ONTOLOGY REPORT - ANNOTATIONS
Term: regulation of sphingolipid biosynthetic process
Accession: GO:0090153
browse the term
Definition: Any process that modulates the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).
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Ormdl1
ORMDL sphingolipid biosynthesis regulator 1
acts_upstream_of
ISO
MGI:1913862 (MGI:6393026|PMID:31880535)
RGD
PMID:31880535
MGI:6393026
NCBI chr 9:53,110,628...53,120,454
Ensembl chr 9:53,111,371...53,118,613
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Ormdl3
ORMDL sphingolipid biosynthesis regulator 3
acts_upstream_of
ISO
MGI:2137691|MGI:2181669|MGI:2445707|MGI:6343506|MGI:6382064 (MGI:5926671|PMID:28275141), (MGI:6393026|PMID:31880535)
RGD
PMID:28275141 PMID:31880535
MGI:5926671 MGI:6393026
NCBI chr10:86,545,910...86,554,478
Ensembl chr10:86,547,339...86,554,478
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Ormdl1
ORMDL sphingolipid biosynthesis regulator 1
involved_in
IBA ISO
PMID:21873635 (PMID:25691431)
RGD
PMID:25691431 , PMID:21873635
RGD:13792537
NCBI chr 9:53,110,628...53,120,454
Ensembl chr 9:53,111,371...53,118,613
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Ormdl2
ORMDL sphingolipid biosynthesis regulator 2
involved_in
ISO IBA
(PMID:25691431) PMID:21873635
RGD
PMID:25691431 , PMID:21873635
RGD:13792537
NCBI chr 7:3,242,991...3,246,085
Ensembl chr 7:3,242,991...3,246,071
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Ormdl3
ORMDL sphingolipid biosynthesis regulator 3
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 (MGI:5638294|PMID:25691431) PMID:21873635 (PMID:25691431)
Ensembl RGD
PMID:25691431 , PMID:21873635
GO_REF:0000107 MGI:5638294 , RGD:13792537
NCBI chr10:86,545,910...86,554,478
Ensembl chr10:86,547,339...86,554,478
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Sphk1
sphingosine kinase 1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:6294167|PMID:16118219) (PMID:16118219) GO_REF:0000107
UniProt RGD Ensembl
PMID:16118219
GO_REF:0000024 GO_REF:0000107 MGI:6294167
NCBI chr10:105,498,728...105,504,401
Ensembl chr10:105,498,728...105,504,393
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Abca2
ATP binding cassette subfamily A member 2
involved_in
ISO IMP
(PMID:24201375)
RGD
PMID:24201375 , PMID:24201375
RGD:14697729
NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
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Atg7
autophagy related 7
acts_upstream_of_or_within
ISO
MGI:2176073|MGI:3587769 (MGI:5613260|PMID:25332431)
RGD
PMID:25332431
MGI:5613260
NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
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Ccn1
cellular communication network factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:3849354|PMID:19364818)
Ensembl RGD
PMID:19364818
GO_REF:0000107 MGI:3849354
NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312
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Enpp7
ectonucleotide pyrophosphatase/phosphodiesterase 7
involved_in
ISS ISO
GO_REF:0000024 (MGI:4947032|PMID:21177474)
UniProt RGD
PMID:21177474
GO_REF:0000024 MGI:4947032
NCBI chr10:108,095,131...108,099,483
Ensembl chr10:108,095,131...108,099,483
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Pla2g6
phospholipase A2 group VI
IDA
RGD
PMID:18936091
RGD:6482750
NCBI chr 7:120,519,479...120,559,716
Ensembl chr 7:120,519,467...120,559,347
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Prkcd
protein kinase C, delta
involved_in
ISO IEA
(PMID:19279011) GO_REF:0000107
RGD Ensembl
PMID:19279011
GO_REF:0000107
NCBI chr16:6,655,131...6,675,746
Ensembl chr16:6,655,120...6,675,746
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Sirt3
sirtuin 3
involved_in
ISO
(MGI:5755322|PMID:26620563)
RGD
PMID:26620563
MGI:5755322
NCBI chr 1:213,613,502...213,636,061
Ensembl chr 1:213,613,513...213,635,546
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Smpd3
sphingomyelin phosphodiesterase 3
IMP
RGD
PMID:20096352
RGD:10041064
NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
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Sphk2
sphingosine kinase 2
involved_in
ISO
(PMID:16118219) (MGI:6294167|PMID:16118219)
RGD
PMID:16118219
MGI:6294167
NCBI chr 1:101,692,972...101,700,604
Ensembl chr 1:101,692,973...101,697,277
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Ormdl1
ORMDL sphingolipid biosynthesis regulator 1
acts_upstream_of
ISO
MGI:1913862 (MGI:6393026|PMID:31880535)
RGD
PMID:31880535
MGI:6393026
NCBI chr 9:53,110,628...53,120,454
Ensembl chr 9:53,111,371...53,118,613
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Ormdl3
ORMDL sphingolipid biosynthesis regulator 3
acts_upstream_of
ISO
MGI:2137691|MGI:2181669|MGI:6382064 (MGI:6393026|PMID:31880535)
RGD
PMID:31880535
MGI:6393026
NCBI chr10:86,545,910...86,554,478
Ensembl chr10:86,547,339...86,554,478
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Prkcd
protein kinase C, delta
involved_in
ISO ISS
(PMID:17303575) GO_REF:0000024
RGD UniProt
PMID:17303575
GO_REF:0000024
NCBI chr16:6,655,131...6,675,746
Ensembl chr16:6,655,120...6,675,746
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Samd8
sterile alpha motif domain containing 8
involved_in
ISO
(PMID:19506037)
RGD
PMID:19506037
NCBI chr15:2,685,504...2,731,062
Ensembl chr15:2,685,511...2,731,462
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