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ONTOLOGY REPORT - ANNOTATIONS

Term:atrial cardiac muscle cell to AV node cell communication
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Accession:GO:0086066 term browser browse the term
Definition:The process that mediates interactions between an atrial cardiomyocyte and its surroundings that contributes to the process of the atrial cardiomyocyte communicating with an AV node cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.
Synonyms:exact_synonym: atrial cardiomyocyte to AV node cell communication;   atrial cardiomyocyte to atrioventricular node cell communication


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atrial cardiac muscle cell to AV node cell communication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in ISO (PMID:12571597) BHF-UCL PMID:12571597 NCBI chr32:32,484,196...33,143,295
Ensembl chr32:32,671,281...33,141,036 		JBrowse link
atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:32,484,196...33,143,295
Ensembl chr32:32,671,281...33,141,036 		JBrowse link
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583)
(PMID:18281375)		 BHF-UCL PMID:18281375 PMID:19343045 PMID:23264583 NCBI chr27:39,808,987...39,810,789
Ensembl chr27:39,756,363...39,811,035 		JBrowse link
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in IEA Ensembl GO_REF:0000107
G KCNE5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:82,844,188...82,845,641
Ensembl chr  X:82,845,064...82,846,083 		JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:46,554,390...46,830,533
Ensembl chr18:46,518,908...46,830,043 		JBrowse link
G NUP155 nucleoporin 155 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:71,340,109...71,409,286
Ensembl chr 4:71,340,168...71,408,038 		JBrowse link
G SCN3B sodium voltage-gated channel beta subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:10,783,235...10,808,342
Ensembl chr 5:10,783,325...10,804,242 		JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:8,278,844...8,374,614
Ensembl chr23:8,280,793...8,358,560 		JBrowse link
atrial cardiac muscle cell to AV node cell communication by electrical coupling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GJA5 gap junction protein alpha 5 involved_in IBA
IEA		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr17:58,289,327...58,305,315
Ensembl chr17:58,289,327...58,305,315 		JBrowse link
membrane depolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:17224476) BHF-UCL PMID:17224476 NCBI chr27:44,007,363...44,748,251
Ensembl chr27:44,008,020...44,746,429 		JBrowse link
G CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:18,537,100...18,787,728
Ensembl chr 2:18,538,620...18,902,286 		JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:8,278,844...8,374,614
Ensembl chr23:8,280,793...8,358,560 		JBrowse link
membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583) BHF-UCL PMID:19343045 PMID:23264583 NCBI chr27:39,808,987...39,810,789
Ensembl chr27:39,756,363...39,811,035 		JBrowse link
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in IEA Ensembl GO_REF:0000107
G KCNJ5 potassium inwardly rectifying channel subfamily J member 5 involved_in ISO (PMID:20560207) BHF-UCL PMID:20560207 NCBI chr 5:5,736,544...5,760,705
Ensembl chr 5:5,740,176...5,760,866 		JBrowse link
G KCNN2 potassium calcium-activated channel subfamily N member 2 involved_in ISO (PMID:19139040) BHF-UCL PMID:19139040 NCBI chr11:4,279,362...4,423,080
Ensembl chr11:4,154,746...4,423,078 		JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:46,554,390...46,830,533
Ensembl chr18:46,518,908...46,830,043 		JBrowse link
positive regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRPM4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23954346 RGD:10003031 NCBI chr 1:107,261,760...107,304,157
Ensembl chr 1:107,261,756...107,303,346 		JBrowse link
regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:32,484,196...33,143,295
Ensembl chr32:32,671,281...33,141,036 		JBrowse link
G GJA5 gap junction protein alpha 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:58,289,327...58,305,315
Ensembl chr17:58,289,327...58,305,315 		JBrowse link
G RYR2 ryanodine receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:2,371,868...2,908,132
Ensembl chr 4:2,373,114...2,907,875 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22141
    cellular process 21672
      cell communication 6982
        cell communication involved in cardiac conduction 41
          atrial cardiac muscle cell to AV node cell communication 15
            atrial cardiac muscle cell to AV node cell communication by electrical coupling 1
            atrial cardiac muscle cell to AV node cell signaling + 15
            atrial cardiac muscle cell-AV node cell adhesion involved in cell communication 0
Path 2
Term Annotations click to browse term
  biological_process 22141
    multicellular organismal process 8214
      system process 2938
        circulatory system process 611
          blood circulation 584
            regulation of blood circulation 298
              regulation of heart contraction 219
                cardiac conduction 71
                  cell communication involved in cardiac conduction 41
                    atrial cardiac muscle cell to AV node cell communication 15
                      atrial cardiac muscle cell to AV node cell communication by electrical coupling 1
                      atrial cardiac muscle cell to AV node cell signaling + 15
                      atrial cardiac muscle cell-AV node cell adhesion involved in cell communication 0
paths to the root