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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of protein deubiquitination
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Accession:GO:0090085 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of protein deubiquitination. Protein deubiquitination is the removal of one or more ubiquitin groups from a protein.


show annotations for term's descendants           Sort by:
regulation of protein deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itch itchy E3 ubiquitin protein ligase involved_in ISO (MGI:3774677|PMID:18246070) RGD PMID:18246070 MGI:3774677 NCBI chr 3:143,642,348...143,733,745
Ensembl chr 3:143,645,637...143,733,543 		JBrowse link
negative regulation of protein deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:15936278) RGD PMID:15936278 NCBI chr 9:76,731,060...76,739,278
Ensembl chr 9:76,731,065...76,739,277 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (PMID:16472766) RGD PMID:16472766 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440 		JBrowse link
negative regulation of protein K48-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in ISO
ISS		 (PMID:21097510)
GO_REF:0000024		 RGD
ParkinsonsUK-UCL		 PMID:21097510 GO_REF:0000024 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO
IBA		 (PMID:21135095)
PMID:21873635		 RGD PMID:21135095 PMID:21873635 RGD:13792537 NCBI chr 1:205,765,212...205,769,236
Ensembl chr 1:205,745,120...205,816,520 		JBrowse link
positive regulation of histone deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein involved_in ISO (PMID:24526689) UniProt PMID:24526689 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038 		JBrowse link
positive regulation of Lys63-specific deubiquitinase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcp valosin-containing protein involved_in ISO (PMID:22970133) RGD PMID:22970133 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
positive regulation of protein deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tank TRAF family member-associated NFKB activator involved_in ISO (PMID:25861989) RGD PMID:25861989 NCBI chr 3:46,114,253...46,190,270
Ensembl chr 3:46,114,274...46,190,264 		JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 involved_in ISO (PMID:16684768) RGD PMID:16684768 NCBI chr10:39,037,048...39,084,328
Ensembl chr10:39,037,058...39,077,625 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in ISO (PMID:31253762) UniProt PMID:31253762 NCBI chr 8:119,622,053...119,655,264
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO		 GO_REF:0000024
(PMID:25861989)		 UniProt
RGD		 PMID:25861989 GO_REF:0000024 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351 		JBrowse link
positive regulation of protein K63-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:27824081) RGD PMID:27824081 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902 		JBrowse link
G Vcp valosin-containing protein involved_in ISO (PMID:22970133) RGD PMID:22970133 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
regulation of protein K48-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otud4 OTU deubiquitinase 4 involved_in IBA
ISO		 PMID:21873635
(PMID:25944111)		 RGD PMID:25944111 PMID:21873635 RGD:13792537 NCBI chr19:28,236,713...28,279,815
Ensembl chr19:28,236,713...28,279,815 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19748
    regulation of biological process 13044
      regulation of metabolic process 6834
        regulation of macromolecule metabolic process 6318
          regulation of protein metabolic process 2644
            regulation of proteolysis 753
              regulation of protein deubiquitination 13
                negative regulation of protein deubiquitination + 4
                positive regulation of protein deubiquitination + 7
                regulation of histone deubiquitination + 1
                regulation of protein K48-linked deubiquitination + 3
                regulation of protein K63-linked deubiquitination + 2
Path 2
Term Annotations click to browse term
  biological_process 19748
    metabolic process 12047
      organic substance metabolic process 11599
        organonitrogen compound metabolic process 6877
          protein metabolic process 5955
            protein modification process 3558
              protein modification by small protein conjugation or removal 961
                protein modification by small protein removal 167
                  protein deubiquitination 143
                    regulation of protein deubiquitination 13
                      negative regulation of protein deubiquitination + 4
                      positive regulation of protein deubiquitination + 7
                      regulation of histone deubiquitination + 1
                      regulation of protein K48-linked deubiquitination + 3
                      regulation of protein K63-linked deubiquitination + 2
paths to the root