 14 involved_in ISO (PMID:25996083)
(MGI:5705207|PMID:25996083)
RGD PMID:25996083 MGI:5705207 NCBI chr10:68,076,326...68,087,794 JBrowse link
G Smg6 SMG6 nonsense mediated mRNA decay factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:59,786,258...60,014,395
Ensembl chr10:59,786,258...60,014,395
JBrowse link
G Snd1 staphylococcal nuclease and tudor domain containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:57,095,205...57,494,501
Ensembl chr 4:57,095,208...57,530,843
JBrowse link
G Tsen2 tRNA splicing endonuclease subunit 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:148,602,805...148,638,219
Ensembl chr 4:148,602,863...148,638,215
JBrowse link
G Tsen34 tRNA splicing endonuclease subunit 34 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:65,517,324...65,525,194
Ensembl chr 1:65,517,330...65,524,412
JBrowse link
G Tsnax translin-associated factor X involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:52,975,848...52,989,886
Ensembl chr19:52,975,659...52,989,878
JBrowse link
G Ybey ybeY metalloendoribonuclease involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:12,165,192...12,174,713
Ensembl chr20:12,165,237...12,174,713
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO
IBA
ISS
(PMID:22055188)
PMID:21873635
(MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671)
GO_REF:0000024
RGD
UniProt
PMID:22055188 PMID:26000482 PMID:26255671 PMID:21873635 GO_REF:0000024 MGI:5706859 MGI:5751631, RGD:13792537 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
G Zc3h12b zinc finger CCCH-type containing 12B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:60,615,616...60,849,278
Ensembl chr  X:60,615,682...60,844,832
JBrowse link
G Zc3h12c zinc finger CCCH type containing 12C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:52,443,791...52,508,643
Ensembl chr 8:52,448,320...52,504,315
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:2,313,110...2,348,820
Ensembl chr 1:2,314,324...2,348,819
JBrowse link
RNA phosphodiester bond hydrolysis, exonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel1 angel homolog 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:106,349,125...106,386,202
Ensembl chr 6:106,349,126...106,386,209
JBrowse link
G Angel2 angel homolog 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:102,509,111...102,529,501
Ensembl chr13:102,510,589...102,529,493
JBrowse link
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574
JBrowse link
G Cnot2 CCR4-NOT transcription complex, subunit 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:52,130,444...52,222,338
Ensembl chr 7:52,130,441...52,223,575
JBrowse link
G Cnot6 CCR4-NOT transcription complex, subunit 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:33,978,785...34,031,025
Ensembl chr10:33,980,831...34,031,025
JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:3828348|PMID:17452450)
GOC
RGD
PMID:17452450 GO_REF:0000108 MGI:3828348 NCBI chr14:13,410,501...13,502,511
Ensembl chr14:13,411,281...13,498,203
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
JBrowse link
G Cnot8 CCR4-NOT transcription complex, subunit 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:42,281,614...42,294,740
Ensembl chr10:42,281,722...42,294,730
JBrowse link
G Cpsf3 cleavage and polyadenylation specific factor 3 involved_in ISO (MGI:4418605|PMID:18955505) RGD PMID:18955505 MGI:4418605 NCBI chr 6:40,836,121...40,864,129
Ensembl chr 6:40,836,097...40,864,128
JBrowse link
G Dcp2 decapping mRNA 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
JBrowse link
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:75,820,040...75,850,450
Ensembl chr15:75,823,436...75,850,642
JBrowse link
G Dis3l DIS3-like exosome 3'-5' exoribonuclease involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:64,803,925...64,840,306
Ensembl chr 8:64,803,927...64,840,165
JBrowse link
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:87,355,409...87,736,616
Ensembl chr 9:87,356,457...87,736,616
JBrowse link
G Isg20 interferon stimulated exonuclease gene 20 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:132,829,303...132,837,027
Ensembl chr 1:132,815,123...132,837,027
JBrowse link
G Isg20l2 interferon stimulated exonuclease gene 20-like 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:173,396,780...173,407,102
Ensembl chr 2:173,396,780...173,406,614
JBrowse link
G LOC103690064 m7GpppN-mRNA hydrolase-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108
G Noct nocturnin involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
JBrowse link
G Pan2 poly(A) specific ribonuclease subunit PAN2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:729,146...747,744
Ensembl chr 7:729,562...747,744
JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:7,476,707...7,595,380
Ensembl chr12:7,476,697...7,599,204
JBrowse link
G Parn poly(A)-specific ribonuclease involved_in ISO (PMID:26482878) RGD PMID:26482878 NCBI chr10:1,410,636...1,548,573
Ensembl chr10:1,410,642...1,548,560
JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO
IEA
(PMID:21245038), (PMID:21666256)
GO_REF:0000107
RGD
Ensembl
PMID:21245038 PMID:21666256 GO_REF:0000107 NCBI chr16:1,915,386...1,925,427
Ensembl chr16:1,915,386...1,925,887
JBrowse link
G Pnldc1 PARN like ribonuclease domain containing exonuclease 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:47,843,224...47,861,675
Ensembl chr 1:47,843,224...47,861,674
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
JBrowse link
G Rexo2 RNA exonuclease 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:48,811,900...48,823,622
Ensembl chr 8:48,811,900...48,823,622
JBrowse link
G Toe1 target of EGR1, exonuclease involved_in ISO (PMID:17178830) RGD PMID:17178830 NCBI chr 5:130,270,485...130,274,050
Ensembl chr 5:130,262,319...130,274,050
JBrowse link
G Trir telomerase RNA component interacting RNase involved_in ISO
IBA
(PMID:28322335)
PMID:21873635
RGD PMID:28322335 PMID:21873635 RGD:13792537 NCBI chr19:23,125,083...23,128,502
Ensembl chr19:23,125,083...23,128,510
JBrowse link
G Usb1 U6 snRNA biogenesis phosphodiesterase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:9,689,313...9,702,306
Ensembl chr19:9,689,316...9,702,302
JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO (MGI:86601|PMID:9049243) RGD PMID:9049243 MGI:86601 NCBI chr 8:96,527,871...96,637,385
Ensembl chr 8:96,528,195...96,632,739
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:134,436,916...134,509,308
Ensembl chr 3:134,437,109...134,509,306
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
tRNA 3'-trailer cleavage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elac1 elaC ribonuclease Z 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:67,321,231...67,341,358
Ensembl chr18:67,323,583...67,340,936
JBrowse link
G Polr3k RNA polymerase III subunit K involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:168,982,846...168,987,043
Ensembl chr 3:168,982,812...168,987,040
JBrowse link
tRNA 3'-trailer cleavage, endonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elac1 elaC ribonuclease Z 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:67,321,231...67,341,358
Ensembl chr18:67,323,583...67,340,936
JBrowse link
G Elac2 elaC ribonuclease Z 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:49,632,308...49,655,614
Ensembl chr10:49,632,378...49,655,614
JBrowse link
UV-damage excision repair, DNA incision term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO MGI:1931883 (MGI:3697767|PMID:17049932) RGD PMID:17049932 MGI:3697767 NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18734
    metabolic process 11458
      organic substance metabolic process 11020
        macromolecule metabolic process 9466
          nucleic acid metabolic process 4844
            nucleic acid phosphodiester bond hydrolysis 234
              RNA phosphodiester bond hydrolysis + 146
              UV-damage excision repair, DNA incision 1
              deadenylation-independent decapping of nuclear-transcribed mRNA + 5
              meiotic DNA double-strand break formation + 8
              nucleotide-excision repair, DNA incision + 10
              viral DNA cleavage involved in viral genome maturation 0
Path 2
Term Annotations click to browse term
  biological_process 18734
    metabolic process 11458
      cellular metabolic process 9697
        cellular aromatic compound metabolic process 5556
          nucleobase-containing compound metabolic process 5335
            nucleic acid metabolic process 4844
              nucleic acid phosphodiester bond hydrolysis 234
                RNA phosphodiester bond hydrolysis + 146
                UV-damage excision repair, DNA incision 1
                deadenylation-independent decapping of nuclear-transcribed mRNA + 5
                meiotic DNA double-strand break formation + 8
                nucleotide-excision repair, DNA incision + 10
                viral DNA cleavage involved in viral genome maturation 0
paths to the root