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ONTOLOGY REPORT - ANNOTATIONS

Term:protein K6-linked ubiquitination
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Accession:GO:0085020 term browser browse the term
Definition:A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 6 of the ubiquitin monomers, is added to a protein. K6-linked ubiquitination is involved in DNA repair.
Synonyms:exact_synonym: protein K6-linked polyubiquitination


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protein K6-linked ubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bard1 BRCA1 associated RING domain 1 involved_in ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:12890688), (PMID:20351172)
GO_REF:0000107
GO_REF:0000118
GO_REF:0000033		 UniProt
RGD
Ensembl
TreeGrafter
GO_Central		 PMID:12890688 PMID:20351172 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:72,616,070...72,694,553
Ensembl chr 9:72,623,155...72,694,265 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:12890688), (PMID:20351172)
GO_REF:0000104		 UniProt
RGD		 PMID:12890688 PMID:20351172 GO_REF:0000024 GO_REF:0000104 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:25621951)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:25621951 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Rnf14 ring finger protein 14 involved_in ISO (PMID:27863242), (PMID:37951215), (PMID:37951216) RGD PMID:27863242 PMID:37951215 PMID:37951216 NCBI chr18:30,131,627...30,155,686
Ensembl chr18:30,131,691...30,155,685 		JBrowse link
G Rnf144a ring finger protein 144A involved_in IEA
ISO		 GO_REF:0000107
(PMID:37955227)		 Ensembl
RGD		 PMID:37955227 GO_REF:0000107 NCBI chr 6:42,899,767...43,019,769
Ensembl chr 6:42,903,174...43,020,012 		JBrowse link
G Rnf25 ring finger protein 25 involved_in ISO (PMID:27863242) RGD PMID:27863242 NCBI chr 9:76,170,037...76,176,924
Ensembl chr 9:76,170,037...76,176,849 		JBrowse link
G Rnf4 ring finger protein 4 involved_in IDA PMID:18408734 UniProt PMID:18408734 RGD:8553731 NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566 		JBrowse link
G Rnf6 ring finger protein 6 involved_in ISO (PMID:19345326) RGD PMID:19345326 NCBI chr12:8,816,797...8,826,870
Ensembl chr12:8,816,833...8,826,847 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23115235)		 UniProt
RGD		 PMID:23115235 GO_REF:0000024 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (PMID:36426955) RGD PMID:36426955 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440 		JBrowse link
G Ube2d2b ubiquitin-conjugating enzyme E2D 2B involved_in ISO (PMID:20061386) RGD PMID:20061386 NCBI chr14:1,915,999...1,917,473
Ensembl chr14:1,916,845...1,917,416 		JBrowse link
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:36528027)		 UniProt
RGD		 PMID:36528027 GO_REF:0000024 NCBI chr 2:223,868,397...223,899,606
Ensembl chr 2:223,868,730...223,898,081 		JBrowse link
G Ube2j2 ubiquitin-conjugating enzyme E2, J2 involved_in ISO (PMID:36528027) RGD PMID:36528027 NCBI chr 5:166,533,374...166,547,811
Ensembl chr 5:166,533,418...166,547,804 		JBrowse link
G Ube2s ubiquitin-conjugating enzyme E2S involved_in ISS
ISO		 GO_REF:0000024
(PMID:20061386)		 UniProt
RGD		 PMID:20061386 GO_REF:0000024 NCBI chr 1:69,028,853...69,032,914
Ensembl chr 1:69,028,750...69,032,914 		JBrowse link
G Ube2t ubiquitin-conjugating enzyme E2T involved_in ISO (PMID:20061386) RGD PMID:20061386 NCBI chr13:46,403,352...46,413,854
Ensembl chr13:46,403,375...46,414,835 		JBrowse link
G Wdr24 WD repeat domain 24 involved_in ISO (PMID:36528027) RGD PMID:36528027 NCBI chr10:14,844,089...14,848,871
Ensembl chr10:14,843,728...14,848,864 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20292
    metabolic process 11720
      primary metabolic process 10271
        protein metabolic process 4698
          protein modification process 2017
            post-translational protein modification 875
              protein modification by small protein conjugation or removal 836
                protein modification by small protein conjugation 790
                  protein ubiquitination 722
                    protein polyubiquitination 288
                      protein K6-linked ubiquitination 16
Path 2
Term Annotations click to browse term
  biological_process 20292
    metabolic process 11720
      organic substance metabolic process 11221
        macromolecule metabolic process 9473
          protein metabolic process 4698
            protein modification process 2017
              post-translational protein modification 875
                protein modification by small protein conjugation or removal 836
                  protein modification by small protein conjugation 790
                    protein ubiquitination 722
                      protein polyubiquitination 288
                        protein K6-linked ubiquitination 16
paths to the root