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ONTOLOGY REPORT - ANNOTATIONS

Term:atrial cardiac muscle cell to AV node cell communication
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Accession:GO:0086066 term browser browse the term
Definition:The process that mediates interactions between an atrial cardiomyocyte and its surroundings that contributes to the process of the atrial cardiomyocyte communicating with an AV node cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.
Synonyms:exact_synonym: atrial cardiomyocyte to AV node cell communication;   atrial cardiomyocyte to atrioventricular node cell communication


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atrial cardiac muscle cell to AV node cell communication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2, brain involved_in IMP (PMID:12571597) BHF-UCL PMID:12571597 NCBI chr 3:126,715,256...127,293,996
Ensembl chr 3:126,715,261...127,292,999 		JBrowse link
atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2, brain involved_in IMP
ISO		 (PMID:21859974) BHF-UCL
GO_Central		 PMID:21859974 GO_REF:0000119 NCBI chr 3:126,715,256...127,293,996
Ensembl chr 3:126,715,261...127,292,999 		JBrowse link
G Kcna5 potassium voltage-gated channel, shaker-related subfamily, member 5 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 6:126,509,514...126,512,518
Ensembl chr 6:126,509,514...126,512,375 		JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr  X:141,087,749...141,089,194
Ensembl chr  X:141,087,748...141,089,290 		JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 7:142,660,614...142,980,787
Ensembl chr 7:142,660,099...142,980,779 		JBrowse link
G Nup155 nucleoporin 155 acts_upstream_of_or_within IMP (PMID:19070573) MGI PMID:19070573 NCBI chr15:8,135,861...8,189,343
Ensembl chr15:8,138,757...8,190,731 		JBrowse link
G Scn3b sodium channel, voltage-gated, type III, beta involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 9:40,180,512...40,202,914
Ensembl chr 9:40,180,513...40,202,914 		JBrowse link
G Scn5a sodium channel, voltage-gated, type V, alpha involved_in ISO GO_Central GO_REF:0000119 NCBI chr 9:119,312,470...119,408,096
Ensembl chr 9:119,312,474...119,408,082 		JBrowse link
atrial cardiac muscle cell to AV node cell communication by electrical coupling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja5 gap junction protein, alpha 5 involved_in ISO
IBA
IMP		 (PMID:10515563) GO_Central
BHF-UCL		 PMID:10515563 GO_REF:0000033 GO_REF:0000119 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732 		JBrowse link
membrane depolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit involved_in ISS
ISO		 BHF-UCL
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 6:118,564,201...119,174,345
Ensembl chr 6:118,564,201...119,173,851 		JBrowse link
G Cacnb2 calcium channel, voltage-dependent, beta 2 subunit involved_in ISS
ISO		 BHF-UCL
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 2:14,608,672...14,993,622
Ensembl chr 2:14,607,899...14,992,719 		JBrowse link
G Scn5a sodium channel, voltage-gated, type V, alpha involved_in ISO GO_Central GO_REF:0000119 NCBI chr 9:119,312,470...119,408,096
Ensembl chr 9:119,312,474...119,408,082 		JBrowse link
membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna5 potassium voltage-gated channel, shaker-related subfamily, member 5 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 6:126,509,514...126,512,518
Ensembl chr 6:126,509,514...126,512,375 		JBrowse link
G Kcnj5 potassium inwardly-rectifying channel, subfamily J, member 5 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 9:32,226,002...32,255,640
Ensembl chr 9:32,226,003...32,255,646 		JBrowse link
G Kcnn2 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 involved_in IMP (PMID:19139040) BHF-UCL PMID:19139040 NCBI chr18:45,401,754...45,818,954
Ensembl chr18:45,401,927...45,818,950 		JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 7:142,660,614...142,980,787
Ensembl chr 7:142,660,099...142,980,779 		JBrowse link
positive regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 involved_in ISO
ISS		 RGD
BHF-UCL
GO_Central		 PMID:23954346 GO_REF:0000024 GO_REF:0000096 RGD:10003031 NCBI chr 7:44,952,579...44,983,495
Ensembl chr 7:44,952,056...44,983,204 		JBrowse link
regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2, brain involved_in IMP
ISO		 (PMID:12571597) BHF-UCL
GO_Central		 PMID:12571597 GO_REF:0000119 NCBI chr 3:126,715,256...127,293,996
Ensembl chr 3:126,715,261...127,292,999 		JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732 		JBrowse link
G Ryr2 ryanodine receptor 2, cardiac involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr13:11,567,985...12,121,831
Ensembl chr13:11,567,988...12,121,831 		JBrowse link
regulation of membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flna filamin, alpha involved_in IC (PMID:24951510) BHF-UCL PMID:24951510 NCBI chr  X:73,267,067...73,293,787
Ensembl chr  X:73,267,067...73,293,426 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28640
    cellular process 18404
      cell communication 7588
        cell communication involved in cardiac conduction 42
          atrial cardiac muscle cell to AV node cell communication 15
            atrial cardiac muscle cell to AV node cell communication by electrical coupling 1
            atrial cardiac muscle cell to AV node cell signaling + 15
            atrial cardiac muscle cell-AV node cell adhesion involved in cell communication 0
Path 2
Term Annotations click to browse term
  biological_process 28640
    multicellular organismal process 9119
      system process 3353
        circulatory system process 636
          blood circulation 606
            regulation of blood circulation 299
              regulation of heart contraction 218
                cardiac conduction 70
                  cell communication involved in cardiac conduction 42
                    atrial cardiac muscle cell to AV node cell communication 15
                      atrial cardiac muscle cell to AV node cell communication by electrical coupling 1
                      atrial cardiac muscle cell to AV node cell signaling + 15
                      atrial cardiac muscle cell-AV node cell adhesion involved in cell communication 0
paths to the root