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ONTOLOGY REPORT - ANNOTATIONS


Term:atrial cardiac muscle cell action potential
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Accession:GO:0086014 term browser browse the term
Definition:An action potential that occurs in an atrial cardiac muscle cell.



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atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in IMP (PMID:17242276), (PMID:18832177), (PMID:21859974) BHF-UCL PMID:17242276 PMID:18832177 PMID:21859974 NCBI chr 4:112,705,622...113,383,736
Ensembl chr 4:112,818,032...113,384,221
JBrowse link
G GJA1 gap junction protein alpha 1 involved_in TAS (PMID:23348765) BHF-UCL PMID:23348765 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
JBrowse link
G GJC1 gap junction protein gamma 1 involved_in TAS (PMID:23348765) BHF-UCL PMID:23348765 NCBI chr17:44,794,988...44,831,364
Ensembl chr17:44,798,448...44,830,816
JBrowse link
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in IMP (PMID:19343045), (PMID:23264583) BHF-UCL PMID:19343045 PMID:23264583 NCBI chr12:5,043,879...5,046,788
Ensembl chr12:5,043,879...5,046,788
JBrowse link
G KCNE5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in IMP (PMID:18313602) BHF-UCL PMID:18313602 NCBI chr  X:109,623,700...109,625,172
Ensembl chr  X:109,623,700...109,625,172
JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IMP (PMID:12522251) BHF-UCL PMID:12522251 NCBI chr11:2,445,008...2,849,110
Ensembl chr11:2,444,684...2,849,105
JBrowse link
G NUP155 nucleoporin 155 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3839697|PMID:19070573) Ensembl
MGI
PMID:19070573 GO_REF:0000107 MGI:3839697 NCBI chr 5:37,288,137...37,371,106
Ensembl chr 5:37,288,137...37,371,106
JBrowse link
G SCN3B sodium voltage-gated channel beta subunit 3 involved_in IMP (PMID:21051419) BHF-UCL PMID:21051419 NCBI chr11:123,629,187...123,654,624
Ensembl chr11:123,629,187...123,655,244
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in IMP (PMID:18065446) BHF-UCL PMID:18065446 NCBI chr 3:38,548,061...38,649,687
Ensembl chr 3:38,548,057...38,649,687
JBrowse link
membrane depolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in IMP (PMID:17224476) BHF-UCL PMID:17224476 NCBI chr12:1,969,552...2,697,950
Ensembl chr12:1,970,772...2,697,950
JBrowse link
G CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in IMP (PMID:17224476) BHF-UCL PMID:17224476 NCBI chr10:18,140,424...18,545,881
Ensembl chr10:18,140,424...18,543,557
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in IMP (PMID:18065446) BHF-UCL PMID:18065446 NCBI chr 3:38,548,061...38,649,687
Ensembl chr 3:38,548,057...38,649,687
JBrowse link
membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in IMP (PMID:19343045), (PMID:23264583) BHF-UCL PMID:19343045 PMID:23264583 NCBI chr12:5,043,879...5,046,788
Ensembl chr12:5,043,879...5,046,788
JBrowse link
G KCNJ3 potassium inwardly rectifying channel subfamily J member 3 involved_in IC (PMID:20560207) BHF-UCL PMID:20560207 NCBI chr 2:154,698,695...154,858,354
Ensembl chr 2:154,697,855...154,858,354
JBrowse link
G KCNJ5 potassium inwardly rectifying channel subfamily J member 5 involved_in IMP (PMID:20560207) BHF-UCL PMID:20560207 NCBI chr11:128,891,356...128,921,163
Ensembl chr11:128,891,356...128,921,163
JBrowse link
G KCNN2 potassium calcium-activated channel subfamily N member 2 involved_in IEA
ISS
(PMID:19139040) Ensembl
BHF-UCL
PMID:19139040 GO_REF:0000107 NCBI chr 5:114,055,978...114,496,500
Ensembl chr 5:114,055,926...114,496,500
JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IMP (PMID:12522251), (PMID:25786344) BHF-UCL PMID:12522251 PMID:25786344 NCBI chr11:2,445,008...2,849,110
Ensembl chr11:2,444,684...2,849,105
JBrowse link
positive regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRPM4 transient receptor potential cation channel subfamily M member 4 involved_in ISS
ISO
BHF-UCL
RGD
PMID:23954346 GO_REF:0000024 RGD:10003031 NCBI chr19:49,157,792...49,211,841
Ensembl chr19:49,157,741...49,211,836
JBrowse link
regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in IMP (PMID:12571597) BHF-UCL PMID:12571597 NCBI chr 4:112,705,622...113,383,736
Ensembl chr 4:112,818,032...113,384,221
JBrowse link
G GJA5 gap junction protein alpha 5 involved_in IMP (PMID:23348765) BHF-UCL PMID:23348765 NCBI chr 1:147,756,199...147,781,127
Ensembl chr 1:147,756,199...147,773,362
JBrowse link
G RYR2 ryanodine receptor 2 involved_in IMP (PMID:17875969) BHF-UCL PMID:17875969 NCBI chr 1:237,042,184...237,833,988
Ensembl chr 1:237,042,184...237,833,988
JBrowse link
regulation of membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLNA filamin A involved_in IC BHF-UCL GO_REF:0000111 NCBI chr  X:154,348,531...154,374,634
Ensembl chr  X:154,348,524...154,374,634
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18539
    signaling 6895
      cell-cell signaling 1992
        cell-cell signaling involved in cardiac conduction 32
          atrial cardiac muscle cell to AV node cell signaling 18
            atrial cardiac muscle cell action potential 18
              membrane depolarization during atrial cardiac muscle cell action potential 3
              membrane repolarization during atrial cardiac muscle cell action potential + 6
              negative regulation of atrial cardiac muscle cell action potential 0
              positive regulation of atrial cardiac muscle cell action potential 1
              regulation of atrial cardiac muscle cell action potential + 4
Path 2
Term Annotations click to browse term
  biological_process 18539
    biological regulation 13071
      regulation of biological process 12356
        regulation of multicellular organismal process 3021
          regulation of system process 711
            regulation of blood circulation 315
              regulation of heart contraction 240
                cardiac conduction 98
                  cell communication involved in cardiac conduction 60
                    cell-cell signaling involved in cardiac conduction 32
                      atrial cardiac muscle cell to AV node cell signaling 18
                        atrial cardiac muscle cell action potential 18
                          membrane depolarization during atrial cardiac muscle cell action potential 3
                          membrane repolarization during atrial cardiac muscle cell action potential + 6
                          negative regulation of atrial cardiac muscle cell action potential 0
                          positive regulation of atrial cardiac muscle cell action potential 1
                          regulation of atrial cardiac muscle cell action potential + 4
paths to the root