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ONTOLOGY REPORT - ANNOTATIONS


Term:establishment of epithelial cell polarity
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Accession:GO:0090162 term browser browse the term
Definition:The specification and formation of anisotropic intracellular organization of an epithelial cell.


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establishment of epithelial cell polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf6 ADP-ribosylation factor 6 ISO (MGI:4420836|PMID:20080746) RGD PMID:20080746 MGI:4420836 NCBI chr 6:91,697,109...91,698,257
Ensembl chr 6:91,697,109...91,698,255
JBrowse link
G Cyth1 cytohesin 1 ISS
ISO
GO_REF:0000024
(MGI:4420836|PMID:20080746)
UniProt
RGD
PMID:20080746 GO_REF:0000024 MGI:4420836 NCBI chr10:107,197,983...107,281,285
Ensembl chr10:107,197,989...107,281,235
JBrowse link
G Cyth3 cytohesin 3 IEA
ISO
GO_REF:0000107
(MGI:4420836|PMID:20080746)
Ensembl
RGD
PMID:20080746 GO_REF:0000107 MGI:4420836 NCBI chr12:12,877,559...12,907,771
Ensembl chr12:12,877,559...12,945,192
JBrowse link
G Fbf1 Fas binding factor 1 ISO (PMID:18838552) RGD PMID:18838552 NCBI chr10:104,692,791...104,718,630
Ensembl chr10:104,692,755...104,718,621
JBrowse link
G Fermt1 fermitin family member 1 ISO (PMID:17012746) RGD PMID:17012746 NCBI chr 3:125,566,744...125,607,864
Ensembl chr 3:125,566,643...125,607,735
JBrowse link
G Frmd4a FERM domain containing 4A ISO MGI:2141794 (MGI:4420836|PMID:20080746) RGD PMID:20080746 MGI:4420836 NCBI chr17:77,642,302...77,918,210 JBrowse link
G Frmd4b FERM domain containing 4B ISO MGI:1919850 (MGI:4420836|PMID:20080746) RGD PMID:20080746 MGI:4420836 NCBI chr 4:129,658,137...129,984,735
Ensembl chr 4:129,658,840...129,846,642
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEA
ISO
GO_REF:0000107
MGI:104876|MGI:1341800 (MGI:4949990|PMID:21300049)
Ensembl
RGD
PMID:21300049 GO_REF:0000107 MGI:4949990 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hes5 hes family bHLH transcription factor 5 ISO MGI:104853|MGI:1341800 (MGI:4949990|PMID:21300049) RGD PMID:21300049 MGI:4949990 NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 ISO MGI:104853|MGI:104876 (MGI:4949990|PMID:21300049) RGD PMID:21300049 MGI:4949990 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
G Mpp5 membrane palmitoylated protein 5 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:101,923,675...102,029,705
Ensembl chr 6:101,923,785...102,028,592
JBrowse link
G Pard3 par-3 family cell polarity regulator IMP PMID:18082612
PMID:18550519
UniProt PMID:18082612, PMID:18550519 RGD:8553352, RGD:8554471 NCBI chr19:60,017,746...60,580,628
Ensembl chr19:60,017,746...60,580,651
JBrowse link
G Sipa1l3 signal-induced proliferation-associated 1 like 3 ISO
ISS
(PMID:26231217)
(MGI:5697095|PMID:26231217)
GO_REF:0000024
RGD
UniProt
PMID:26231217 GO_REF:0000024 MGI:5697095 NCBI chr 1:87,260,832...87,467,846
Ensembl chr 1:87,260,835...87,468,288
JBrowse link
asymmetric Golgi ribbon formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Golph3 golgi phosphoprotein 3 ISO
IEA
(PMID:19837035)
GO_REF:0000107
RGD
Ensembl
PMID:19837035 GO_REF:0000107 NCBI chr 2:62,360,754...62,388,773
Ensembl chr 2:62,360,754...62,388,771
JBrowse link
G Myo18a myosin XVIIIa ISO
IEA
(PMID:19837035)
GO_REF:0000107
RGD
Ensembl
PMID:19837035 GO_REF:0000107 NCBI chr10:64,979,770...65,080,535
Ensembl chr10:64,979,770...65,080,535
JBrowse link
establishment of epithelial cell apical/basal polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 ISO (PMID:26715742), (PMID:27802168)
(MGI:5754645|PMID:26715742)
RGD PMID:26715742 PMID:27802168 MGI:5754645 NCBI chr12:2,133,935...2,157,403
Ensembl chr12:2,134,022...2,157,403
JBrowse link
G Cdc42 cell division cycle 42 ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Ezr ezrin NOT ISO (PMID:22797597), (PMID:24862762) RGD PMID:22797597 PMID:24862762 NCBI chr 1:47,287,872...47,331,412
Ensembl chr 1:47,287,874...47,331,412
JBrowse link
G Foxf1 forkhead box F1 ISO MGI:1347479 (MGI:3617131|PMID:16439479) RGD PMID:16439479 MGI:3617131 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Ift20 intraflagellar transport 20 ISO MGI:3817268 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr10:65,805,808...65,811,353
Ensembl chr10:65,805,860...65,811,351
JBrowse link
G Lama1 laminin subunit alpha 1 ISO MGI:3530455 (MGI:3529401|PMID:15668394) RGD PMID:15668394 MGI:3529401 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G LOC108348128 nesprin-4 ISS
IBA
GO_REF:0000024
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:90,952,331...90,956,646
Ensembl chr 1:90,951,771...90,957,082
Ensembl chr 1:90,951,771...90,957,082
JBrowse link
G Msn moesin IEA
ISO
GO_REF:0000107
(PMID:24862762)
Ensembl
RGD
PMID:24862762 GO_REF:0000107 NCBI chr  X:65,226,834...65,294,192
Ensembl chr  X:65,226,748...65,295,810
JBrowse link
G Myo9a myosin IXA IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22891260)
Ensembl
UniProt
RGD
PMID:22891260 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:64,573,248...64,777,607
Ensembl chr 8:64,573,358...64,777,543
JBrowse link
G Ophn1 oligophrenin 1 ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr  X:68,185,865...68,579,518
Ensembl chr  X:68,189,161...68,563,137
JBrowse link
G Ptk7 protein tyrosine kinase 7 ISO MGI:3046905 (MGI:3046397|PMID:15229603) RGD PMID:15229603 MGI:3046397 NCBI chr 9:16,662,588...16,729,888
Ensembl chr 9:16,702,460...16,729,030
JBrowse link
G Rap2a RAP2A, member of RAS oncogene family NOT ISO (PMID:22797597) RGD PMID:22797597 NCBI chr15:105,851,543...105,852,033
Ensembl chr15:105,851,542...105,878,666
JBrowse link
G Rhoa ras homolog family member A ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Sh3bp1 SH3-domain binding protein 1 ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 7:120,125,747...120,138,148
Ensembl chr 7:120,125,633...120,138,196
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO (PMID:24862762) RGD PMID:24862762 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
G Spag6l sperm associated antigen 6-like ISO MGI:2662475 (MGI:5644628|PMID:25333478) RGD PMID:25333478 MGI:5644628 NCBI chr11:88,424,493...88,517,910
Ensembl chr11:88,424,414...88,508,601
JBrowse link
G Syne4 spectrin repeat containing nuclear envelope family member 4 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:4441244|PMID:19164528)
UniProt
RGD
PMID:19164528, PMID:21873635 GO_REF:0000024 MGI:4441244, RGD:13792537 NCBI chr 1:88,772,729...88,777,044
Ensembl chr 1:88,772,904...88,776,999
Ensembl chr 1:88,772,904...88,776,999
JBrowse link
G Tcf15 transcription factor 15 ISO MGI:1929775 (MGI:5522599|PMID:24038871) RGD PMID:24038871 MGI:5522599 NCBI chr 3:147,643,250...147,649,511
Ensembl chr 3:147,643,250...147,649,504
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 ISO MGI:5140723 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr 6:122,920,308...122,974,525
Ensembl chr 6:122,920,317...122,974,522
JBrowse link
G Wnt5a Wnt family member 5A IEA
ISO
GO_REF:0000107
MGI:101948 (MGI:5634837|PMID:25813538)
Ensembl
RGD
PMID:25813538 GO_REF:0000107 MGI:5634837 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat1 FAT atypical cadherin 1 ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:50,372,150...50,501,716
Ensembl chr16:50,372,128...50,501,921
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    cellular process 18802
      establishment or maintenance of cell polarity 233
        establishment of cell polarity 149
          establishment of epithelial cell polarity 36
            asymmetric Golgi ribbon formation + 2
            establishment of epithelial cell apical/basal polarity + 21
            establishment of epithelial cell planar polarity 0
paths to the root