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ONTOLOGY REPORT - ANNOTATIONS


Term:SA node cell to atrial cardiac muscle cell signaling
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Accession:GO:0086018 term browser browse the term
Definition:Any process that mediates the transfer of information from an SA node cardiomyocyte to an atrial cardiomyocyte.
Synonyms:exact_synonym: SA node cardiac muscle cell to atrial cardiac muscle cell signalling;   SA node cardiomyocyte to atrial cardiomyocyte signalling;   SAN cardiomyocyte to atrial cardiomyocyte signalling;   sinoatrial node cardiomyocyte to atrial cardiomyocyte signalling
 narrow_synonym: sinus node cardiomyocyte to atrial cardiomyocyte signalling


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SA node cell to atrial cardiac muscle cell signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISO (MGI:3714901|PMID:16690884) BHF-UCL PMID:16690884 MGI:3714901 NCBI chrNW_004936490:11,093,600...11,157,756 JBrowse link
membrane depolarization during SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1d calcium voltage-gated channel subunit alpha1 D involved_in
acts_upstream_of_or_within
ISO (PMID:21131953)
(MGI:3583874|PMID:12700358)
BHF-UCL
MGI
PMID:12700358 PMID:21131953 MGI:3583874 NCBI chrNW_004936473:4,164,633...4,479,866 JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISO (MGI:3714901|PMID:16690884) BHF-UCL PMID:16690884 MGI:3714901 NCBI chrNW_004936490:11,093,600...11,157,756 JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 involved_in ISO (PMID:16407510) BHF-UCL PMID:16407510 NCBI chrNW_004936471:32,527,551...32,570,548 JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO (PMID:18616619) BHF-UCL PMID:18616619 NCBI chrNW_004936473:27,883,526...27,963,994 JBrowse link
regulation of SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:12571597), (PMID:18832177)
(MGI:2449848|PMID:12571597)
BHF-UCL PMID:12571597 PMID:18832177 MGI:2449848 NCBI chrNW_004936563:3,520,195...4,170,716 JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) BHF-UCL PMID:17875969 NCBI chrNW_004936484:15,402,488...15,825,410 JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of ISO (PMID:23242162) BHF-UCL PMID:23242162 NCBI chrNW_004936510:6,366,450...6,396,056 JBrowse link
SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (MGI:5430886|PMID:18832177) BHF-UCL PMID:18832177 MGI:5430886 NCBI chrNW_004936563:3,520,195...4,170,716 JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISO (MGI:3714901|PMID:16690884) BHF-UCL PMID:16690884 MGI:3714901 NCBI chrNW_004936490:11,093,600...11,157,756 JBrowse link
G Gja5 gap junction protein alpha 5 acts_upstream_of_or_within ISO (MGI:3664488|PMID:11046183) MGI PMID:11046183 MGI:3664488 NCBI chrNW_004936867:269,477...279,549 JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 involved_in ISO (PMID:12750403) BHF-UCL PMID:12750403 NCBI chrNW_004936471:32,527,551...32,570,548 JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO (MGI:5294533|PMID:19796257) BHF-UCL PMID:19796257 MGI:5294533 NCBI chrNW_004936542:8,082,487...8,106,154 JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO (PMID:18616619) BHF-UCL PMID:18616619 NCBI chrNW_004936473:27,883,526...27,963,994 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12173
    signaling 4326
      cell-cell signaling 1374
        cell-cell signaling involved in cardiac conduction 25
          SA node cell to atrial cardiac muscle cell signaling 9
            SA node cell action potential + 9
Path 2
Term Annotations click to browse term
  biological_process 12173
    multicellular organismal process 6331
      system process 1647
        circulatory system process 502
          blood circulation 478
            heart contraction 223
              regulation of heart contraction 189
                cardiac conduction 63
                  cell communication involved in cardiac conduction 40
                    cell-cell signaling involved in cardiac conduction 25
                      SA node cell to atrial cardiac muscle cell signaling 9
                        SA node cell action potential + 9
paths to the root