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ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle-mediated cholesterol transport
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Accession:GO:0090119 term browser browse the term
Definition:The directed movement of cholesterol, cholest-5-en-3-beta-ol, or cholesterol-containing compounds, by membrane-bounded vesicles.



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vesicle-mediated cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:29353240)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29353240 GO_REF:0000024 GO_REF:0000107 NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029
JBrowse link
G Syt7 synaptotagmin 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:5645834|PMID:25860611)
UniProt
RGD
PMID:25860611 GO_REF:0000024 MGI:5645834 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in ISO
IEA
(MGI:6103674|PMID:28658628)
GO_REF:0000107
RGD
Ensembl
PMID:28658628 GO_REF:0000107 MGI:6103674 NCBI chr 1:203,360,434...203,370,295
Ensembl chr 1:203,360,440...203,370,430
JBrowse link
G Vps52 VPS52 subunit of GARP complex involved_in ISO
IEA
(MGI:6103674|PMID:28658628)
GO_REF:0000107
RGD
Ensembl
PMID:28658628 GO_REF:0000107 MGI:6103674 NCBI chr20:4,920,715...4,931,685
Ensembl chr20:4,860,843...4,931,665
JBrowse link
G Vps53 VPS53 subunit of GARP complex involved_in ISO (MGI:6103674|PMID:28658628) RGD PMID:28658628 MGI:6103674 NCBI chr10:60,919,820...61,038,674
Ensembl chr10:60,919,820...61,038,676
JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in ISO
IEA
MGI:1857091 (MGI:6103674|PMID:28658628)
GO_REF:0000107
RGD
Ensembl
PMID:28658628 GO_REF:0000107 MGI:6103674 NCBI chr14:95,378,821...95,455,871
Ensembl chr14:95,378,012...95,455,857
JBrowse link
endosome to lysosome transport of low-density lipoprotein particle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP-ribosylation factor like GTPase 8B involved_in ISS
ISO
GO_REF:0000024
(PMID:21802320)
UniProt
RGD
PMID:21802320 GO_REF:0000024 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (MGI:5691857|PMID:25144390) RGD PMID:25144390 MGI:5691857 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20091
    localization 5663
      cellular localization 3613
        intracellular transport 1626
          cytosolic transport 174
            vesicle-mediated cholesterol transport 8
              cholesterol ester hydrolysis involved in cholesterol transport 0
              endosome to lysosome transport of low-density lipoprotein particle 2
              lysosome to ER cholesterol transport 0
Path 2
Term Annotations click to browse term
  biological_process 20091
    localization 5663
      establishment of localization 4991
        transport 4826
          organic substance transport 2580
            lipid transport 472
              intracellular lipid transport 48
                intracellular sterol transport 38
                  intracellular cholesterol transport 35
                    vesicle-mediated cholesterol transport 8
                      cholesterol ester hydrolysis involved in cholesterol transport 0
                      endosome to lysosome transport of low-density lipoprotein particle 2
                      lysosome to ER cholesterol transport 0
paths to the root