Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:establishment of epithelial cell polarity
go back to main search page
Accession:GO:0090162 term browser browse the term
Definition:The specification and formation of anisotropic intracellular organization of an epithelial cell.



show annotations for term's descendants           Sort by:
 
establishment of epithelial cell polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf6 ADP-ribosylation factor 6 acts_upstream_of_or_within ISO (MGI:4420836|PMID:20080746) RGD PMID:20080746 MGI:4420836 NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114
JBrowse link
G Cyth1 cytohesin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:4420836|PMID:20080746)
UniProt
RGD
PMID:20080746 GO_REF:0000024 MGI:4420836 NCBI chr10:103,402,727...103,485,826
Ensembl chr10:103,366,145...103,485,760
JBrowse link
G Cyth3 cytohesin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:4420836|PMID:20080746)
Ensembl
RGD
PMID:20080746 GO_REF:0000107 MGI:4420836 NCBI chr12:10,840,137...10,933,792
Ensembl chr12:10,840,157...10,933,812
JBrowse link
G Fbf1 Fas binding factor 1 involved_in ISO (PMID:18838552) RGD PMID:18838552 NCBI chr10:101,375,769...101,401,624
Ensembl chr10:101,375,775...101,401,644
JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (PMID:17012746) RGD PMID:17012746 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
JBrowse link
G Frmd4a FERM domain containing 4A acts_upstream_of_or_within ISO MGI:2141794 (MGI:4420836|PMID:20080746) RGD PMID:20080746 MGI:4420836 NCBI chr17:73,667,787...74,258,487 JBrowse link
G Frmd4b FERM domain containing 4B acts_upstream_of_or_within ISO MGI:1919850 (MGI:4420836|PMID:20080746) RGD PMID:20080746 MGI:4420836 NCBI chr 4:129,895,401...130,222,070
Ensembl chr 4:129,895,708...130,084,197
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104876|MGI:1341800 (MGI:4949990|PMID:21300049)
Ensembl
RGD
PMID:21300049 GO_REF:0000107 MGI:4949990 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO MGI:104853|MGI:1341800 (MGI:4949990|PMID:21300049) RGD PMID:21300049 MGI:4949990 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:104853|MGI:104876 (MGI:4949990|PMID:21300049) RGD PMID:21300049 MGI:4949990 NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
JBrowse link
G Pard3 par-3 family cell polarity regulator involved_in IMP PMID:18082612
PMID:18550519
UniProt PMID:18082612 PMID:18550519 RGD:8553352, RGD:8554471 NCBI chr19:55,080,282...55,630,111
Ensembl chr19:55,080,282...55,629,778
JBrowse link
G Sipa1l3 signal-induced proliferation-associated 1 like 3 involved_in ISO
IBA
ISS
(PMID:26231217)
(MGI:5697095|PMID:26231217)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:26231217 PMID:21873635 GO_REF:0000024 MGI:5697095, RGD:13792537 NCBI chr 1:84,618,714...84,825,956
Ensembl chr 1:84,618,719...84,703,802
JBrowse link
asymmetric Golgi ribbon formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Golph3 golgi phosphoprotein 3 involved_in ISO
IEA
(PMID:19837035)
GO_REF:0000107
RGD
Ensembl
PMID:19837035 GO_REF:0000107 NCBI chr 2:61,348,030...61,376,051
Ensembl chr 2:61,348,030...61,376,049
JBrowse link
G Myo18a myosin XVIIIa involved_in ISO
IEA
(PMID:19837035)
GO_REF:0000107
RGD
Ensembl
PMID:19837035 GO_REF:0000107 NCBI chr10:62,654,218...62,755,464
Ensembl chr10:62,654,281...62,755,468
JBrowse link
establishment of epithelial cell apical/basal polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 involved_in ISO (PMID:26715742), (PMID:27802168)
(MGI:5754645|PMID:26715742)
RGD PMID:26715742 PMID:27802168 MGI:5754645 NCBI chr12:1,643,062...1,666,685
Ensembl chr12:1,643,251...1,666,685
JBrowse link
G Cdc42 cell division cycle 42 involved_in ISS
ISO
GO_REF:0000024
(PMID:22891260)
UniProt
RGD
PMID:22891260 GO_REF:0000024 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Ezr ezrin NOT|involved_in ISO (PMID:22797597), (PMID:24862762) RGD PMID:22797597 PMID:24862762 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1347479 (MGI:3617131|PMID:16439479) RGD PMID:16439479 MGI:3617131 NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738
JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO MGI:3817268 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
JBrowse link
G Lama1 laminin subunit alpha 1 acts_upstream_of_or_within ISO MGI:3530455 (MGI:3529401|PMID:15668394) RGD PMID:15668394 MGI:3529401 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
JBrowse link
G Msn moesin involved_in ISO
IEA
(PMID:24862762)
GO_REF:0000107
RGD
Ensembl
PMID:24862762 GO_REF:0000107 NCBI chr  X:60,996,043...61,064,011
Ensembl chr  X:60,995,951...61,065,628
JBrowse link
G Myo9a myosin IXA involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:22891260)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22891260 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:60,149,234...60,348,726
Ensembl chr 8:60,149,234...60,350,514
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633
JBrowse link
G Ptk7 protein tyrosine kinase 7 acts_upstream_of_or_within ISO MGI:3046905 (MGI:3046397|PMID:15229603) RGD PMID:15229603 MGI:3046397 NCBI chr 9:14,352,155...14,418,494
Ensembl chr 9:14,351,202...14,418,494
JBrowse link
G Rap2a RAP2A, member of RAS oncogene family NOT|involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr15:97,596,848...97,597,338
Ensembl chr15:97,596,020...97,624,138
JBrowse link
G Rhoa ras homolog family member A involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Sh3bp1 SH3-domain binding protein 1 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 7:110,457,626...110,470,201
Ensembl chr 7:110,457,710...110,470,201
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 involved_in ISO (PMID:24862762) RGD PMID:24862762 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Spag6l sperm associated antigen 6-like acts_upstream_of_or_within ISO MGI:2662475 (MGI:5644628|PMID:25333478) RGD PMID:25333478 MGI:5644628 NCBI chr11:84,173,628...84,269,374
Ensembl chr11:84,173,526...84,269,364
JBrowse link
G Syne4 spectrin repeat containing nuclear envelope family member 4 involved_in ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000107
(MGI:4441244|PMID:19164528)
PMID:21873635
UniProt
Ensembl
RGD
PMID:19164528 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:4441244, RGD:13792537 NCBI chr 1:85,569,409...85,573,775
Ensembl chr 1:85,569,545...85,573,760
JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (MGI:5522599|PMID:24038871) RGD PMID:24038871 MGI:5522599 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO MGI:5140723 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418
JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101948 (MGI:5634837|PMID:25813538)
Ensembl
RGD
PMID:25813538 GO_REF:0000107 MGI:5634837 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat1 FAT atypical cadherin 1 involved_in ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    cellular process 18359
      establishment or maintenance of cell polarity 233
        establishment of cell polarity 152
          establishment of epithelial cell polarity 34
            asymmetric Golgi ribbon formation + 2
            establishment of epithelial cell apical/basal polarity + 20
            establishment of epithelial cell planar polarity 0
paths to the root