ONTOLOGY REPORT - ANNOTATIONS
Term: regulation of cell-substrate junction assembly
Accession: GO:0090109
browse the term
Definition: Any process that modulates the rate, frequency, or extent of cell-substrate junction assembly. Cell-substrate junction assembly is the aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate.
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Acvrl1
activin A receptor like type 1
involved_in
ISO
(PMID:12453878)
RGD
PMID:12453878
NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
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Apod
apolipoprotein D
involved_in
ISS ISO
GO_REF:0000024 (PMID:21705670)
UniProt RGD
PMID:21705670
GO_REF:0000024
NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305
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Arhgap6
Rho GTPase activating protein 6
involved_in
ISO
(PMID:10699171)
RGD
PMID:10699171
NCBI chr X:24,953,464...25,490,003
Ensembl chr X:24,953,464...25,488,663
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Clasp2
cytoplasmic linker associated protein 2
involved_in
ISO
(PMID:24859005)
RGD
PMID:24859005
NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
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Coro1c
coronin 1C
involved_in
ISO
(PMID:19913511)
RGD
PMID:19913511
NCBI chr12:42,713,024...42,785,179
Ensembl chr12:42,712,991...42,785,179
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Dlc1
DLC1 Rho GTPase activating protein
involved_in
ISO IEA
(PMID:19158340) GO_REF:0000107
RGD Ensembl
PMID:19158340
GO_REF:0000107
NCBI chr16:55,246,716...55,671,441
Ensembl chr16:55,291,584...55,671,439
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Dmtn
dematin actin binding protein
involved_in
ISO
(MGI:3803395|PMID:18505823)
RGD
PMID:18505823
MGI:3803395
NCBI chr15:45,677,974...45,702,261
Ensembl chr15:45,677,977...45,705,601
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Dusp22
dual specificity phosphatase 22
involved_in
ISO
(PMID:20018849)
RGD
PMID:20018849
NCBI chr17:33,780,980...33,831,241
Ensembl chr17:33,780,981...33,831,321
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Fam107a
family with sequence similarity 107, member A
involved_in
ISO ISS IEA
(PMID:20543869) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:20543869
GO_REF:0000024 GO_REF:0000107
NCBI chr15:16,608,362...16,630,398
Ensembl chr15:16,607,205...16,630,396
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Itgb1bp1
integrin subunit beta 1 binding protein 1
involved_in
ISO IBA
(PMID:12473654) (MGI:5486544|PMID:18227284) GO_REF:0000033
RGD GO_Central
PMID:12473654 PMID:18227284
GO_REF:0000033 MGI:5486544
NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
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Lrp1
LDL receptor related protein 1
IMP
RGD
PMID:20197276
RGD:13800550
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
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Mmp14
matrix metallopeptidase 14
IDA
RGD
PMID:15044209
RGD:1582604
NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
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Phldb2
pleckstrin homology-like domain, family B, member 2
involved_in
ISO
(PMID:24859005)
RGD
PMID:24859005
NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
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Pten
phosphatase and tensin homolog
involved_in
ISO
(PMID:9616126)
RGD
PMID:9616126
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
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Rcc2
regulator of chromosome condensation 2
involved_in
ISO
(MGI:5551375|PMID:19738201)
RGD
PMID:19738201
MGI:5551375
NCBI chr 5:152,994,406...153,017,223
Ensembl chr 5:152,993,665...153,017,205
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Src
SRC proto-oncogene, non-receptor tyrosine kinase
involved_in
IMP
PMID:21440892
BHF-UCL
PMID:21440892
RGD:7248703
NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
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Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
involved_in
ISO
(PMID:24863063)
RGD
PMID:24863063
NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
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Cfl1
cofilin 1
IMP
RGD
PMID:24093776
RGD:11570550
NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
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Col16a1
collagen type XVI alpha 1 chain
involved_in
ISO
(PMID:24466237)
RGD
PMID:24466237
NCBI chr 5:142,388,376...142,442,825
Ensembl chr 5:142,388,426...142,442,825
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Enpp2
ectonucleotide pyrophosphatase/phosphodiesterase 2
IDA
RGD
PMID:22139091
RGD:9685417
NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
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Epb41l5
erythrocyte membrane protein band 4.1 like 5
acts_upstream_of_or_within
ISO
MGI:3822451 (PMID:18794329)
RGD
PMID:18794329
NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360
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Fermt2
FERM domain containing kindlin 2
involved_in
ISO
(PMID:29496737)
RGD
PMID:29496737
NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
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Fmn1
formin 1
acts_upstream_of_or_within
ISO
MGI:3800994 (PMID:18560567)
RGD
PMID:18560567
NCBI chr 3:100,101,103...100,485,652
Ensembl chr 3:100,134,549...100,479,220
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Hrg
histidine-rich glycoprotein
involved_in
ISO ISS
(PMID:14744774), (PMID:16436387) GO_REF:0000024
RGD UniProt
PMID:14744774 PMID:16436387
GO_REF:0000024
NCBI chr11:78,054,488...78,069,402
Ensembl chr11:78,054,498...78,069,389
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Hrg l1
histidine-rich glycoprotein like 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr11:78,039,371...78,049,353
Ensembl chr11:78,039,376...78,049,353
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Iqgap1
IQ motif containing GTPase activating protein 1
IMP
RGD
PMID:23657573
RGD:11049552
NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
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Itgb1bp1
integrin subunit beta 1 binding protein 1
involved_in
ISO
(MGI:5486551|PMID:17654484)
RGD
PMID:17654484
MGI:5486551
NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
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Kdr
kinase insert domain receptor
involved_in
IEA ISO
GO_REF:0000107 (PMID:12820653)
Ensembl RGD
PMID:12820653
GO_REF:0000107
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
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Lims1
LIM zinc finger domain containing 1
involved_in
ISO
(PMID:20926685)
RGD
PMID:20926685
NCBI chr20:26,309,833...26,418,511
Ensembl chr20:26,309,895...26,418,500
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Map4k4
mitogen-activated protein kinase kinase kinase kinase 4
involved_in
ISO
(MGI:6189265|PMID:25490267)
RGD
PMID:25490267
MGI:6189265
NCBI chr 9:42,200,708...42,326,708
Ensembl chr 9:42,200,278...42,326,698
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Myh9
myosin, heavy chain 9
IMP
RGD
PMID:21598299
RGD:12798522
NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
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Myoc
myocilin
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:18855004) GO_REF:0000024
Ensembl RGD UniProt
PMID:18855004
GO_REF:0000024 GO_REF:0000107
NCBI chr13:74,976,730...74,987,128
Ensembl chr13:74,976,730...74,987,127
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Nrp1
neuropilin 1
involved_in
ISO
(PMID:24863063)
RGD
PMID:24863063
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Poldip2
DNA polymerase delta interacting protein 2
IMP
RGD
PMID:30354218
RGD:124713558
NCBI chr10:63,407,237...63,417,605
Ensembl chr10:63,407,213...63,417,605
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Ppm1f
protein phosphatase, Mg2+/Mn2+ dependent, 1F
involved_in
ISS ISO
GO_REF:0000024 (PMID:20016286)
UniProt RGD
PMID:20016286
GO_REF:0000024
NCBI chr11:84,064,422...84,094,410
Ensembl chr11:84,064,420...84,094,340
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Ptpn11
protein tyrosine phosphatase, non-receptor type 11
IMP
RGD
PMID:16905534
RGD:39456088
NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
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Ptprj
protein tyrosine phosphatase, receptor type, J
involved_in
ISO
(PMID:21091576)
RGD
PMID:21091576
NCBI chr 3:76,405,917...76,561,842
Ensembl chr 3:76,405,927...76,562,260
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Rac1
Rac family small GTPase 1
involved_in
ISO IEA
(PMID:23129259) GO_REF:0000107
RGD Ensembl
PMID:23129259
GO_REF:0000107
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
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Rock1
Rho-associated coiled-coil containing protein kinase 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5486551|PMID:17654484) GO_REF:0000024
Ensembl RGD UniProt
PMID:17654484
GO_REF:0000024 GO_REF:0000107 MGI:5486551
NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
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S100a10
S100 calcium binding protein A10
involved_in
ISO IEA
(PMID:23129259) GO_REF:0000107
RGD Ensembl
PMID:23129259
GO_REF:0000107
NCBI chr 2:179,221,012...179,229,659
Ensembl chr 2:179,220,887...179,229,661
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Sdc4
syndecan 4
IMP
RGD
PMID:10504291
RGD:2312327
NCBI chr 3:153,154,888...153,173,576
Ensembl chr 3:153,154,896...153,173,580
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Smad3
SMAD family member 3
IDA
RGD
PMID:15987742
RGD:2300418
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
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Tek
TEK receptor tyrosine kinase
involved_in
ISO
(PMID:18425120)
RGD
PMID:18425120
NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804
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Thy1
Thy-1 cell surface antigen
involved_in
ISO IEA IBA ISS
(PMID:18346467) GO_REF:0000118 GO_REF:0000033 GO_REF:0000107 (MGI:3796911|PMID:18346467)
RGD TreeGrafter GO_Central Ensembl
PMID:18346467 PMID:18346467
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3796911 , RGD:12793016
NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
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Tsc1
TSC complex subunit 1
involved_in
ISO IEA
(PMID:10806479) GO_REF:0000107
RGD Ensembl
PMID:10806479
GO_REF:0000107
NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
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Vegfa
vascular endothelial growth factor A
involved_in
ISO IEA ISS
(PMID:16489009) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:16489009
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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Wnt4
Wnt family member 4
involved_in
ISO
UniProtKB:P01112 (MGI:5487484|PMID:23027131)
RGD
PMID:23027131
MGI:5487484
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
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Actg1
actin, gamma 1
involved_in
ISO IEA
(PMID:25705373) GO_REF:0000107
RGD Ensembl
PMID:25705373
GO_REF:0000107
NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232 Ensembl chr 3:105,619,737...105,624,232
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Actg1l1
actin, gamma 1 like 1
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 3:72,977,767...72,979,691
Ensembl chr10:105,619,737...105,624,232 Ensembl chr 3:105,619,737...105,624,232 Ensembl chr 3:105,619,737...105,624,232
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Camsap3
calmodulin regulated spectrin-associated protein family, member 3
involved_in
ISO
(PMID:27693509)
RGD
PMID:27693509
NCBI chr12:1,643,062...1,666,685
Ensembl chr12:1,643,251...1,666,685
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Clasp1
cytoplasmic linker associated protein 1
involved_in
ISO
(PMID:24859005)
RGD
PMID:24859005
NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
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Coro1c
coronin 1C
involved_in
ISO
UniProtKB:Q05397 (PMID:19913511)
RGD
PMID:19913511
NCBI chr12:42,713,024...42,785,179
Ensembl chr12:42,712,991...42,785,179
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Dapk3
death-associated protein kinase 3
involved_in
ISO IEA
(PMID:23454120) GO_REF:0000107
RGD Ensembl
PMID:23454120
GO_REF:0000107
NCBI chr 7:8,524,182...8,532,552
Ensembl chr 7:8,524,183...8,532,558
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Dusp3
dual specificity phosphatase 3
involved_in
ISO
(PMID:28759036) (MGI:6101044|PMID:28759036)
RGD
PMID:28759036
MGI:6101044
NCBI chr10:86,920,014...86,933,739
Ensembl chr10:86,920,014...86,933,962
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Efna5
ephrin A5
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:11870224) GO_REF:0000024
Ensembl RGD UniProt
PMID:11870224
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
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Epha3
Eph receptor A3
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:11870224) GO_REF:0000107
UniProt RGD Ensembl
PMID:11870224
GO_REF:0000024 GO_REF:0000107
NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
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Gpm6b
glycoprotein m6b
involved_in
ISO ISS
(PMID:21638316) GO_REF:0000024
RGD UniProt
PMID:21638316
GO_REF:0000024
NCBI chr X:28,057,788...28,204,409
Ensembl chr X:28,059,450...28,204,211
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Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(MGI:3834346|PMID:17077323)
RGD
PMID:17077323
MGI:3834346
NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
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Ldb1
LIM domain binding 1
involved_in
ISO
(MGI:5751678|PMID:19675209)
RGD
PMID:19675209
MGI:5751678
NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
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Limch1
LIM and calponin homology domains 1
involved_in
ISO IBA
(PMID:28228547) GO_REF:0000033
RGD GO_Central
PMID:28228547
GO_REF:0000033
NCBI chr14:41,112,579...41,425,001
Ensembl chr14:41,114,803...41,425,191
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Macf1
microtubule-actin crosslinking factor 1
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 (MGI:3828223|PMID:18854161) (PMID:27693509)
UniProt GO_Central TreeGrafter RGD
PMID:18854161 PMID:27693509
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:3828223
NCBI chr 5:135,623,734...135,949,097
Ensembl chr 5:135,623,742...135,945,905
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Peak1
pseudopodium-enriched atypical kinase 1
involved_in
ISO
(PMID:23105102)
RGD
PMID:23105102
NCBI chr 8:56,605,040...56,819,748
Ensembl chr 8:56,609,015...56,819,096
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Ptk2
protein tyrosine kinase 2
involved_in
ISO
UniProtKB:Q9ULV4 (PMID:19913511)
RGD
PMID:19913511
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
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Ptpra
protein tyrosine phosphatase, receptor type, A
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5442237|PMID:22801373)
UniProt Ensembl RGD
PMID:22801373
GO_REF:0000024 GO_REF:0000107 MGI:5442237
NCBI chr 3:117,650,146...117,759,744
Ensembl chr 3:117,650,183...117,759,728
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Rhod
ras homolog family member D
involved_in
ISO
(MGI:5512821|PMID:23454120)
RGD
PMID:23454120
MGI:5512821
NCBI chr 1:201,708,699...201,724,405
Ensembl chr 1:201,708,699...201,722,632
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Slk
STE20-like kinase
involved_in
ISO IEA ISS
(PMID:23128389) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:23128389
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:246,473,712...246,529,643
Ensembl chr 1:246,473,712...246,526,530
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Tsc1
TSC complex subunit 1
IMP
RGD
PMID:15611338
RGD:1601406
NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
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Vcl
vinculin
involved_in
IEA ISO
GO_REF:0000107 (PMID:26923917)
Ensembl RGD
PMID:26923917
GO_REF:0000107
NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
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Wdpcp
WD repeat containing planar cell polarity effector
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5558098 (PMID:24302887)
Ensembl RGD
PMID:24302887
GO_REF:0000107
NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all