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ONTOLOGY REPORT - ANNOTATIONS


Term:SA node cell to atrial cardiac muscle cell signaling
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Accession:GO:0086018 term browser browse the term
Definition:Any process that mediates the transfer of information from an SA node cardiomyocyte to an atrial cardiomyocyte.
Synonyms:exact_synonym: SA node cardiac muscle cell to atrial cardiac muscle cell signalling;   SA node cardiomyocyte to atrial cardiomyocyte signalling;   SAN cardiomyocyte to atrial cardiomyocyte signalling;   sinoatrial node cardiomyocyte to atrial cardiomyocyte signalling
 narrow_synonym: sinus node cardiomyocyte to atrial cardiomyocyte signalling



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SA node cell to atrial cardiac muscle cell signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1G calcium voltage-gated channel subunit alpha1 G involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr17:50,560,715...50,629,625
Ensembl chr17:50,560,715...50,627,474
JBrowse link
membrane depolarization during SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in TAS (PMID:19098452) BHF-UCL PMID:19098452 NCBI chr 4:112,705,622...113,383,736
Ensembl chr 4:112,818,032...113,384,221
JBrowse link
G CACNA1D calcium voltage-gated channel subunit alpha1 D involved_in
acts_upstream_of_or_within
IMP
ISO
(PMID:21131953)
(MGI:3583874|PMID:12700358)
BHF-UCL
MGI
PMID:12700358 PMID:21131953 MGI:3583874 NCBI chr 3:53,494,611...53,813,733
Ensembl chr 3:53,328,963...53,813,733
JBrowse link
G CACNA1G calcium voltage-gated channel subunit alpha1 G involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr17:50,560,715...50,629,625
Ensembl chr17:50,560,715...50,627,474
JBrowse link
G HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 involved_in IMP (PMID:16407510) BHF-UCL PMID:16407510 NCBI chr15:73,319,859...73,368,958
Ensembl chr15:73,319,859...73,368,958
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in IMP (PMID:18616619) BHF-UCL PMID:18616619 NCBI chr 3:38,548,061...38,649,687
Ensembl chr 3:38,548,057...38,649,687
JBrowse link
membrane repolarization during SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in TAS
IMP
(PMID:10820151)
(PMID:19343045)
BHF-UCL PMID:10820151 PMID:19343045 NCBI chr12:5,043,879...5,046,788
Ensembl chr12:5,043,879...5,046,788
JBrowse link
regulation of SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in IMP (PMID:12571597), (PMID:18832177) BHF-UCL PMID:12571597 PMID:18832177 NCBI chr 4:112,705,622...113,383,736
Ensembl chr 4:112,818,032...113,384,221
JBrowse link
G RYR2 ryanodine receptor 2 involved_in IMP (PMID:17875969) BHF-UCL PMID:17875969 NCBI chr 1:237,042,184...237,833,988
Ensembl chr 1:237,042,184...237,833,988
JBrowse link
G TBX18 T-box transcription factor 18 acts_upstream_of IMP (PMID:23242162) BHF-UCL PMID:23242162 NCBI chr 6:84,732,496...84,764,598
Ensembl chr 6:84,687,351...84,764,598
JBrowse link
SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 4:112,705,622...113,383,736
Ensembl chr 4:112,818,032...113,384,221
JBrowse link
G CACNA1G calcium voltage-gated channel subunit alpha1 G involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr17:50,560,715...50,629,625
Ensembl chr17:50,560,715...50,627,474
JBrowse link
G GJA5 gap junction protein alpha 5 acts_upstream_of_or_within ISO (MGI:3664488|PMID:11046183) MGI PMID:11046183 MGI:3664488 NCBI chr 1:147,756,199...147,781,127
Ensembl chr 1:147,756,199...147,773,362
JBrowse link
G HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 involved_in IMP (PMID:12750403) BHF-UCL PMID:12750403 NCBI chr15:73,319,859...73,368,958
Ensembl chr15:73,319,859...73,368,958
JBrowse link
G SCN3B sodium voltage-gated channel beta subunit 3 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr11:123,629,187...123,654,624
Ensembl chr11:123,629,187...123,655,244
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in IMP (PMID:18616619) BHF-UCL PMID:18616619 NCBI chr 3:38,548,061...38,649,687
Ensembl chr 3:38,548,057...38,649,687
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18539
    signaling 6895
      cell-cell signaling 1992
        cell-cell signaling involved in cardiac conduction 32
          SA node cell to atrial cardiac muscle cell signaling 10
            SA node cell action potential + 10
Path 2
Term Annotations click to browse term
  biological_process 18539
    multicellular organismal process 8425
      system process 2682
        circulatory system process 688
          blood circulation 605
            heart contraction 279
              regulation of heart contraction 240
                cardiac conduction 98
                  cell communication involved in cardiac conduction 60
                    cell-cell signaling involved in cardiac conduction 32
                      SA node cell to atrial cardiac muscle cell signaling 10
                        SA node cell action potential + 10
paths to the root