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ONTOLOGY REPORT - ANNOTATIONS


Term:atrial cardiac muscle cell to AV node cell communication
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Accession:GO:0086066 term browser browse the term
Definition:The process that mediates interactions between an atrial cardiomyocyte and its surroundings that contributes to the process of the atrial cardiomyocyte communicating with an AV node cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.
Synonyms:exact_synonym: atrial cardiomyocyte to AV node cell communication;   atrial cardiomyocyte to atrioventricular node cell communication


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atrial cardiac muscle cell to AV node cell communication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in ISO (MGI:2449848|PMID:12571597) BHF-UCL PMID:12571597 MGI:2449848 NCBI chr 8:109,306,793...109,661,970 JBrowse link
atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in ISO (PMID:17242276), (PMID:18832177), (PMID:21859974)
(MGI:5427070|PMID:21859974)
BHF-UCL PMID:17242276 PMID:18832177 PMID:21859974 MGI:5427070 NCBI chr 8:109,306,793...109,661,970 JBrowse link
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583) BHF-UCL PMID:19343045 PMID:23264583 NCBI chr 5:65,439,336...65,442,207 JBrowse link
G KCNE5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:89,741,187...89,742,732
Ensembl chr  X:89,742,113...89,742,550
JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 2:1,675,323...1,989,110
Ensembl chr 2:1,675,360...1,989,111
JBrowse link
G NUP155 nucleoporin 155 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3839697|PMID:19070573) Ensembl
MGI
PMID:19070573 GO_REF:0000107 MGI:3839697 NCBI chr16:22,520,443...22,590,119
Ensembl chr16:22,516,990...22,589,838
JBrowse link
G SCN3B sodium voltage-gated channel beta subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:50,508,194...50,532,432
Ensembl chr 9:50,508,198...50,524,628
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in ISO (PMID:18065446) BHF-UCL PMID:18065446 NCBI chr13:23,336,143...23,424,755
Ensembl chr13:23,338,124...23,438,385
JBrowse link
atrial cardiac muscle cell to AV node cell communication by electrical coupling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GJA5 gap junction protein alpha 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:99,854,129...99,871,288
Ensembl chr 4:99,854,392...99,871,288
JBrowse link
membrane depolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:17224476) BHF-UCL PMID:17224476 NCBI chr 5:69,016,954...69,448,428 JBrowse link
G CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:44,321,954...44,887,410
Ensembl chr10:44,421,666...44,885,424
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:23,336,143...23,424,755
Ensembl chr13:23,338,124...23,438,385
JBrowse link
membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583) BHF-UCL PMID:19343045 PMID:23264583 NCBI chr 5:65,439,336...65,442,207 JBrowse link
G KCNJ5 potassium inwardly rectifying channel subfamily J member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:55,836,777...55,861,288
Ensembl chr 9:55,836,701...55,864,941
JBrowse link
G KCNN2 potassium calcium-activated channel subfamily N member 2 involved_in ISO (MGI:5292192|PMID:19139040) BHF-UCL PMID:19139040 MGI:5292192 NCBI chr 2:118,439,328...118,882,299
Ensembl chr 2:118,439,403...118,882,296
JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,675,323...1,989,110
Ensembl chr 2:1,675,360...1,989,111
JBrowse link
positive regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRPM4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23954346 RGD:10003031 NCBI chr 6:54,342,774...54,377,557
Ensembl chr 6:54,342,221...54,377,155
JBrowse link
regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in ISO (PMID:12571597)
(MGI:2449848|PMID:12571597)
BHF-UCL PMID:12571597 MGI:2449848 NCBI chr 8:109,306,793...109,661,970 JBrowse link
G GJA5 gap junction protein alpha 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:99,854,129...99,871,288
Ensembl chr 4:99,854,392...99,871,288
JBrowse link
G RYR2 ryanodine receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,652,140...54,406,691
Ensembl chr14:53,652,245...54,406,355
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16579
    cellular process 15862
      cell communication 6641
        cell communication involved in cardiac conduction 41
          atrial cardiac muscle cell to AV node cell communication 14
            atrial cardiac muscle cell to AV node cell communication by electrical coupling 1
            atrial cardiac muscle cell to AV node cell signaling + 14
            atrial cardiac muscle cell-AV node cell adhesion involved in cell communication 0
Path 2
Term Annotations click to browse term
  biological_process 16579
    biological regulation 12075
      regulation of biological process 11450
        regulation of multicellular organismal process 2793
          regulation of system process 648
            regulation of blood circulation 269
              regulation of heart contraction 199
                cardiac conduction 67
                  cell communication involved in cardiac conduction 41
                    atrial cardiac muscle cell to AV node cell communication 14
                      atrial cardiac muscle cell to AV node cell communication by electrical coupling 1
                      atrial cardiac muscle cell to AV node cell signaling + 14
                      atrial cardiac muscle cell-AV node cell adhesion involved in cell communication 0
paths to the root