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ONTOLOGY REPORT - ANNOTATIONS

Term:establishment of epithelial cell polarity
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Accession:GO:0090162 term browser browse the term
Definition:The specification and formation of anisotropic intracellular organization of an epithelial cell.


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establishment of epithelial cell polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf6 ARF GTPase 6 acts_upstream_of_or_within ISO (PMID:20080746) RGD PMID:20080746 NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114 		JBrowse link
G Cyth1 cytohesin 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:20080746)		 UniProt
RGD		 PMID:20080746 GO_REF:0000024 NCBI chr10:103,402,727...103,485,826
Ensembl chr10:103,366,145...103,485,760 		JBrowse link
G Cyth3 cytohesin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:20080746)		 Ensembl
RGD		 PMID:20080746 GO_REF:0000107 NCBI chr12:10,840,137...10,933,792
Ensembl chr12:10,840,157...10,933,812 		JBrowse link
G Fbf1 Fas binding factor 1 involved_in ISO (PMID:18838552) RGD PMID:18838552 NCBI chr10:101,375,769...101,401,624
Ensembl chr10:101,375,775...101,401,644 		JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (PMID:17012746) RGD PMID:17012746 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555 		JBrowse link
G Frmd4a FERM domain containing 4A acts_upstream_of_or_within ISO MGI:2141794 (PMID:20080746) RGD PMID:20080746 NCBI chr17:73,667,787...74,258,487
Ensembl chr17:73,667,789...74,258,687 		JBrowse link
G Frmd4b FERM domain containing 4B acts_upstream_of_or_within ISO MGI:1919850 (PMID:20080746) RGD PMID:20080746 NCBI chr 4:129,895,401...130,222,070
Ensembl chr 4:129,895,708...130,084,197 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104876|MGI:1341800 (PMID:21300049)		 Ensembl
RGD		 PMID:21300049 GO_REF:0000107 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO MGI:104853|MGI:1341800 (PMID:21300049) RGD PMID:21300049 NCBI chr 5:170,804,511...170,807,988
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:104853|MGI:104876 (PMID:21300049) RGD PMID:21300049 NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312 		JBrowse link
G Pard3 par-3 family cell polarity regulator involved_in IMP PMID:18082612
PMID:18550519		 UniProt PMID:18082612 PMID:18550519 RGD:8553352, RGD:8554471 NCBI chr19:55,080,282...55,630,111
Ensembl chr19:55,080,282...55,629,778 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16332353)		 Ensembl
RGD		 PMID:16332353 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Sipa1l3 signal-induced proliferation-associated 1 like 3 involved_in ISO
IBA
ISS		 (PMID:26231217)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:26231217 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:84,618,714...84,825,956
Ensembl chr 1:84,618,719...84,703,802 		JBrowse link
asymmetric Golgi ribbon formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Golph3 golgi phosphoprotein 3 involved_in ISO
IEA		 (PMID:19837035)
GO_REF:0000107		 RGD
Ensembl		 PMID:19837035 GO_REF:0000107 NCBI chr 2:61,348,030...61,376,051
Ensembl chr 2:61,348,030...61,376,049 		JBrowse link
G Myo18a myosin XVIIIa involved_in ISO
IEA		 (PMID:19837035)
GO_REF:0000107		 RGD
Ensembl		 PMID:19837035 GO_REF:0000107 NCBI chr10:62,654,218...62,755,465
Ensembl chr10:62,654,281...62,755,468 		JBrowse link
establishment of epithelial cell apical/basal polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 involved_in ISO (PMID:26715742), (PMID:27802168) RGD PMID:26715742 PMID:27802168 NCBI chr12:6,440,959...6,464,582
Ensembl chr12:1,643,251...1,666,685 		JBrowse link
G Cdc42 cell division cycle 42 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22891260)		 UniProt
RGD		 PMID:22891260 GO_REF:0000024 NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:149,553,724...149,593,111 		JBrowse link
G Ezr ezrin NOT|involved_in ISO (PMID:22797597), (PMID:24862762) RGD PMID:22797597 PMID:24862762 NCBI chr 1:49,373,033...49,416,573
Ensembl chr 1:46,967,658...47,011,505 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1347479 (PMID:16439479) RGD PMID:16439479 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738 		JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO MGI:3817268 (PMID:25605782) RGD PMID:25605782 NCBI chr10:63,930,629...63,936,174
Ensembl chr10:63,432,633...63,438,124 		JBrowse link
G Lama1 laminin subunit alpha 1 acts_upstream_of_or_within ISO MGI:3530455 (PMID:15668394) RGD PMID:15668394 NCBI chr 9:115,139,548...115,263,620
Ensembl chr 9:107,692,770...107,817,478 		JBrowse link
G Msn moesin involved_in ISO
IEA		 (PMID:24862762)
GO_REF:0000107		 RGD
Ensembl		 PMID:24862762 GO_REF:0000107 NCBI chr  X:65,005,546...65,073,512
Ensembl chr  X:60,995,951...61,065,628 		JBrowse link
G Myo9a myosin IXA involved_in IEA
IBA
ISO
ISS		 GO_REF:0000107
GO_REF:0000033
(PMID:22891260)
GO_REF:0000024		 Ensembl
GO_Central
RGD
UniProt		 PMID:22891260 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:60,149,234...60,352,330
Ensembl chr 8:60,149,234...60,350,514 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 involved_in ISO (PMID:24862762) RGD PMID:24862762 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598 		JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO
ISS		 (PMID:22891260)
GO_REF:0000024		 RGD
UniProt		 PMID:22891260 GO_REF:0000024 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633 		JBrowse link
G Ptk7 protein tyrosine kinase 7 acts_upstream_of_or_within ISO MGI:3046905 (PMID:15229603) RGD PMID:15229603 NCBI chr 9:14,352,155...14,418,473
Ensembl chr 9:14,351,202...14,418,494 		JBrowse link
G Rap2a RAP2A, member of RAS oncogene family NOT|involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr15:104,003,744...104,004,234
Ensembl chr15:97,596,020...97,624,138 		JBrowse link
G Rhoa ras homolog family member A involved_in ISO
IEA
ISS		 (PMID:22891260)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:22891260 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
G Sh3bp1 SH3-domain binding protein 1 involved_in ISO
ISS		 (PMID:22891260)
GO_REF:0000024		 RGD
UniProt		 PMID:22891260 GO_REF:0000024 NCBI chr 7:110,457,626...110,470,201
Ensembl chr 7:110,457,710...110,470,201 		JBrowse link
G Spag6l sperm associated antigen 6-like acts_upstream_of_or_within ISO MGI:2662475 (PMID:25333478) RGD PMID:25333478 NCBI chr11:97,677,840...97,773,580
Ensembl chr11:84,173,526...84,269,364 		JBrowse link
G Syne4 spectrin repeat containing nuclear envelope family member 4 involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:19164528)
GO_REF:0000033
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:19164528 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:85,569,409...85,573,775
Ensembl chr 1:85,569,545...85,573,760 		JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (PMID:24038871) RGD PMID:24038871 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO MGI:5140723 (PMID:25605782) RGD PMID:25605782 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101948 (PMID:25813538)		 Ensembl
RGD		 PMID:25813538 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat1 FAT atypical cadherin 1 involved_in ISO MGI:2662293 (PMID:26114487) RGD PMID:26114487 NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20546
    cellular process 19536
      establishment or maintenance of cell polarity 235
        establishment of cell polarity 168
          establishment of epithelial cell polarity 35
            asymmetric Golgi ribbon formation + 2
            establishment of epithelial cell apical/basal polarity + 20
            establishment of epithelial cell planar polarity 0
paths to the root