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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of wound healing
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Accession:GO:0090303 term browser browse the term
Definition:Any process that increases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.



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positive regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 involved_in ISO (PMID:25705373) RGD PMID:25705373 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
JBrowse link
G Adra2a adrenoceptor alpha 2A involved_in ISO (PMID:17655843) RGD PMID:17655843 NCBI chr 1:253,061,480...253,064,280
Ensembl chr 1:253,060,218...253,064,365
JBrowse link
G Anxa1 annexin A1 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:25664854)
UniProt
RGD
PMID:25664854 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
JBrowse link
G Arfgef1 ADP ribosylation factor guanine nucleotide exchange factor 1 involved_in ISO
ISS
(PMID:22084092)
GO_REF:0000024
RGD
UniProt
PMID:22084092 GO_REF:0000024 NCBI chr 5:8,982,061...9,076,326
Ensembl chr 5:8,981,540...9,076,326
JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO (PMID:23389627) RGD PMID:23389627 NCBI chr 2:174,061,126...174,118,355
Ensembl chr 2:174,062,976...174,118,355
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IMP RGD PMID:12831234 RGD:11526146 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Ccn4 cellular communication network factor 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:6196779|PMID:29330021)
Ensembl
RGD
PMID:29330021 GO_REF:0000107 MGI:6196779 NCBI chr 7:98,645,238...98,677,253
Ensembl chr 7:98,645,182...98,677,248
JBrowse link
G Cldn1 claudin 1 involved_in ISO (PMID:28412298) RGD PMID:28412298 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:16103090) RGD PMID:16103090 NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001
JBrowse link
G Cldn4 claudin 4 involved_in ISO (PMID:16103090) RGD PMID:16103090 NCBI chr12:21,751,638...21,753,436
Ensembl chr12:21,751,331...21,753,436
JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in IBA
ISO
PMID:21873635
(PMID:24721111)
RGD PMID:24721111 PMID:21873635 RGD:13792537 NCBI chr 4:162,902,731...162,913,931
Ensembl chr 4:162,902,732...162,913,897
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 IMP RGD PMID:26674152 RGD:11554781 NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
JBrowse link
G Dmtn dematin actin binding protein involved_in ISO (MGI:3803395|PMID:18505823) RGD PMID:18505823 MGI:3803395 NCBI chr15:45,677,974...45,705,601
Ensembl chr15:45,677,977...45,705,601
JBrowse link
G Duox1 dual oxidase 1 involved_in ISO
IEA
UniProtKB:Q1HG43-2 (PMID:19339556)
GO_REF:0000107
RGD
Ensembl
PMID:19339556 GO_REF:0000107 NCBI chr 3:109,260,526...109,295,588
Ensembl chr 3:109,262,397...109,295,563
JBrowse link
G Duox2 dual oxidase 2 involved_in ISO UniProtKB:Q1HG44 (PMID:19339556) RGD PMID:19339556 NCBI chr 3:109,223,809...109,247,023
Ensembl chr 3:109,226,924...109,245,902
JBrowse link
G Hbegf heparin-binding EGF-like growth factor involved_in ISO (PMID:17655843) RGD PMID:17655843 NCBI chr18:28,106,284...28,116,167
Ensembl chr18:28,105,760...28,116,441
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:3760906|PMID:16365390) RGD PMID:16365390 MGI:3760906 NCBI chr12:5,973,062...5,978,565 JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:23027131) RGD PMID:23027131 NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
JBrowse link
G Insl3 insulin-like 3 involved_in ISO (PMID:23539510) RGD PMID:23539510 NCBI chr16:18,398,682...18,400,566
Ensembl chr16:18,384,829...18,400,560
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO
IEA
(PMID:26763945)
GO_REF:0000107
RGD
Ensembl
PMID:26763945 GO_REF:0000107 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Jak3 Janus kinase 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536
JBrowse link
G Kank1 KN motif and ankyrin repeat domains 1 involved_in ISO (PMID:22084092) RGD PMID:22084092 NCBI chr 1:222,877,962...223,074,514
Ensembl chr 1:222,877,622...223,074,514
JBrowse link
G Mir21 microRNA 21 IMP RGD PMID:27798620 RGD:41404703 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mylk myosin light chain kinase involved_in ISO (PMID:15825080) RGD PMID:15825080 NCBI chr11:65,783,008...66,030,239
Ensembl chr11:65,783,008...66,030,261
JBrowse link
G Ocln occludin involved_in ISO (PMID:20152177) RGD PMID:20152177 NCBI chr 2:31,657,217...31,707,466
Ensembl chr 2:31,657,220...31,764,150
JBrowse link
G Prkce protein kinase C, epsilon involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17603037)
UniProt
Ensembl
RGD
PMID:17603037 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:7,965,048...8,451,966
Ensembl chr 6:7,965,048...8,451,719
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:16515909 RGD:10043388 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO
IEA
(PMID:26763945)
GO_REF:0000107
RGD
Ensembl
PMID:26763945 GO_REF:0000107 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Reg3a regenerating islet-derived 3 alpha involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5488867|PMID:22727489)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22727489 GO_REF:0000024 GO_REF:0000107 MGI:5488867 NCBI chr 4:110,872,398...110,875,157
Ensembl chr 4:110,872,425...110,875,157
JBrowse link
G Reg3g regenerating family member 3 gamma involved_in ISS
ISO
GO_REF:0000024
(MGI:5488867|PMID:22727489)
UniProt
RGD
PMID:22727489 GO_REF:0000024 MGI:5488867 NCBI chr 4:110,922,805...110,927,803
Ensembl chr 4:110,924,168...110,926,723
JBrowse link
activation of blood coagulation via clotting cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 involved_in ISO (PMID:21107324) RGD PMID:21107324 NCBI chr 7:126,933,629...127,113,589
Ensembl chr 7:126,933,936...127,113,589
JBrowse link
canonical Wnt signaling pathway involved in positive regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plpp3 phospholipid phosphatase 3 involved_in ISO (PMID:20123964) RGD PMID:20123964 NCBI chr 5:119,927,085...120,002,206
Ensembl chr 5:119,927,085...120,002,205
JBrowse link
negative regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoh apolipoprotein H involved_in ISO
IEA
(PMID:14726399)
GO_REF:0000107
RGD
Ensembl
PMID:14726399 GO_REF:0000107 NCBI chr10:93,342,435...93,356,334
Ensembl chr10:93,310,977...93,356,329
JBrowse link
G Cpb2 carboxypeptidase B2 IDA RGD PMID:17002650 RGD:2313647 NCBI chr15:50,557,722...50,606,569
Ensembl chr15:50,557,717...50,606,556
JBrowse link
G Hrg histidine-rich glycoprotein involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3789962 (MGI:3789419|PMID:15869579)
RGD PMID:15869579 PMID:21873635 MGI:3789419, RGD:13792537 NCBI chr11:78,054,488...78,069,402
Ensembl chr11:78,054,498...78,069,389
JBrowse link
G LOC681544 similar to histidine-rich glycoprotein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:78,039,371...78,049,353
Ensembl chr11:78,039,376...78,049,353
JBrowse link
G Plg plasminogen involved_in ISO (PMID:14726399) RGD PMID:14726399 NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786
JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO
IEA
(PMID:2503541)
GO_REF:0000107
RGD
Ensembl
PMID:2503541 GO_REF:0000107 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Serpinf2 serpin family F member 2 involved_in IMP
ISO
(PMID:134998) RGD PMID:134998 PMID:6506034 RGD:1625541 NCBI chr10:60,272,400...60,280,506
Ensembl chr10:60,272,400...60,281,243
JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:6438154) RGD PMID:6438154 NCBI chr 3:105,056,286...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
phosphatidylserine exposure on blood platelet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 involved_in ISO (PMID:21107324) RGD PMID:21107324 NCBI chr 7:126,933,629...127,113,589
Ensembl chr 7:126,933,936...127,113,589
JBrowse link
positive regulation of blood coagulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule involved_in ISO
IEA
(MGI:4850200|PMID:20978343)
GO_REF:0000107
RGD
Ensembl
PMID:20978343 GO_REF:0000107 MGI:4850200 NCBI chr 4:17,317,343...17,410,084 JBrowse link
G Dmtn dematin actin binding protein involved_in ISO (MGI:5465511|PMID:23060452) RGD PMID:23060452 MGI:5465511 NCBI chr15:45,677,974...45,705,601
Ensembl chr15:45,677,977...45,705,601
JBrowse link
G Emilin2 elastin microfibril interfacer 2 involved_in ISO
IEA
(MGI:5698770|PMID:25658937)
GO_REF:0000107
RGD
Ensembl
PMID:25658937 GO_REF:0000107 MGI:5698770 NCBI chr 9:111,160,708...111,220,463
Ensembl chr 9:111,160,712...111,220,352
JBrowse link
G Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 involved_in ISO (PMID:22995898) RGD PMID:22995898 NCBI chr 9:16,888,923...16,898,860
Ensembl chr 9:16,887,739...16,898,860
JBrowse link
G F12 coagulation factor XII involved_in IEA
ISO
GO_REF:0000107
(PMID:6793628)
Ensembl
RGD
PMID:6793628 GO_REF:0000107 NCBI chr17:9,207,683...9,215,530
Ensembl chr17:9,207,683...9,215,530
JBrowse link
G F2 coagulation factor II involved_in IMP
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:9038223)
Ensembl
RGD
PMID:9038223 PMID:20664909 PMID:21873635 GO_REF:0000107, RGD:10449431, RGD:13792537 NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486
JBrowse link
G F2r coagulation factor II (thrombin) receptor involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
IBA
GO_REF:0000107
MGI:3038377 (MGI:3784647|PMID:18305483)
GO_REF:0000024
(PMID:9038223)
PMID:21873635
Ensembl
RGD
UniProt
PMID:9038223 PMID:18305483 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3784647, RGD:13792537 NCBI chr 2:26,869,343...26,885,856
Ensembl chr 2:26,868,404...26,885,870
JBrowse link
G F7 coagulation factor VII IDA RGD PMID:12757778 RGD:2312295 NCBI chr16:76,489,779...76,500,636
Ensembl chr16:76,489,717...76,500,610
JBrowse link
G Hpse heparanase involved_in ISO
IEA
(PMID:20634491)
GO_REF:0000107
RGD
Ensembl
PMID:20634491 GO_REF:0000107 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (MGI:4850200|PMID:20978343) RGD PMID:20978343 MGI:4850200 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Prdx2 peroxiredoxin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:4850200|PMID:20978343)
Ensembl
RGD
PMID:20978343 GO_REF:0000107 MGI:4850200 NCBI chr19:23,180,927...23,186,217
Ensembl chr19:23,180,930...23,186,194
JBrowse link
G RGD1565355 similar to fatty acid translocase/CD36 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:17,424,749...17,465,808
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in ISO (MGI:5582990|PMID:24691441) RGD PMID:24691441 MGI:5582990 NCBI chr 2:176,190,361...176,193,182
Ensembl chr 2:176,190,361...176,193,230
JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO (PMID:9207454) RGD PMID:9207454 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:2447421|PMID:12097641)
UniProt
RGD
PMID:12097641 GO_REF:0000024 MGI:2447421 NCBI chr 8:33,415,666...33,465,365
Ensembl chr 8:33,415,671...33,524,389
JBrowse link
G Tbxa2r thromboxane A2 receptor IMP RGD PMID:7848332 RGD:11059887 NCBI chr 7:8,383,347...8,390,753
Ensembl chr 7:8,383,378...8,388,176
JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:3997886) RGD PMID:3997886 NCBI chr 3:105,056,286...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
positive regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:24955809 RGD:11352686 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Foxc2 forkhead box C2 involved_in ISO (MGI:3813419|PMID:18579532) RGD PMID:18579532 MGI:3813419 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in ISO (PMID:16774925) RGD PMID:16774925 NCBI chr 1:55,262,472...55,391,804
Ensembl chr 1:55,262,530...55,391,693
JBrowse link
G Vegfb vascular endothelial growth factor B involved_in ISO (PMID:16109918) RGD PMID:16109918 NCBI chr 1:204,172,297...204,178,046
Ensembl chr 1:204,172,225...204,177,944
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO
IEA
(PMID:25656649)
GO_REF:0000107
RGD
Ensembl
PMID:25656649 GO_REF:0000107 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
positive regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fermt1 FERM domain containing kindlin 1 involved_in ISO UniProtKB:Q96AC1 (PMID:21356350) RGD PMID:21356350 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:21356350) RGD PMID:21356350 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Rreb1 ras responsive element binding protein 1 involved_in ISO (PMID:18394891) RGD PMID:18394891 NCBI chr17:26,876,686...27,002,615
Ensembl chr17:26,876,697...27,002,615
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19541
    response to stimulus 10453
      positive regulation of response to stimulus 2366
        positive regulation of response to wounding 82
          positive regulation of wound healing 63
            canonical Wnt signaling pathway involved in positive regulation of wound healing 1
            positive regulation of blood coagulation + 24
            positive regulation of vascular wound healing 5
            positive regulation of wound healing, spreading of epidermal cells 4
Path 2
Term Annotations click to browse term
  biological_process 19541
    biological regulation 13630
      regulation of biological process 12890
        regulation of response to stimulus 4073
          regulation of response to stress 1390
            regulation of response to wounding 179
              positive regulation of response to wounding 82
                positive regulation of wound healing 63
                  canonical Wnt signaling pathway involved in positive regulation of wound healing 1
                  positive regulation of blood coagulation + 24
                  positive regulation of vascular wound healing 5
                  positive regulation of wound healing, spreading of epidermal cells 4
paths to the root