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ONTOLOGY REPORT - ANNOTATIONS

Term:atrial cardiac muscle cell to AV node cell communication
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Accession:GO:0086066 term browser browse the term
Definition:The process that mediates interactions between an atrial cardiomyocyte and its surroundings that contributes to the process of the atrial cardiomyocyte communicating with an AV node cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.
Synonyms:exact_synonym: atrial cardiomyocyte to AV node cell communication;   atrial cardiomyocyte to atrioventricular node cell communication

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atrial cardiac muscle cell to AV node cell communication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in ISO (PMID:12571597) BHF-UCL PMID:12571597 NCBI chr 7:60,487,776...61,174,351
Ensembl chr 7:60,938,523...61,175,519 		JBrowse link
atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:60,487,776...61,174,351
Ensembl chr 7:60,938,523...61,175,519 		JBrowse link
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,085,221...5,088,135
Ensembl chr11:5,085,518...5,087,335 		JBrowse link
G KCNE5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:97,477,667...97,485,376
Ensembl chr  X:97,478,562...97,478,987 		JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:2,261,448...2,661,840
Ensembl chr 1:2,261,845...2,661,863 		JBrowse link
G NUP155 nucleoporin 155 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:36,167,078...36,243,040 JBrowse link
G SCN3B sodium voltage-gated channel beta subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:115,031,634...115,057,829
Ensembl chr 1:115,034,508...115,057,787 		JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:767,854...869,787
Ensembl chr15:794,963...867,457 		JBrowse link
atrial cardiac muscle cell to AV node cell communication by electrical coupling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GJA5 gap junction protein alpha 5 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118
membrane depolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,107,722...2,753,970
Ensembl chr11:2,508,705...2,752,991 		JBrowse link
G CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:18,075,436...18,470,985
Ensembl chr 9:18,332,165...18,469,617 		JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:767,854...869,787
Ensembl chr15:794,963...867,457 		JBrowse link
membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,085,221...5,088,135
Ensembl chr11:5,085,518...5,087,335 		JBrowse link
G KCNJ5 potassium inwardly rectifying channel subfamily J member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:120,025,238...120,098,006
Ensembl chr 1:120,025,300...120,057,023 		JBrowse link
G KCNN2 potassium calcium-activated channel subfamily N member 2 involved_in ISO (PMID:19139040) BHF-UCL PMID:19139040 NCBI chr23:17,595,661...17,735,675
Ensembl chr23:17,598,177...17,735,669 		JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:2,261,448...2,661,840
Ensembl chr 1:2,261,845...2,661,863 		JBrowse link
positive regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRPM4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23954346 RGD:10003031 NCBI chr 6:42,379,534...42,424,721
Ensembl chr 6:42,379,659...42,424,146 		JBrowse link
regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:60,487,776...61,174,351
Ensembl chr 7:60,938,523...61,175,519 		JBrowse link
G GJA5 gap junction protein alpha 5 involved_in IEA Ensembl GO_REF:0000107
G RYR2 ryanodine receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:74,169,024...74,951,371
Ensembl chr25:74,389,122...74,953,451 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19829
    cellular process 19347
      cell communication 6235
        cell communication involved in cardiac conduction 41
          atrial cardiac muscle cell to AV node cell communication 14
            atrial cardiac muscle cell to AV node cell communication by electrical coupling 1
            atrial cardiac muscle cell to AV node cell signaling + 14
            atrial cardiac muscle cell-AV node cell adhesion involved in cell communication 0
Path 2
Term Annotations click to browse term
  biological_process 19829
    multicellular organismal process 7540
      system process 2242
        circulatory system process 599
          blood circulation 571
            regulation of blood circulation 287
              regulation of heart contraction 212
                cardiac conduction 68
                  cell communication involved in cardiac conduction 41
                    atrial cardiac muscle cell to AV node cell communication 14
                      atrial cardiac muscle cell to AV node cell communication by electrical coupling 1
                      atrial cardiac muscle cell to AV node cell signaling + 14
                      atrial cardiac muscle cell-AV node cell adhesion involved in cell communication 0
paths to the root