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ONTOLOGY REPORT - ANNOTATIONS


Term:SA node cell to atrial cardiac muscle cell signaling
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Accession:GO:0086018 term browser browse the term
Definition:Any process that mediates the transfer of information from an SA node cardiomyocyte to an atrial cardiomyocyte.
Synonyms:exact_synonym: SA node cardiac muscle cell to atrial cardiac muscle cell signalling;   SA node cardiomyocyte to atrial cardiomyocyte signalling;   SAN cardiomyocyte to atrial cardiomyocyte signalling;   sinoatrial node cardiomyocyte to atrial cardiomyocyte signalling
 narrow_synonym: sinus node cardiomyocyte to atrial cardiomyocyte signalling



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SA node cell to atrial cardiac muscle cell signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100983419 voltage-dependent T-type calcium channel subunit alpha-1G involved_in ISO (MGI:3714901|PMID:16690884) BHF-UCL PMID:16690884 MGI:3714901 NCBI chr17:44,654,558...44,786,037
Ensembl chr17:49,529,402...49,595,166
Ensembl chr17:49,529,402...49,595,166
JBrowse link
membrane depolarization during SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1D calcium voltage-gated channel subunit alpha1 D involved_in
acts_upstream_of_or_within
ISO (PMID:21131953)
(MGI:3583874|PMID:12700358)
BHF-UCL
MGI
PMID:12700358 PMID:21131953 MGI:3583874 NCBI chr 3:53,432,189...53,751,347
Ensembl chr 3:54,495,952...54,970,444
JBrowse link
G HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 involved_in ISO (PMID:16407510) BHF-UCL PMID:16407510 NCBI chr15:52,231,906...52,285,220
Ensembl chr15:70,997,020...71,042,285
JBrowse link
G LOC100983419 voltage-dependent T-type calcium channel subunit alpha-1G involved_in ISO (MGI:3714901|PMID:16690884) BHF-UCL PMID:16690884 MGI:3714901 NCBI chr17:44,654,558...44,786,037
Ensembl chr17:49,529,402...49,595,166
Ensembl chr17:49,529,402...49,595,166
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in ISO (PMID:18616619) BHF-UCL PMID:18616619 NCBI chr 3:38,444,421...38,546,364
Ensembl chr 3:38,728,897...38,812,202
JBrowse link
membrane repolarization during SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045) BHF-UCL PMID:19343045 NCBI chr12:5,165,057...5,168,307 JBrowse link
regulation of SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in ISO (PMID:12571597), (PMID:18832177)
(MGI:2449848|PMID:12571597)
BHF-UCL PMID:12571597 PMID:18832177 MGI:2449848 NCBI chr 4:105,315,776...105,882,506
Ensembl chr 4:115,967,106...116,443,905
JBrowse link
G RYR2 ryanodine receptor 2 involved_in ISO (PMID:17875969) BHF-UCL PMID:17875969 NCBI chr 1:212,600,198...213,387,312
Ensembl chr 1:217,815,676...218,383,509
JBrowse link
G TBX18 T-box transcription factor 18 acts_upstream_of ISO (PMID:23242162) BHF-UCL PMID:23242162 NCBI chr 6:82,621,987...82,654,137
Ensembl chr 6:85,862,810...85,938,799
JBrowse link
SA node cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in ISO (MGI:5430886|PMID:18832177) BHF-UCL PMID:18832177 MGI:5430886 NCBI chr 4:105,315,776...105,882,506
Ensembl chr 4:115,967,106...116,443,905
JBrowse link
G GJA5 gap junction protein alpha 5 acts_upstream_of_or_within ISO (MGI:3664488|PMID:11046183) MGI PMID:11046183 MGI:3664488 NCBI chr 1:123,200,111...123,224,626
Ensembl chr 1:112,328,337...112,329,413
JBrowse link
G HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 involved_in ISO (PMID:12750403) BHF-UCL PMID:12750403 NCBI chr15:52,231,906...52,285,220
Ensembl chr15:70,997,020...71,042,285
JBrowse link
G LOC100983419 voltage-dependent T-type calcium channel subunit alpha-1G involved_in ISO (MGI:3714901|PMID:16690884) BHF-UCL PMID:16690884 MGI:3714901 NCBI chr17:44,654,558...44,786,037
Ensembl chr17:49,529,402...49,595,166
Ensembl chr17:49,529,402...49,595,166
JBrowse link
G SCN3B sodium voltage-gated channel beta subunit 3 involved_in ISO (MGI:5294533|PMID:19796257) BHF-UCL PMID:19796257 MGI:5294533 NCBI chr11:118,460,860...118,486,563
Ensembl chr11:122,377,643...122,403,063
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in ISO (PMID:18616619) BHF-UCL PMID:18616619 NCBI chr 3:38,444,421...38,546,364
Ensembl chr 3:38,728,897...38,812,202
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12661
    signaling 4420
      cell-cell signaling 1392
        cell-cell signaling involved in cardiac conduction 26
          SA node cell to atrial cardiac muscle cell signaling 10
            SA node cell action potential + 10
Path 2
Term Annotations click to browse term
  biological_process 12661
    multicellular organismal process 6550
      system process 1689
        circulatory system process 518
          blood circulation 492
            heart contraction 228
              regulation of heart contraction 194
                cardiac conduction 64
                  cell communication involved in cardiac conduction 41
                    cell-cell signaling involved in cardiac conduction 26
                      SA node cell to atrial cardiac muscle cell signaling 10
                        SA node cell action potential + 10
paths to the root