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ONTOLOGY REPORT - ANNOTATIONS


Term:atrial cardiac muscle cell to AV node cell communication
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Accession:GO:0086066 term browser browse the term
Definition:The process that mediates interactions between an atrial cardiomyocyte and its surroundings that contributes to the process of the atrial cardiomyocyte communicating with an AV node cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.
Synonyms:exact_synonym: atrial cardiomyocyte to AV node cell communication;   atrial cardiomyocyte to atrioventricular node cell communication


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atrial cardiac muscle cell to AV node cell communication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2, brain involved_in IMP (MGI:2449848|PMID:12571597) BHF-UCL PMID:12571597 MGI:2449848 NCBI chr 3:126,921,607...127,500,347
Ensembl chr 3:126,921,612...127,499,350
JBrowse link
atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2, brain involved_in IMP
ISO
(MGI:5427070|PMID:21859974) BHF-UCL
MGI
PMID:21859974 GO_REF:0000096 MGI:4834177 MGI:5427070 NCBI chr 3:126,921,607...127,500,347
Ensembl chr 3:126,921,612...127,499,350
JBrowse link
G Kcna5 potassium voltage-gated channel, shaker-related subfamily, member 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:126,532,551...126,535,555
Ensembl chr 6:126,532,551...126,535,412
JBrowse link
G Kcne1l potassium voltage-gated channel, Isk-related family, member 1-like, pseudogene involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:142,304,753...142,306,198
Ensembl chr  X:142,304,752...142,306,294
JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:143,106,877...143,427,050
Ensembl chr 7:143,106,362...143,427,042
JBrowse link
G Nup155 nucleoporin 155 acts_upstream_of_or_within IMP (MGI:3839697|PMID:19070573) MGI PMID:19070573 MGI:3839697 NCBI chr15:8,109,263...8,159,859
Ensembl chr15:8,109,273...8,161,247
JBrowse link
G Scn3b sodium channel, voltage-gated, type III, beta involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:40,269,216...40,291,618
Ensembl chr 9:40,269,217...40,291,618
JBrowse link
G Scn5a sodium channel, voltage-gated, type V, alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:119,483,404...119,579,030
Ensembl chr 9:119,483,408...119,579,016
JBrowse link
atrial cardiac muscle cell to AV node cell communication by electrical coupling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja5 gap junction protein, alpha 5 involved_in ISO
IMP
(MGI:3696497|PMID:10515563) MGI
BHF-UCL
PMID:10515563 GO_REF:0000096 MGI:3696497 MGI:4834177 NCBI chr 3:97,032,402...97,053,634
Ensembl chr 3:96,904,693...97,077,416
JBrowse link
membrane depolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:118,587,240...119,197,384
Ensembl chr 6:118,587,240...119,196,890
Ensembl chr 6:118,587,240...119,196,890
JBrowse link
G Cacnb2 calcium channel, voltage-dependent, beta 2 subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:14,603,861...14,988,811
Ensembl chr 2:14,603,088...14,987,908
JBrowse link
G Scn5a sodium channel, voltage-gated, type V, alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:119,483,404...119,579,030
Ensembl chr 9:119,483,408...119,579,016
JBrowse link
membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna5 potassium voltage-gated channel, shaker-related subfamily, member 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:126,532,551...126,535,555
Ensembl chr 6:126,532,551...126,535,412
JBrowse link
G Kcnj5 potassium inwardly-rectifying channel, subfamily J, member 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:32,314,706...32,344,380
Ensembl chr 9:32,314,707...32,344,350
JBrowse link
G Kcnn2 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 involved_in IMP (MGI:5292192|PMID:19139040) BHF-UCL PMID:19139040 MGI:5292192 NCBI chr18:45,268,750...45,685,887
Ensembl chr18:45,268,860...45,686,024
JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:143,106,877...143,427,050
Ensembl chr 7:143,106,362...143,427,042
JBrowse link
positive regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 involved_in ISO RGD
MGI
PMID:23954346 GO_REF:0000096 MGI:4417868 RGD:10003031 NCBI chr 7:45,303,155...45,334,071
Ensembl chr 7:45,302,632...45,333,780
JBrowse link
regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2, brain involved_in IMP
ISO
(MGI:2449848|PMID:12571597) BHF-UCL
MGI
PMID:12571597 GO_REF:0000096 MGI:2449848 MGI:4834177 NCBI chr 3:126,921,607...127,500,347
Ensembl chr 3:126,921,612...127,499,350
JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:97,032,402...97,053,634
Ensembl chr 3:96,904,693...97,077,416
JBrowse link
G Ryr2 ryanodine receptor 2, cardiac involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:11,553,099...12,106,945
Ensembl chr13:11,553,102...12,106,945
JBrowse link
regulation of membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flna filamin, alpha involved_in IC (MGI:5578267|PMID:24951510) BHF-UCL PMID:24951510 MGI:5578267 NCBI chr  X:74,223,461...74,249,854
Ensembl chr  X:74,223,461...74,249,820
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28616
    cellular process 17619
      cell communication 7222
        cell communication involved in cardiac conduction 43
          atrial cardiac muscle cell to AV node cell communication 15
            atrial cardiac muscle cell to AV node cell communication by electrical coupling 1
            atrial cardiac muscle cell to AV node cell signaling + 15
            atrial cardiac muscle cell-AV node cell adhesion involved in cell communication 0
Path 2
Term Annotations click to browse term
  biological_process 28616
    biological regulation 13268
      regulation of biological process 12615
        regulation of multicellular organismal process 2998
          regulation of system process 671
            regulation of blood circulation 278
              regulation of heart contraction 203
                cardiac conduction 69
                  cell communication involved in cardiac conduction 43
                    atrial cardiac muscle cell to AV node cell communication 15
                      atrial cardiac muscle cell to AV node cell communication by electrical coupling 1
                      atrial cardiac muscle cell to AV node cell signaling + 15
                      atrial cardiac muscle cell-AV node cell adhesion involved in cell communication 0
paths to the root