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Pathways

ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of kidney development
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Accession:GO:0090183 term browser browse the term
Definition:Any process that modulates the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.
Synonyms:related_synonym: regulation of nephrogenesis



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regulation of kidney development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmi1 BMI1 proto-oncogene, polycomb ring finger IEP RGD PMID:18467665 RGD:155631277 NCBI chr17:86,240,683...86,250,044
Ensembl chr17:86,243,491...86,250,024
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 IEP RGD PMID:18467665 RGD:155631277 NCBI chr  X:71,390,328...71,395,023
Ensembl chr  X:71,390,331...71,393,649
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit IEP RGD PMID:18467665 RGD:155631277 NCBI chr 4:77,624,223...77,698,598
Ensembl chr 4:77,624,223...77,687,183
JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
(PMID:15634693)
MGI:102780 (PMID:21281623)
(PMID:12141440)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12141440 PMID:15634693 PMID:21281623 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:22,098,470...22,105,172
JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:22194864)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22194864 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:98,037,620...98,039,320
Ensembl chr 4:98,033,251...98,039,323
JBrowse link
negative regulation of glomerulus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:12141440)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:12141440 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:22,098,470...22,105,172
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO
IEA
MGI:1857856 (PMID:20040500)
GO_REF:0000107
RGD
Ensembl
PMID:20040500 GO_REF:0000107 NCBI chr10:69,233,377...69,287,360
Ensembl chr10:69,233,131...69,287,361
JBrowse link
negative regulation of metanephric mesenchymal cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISS
ISO
GO_REF:0000024
(PMID:19460854)
UniProt
RGD
PMID:19460854 GO_REF:0000024 NCBI chr11:91,226,524...91,240,244
Ensembl chr11:91,226,180...91,240,169
JBrowse link
negative regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:16790474)
UniProt
Ensembl
RGD
PMID:16790474 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:38,093,011...38,100,021
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in ISO
IEA
(PMID:18607644)
GO_REF:0000107
RGD
Ensembl
PMID:18607644 GO_REF:0000107 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:69,421,638...69,446,944
JBrowse link
G Agtr1a angiotensin II receptor, type 1a involved_in IMP
IEA
PMID:17537984
GO_REF:0000117
UniProt PMID:17537984 GO_REF:0000117, RGD:1643596 NCBI chr17:34,383,397...34,435,523
Ensembl chr17:34,381,467...34,435,660
JBrowse link
G Agtr1b angiotensin II receptor, type 1b involved_in IMP
IEA
PMID:17537984
GO_REF:0000117
UniProt PMID:17537984 GO_REF:0000117, RGD:1643596 NCBI chr 2:104,774,005...104,849,262
Ensembl chr 2:104,773,930...104,849,310
JBrowse link
G Agtr2 angiotensin II receptor, type 2 involved_in IMP
ISO
IEA
PMID:17537984
(PMID:18607644)
GO_REF:0000117
RGD
UniProt
PMID:18607644 PMID:17537984 GO_REF:0000117, RGD:1643596 NCBI chr  X:116,914,320...116,918,504
Ensembl chr  X:116,913,656...116,918,745
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:22,098,470...22,105,172
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in IMP
IEA
ISO
IBA
IDA
PMID:17537984
GO_REF:0000117
(PMID:17229286)
GO_REF:0000033
GO_REF:0000107
PMID:17522159
(PMID:17229286), (PMID:8657307)
UniProt
RGD
GO_Central
Ensembl
PMID:8657307 PMID:17229286 PMID:17537984 PMID:17522159 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:1643596, RGD:8656002 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:58,621,327...58,647,240
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within
involved_in
ISO MGI:88180 (PMID:17522159), (PMID:21281623) RGD PMID:17522159 PMID:21281623 NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:120,966,623...120,979,089
JBrowse link
G Hoxb7 homeo box B7 involved_in ISO
IEA
(PMID:17881463)
GO_REF:0000107
RGD
Ensembl
PMID:17881463 GO_REF:0000107 NCBI chr10:81,749,159...81,752,577
Ensembl chr10:81,749,097...81,752,550
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in ISO
IEA
(PMID:21523854)
GO_REF:0000107
RGD
Ensembl
PMID:21523854 GO_REF:0000107 NCBI chr 3:116,901,968...117,004,584
Ensembl chr 3:116,901,968...117,004,153
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:16216236)
UniProt
Ensembl
RGD
PMID:16216236 GO_REF:0000024 GO_REF:0000107 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,894,288...69,901,076
JBrowse link
G Maged1 MAGE family member D1 involved_in ISO
IEA
(PMID:19268530)
GO_REF:0000107
RGD
Ensembl
PMID:19268530 GO_REF:0000107 NCBI chr  X:63,416,464...63,423,167
Ensembl chr  X:63,416,466...63,423,112
JBrowse link
G Nog noggin involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:12141440), (PMID:17522159)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12141440 PMID:17522159 GO_REF:0000024 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,625,875...74,628,103
JBrowse link
G Pax2 paired box 2 involved_in ISO (PMID:17314325), (PMID:17881463) RGD PMID:17314325 PMID:17881463 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:253,555,418...253,645,438
JBrowse link
G Pax8 paired box 8 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17314325)
UniProt
Ensembl
RGD
PMID:17314325 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:27,584,002...27,640,631
JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:3603818 (PMID:24550112) RGD PMID:24550112 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:34,181,078...34,196,278
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:88180 (PMID:21281623)
GO_REF:0000107
(PMID:17300925)
RGD
Ensembl
PMID:17300925 PMID:21281623 GO_REF:0000107 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:97,482,617...97,487,853
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (PMID:17300925) RGD PMID:17300925 NCBI chr 6:97,538,202...97,551,872
Ensembl chr 6:97,538,202...97,551,872
JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:16396903)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16396903 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:59,311,041...59,341,281
JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21212101)
UniProt
Ensembl
RGD
PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:15,089,357...15,094,345
Ensembl chr10:15,089,357...15,094,345
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21212101)
UniProt
Ensembl
RGD
PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:98,305,744...98,311,250
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:90,324,046...90,340,899
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:16291795) RGD PMID:16291795 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:22,439,392...22,468,194
JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within ISO
IEA
(PMID:11507767)
GO_REF:0000107
RGD
Ensembl
PMID:11507767 GO_REF:0000107 NCBI chr 2:195,142,573...195,156,945
Ensembl chr 2:195,135,176...195,157,144
JBrowse link
positive regulation of glomerulus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nog noggin involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:12141440)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:12141440 GO_REF:0000024 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,625,875...74,628,103
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha involved_in ISS
ISO
GO_REF:0000024
(PMID:15509543)
UniProt
RGD
PMID:15509543 GO_REF:0000024 NCBI chr 2:227,839,058...228,113,560
Ensembl chr 2:227,839,062...228,113,554
JBrowse link
positive regulation of kidney development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednra endothelin receptor type A IMP RGD PMID:19270827 RGD:4892573 NCBI chr19:47,137,360...47,207,961
Ensembl chr19:47,137,771...47,201,284
JBrowse link
G Foxd1 forkhead box D1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:15634693)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15634693 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:31,436,802...31,439,222
Ensembl chr 2:31,436,813...31,439,399
JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
UniProtKB:Q04887 (PMID:21212101)
UniProt
Ensembl
RGD
PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:15,089,357...15,094,345
Ensembl chr10:15,089,357...15,094,345
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
UniProtKB:Q04886 (PMID:21212101)
UniProt
Ensembl
RGD
PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:98,305,744...98,311,250
JBrowse link
positive regulation of metanephric cap mesenchymal cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISS
ISO
GO_REF:0000024
(PMID:19161241)
UniProt
RGD
PMID:19161241 GO_REF:0000024 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:95,483,105...95,488,028
JBrowse link
positive regulation of metanephric glomerulus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 involved_in ISO (PMID:18607644) RGD PMID:18607644 NCBI chr  X:116,914,320...116,918,504
Ensembl chr  X:116,913,656...116,918,745
JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:17047028)
UniProt
RGD
PMID:17047028 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:253,555,418...253,645,438
JBrowse link
G Ret ret proto-oncogene involved_in ISO
IEA
(PMID:17047028)
GO_REF:0000107
RGD
Ensembl
PMID:17047028 GO_REF:0000107 NCBI chr 4:152,998,344...153,040,556
Ensembl chr 4:152,998,812...153,040,556
JBrowse link
positive regulation of metanephric ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wt1 WT1 transcription factor involved_in ISS
ISO
GO_REF:0000024
(PMID:8395349)
UniProt
RGD
PMID:8395349 GO_REF:0000024 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:112,021,641...112,068,444
JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO
IEA
(PMID:19112489)
GO_REF:0000107
RGD
Ensembl
PMID:19112489 GO_REF:0000107 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:73,553,548...73,575,670
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:8657307)
UniProt
Ensembl
RGD
PMID:8657307 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:58,621,327...58,647,240
JBrowse link
G Six1 SIX homeobox 1 involved_in ISO
IEA
(PMID:17300925)
GO_REF:0000107
RGD
Ensembl
PMID:17300925 GO_REF:0000107 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:97,482,617...97,487,853
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (PMID:17300925) RGD PMID:17300925 NCBI chr 6:97,538,202...97,551,872
Ensembl chr 6:97,538,202...97,551,872
JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:22,098,470...22,105,172
JBrowse link
G Six1 SIX homeobox 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:97,482,617...97,487,853
JBrowse link
G Six2 SIX homeobox 2 involved_in ISO
IEA
(PMID:17036046)
GO_REF:0000117
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:17036046 GO_REF:0000107 GO_REF:0000117 NCBI chr 6:14,727,756...14,734,219
Ensembl chr 6:14,727,859...14,731,941
JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in IDA PMID:19112489 UniProt PMID:19112489 RGD:8656008 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:58,621,327...58,647,240
JBrowse link
renal vesicle induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox8 SRY-box transcription factor 8 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21212101)
UniProt
Ensembl
RGD
PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:15,089,357...15,094,345
Ensembl chr10:15,089,357...15,094,345
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21212101)
UniProt
Ensembl
RGD
PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:98,305,744...98,311,250
JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO
IEA
(PMID:11507767)
GO_REF:0000107
RGD
Ensembl
PMID:11507767 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:154,797,311...154,817,128
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20668
    developmental process 7294
      regulation of developmental process 2833
        regulation of kidney development 39
          negative regulation of kidney development + 4
          positive regulation of kidney development + 11
          regulation of branching involved in ureteric bud morphogenesis + 25
          regulation of glomerulus development + 6
          regulation of mesonephros development + 5
          regulation of metanephros development + 5
Path 2
Term Annotations click to browse term
  biological_process 20668
    developmental process 7294
      anatomical structure development 6777
        multicellular organism development 5422
          system development 4701
            renal system development 424
              kidney development 410
                regulation of kidney development 39
                  negative regulation of kidney development + 4
                  positive regulation of kidney development + 11
                  regulation of branching involved in ureteric bud morphogenesis + 25
                  regulation of glomerulus development + 6
                  regulation of mesonephros development + 5
                  regulation of metanephros development + 5
paths to the root