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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of wound healing
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Accession:GO:0090303 term browser browse the term
Definition:Any process that increases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.


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positive regulation of wound healing term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 ISO (PMID:25705373) RGD PMID:25705373 NCBI chr10:109,518,429...109,521,288
Ensembl chr 3:75,643,054...75,644,954
Ensembl chr10:75,643,054...75,644,954
JBrowse link
G Adra2a adrenoceptor alpha 2A ISO (PMID:17655843) RGD PMID:17655843 NCBI chr 1:274,766,283...274,769,083
Ensembl chr 1:274,766,283...274,769,081
JBrowse link
G Anxa1 annexin A1 ISO
IBA
ISS
(PMID:25664854)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:25664854, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:237,893,983...237,910,002
Ensembl chr 1:237,893,966...237,910,012
JBrowse link
G Arfgef1 ADP ribosylation factor guanine nucleotide exchange factor 1 ISO
ISS
(PMID:22084092)
GO_REF:0000024
RGD
UniProt
PMID:22084092 GO_REF:0000024 NCBI chr 5:8,666,046...8,760,458
Ensembl chr 5:8,666,200...8,760,458
JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 ISO (PMID:23389627) RGD PMID:23389627 NCBI chr 2:187,964,100...188,022,847
Ensembl chr 2:187,977,008...188,021,377
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IMP RGD PMID:12831234 RGD:11526146 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Ccn4 cellular communication network factor 4 IEA
ISO
GO_REF:0000107
(MGI:MGI:6196779|PMID:29330021)
Ensembl
RGD
PMID:29330021 GO_REF:0000107, MGI:MGI:6196779 NCBI chr 7:107,695,227...107,723,759
Ensembl chr 7:107,695,215...107,723,772
JBrowse link
G Cldn1 claudin 1 ISO (PMID:28412298) RGD PMID:28412298 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416
JBrowse link
G Cldn3 claudin 3 ISO (PMID:16103090) RGD PMID:16103090 NCBI chr12:21,831,341...21,832,813
Ensembl chr12:21,831,342...21,832,813
JBrowse link
G Cldn4 claudin 4 ISO (PMID:16103090) RGD PMID:16103090 NCBI chr12:24,761,210...24,763,008
Ensembl chr12:24,761,210...24,763,005
JBrowse link
G Clec7a C-type lectin domain containing 7A ISO
IBA
(PMID:24721111)
PMID:21873635
RGD PMID:24721111, PMID:21873635 RGD:13792537 NCBI chr 4:163,216,152...163,227,367
Ensembl chr 4:163,216,163...163,227,334
JBrowse link
G Dmtn dematin actin binding protein ISO (MGI:MGI:3803395|PMID:18505823) RGD PMID:18505823 MGI:MGI:3803395 NCBI chr15:52,292,762...52,320,385
Ensembl chr15:52,292,765...52,320,385
JBrowse link
G Duox1 dual oxidase 1 IEA
ISO
GO_REF:0000107
UniProtKB:Q1HG43-2 (PMID:19339556)
Ensembl
RGD
PMID:19339556 GO_REF:0000107 NCBI chr 3:114,251,794...114,286,827
Ensembl chr 3:114,253,637...114,286,802
JBrowse link
G Duox2 dual oxidase 2 ISO UniProtKB:Q1HG44 (PMID:19339556) RGD PMID:19339556 NCBI chr 3:114,218,187...114,237,808
Ensembl chr 3:114,218,193...114,235,933
JBrowse link
G Hbegf heparin-binding EGF-like growth factor ISO (PMID:17655843) RGD PMID:17655843 NCBI chr18:29,330,302...29,340,185
Ensembl chr18:29,329,764...29,340,403
JBrowse link
G Hmgb1 high mobility group box 1 ISO (MGI:MGI:3760906|PMID:16365390) RGD PMID:16365390 MGI:MGI:3760906 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO (PMID:23027131) RGD PMID:23027131 NCBI chr 1:214,178,404...214,181,841
Ensembl chr 1:214,178,407...214,181,686
JBrowse link
G Insl3 insulin-like 3 ISO (PMID:23539510) RGD PMID:23539510 NCBI chr16:20,120,753...20,122,702
Ensembl chr16:20,121,352...20,122,696
JBrowse link
G Itgb1 integrin subunit beta 1 ISO
IEA
(PMID:26763945)
GO_REF:0000107
RGD
Ensembl
PMID:26763945 GO_REF:0000107 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Kank1 KN motif and ankyrin repeat domains 1 ISO (PMID:22084092) RGD PMID:22084092 NCBI chr 1:243,201,073...243,398,531
Ensembl chr 1:243,276,403...243,398,536
JBrowse link
G Mylk myosin light chain kinase ISO (PMID:15825080) RGD PMID:15825080 NCBI chr11:69,013,060...69,260,039
Ensembl chr11:69,013,050...69,223,158
JBrowse link
G Ocln occludin ISO (PMID:20152177) RGD PMID:20152177 NCBI chr 2:30,527,327...30,577,218
Ensembl chr 2:30,527,715...30,577,218
JBrowse link
G Prkce protein kinase C, epsilon ISO
ISS
(PMID:17603037)
GO_REF:0000024
RGD
UniProt
PMID:17603037 GO_REF:0000024 NCBI chr 6:9,483,400...9,973,396
Ensembl chr 6:9,790,422...9,973,396
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:16515909 RGD:10043388 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO
IEA
(PMID:26763945)
GO_REF:0000107
RGD
Ensembl
PMID:26763945 GO_REF:0000107 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Reg3a regenerating islet-derived 3 alpha IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5488867|PMID:22727489)
Ensembl
UniProt
RGD
PMID:22727489 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5488867 NCBI chr 4:109,477,893...109,480,659
Ensembl chr 4:109,477,920...109,480,659
JBrowse link
G Reg3g regenerating family member 3 gamma ISO
ISS
(MGI:MGI:5488867|PMID:22727489)
GO_REF:0000024
RGD
UniProt
PMID:22727489 GO_REF:0000024, MGI:MGI:5488867 NCBI chr 4:109,529,679...109,532,234
Ensembl chr 4:109,529,679...109,532,234
JBrowse link
activation of blood coagulation via clotting cascade term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 ISO (PMID:21107324) RGD PMID:21107324 NCBI chr 7:137,142,063...137,335,208
Ensembl chr 7:137,142,170...137,335,208
JBrowse link
canonical Wnt signaling pathway involved in positive regulation of wound healing term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plpp3 phospholipid phosphatase 3 ISO
IEA
(PMID:20123964)
GO_REF:0000107
RGD
Ensembl
PMID:20123964 GO_REF:0000107 NCBI chr 5:124,690,214...124,765,499
Ensembl chr 5:124,690,214...124,765,498
JBrowse link
negative regulation of fibrinolysis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoh apolipoprotein H ISO
IEA
(PMID:14726399)
GO_REF:0000107
RGD
Ensembl
PMID:14726399 GO_REF:0000107 NCBI chr10:96,640,013...96,653,939
Ensembl chr10:96,639,924...96,653,938
JBrowse link
G Cpb2 carboxypeptidase B2 IDA RGD PMID:17002650 RGD:2313647 NCBI chr15:57,290,849...57,339,762
Ensembl chr15:57,290,849...57,339,760
JBrowse link
G Hrg histidine-rich glycoprotein ISO
IBA
MGI:MGI:3789962 (MGI:MGI:3789419|PMID:15869579)
PMID:21873635
RGD PMID:15869579, PMID:21873635 MGI:MGI:3789419, RGD:13792537 NCBI chr11:81,621,274...81,639,938
Ensembl chr11:81,621,283...81,639,952
JBrowse link
G LOC681544 similar to histidine-rich glycoprotein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:81,621,283...81,639,952 JBrowse link
G Plg plasminogen ISO (PMID:14726399) RGD PMID:14726399 NCBI chr 1:48,521,828...48,563,895
Ensembl chr 1:48,521,772...48,563,776
JBrowse link
G Serpine1 serpin family E member 1 ISO
IEA
(PMID:2503541)
GO_REF:0000107
RGD
Ensembl
PMID:2503541 GO_REF:0000107 NCBI chr12:22,641,104...22,651,482
Ensembl chr12:22,641,104...22,651,482
JBrowse link
G Serpinf2 serpin family F member 2 IMP
ISO
(PMID:134998) RGD PMID:134998, PMID:6506034 RGD:1625541 NCBI chr10:62,264,247...62,272,353
Ensembl chr10:62,264,788...62,273,119
JBrowse link
G Thbs1 thrombospondin 1 ISO (PMID:6438154) RGD PMID:6438154 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
phosphatidylserine exposure on blood platelet term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 ISO (PMID:21107324) RGD PMID:21107324 NCBI chr 7:137,142,063...137,335,208
Ensembl chr 7:137,142,170...137,335,208
JBrowse link
positive regulation of blood coagulation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule ISO (MGI:MGI:4850200|PMID:20978343) RGD PMID:20978343 MGI:MGI:4850200 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Dmtn dematin actin binding protein ISO (MGI:MGI:5465511|PMID:23060452) RGD PMID:23060452 MGI:MGI:5465511 NCBI chr15:52,292,762...52,320,385
Ensembl chr15:52,292,765...52,320,385
JBrowse link
G Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 ISO (PMID:22995898) RGD PMID:22995898 NCBI chr 9:19,446,807...19,457,946
Ensembl chr 9:19,448,269...19,457,946
JBrowse link
G F12 coagulation factor XII ISO
IEA
(PMID:6793628)
GO_REF:0000107
RGD
Ensembl
PMID:6793628 GO_REF:0000107 NCBI chr17:9,736,577...9,744,420
Ensembl chr17:9,736,577...9,744,420
JBrowse link
G F2 coagulation factor II ISO
IBA
IEA
IMP
(PMID:9038223)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:9038223, PMID:21873635, PMID:20664909 GO_REF:0000107, RGD:13792537, RGD:10449431 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031
JBrowse link
G F2r coagulation factor II (thrombin) receptor ISO
IBA
IEA
ISS
MGI:MGI:3038377 (MGI:MGI:3784647|PMID:18305483)
PMID:21873635
GO_REF:0000107
GO_REF:0000024
(PMID:9038223)
RGD
Ensembl
UniProt
PMID:9038223, PMID:18305483, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3784647, RGD:13792537 NCBI chr 2:26,118,760...26,135,340
Ensembl chr 2:26,118,760...26,135,340
JBrowse link
G F7 coagulation factor VII IDA RGD PMID:12757778 RGD:2312295 NCBI chr16:81,824,610...81,834,923
Ensembl chr16:81,824,111...81,834,945
JBrowse link
G Hpse heparanase IEA
ISO
GO_REF:0000107
(PMID:20634491)
Ensembl
RGD
PMID:20634491 GO_REF:0000107 NCBI chr14:10,534,358...10,576,686
Ensembl chr14:10,534,423...10,575,224
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 ISO (MGI:MGI:4850200|PMID:20978343) RGD PMID:20978343 MGI:MGI:4850200 NCBI chr 3:62,497,568...62,525,146
Ensembl chr 3:62,497,571...62,524,996
JBrowse link
G Prdx2 peroxiredoxin 2 ISO
IEA
(MGI:MGI:4850200|PMID:20978343)
GO_REF:0000107
RGD
Ensembl
PMID:20978343 GO_REF:0000107, MGI:MGI:4850200 NCBI chr19:26,084,816...26,090,095
Ensembl chr19:26,084,903...26,090,094
JBrowse link
G S100a9 S100 calcium binding protein A9 ISO (MGI:MGI:5582990|PMID:24691441) RGD PMID:24691441 MGI:MGI:5582990 NCBI chr 2:190,097,436...190,100,209
Ensembl chr 2:190,097,554...190,100,276
JBrowse link
G Serpine1 serpin family E member 1 ISO (PMID:9207454) RGD PMID:9207454 NCBI chr12:22,641,104...22,651,482
Ensembl chr12:22,641,104...22,651,482
JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:36,264,741...36,314,811
Ensembl chr 8:36,264,750...36,314,811
JBrowse link
G Tbxa2r thromboxane A2 receptor IMP RGD PMID:7848332 RGD:11059887 NCBI chr 7:11,253,153...11,259,233
Ensembl chr 7:11,253,180...11,257,977
JBrowse link
G Thbs1 thrombospondin 1 ISO (PMID:3997886) RGD PMID:3997886 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
positive regulation of vascular wound healing term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:24955809 RGD:11352686 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
JBrowse link
G Foxc2 forkhead box C2 ISO (MGI:MGI:3813419|PMID:18579532) RGD PMID:18579532 MGI:MGI:3813419 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 ISO (PMID:16774925) RGD PMID:16774925 NCBI chr 1:56,242,289...56,374,106
Ensembl chr 1:56,242,346...56,374,120
JBrowse link
G Vegfb vascular endothelial growth factor B ISO (PMID:16109918) RGD PMID:16109918 NCBI chr 1:222,237,000...222,242,786
Ensembl chr 1:222,239,022...222,242,644
JBrowse link
G Xbp1 X-box binding protein 1 ISO (PMID:25656649) RGD PMID:25656649 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
positive regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fermt1 fermitin family member 1 ISO UniProtKB:Q96AC1 (PMID:21356350) RGD PMID:21356350 NCBI chr 3:125,566,744...125,607,864
Ensembl chr 3:125,566,643...125,607,735
JBrowse link
G Fermt2 fermitin family member 2 ISO (PMID:21356350) RGD PMID:21356350 NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Rreb1 ras responsive element binding protein 1 ISO (PMID:18394891) RGD PMID:18394891 NCBI chr17:27,539,137...27,718,878
Ensembl chr17:27,539,133...27,665,266
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20022
    response to stimulus 10575
      positive regulation of response to stimulus 2324
        positive regulation of response to wounding 77
          positive regulation of wound healing 58
            canonical Wnt signaling pathway involved in positive regulation of wound healing 1
            positive regulation of blood coagulation + 22
            positive regulation of vascular wound healing 5
            positive regulation of wound healing, spreading of epidermal cells 4
Path 2
Term Annotations click to browse term
  biological_process 20022
    biological regulation 13767
      regulation of biological process 13069
        regulation of response to stimulus 3995
          regulation of response to stress 1332
            regulation of response to wounding 171
              positive regulation of response to wounding 77
                positive regulation of wound healing 58
                  canonical Wnt signaling pathway involved in positive regulation of wound healing 1
                  positive regulation of blood coagulation + 22
                  positive regulation of vascular wound healing 5
                  positive regulation of wound healing, spreading of epidermal cells 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.