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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of response to stress
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Accession:GO:0080134 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of a response to stress. Response to stress is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.

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activation of blood coagulation via clotting cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 involved_in ISO (PMID:21107324) UniProt PMID:21107324 NCBI chrNW_004624816:6,896,176...7,077,758
Ensembl chrNW_004624816:6,894,413...7,077,883 		JBrowse link
G F3 coagulation factor III, tissue factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624742:3,112,827...3,123,424
Ensembl chrNW_004624742:3,112,801...3,124,301 		JBrowse link
G Vwf von Willebrand factor acts_upstream_of_or_within ISO (PMID:30573509) MGI PMID:30573509 NCBI chrNW_004624860:2,843,268...2,973,888
Ensembl chrNW_004624860:2,858,088...2,973,052 		JBrowse link
activation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp6 caspase 6 involved_in ISO (PMID:32298652) UniProt PMID:32298652 NCBI chrNW_004624830:170,392...179,883
Ensembl chrNW_004624830:171,427...184,814 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Gbp5 guanylate binding protein 5 involved_in ISO (PMID:24739961) UniProt PMID:24739961 NCBI chrNW_004624742:8,324,902...8,335,965 JBrowse link
G Hexim1 HEXIM P-TEFb complex subunit 1 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624795:257,553...260,685 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:24971542) UniProt PMID:24971542 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO (PMID:20628368) UniProt PMID:20628368 NCBI chrNW_004624734:2,233,932...2,239,687
Ensembl chrNW_004624734:2,233,547...2,241,436 		JBrowse link
G LOC101704976 interferon-activable protein 203 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624794:2,269,282...2,296,268 JBrowse link
G LOC101714063 RNA-binding protein 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:19,605,729...19,791,856 JBrowse link
G LOC106010596 pyrin and HIN domain-containing protein 1-like involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624794:2,340,794...2,343,895 JBrowse link
G Matr3 matrin 3 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624743:32,086,821...32,147,079
Ensembl chrNW_004624743:32,115,544...32,146,921 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:20628368) UniProt PMID:20628368 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Nlrc4 NLR family CARD domain containing 4 involved_in ISO (PMID:16648852) UniProt PMID:16648852 NCBI chrNW_004624738:13,836,678...13,863,881
Ensembl chrNW_004624738:13,836,717...13,873,783 		JBrowse link
G Nlrp10 NLR family pyrin domain containing 10 involved_in ISO (PMID:22672233) UniProt PMID:22672233 NCBI chrNW_004624766:172,727...177,029 JBrowse link
G Nono non-POU domain containing octamer binding involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624903:1,562,818...1,583,648
Ensembl chrNW_004624903:1,562,743...1,586,985 		JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624893:680,929...684,251
Ensembl chrNW_004624893:681,167...684,251 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624735:7,534,483...7,702,079
Ensembl chrNW_004624735:7,534,506...7,700,305 		JBrowse link
G Pspc1 paraspeckle component 1 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624776:17,906,700...17,978,885
Ensembl chrNW_004624776:17,906,063...17,978,098 		JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:19158675) UniProt PMID:19158675 NCBI chrNW_004624782:14,247,333...14,249,861
Ensembl chrNW_004624782:14,247,864...14,249,000 		JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624764:18,223,845...18,239,748
Ensembl chrNW_004624764:18,228,365...18,240,340 		JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (PMID:22783022) BHF-UCL PMID:22783022 NCBI chrNW_004624894:300,027...388,397
Ensembl chrNW_004624894:301,082...362,683 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:25636800)
(PMID:15661922)		 UniProt
MGI		 PMID:15661922 PMID:25636800 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tomm70 translocase of outer mitochondrial membrane 70 involved_in ISO (PMID:20628368) UniProt PMID:20628368 NCBI chrNW_004624789:13,792,434...13,828,403
Ensembl chrNW_004624789:13,792,049...13,829,104 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624752:6,987,456...7,010,834
Ensembl chrNW_004624752:6,979,271...7,010,787 		JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISO (PMID:32350114), (PMID:33109609)
(PMID:32200799), (PMID:32296175)		 UniProt PMID:32200799 PMID:32296175 PMID:32350114 PMID:33109609 NCBI chrNW_004624741:24,022,433...24,033,090 JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624741:1,399,405...1,400,980
Ensembl chrNW_004624741:1,399,481...1,400,701 		JBrowse link
G Znfx1 zinc finger NFX1-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624790:6,075,202...6,103,736
Ensembl chrNW_004624790:6,078,565...6,102,715 		JBrowse link
cell surface pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISO (PMID:15294986) AgBase PMID:15294986 NCBI chrNW_004624743:33,372,023...33,374,438
Ensembl chrNW_004624743:33,367,898...33,373,922 		JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in
acts_upstream_of_or_within		 ISO (PMID:19358895)
(PMID:12719478)		 ARUK-UCL
MGI		 PMID:12719478 PMID:19358895 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
G Fcn1 ficolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:2,743,996...2,751,116
Ensembl chrNW_004624760:2,743,996...2,751,110 		JBrowse link
G Ffar2 free fatty acid receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624794:8,140,629...8,155,313
Ensembl chrNW_004624794:8,140,629...8,155,258 		JBrowse link
G Lbp lipopolysaccharide binding protein involved_in ISO (PMID:15294986) AgBase PMID:15294986 NCBI chrNW_004624842:1,306,299...1,332,269
Ensembl chrNW_004624842:1,301,831...1,332,346 		JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:22966085) ComplexPortal PMID:22966085 NCBI chrNW_004624791:10,881,319...10,886,294
Ensembl chrNW_004624791:10,881,268...10,886,297 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISO (PMID:19358895) ARUK-UCL PMID:19358895 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391 		JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:12719478) MGI PMID:12719478 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
cGAS/STING signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:39322678)
(PMID:32911482), (PMID:32912999), (PMID:33542149), (PMID:35322803), (PMID:35438208), (PMID:35460603), (PMID:39322678)		 UniProt PMID:32911482 PMID:32912999 PMID:33542149 PMID:35322803 PMID:35438208 More... NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Ddx41 DEAD-box helicase 41 involved_in ISO (PMID:35613581) UniProt PMID:35613581 NCBI chrNW_004624733:12,571,208...12,576,721
Ensembl chrNW_004624733:12,570,402...12,578,019 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (PMID:37832545)
(PMID:25636800), (PMID:30842659), (PMID:30842662), (PMID:35388221), (PMID:37832545)		 UniProt PMID:25636800 PMID:30842659 PMID:30842662 PMID:35388221 PMID:37832545 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
cytoplasmic pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpk1 alpha kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624838:6,273,398...6,288,363
Ensembl chrNW_004624838:6,229,899...6,287,920 		JBrowse link
G Becn1 beclin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:1,386,154...1,406,314
Ensembl chrNW_004624795:1,385,756...1,405,714 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:23258413) UniProt PMID:23258413 NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:23478265) UniProt PMID:23478265 NCBI chrNW_004624762:14,290,267...14,305,437
Ensembl chrNW_004624762:14,290,267...14,305,633 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Ifih1 interferon induced with helicase C domain 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624732:3,187,791...3,248,795
Ensembl chrNW_004624732:3,187,791...3,250,981 		JBrowse link
G Ipo5 importin 5 involved_in ISO (PMID:31340999) UniProt PMID:31340999 NCBI chrNW_004624793:12,971,397...13,004,126
Ensembl chrNW_004624793:12,969,459...13,004,139 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in ISO (PMID:8524823) UniProt PMID:8524823 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G Irf7 interferon regulatory factor 7 involved_in ISO (PMID:21931555) UniProt PMID:21931555 NCBI chrNW_004624766:21,850,211...21,853,189 JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:16125763), (PMID:20451243) UniProt PMID:16125763 PMID:20451243 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Rigi RNA sensor RIG-I involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:37,134,718...37,204,543
Ensembl chrNW_004624736:37,133,059...37,197,218 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (PMID:23910378), (PMID:35388221) UniProt PMID:23910378 PMID:35388221 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:29441066) UniProt PMID:29441066 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Tifa TRAF interacting protein with forkhead associated domain involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624838:6,160,712...6,167,408 JBrowse link
G Traf3ip3 TRAF3 interacting protein 3 involved_in ISO (PMID:31390091) UniProt PMID:31390091 NCBI chrNW_004624807:2,214,288...2,239,449
Ensembl chrNW_004624807:2,214,449...2,235,048 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:10,729,766...10,803,253
Ensembl chrNW_004624767:10,729,413...10,748,455 		JBrowse link
G Trim25 tripartite motif containing 25 involved_in ISO (PMID:17392790) UniProt PMID:17392790 NCBI chrNW_004624795:11,967,908...11,986,707
Ensembl chrNW_004624795:11,971,610...11,986,608 		JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon involved_in ISO (PMID:22607805) UniProt PMID:22607805 NCBI chrNW_004624786:4,080,650...4,135,200
Ensembl chrNW_004624786:4,080,427...4,135,459 		JBrowse link
endolysosomal toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Washc4 WASH complex subunit 4 acts_upstream_of_or_within ISO (PMID:33749590) MGI PMID:33749590 NCBI chrNW_004624750:3,830,646...3,883,458 JBrowse link
Factor XII activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F12 coagulation factor XII involved_in ISO (PMID:18725990) BHF-UCL PMID:18725990 NCBI chrNW_004624733:12,666,410...12,683,273
Ensembl chrNW_004624733:12,675,966...12,683,117 		JBrowse link
fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624763:22,645,807...22,818,592
Ensembl chrNW_004624763:22,646,231...22,718,294 		JBrowse link
G Angptl1 angiopoietin like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624771:3,465,761...3,486,141
Ensembl chrNW_004624771:3,466,155...3,486,436 		JBrowse link
G Anxa2 annexin A2 acts_upstream_of_or_within ISO (PMID:14702107) MGI PMID:14702107 NCBI chrNW_004624781:11,781,893...11,820,440
Ensembl chrNW_004624781:11,781,886...11,821,816 		JBrowse link
G Cpb2 carboxypeptidase B2 involved_in IEA
ISO		 TreeGrafter
InterPro
RGD		 PMID:11848438 GO_REF:0000002 GO_REF:0000118 RGD:632532 NCBI chrNW_004624748:8,850,128...8,927,986
Ensembl chrNW_004624748:8,849,900...8,928,853 		JBrowse link
G F12 coagulation factor XII involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624733:12,666,410...12,683,273
Ensembl chrNW_004624733:12,675,966...12,683,117 		JBrowse link
G F2 coagulation factor II, thrombin involved_in ISO (PMID:12855810) UniProt PMID:12855810 NCBI chrNW_004624767:1,876,974...1,887,720
Ensembl chrNW_004624767:1,877,024...1,887,958 		JBrowse link
G Fga fibrinogen alpha chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624858:5,848,817...5,856,448 JBrowse link
G Fgb fibrinogen beta chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624858:5,866,104...5,874,173
Ensembl chrNW_004624858:5,864,784...5,874,869 		JBrowse link
G Fgg fibrinogen gamma chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624858:5,828,334...5,836,382
Ensembl chrNW_004624858:5,827,316...5,838,170 		JBrowse link
G Fgl1 fibrinogen like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624769:21,308,319...21,350,026
Ensembl chrNW_004624769:21,308,280...21,350,026 		JBrowse link
G Gp1ba glycoprotein Ib platelet subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:8,789,496...8,794,897 JBrowse link
G Hrg histidine rich glycoprotein involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15869579) UniProt
MGI		 PMID:15869579 GO_REF:0000043 NCBI chrNW_004624730:70,070,302...70,086,256 JBrowse link
G Plau plasminogen activator, urokinase acts_upstream_of_or_within
involved_in		 IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624754:7,405,637...7,415,870
Ensembl chrNW_004624754:7,408,983...7,416,559 		JBrowse link
G Plg plasminogen involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624855:2,362,793...2,401,519
Ensembl chrNW_004624855:2,360,229...2,402,079 		JBrowse link
G Pros1 protein S involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624789:6,621,803...6,704,033 JBrowse link
inflammasome-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elp6 elongator acetyltransferase complex subunit 6 acts_upstream_of_or_within ISO (PMID:30097576) MGI PMID:30097576 NCBI chrNW_004624730:73,910,843...73,923,273
Ensembl chrNW_004624730:73,910,405...73,926,844 		JBrowse link
innate immune response-activating signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr4 toll like receptor 4 ISO RGD PMID:19226379 RGD:2312509 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifih1 interferon induced with helicase C domain 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624732:3,187,791...3,248,795
Ensembl chrNW_004624732:3,187,791...3,250,981 		JBrowse link
MyD88-dependent toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrfip2 LRR binding FLII interacting protein 2 acts_upstream_of_or_within ISO (PMID:19265123) MGI PMID:19265123 NCBI chrNW_004624788:15,158,920...15,294,785 JBrowse link
MyD88-dependent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd180 CD180 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624815:2,511,506...2,528,396
Ensembl chrNW_004624815:2,511,552...2,529,891 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:14660645) UniProt PMID:14660645 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:16148103) BHF-UCL PMID:16148103 NCBI chrNW_004624889:2,736,727...2,746,333 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14764662)
(PMID:12872135)
(PMID:12719478)		 MGI
InterPro		 PMID:12719478 PMID:12872135 PMID:14764662 GO_REF:0000002 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:12719478) MGI PMID:12719478 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (PMID:20037584) ComplexPortal
ARUK-UCL		 PMID:20037584 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 involved_in ISO (PMID:22011580) UniProt PMID:22011580 NCBI chrNW_004624733:40,964,020...41,006,381 JBrowse link
MyD88-independent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrfip2 LRR binding FLII interacting protein 2 acts_upstream_of_or_within ISO (PMID:19265123) MGI PMID:19265123 NCBI chrNW_004624788:15,158,920...15,294,785 JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 acts_upstream_of_or_within ISO (PMID:12872135)
(PMID:12855817)		 MGI PMID:12855817 PMID:12872135 NCBI chrNW_004624828:4,964,199...4,973,465
Ensembl chrNW_004624828:4,971,093...4,973,198 		JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO (PMID:17088249) UniProt PMID:17088249 NCBI chrNW_004624777:1,124,389...1,222,450
Ensembl chrNW_004624777:1,124,204...1,158,324 		JBrowse link
negative regulation of acute inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor ISO RGD PMID:2167912 RGD:5129103 NCBI chrNW_004624807:7,674,164...7,705,736
Ensembl chrNW_004624807:7,674,927...7,705,051 		JBrowse link
G Ash1l ASH1 like histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:24012418) MGI PMID:24012418 NCBI chrNW_004624885:961,880...1,136,990
Ensembl chrNW_004624885:961,880...1,136,731 		JBrowse link
G Il4 interleukin 4 ISO RGD PMID:17250684 RGD:2317298 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G Ins insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:14,999,088...15,000,035
Ensembl chrNW_004624767:14,999,088...15,000,035 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624937:564,191...584,470 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO RGD PMID:18479673 RGD:2301881 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481 		JBrowse link
negative regulation of acute inflammatory response to antigenic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1 adenylate cyclase activating polypeptide 1 ISO RGD PMID:17698245 RGD:2325282 NCBI chrNW_004624770:11,359,606...11,375,833
Ensembl chrNW_004624770:11,358,286...11,375,813 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (PMID:12385742) MGI PMID:12385742 NCBI chrNW_004624826:97,605...112,101 JBrowse link
G Npy neuropeptide Y ISO RGD PMID:18805447 RGD:10448932 NCBI chrNW_004624739:6,277,704...6,285,454
Ensembl chrNW_004624739:6,277,612...6,285,397 		JBrowse link
G Npy5r neuropeptide Y receptor Y5 ISO RGD PMID:18805447 RGD:10448932 NCBI chrNW_004624758:13,518,722...13,521,292
Ensembl chrNW_004624758:13,518,951...13,524,840 		JBrowse link
G Selenos selenoprotein S involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624768:3,539,369...3,550,716
Ensembl chrNW_004624768:3,539,465...3,550,211 		JBrowse link
negative regulation of acute inflammatory response to non-antigenic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1 adenylate cyclase activating polypeptide 1 ISO RGD PMID:20229361 RGD:2325270 NCBI chrNW_004624770:11,359,606...11,375,833
Ensembl chrNW_004624770:11,358,286...11,375,813 		JBrowse link
negative regulation of AIM2 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trim11 tripartite motif containing 11 involved_in ISO (PMID:27498865) UniProt PMID:27498865 NCBI chrNW_004624937:1,100,297...1,109,017
Ensembl chrNW_004624937:1,100,297...1,109,027 		JBrowse link
negative regulation of antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam3a FAM3 metabolism regulating signaling molecule A involved_in ISO (PMID:18212107) UniProt PMID:18212107 NCBI chrNW_004624946:974,903...981,798
Ensembl chrNW_004624946:972,676...982,049 		JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in ISO (PMID:33093067) UniProt PMID:33093067 NCBI chrNW_004624802:5,559,107...5,682,338
Ensembl chrNW_004624802:5,560,574...5,682,300 		JBrowse link
negative regulation of astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor involved_in ISO (PMID:20005821) ARUK-UCL PMID:20005821 NCBI chrNW_004624828:2,999,122...3,021,893
Ensembl chrNW_004624828:2,999,169...3,021,987 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:29407460) ARUK-UCL PMID:29407460 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
negative regulation of ATF6-mediated unfolded protein response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf6b activating transcription factor 6 beta involved_in ISO (PMID:9837962) UniProt PMID:9837962 NCBI chrNW_004624754:24,185,203...24,194,351
Ensembl chrNW_004624754:24,184,261...24,194,904 		JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in ISO (PMID:20160352) ParkinsonsUK-UCL PMID:20160352 RGD:10047363 NCBI chrNW_004624755:22,818,653...22,841,717
Ensembl chrNW_004624755:22,824,143...22,841,850 		JBrowse link
negative regulation of axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kiaa0319 KIAA0319 ortholog acts_upstream_of_or_within ISO (PMID:28334068) MGI PMID:28334068 NCBI chrNW_004624756:2,377,573...2,464,766
Ensembl chrNW_004624756:2,377,846...2,459,936 		JBrowse link
G Tnr tenascin R acts_upstream_of_or_within ISO (PMID:16870730) MGI PMID:16870730 NCBI chrNW_004624771:6,291,202...6,725,737
Ensembl chrNW_004624771:6,519,091...6,717,947 		JBrowse link
negative regulation of axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers2 ceramide synthase 2 involved_in ISO PMID:22393241 BHF-UCL PMID:22393241 RGD:11041067 NCBI chrNW_004624772:18,851,681...18,855,267
Ensembl chrNW_004624772:18,851,612...18,855,255 		JBrowse link
G Epha4 EPH receptor A4 involved_in
NOT		 ISO
IEA		 RGD
Ensembl		 PMID:17418490 PMID:17970742 GO_REF:0000107 RGD:5688750 RGD:5688782 NCBI chrNW_004624823:3,555,273...3,697,794
Ensembl chrNW_004624823:3,555,288...3,698,990 		JBrowse link
G Fignl2 fidgetin like 2 involved_in ISO PMID:33872220 UniProt PMID:33872220 RGD:401901234 NCBI chrNW_004624816:464,601...493,218
Ensembl chrNW_004624816:487,821...489,773 		JBrowse link
G Inpp5f inositol polyphosphate-5-phosphatase F involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:27,001,090...27,123,022
Ensembl chrNW_004624737:27,000,076...27,122,815 		JBrowse link
G Kremen1 kringle containing transmembrane protein 1 involved_in ISO (PMID:24167472) ARUK-UCL PMID:24167472 NCBI chrNW_004624747:5,377,996...5,449,203
Ensembl chrNW_004624747:5,377,996...5,445,504 		JBrowse link
G Lrig2 leucine rich repeats and immunoglobulin like domains 2 acts_upstream_of_or_within ISO (PMID:26651291) MGI PMID:26651291 NCBI chrNW_004624772:8,809,226...8,873,614
Ensembl chrNW_004624772:8,809,443...8,868,282 		JBrowse link
G Neo1 neogenin 1 acts_upstream_of_or_within ISO (PMID:26651291) MGI PMID:26651291 NCBI chrNW_004624781:1,021,460...1,227,680
Ensembl chrNW_004624781:1,019,603...1,227,666 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:26203138) ParkinsonsUK-UCL PMID:26203138 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S involved_in ISO (PMID:19780196), (PMID:22406547) UniProt PMID:19780196 PMID:22406547 NCBI chrNW_004624828:4,688,555...4,764,805
Ensembl chrNW_004624828:4,716,249...4,764,614 		JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a ISO RGD PMID:16585268 RGD:9850138 NCBI chrNW_004624768:10,739,674...10,778,036
Ensembl chrNW_004624768:10,751,991...10,778,050 		JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISO (PMID:22406547) UniProt PMID:22406547 NCBI chrNW_004624747:829,947...855,942
Ensembl chrNW_004624747:829,850...855,991 		JBrowse link
G Rtn4rl1 reticulon 4 receptor like 1 involved_in ISO (PMID:22406547) UniProt PMID:22406547 NCBI chrNW_004624786:4,634,489...4,703,672
Ensembl chrNW_004624786:4,634,268...4,703,077 		JBrowse link
G Xylt1 xylosyltransferase 1 ISO RGD PMID:18765417 RGD:2313145 NCBI chrNW_004624782:1,462,888...1,763,267
Ensembl chrNW_004624782:1,462,916...1,757,206 		JBrowse link
negative regulation of behavioral fear response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cck cholecystokinin ISO RGD PMID:12450740 RGD:1626100 NCBI chrNW_004624730:77,310,080...77,314,258
Ensembl chrNW_004624730:77,309,633...77,314,384 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:31329100 RGD:407571699 NCBI chrNW_004624774:2,496,276...2,603,894
Ensembl chrNW_004624774:2,495,304...2,602,632 		JBrowse link
negative regulation of blood coagulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen dependent TFPI regulating protein involved_in ISO (PMID:21868574) UniProt PMID:21868574 NCBI chrNW_004624756:14,289,144...14,354,999
Ensembl chrNW_004624756:14,290,028...14,354,284 		JBrowse link
G Anxa5 annexin A5 ISO RGD PMID:20684318 RGD:7241850 NCBI chrNW_004624777:1,921,354...1,969,772
Ensembl chrNW_004624777:1,919,602...1,970,059 		JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:8995232) BHF-UCL PMID:8995232 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Apoh apolipoprotein H involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624870:2,082,050...2,096,220
Ensembl chrNW_004624870:2,081,968...2,099,517 		JBrowse link
G F2 coagulation factor II, thrombin involved_in ISO (PMID:10761923) UniProt PMID:10761923 NCBI chrNW_004624767:1,876,974...1,887,720
Ensembl chrNW_004624767:1,877,024...1,887,958 		JBrowse link
G Kng1 kininogen 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624730:70,022,449...70,065,115 JBrowse link
G Proc protein C, inactivator of coagulation factors Va and VIIIa acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9616155)
(PMID:9788960)		 MGI
RGD
TreeGrafter		 PMID:1440533 PMID:9616155 PMID:9788960 GO_REF:0000118 RGD:11100042 NCBI chrNW_004624732:13,915,361...13,922,182
Ensembl chrNW_004624732:13,915,402...13,923,593 		JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO (PMID:1695900) BHF-UCL PMID:1695900 NCBI chrNW_004624740:16,128,145...16,136,696
Ensembl chrNW_004624740:16,128,059...16,137,337 		JBrowse link
G Serpine2 serpin family E member 2 involved_in ISO (PMID:17379830) BHF-UCL PMID:17379830 RGD:8553298 NCBI chrNW_004624823:1,261,458...1,326,261
Ensembl chrNW_004624823:1,261,406...1,326,917 		JBrowse link
G Tfpi tissue factor pathway inhibitor involved_in ISO (PMID:21868574) UniProt PMID:21868574 NCBI chrNW_004624899:2,401,861...2,473,762
Ensembl chrNW_004624899:2,406,282...2,473,883 		JBrowse link
G Thbd thrombomodulin involved_in ISO (PMID:10761923) UniProt PMID:10761923 NCBI chrNW_004624741:22,880,481...22,883,962 JBrowse link
G Tspan8 tetraspanin 8 ISO RGD PMID:9531564 RGD:634231 NCBI chrNW_004624750:26,634,019...26,668,779
Ensembl chrNW_004624750:26,633,793...26,669,980 		JBrowse link
G Vtn vitronectin involved_in ISO (PMID:1695900) BHF-UCL PMID:1695900 NCBI chrNW_004624786:970,288...973,344
Ensembl chrNW_004624786:966,452...973,337 		JBrowse link
negative regulation of cardiac muscle hypertrophy in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19287093) BHF-UCL PMID:19287093 NCBI chrNW_004624807:7,201,924...7,292,010
Ensembl chrNW_004624807:7,201,777...7,250,386 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 ISO RGD PMID:19204184 RGD:9685562 NCBI chrNW_004624818:3,868,089...3,882,960
Ensembl chrNW_004624818:3,868,814...3,882,960 		JBrowse link
G Foxo1 forkhead box O1 involved_in ISO PMID:26436652 UniProt PMID:26436652 RGD:13210548 NCBI chrNW_004624748:1,413,754...1,529,646
Ensembl chrNW_004624748:1,413,983...1,529,992 		JBrowse link
G Lmna lamin A/C involved_in ISO (PMID:26436652) UniProt PMID:26436652 NCBI chrNW_004624885:1,423,563...1,466,657
Ensembl chrNW_004624885:1,447,395...1,467,554 		JBrowse link
G Mlip muscular LMNA interacting protein involved_in ISO (PMID:26359501), (PMID:26436652) UniProt PMID:26359501 PMID:26436652 NCBI chrNW_004624850:1,296,435...1,606,630 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma acts_upstream_of_or_within ISO PMID:29695452 BHF-UCL PMID:29695452 RGD:150521636 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481 		JBrowse link
G Smad3 SMAD family member 3 involved_in ISO PMID:27038547 BHF-UCL PMID:27038547 RGD:11535100 NCBI chrNW_004624781:5,795,652...5,890,047
Ensembl chrNW_004624781:5,795,652...5,890,371 		JBrowse link
negative regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Daxx death domain associated protein ISO cell death RGD PMID:17289031 RGD:9587773 NCBI chrNW_004624754:23,504,465...23,509,034
Ensembl chrNW_004624754:23,505,386...23,509,241 		JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:24895913) BHF-UCL PMID:24895913 NCBI chrNW_004624742:12,027,450...12,170,003
Ensembl chrNW_004624742:12,026,248...12,170,147 		JBrowse link
G Drd1 dopamine receptor D1 ISO cell death RGD PMID:27638511 RGD:13506952 NCBI chrNW_004624733:14,517,540...14,522,173
Ensembl chrNW_004624733:14,518,146...14,520,905 		JBrowse link
G Drd2 dopamine receptor D2 ISO cell death RGD PMID:27638511 RGD:13506952 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529 		JBrowse link
G Epha4 EPH receptor A4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:3,555,273...3,697,794
Ensembl chrNW_004624823:3,555,288...3,698,990 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 ISO cell death RGD PMID:24048861 RGD:10412727 NCBI chrNW_004624787:14,355,330...14,381,353
Ensembl chrNW_004624787:14,355,791...14,381,251 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO cell death RGD PMID:18539296 RGD:9590185 NCBI chrNW_004624903:1,863,110...1,912,299
Ensembl chrNW_004624903:1,863,337...1,910,177 		JBrowse link
negative regulation of cellular response to oxidative stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspb1 heat shock protein family B (small) member 1 ISO butyrate-induced cell death RGD PMID:11522747 RGD:10402752 NCBI chrNW_004624740:14,940,161...14,941,561
Ensembl chrNW_004624740:14,939,445...14,941,819 		JBrowse link
G Meak7 MTOR associated protein, eak-7 homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26668325) UniProt
MGI		 PMID:26668325 GO_REF:0000117 NCBI chrNW_004624746:1,449,741...1,469,116
Ensembl chrNW_004624746:1,451,466...1,477,669 		JBrowse link
G Ncoa7 nuclear receptor coactivator 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:26668325) MGI
UniProt		 PMID:26668325 GO_REF:0000117 NCBI chrNW_004624753:384,621...536,023 JBrowse link
G Oxr1 oxidation resistance 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:26668325) MGI
UniProt		 PMID:26668325 GO_REF:0000117 NCBI chrNW_004624763:22,008,477...22,344,330 JBrowse link
G Rnf146 ring finger protein 146 ISO hydrogen peroxide-induced cardiomyocyte death RGD PMID:24842055 RGD:13524867 NCBI chrNW_004624753:1,671,614...1,706,793 JBrowse link
G Scly selenocysteine lyase acts_upstream_of_or_within ISO (PMID:22890841) MGI PMID:22890841 NCBI chrNW_004624847:3,260,966...3,278,915
Ensembl chrNW_004624847:3,260,952...3,279,526 		JBrowse link
G Tbc1d24 TBC1 domain family member 24 acts_upstream_of_or_within
involved_in		 IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004624824:245,717...251,603
Ensembl chrNW_004624824:243,939...254,249 		JBrowse link
G Tldc2 TBC/LysM-associated domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26668325) UniProt
MGI		 PMID:26668325 GO_REF:0000117 NCBI chrNW_004624842:2,649,943...2,668,957
Ensembl chrNW_004624842:2,626,897...2,668,822 		JBrowse link
G Tsc1 TSC complex subunit 1 ISO oxygen-glucose deprivation-induced neuron death RGD PMID:23435171 RGD:10448950 NCBI chrNW_004624760:3,479,028...3,536,612
Ensembl chrNW_004624760:3,498,692...3,532,011 		JBrowse link
negative regulation of cGAS/STING signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars2 alanyl-tRNA synthetase 2, mitochondrial involved_in ISO (PMID:39322678) UniProt PMID:39322678 NCBI chrNW_004624754:15,563,878...15,573,538
Ensembl chrNW_004624754:15,563,872...15,573,536 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:12172553), (PMID:26440888) UniProt PMID:12172553 PMID:26440888 NCBI chrNW_004624734:507,880...525,295
Ensembl chrNW_004624734:509,368...525,295 		JBrowse link
G Aurkb aurora kinase B involved_in ISO (PMID:33542149) UniProt PMID:33542149 NCBI chrNW_004624786:10,769,797...10,775,142
Ensembl chrNW_004624786:10,765,610...10,775,112 		JBrowse link
G Banf1 barrier to autointegration nuclear assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,435,143...20,436,830
Ensembl chrNW_004624767:20,434,955...20,436,640 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:32911482), (PMID:32912999) UniProt PMID:32911482 PMID:32912999 NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:32715615) UniProt PMID:32715615 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Lyplal1 lysophospholipase like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624835:3,023,151...3,052,826
Ensembl chrNW_004624835:3,022,311...3,052,724 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:35460603) UniProt PMID:35460603 NCBI chrNW_004624807:446,662...478,571
Ensembl chrNW_004624807:446,647...479,069 		JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:35322803) UniProt PMID:35322803 NCBI chrNW_004624904:1,553,253...1,579,212
Ensembl chrNW_004624904:1,555,635...1,578,982 		JBrowse link
G Ppp6c protein phosphatase 6 catalytic subunit involved_in ISO (PMID:32474700) UniProt PMID:32474700 NCBI chrNW_004624760:10,025,102...10,073,164
Ensembl chrNW_004624760:10,024,575...10,074,329 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:33273464) UniProt PMID:33273464 NCBI chrNW_004624735:7,534,483...7,702,079
Ensembl chrNW_004624735:7,534,506...7,700,305 		JBrowse link
G Smpdl3a sphingomyelin phosphodiesterase acid like 3A involved_in ISO (PMID:37890481) UniProt PMID:37890481 NCBI chrNW_004624798:8,410,048...8,422,900
Ensembl chrNW_004624798:8,409,960...8,418,575 		JBrowse link
G Spsb3 splA/ryanodine receptor domain and SOCS box containing 3 involved_in ISO (PMID:38418882) UniProt PMID:38418882 NCBI chrNW_004624913:469,732...475,767
Ensembl chrNW_004624913:470,002...475,765 		JBrowse link
G Trex1 three prime repair exonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959 		JBrowse link
G Zdhhc18 zDHHC palmitoyltransferase 18 involved_in ISO (PMID:35438208) UniProt PMID:35438208 NCBI chrNW_004624764:10,822,540...10,853,842 JBrowse link
negative regulation of chronic inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679 		JBrowse link
G Il4 interleukin 4 ISO RGD PMID:16869003 RGD:2317300 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G LOC101702005 aromatase acts_upstream_of_or_within ISO (PMID:25447050) MGI PMID:25447050 NCBI chrNW_004624731:9,053,644...9,100,212
Ensembl chrNW_004624731:9,053,803...9,100,212 		JBrowse link
negative regulation of chronic inflammatory response to antigenic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624807:4,687,249...4,691,658
Ensembl chrNW_004624807:4,687,176...4,691,732 		JBrowse link
negative regulation of chronic inflammatory response to non-antigenic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cx3cr1 C-X3-C motif chemokine receptor 1 ISO RGD PMID:24447880 RGD:9491776 NCBI chrNW_004624731:1,705,953...1,719,452
Ensembl chrNW_004624731:1,706,043...1,719,452 		JBrowse link
negative regulation of collateral sprouting of intact axon in response to injury term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spp1 secreted phosphoprotein 1 ISO RGD PMID:15625076 RGD:1581125 NCBI chrNW_004624872:4,505,796...4,513,247
Ensembl chrNW_004624872:4,505,522...4,513,742 		JBrowse link
negative regulation of complement activation, alternative pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd46 CD46 molecule involved_in ISO (PMID:9029106) AgBase PMID:9029106 NCBI chrNW_004624807:4,040,639...4,074,631 JBrowse link
G Susd4 sushi domain containing 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624835:5,531,507...5,600,181
Ensembl chrNW_004624835:5,531,472...5,599,922 		JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 involved_in ISO (PMID:17051150) UniProt PMID:17051150 NCBI chrNW_004624898:1,268,998...1,288,756
Ensembl chrNW_004624898:1,268,886...1,289,180 		JBrowse link
negative regulation of complement activation, lectin pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serping1 serpin family G member 1 involved_in ISO (PMID:10946292) UniProt PMID:10946292 NCBI chrNW_004624864:3,091,397...3,103,084
Ensembl chrNW_004624864:3,091,083...3,103,090 		JBrowse link
negative regulation of cytoplasmic pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itch itchy E3 ubiquitin protein ligase involved_in ISO (PMID:27736772) UniProt PMID:27736772 NCBI chrNW_004624842:4,840,848...4,977,785
Ensembl chrNW_004624842:4,842,419...4,935,699 		JBrowse link
G Marchf5 membrane associated ring-CH-type finger 5 involved_in ISO (PMID:31881323) UniProt PMID:31881323 NCBI chrNW_004624737:3,570,415...3,614,380
Ensembl chrNW_004624737:3,570,255...3,615,057 		JBrowse link
G Rnf39 ring finger protein 39 involved_in ISO (PMID:33674311) UniProt PMID:33674311 NCBI chrNW_004624754:25,331,126...25,348,957
Ensembl chrNW_004624754:25,331,070...25,335,153 		JBrowse link
G Sec14l1 SEC14 like lipid binding 1 involved_in ISO (PMID:23843640) UniProt PMID:23843640 NCBI chrNW_004624801:6,890,278...6,942,724
Ensembl chrNW_004624801:6,890,134...6,945,443 		JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:30927622) UniProt PMID:30927622 NCBI chrNW_004624904:1,598,422...1,603,494
Ensembl chrNW_004624904:1,597,428...1,603,504 		JBrowse link
G Tax1bp1 Tax1 binding protein 1 involved_in ISO (PMID:27736772) UniProt PMID:27736772 NCBI chrNW_004624739:2,800,453...2,894,355
Ensembl chrNW_004624739:2,801,301...2,885,094 		JBrowse link
G Tspan6 tetraspanin 6 involved_in ISO (PMID:22908223) UniProt PMID:22908223 NCBI chrNW_004624902:1,977,700...1,985,004
Ensembl chrNW_004624902:1,978,467...1,986,303 		JBrowse link
negative regulation of defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 involved_in ISO (PMID:27074721) UniProt PMID:27074721 NCBI chrNW_004624734:33,321,161...33,352,306
Ensembl chrNW_004624734:33,321,295...33,352,277 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:22842346) UniProt PMID:22842346 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Mapkbp1 mitogen-activated protein kinase binding protein 1 involved_in ISO (PMID:22700971) UniProt PMID:22700971 NCBI chrNW_004624804:8,960,218...9,010,672
Ensembl chrNW_004624804:8,960,952...9,008,753 		JBrowse link
G Pten phosphatase and tensin homolog ISO RGD PMID:18056380 RGD:2292524 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
negative regulation of defense response to virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg12 autophagy related 12 involved_in ISO (PMID:19666601)
(PMID:17709747)		 ComplexPortal PMID:17709747 PMID:19666601 NCBI chrNW_004624733:6,046,073...6,056,321
Ensembl chrNW_004624733:6,045,432...6,060,784 		JBrowse link
G Atg5 autophagy related 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624780:15,987,483...16,124,158
Ensembl chrNW_004624780:15,987,397...16,124,151 		JBrowse link
G C1qbp complement C1q binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:9,239,119...9,243,617
Ensembl chrNW_004624786:9,239,177...9,243,961 		JBrowse link
G Fgl2 fibrinogen like 2 acts_upstream_of_or_within ISO (PMID:29341118) MGI PMID:29341118 NCBI chrNW_004624739:26,501,149...26,507,305
Ensembl chrNW_004624739:26,503,965...26,507,305 		JBrowse link
G Foxp3 forkhead box P3 ISO RGD PMID:17878294 RGD:2325989 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679 		JBrowse link
G Htra1 HtrA serine peptidase 1 ISO RGD PMID:15333144 RGD:2311622 NCBI chrNW_004624737:24,217,260...24,267,836
Ensembl chrNW_004624737:24,216,525...24,267,827 		JBrowse link
G Ilrun inflammation and lipid regulator with UBA-like and NBR1-like domains involved_in ISO (PMID:29802199) UniProt PMID:29802199 NCBI chrNW_004624754:22,613,396...22,694,022 JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:34467632)
(PMID:34467632), (PMID:36221902)		 UniProt PMID:34467632 PMID:36221902 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Itch itchy E3 ubiquitin protein ligase involved_in ISO (PMID:19881509) UniProt PMID:19881509 NCBI chrNW_004624842:4,840,848...4,977,785
Ensembl chrNW_004624842:4,842,419...4,935,699 		JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:19881509) UniProt PMID:19881509 NCBI chrNW_004624904:1,553,253...1,579,212
Ensembl chrNW_004624904:1,555,635...1,578,982 		JBrowse link
G Ppm1b protein phosphatase, Mg2+/Mn2+ dependent 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624738:25,657,084...25,738,913
Ensembl chrNW_004624738:25,656,755...25,723,236 		JBrowse link
G Rnf26 ring finger protein 26 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,703,369...14,706,194 JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:22079989) CACAO
MGI		 PMID:22079989 NCBI chrNW_004624847:3,424,388...3,469,708
Ensembl chrNW_004624847:3,424,365...3,472,075 		JBrowse link
negative regulation of defense response to virus by host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:5,560,071...5,566,763
Ensembl chrNW_004624764:5,557,560...5,586,964 		JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:36159777) UniProt PMID:36159777 NCBI chrNW_004624831:2,374,341...2,468,819
Ensembl chrNW_004624831:2,371,804...2,529,726 		JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:11641396) UniProt PMID:11641396 NCBI chrNW_004624904:1,598,422...1,603,494
Ensembl chrNW_004624904:1,597,428...1,603,504 		JBrowse link
negative regulation of DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 involved_in ISO (PMID:23728299) UniProt PMID:23728299 NCBI chrNW_004624901:2,348,218...2,434,429
Ensembl chrNW_004624901:2,346,734...2,380,852 		JBrowse link
G Chek2 checkpoint kinase 2 ISO RGD PMID:20637979 RGD:10401658 NCBI chrNW_004624747:5,035,045...5,072,555
Ensembl chrNW_004624747:5,035,200...5,070,332 		JBrowse link
negative regulation of DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule (IN blood group) involved_in ISO (PMID:17045821) BHF-UCL PMID:17045821 NCBI chrNW_004624767:11,938,452...12,024,970
Ensembl chrNW_004624767:11,938,028...12,025,069 		JBrowse link
G Cd74 CD74 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624774:9,699,876...9,708,871
Ensembl chrNW_004624774:9,700,393...9,709,514 		JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISO (PMID:20736167) BHF-UCL PMID:20736167 NCBI chrNW_004624745:26,180,858...26,316,848
Ensembl chrNW_004624745:26,180,864...26,315,234 		JBrowse link
G Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 involved_in ISO (PMID:20167603) UniProt PMID:20167603 NCBI chrNW_004624807:4,800,801...4,815,779
Ensembl chrNW_004624807:4,797,401...4,809,444 		JBrowse link
G Kdm1a lysine demethylase 1A involved_in ISO (PMID:17805299) BHF-UCL PMID:17805299 NCBI chrNW_004624764:7,664,550...7,742,494 JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 involved_in ISO (PMID:29295817) UniProt PMID:29295817 NCBI chrNW_004624732:5,889,181...5,928,471 JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (PMID:17045821) BHF-UCL PMID:17045821 NCBI chrNW_004624747:10,307,826...10,308,649
Ensembl chrNW_004624747:10,303,919...10,308,821 		JBrowse link
G Pcbp4 poly(rC) binding protein 4 acts_upstream_of_or_within ISO (PMID:20817677) MGI PMID:20817677 NCBI chrNW_004624730:5,776,777...5,786,782
Ensembl chrNW_004624730:5,775,805...5,788,195 		JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 involved_in ISO (PMID:16023600) UniProt PMID:16023600 NCBI chrNW_004624803:8,407,462...8,420,316 JBrowse link
G Pttg1ip PTTG1 interacting protein acts_upstream_of_or_within ISO (PMID:24506068) MGI PMID:24506068 NCBI chrNW_004624745:30,427,967...30,441,170
Ensembl chrNW_004624745:30,429,268...30,441,095 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:11672523) BHF-UCL PMID:11672523 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946 		JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:15314165) BHF-UCL PMID:15314165 NCBI chrNW_004624790:5,509,541...5,515,240
Ensembl chrNW_004624790:5,509,311...5,515,266 		JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:15314165) BHF-UCL PMID:15314165 NCBI chrNW_004624735:6,594,564...6,598,288
Ensembl chrNW_004624735:6,594,695...6,598,757 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17690110) BHF-UCL PMID:17690110 NCBI chrNW_004624739:11,352,040...11,354,019
Ensembl chrNW_004624739:11,352,141...11,352,809 		JBrowse link
negative regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:35210392) UniProt PMID:35210392 NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Rps3 ribosomal protein S3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:1,710,768...1,715,923
Ensembl chrNW_004624817:1,710,768...1,716,224 		JBrowse link
negative regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624767:22,278,572...22,289,576
Ensembl chrNW_004624767:22,278,572...22,289,640 		JBrowse link
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:10,384,877...10,404,333
Ensembl chrNW_004624734:10,384,777...10,404,716 		JBrowse link
G Rnf169 ring finger protein 169 involved_in ISO (PMID:22742833)
(PMID:22492721), (PMID:22733822)		 UniProt PMID:22492721 PMID:22733822 PMID:22742833 NCBI chrNW_004624817:2,272,874...2,371,168
Ensembl chrNW_004624817:2,277,222...2,371,105 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17690110) BHF-UCL PMID:17690110 NCBI chrNW_004624739:11,352,040...11,354,019
Ensembl chrNW_004624739:11,352,141...11,352,809 		JBrowse link
negative regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:9461559) UniProt PMID:9461559 NCBI chrNW_004624760:4,878,811...5,032,719
Ensembl chrNW_004624760:4,878,556...5,031,491 		JBrowse link
G C1qbp complement C1q binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:9,239,119...9,243,617
Ensembl chrNW_004624786:9,239,177...9,243,961 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO (PMID:28512243) UniProt PMID:28512243 NCBI chrNW_004624741:1,566,380...1,635,365 JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25520194) TreeGrafter
MGI		 PMID:25520194 GO_REF:0000118 NCBI chrNW_004624944:358,836...383,161
Ensembl chrNW_004624944:364,563...383,098 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in ISO (PMID:24108124)
(PMID:19736316)		 UniProt PMID:19736316 PMID:24108124 NCBI chrNW_004624775:788,388...844,968
Ensembl chrNW_004624775:788,463...837,524 		JBrowse link
G Helb DNA helicase B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:1,960,336...1,993,538
Ensembl chrNW_004624802:1,960,297...1,993,961 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:32832608) UniProt PMID:32832608 NCBI chrNW_004624767:20,668,759...20,675,367
Ensembl chrNW_004624767:20,666,763...20,675,164 		JBrowse link
G Klhl15 kelch like family member 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624897:361,663...429,401
Ensembl chrNW_004624897:357,551...406,561 		JBrowse link
G Kmt5a lysine methyltransferase 5A involved_in ISO (PMID:27338793) UniProt PMID:27338793 NCBI chrNW_004624747:23,289,118...23,309,465
Ensembl chrNW_004624747:23,289,119...23,308,682 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chrNW_004624818:1,274,553...1,286,750
Ensembl chrNW_004624818:1,282,082...1,286,997 		JBrowse link
G Magef1 MAGE family member F1 involved_in ISO (PMID:29225034) UniProt PMID:29225034 NCBI chrNW_004624730:71,862,531...71,865,328 JBrowse link
G Parpbp PARP1 binding protein involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624750:6,110,357...6,163,347
Ensembl chrNW_004624750:6,111,050...6,163,335 		JBrowse link
G Plk1 polo like kinase 1 involved_in ISO (PMID:28512243) UniProt PMID:28512243 NCBI chrNW_004624782:8,811,593...8,823,060
Ensembl chrNW_004624782:8,811,616...8,826,749 		JBrowse link
G Polq DNA polymerase theta involved_in ISO (PMID:25642963), (PMID:36455556)
(PMID:25642960), (PMID:29058711)
(PMID:28687761)
(PMID:28695890)		 UniProt PMID:25642960 PMID:25642963 PMID:28687761 PMID:28695890 PMID:29058711 More... NCBI chrNW_004624731:26,649,606...26,808,098
Ensembl chrNW_004624731:26,649,727...26,807,222 		JBrowse link
G Recql5 RecQ like helicase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:5,530,411...5,568,355
Ensembl chrNW_004624801:5,530,992...5,567,628 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (PMID:23333306)
(PMID:23306437), (PMID:23333305)		 UniProt PMID:23306437 PMID:23333305 PMID:23333306 NCBI chrNW_004624866:5,619,758...5,680,165 JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624824:8,494,591...8,502,597
Ensembl chrNW_004624824:8,494,606...8,499,878 		JBrowse link
G Senp3 SUMO specific peptidase 3 involved_in ISO (PMID:32832608) UniProt PMID:32832608 NCBI chrNW_004624786:10,179,604...10,187,416
Ensembl chrNW_004624786:10,179,557...10,187,416 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:6,630,746...6,766,314
Ensembl chrNW_004624741:6,638,889...6,721,118 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chrNW_004624841:21,077...133,155
Ensembl chrNW_004624841:20,431...133,163 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:25294876) UniProt PMID:25294876 NCBI chrNW_004624770:13,000,532...13,123,346
Ensembl chrNW_004624770:13,000,316...13,124,031 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO (PMID:23333306), (PMID:23345425)
(PMID:20362325)
(PMID:23333305)		 UniProt PMID:20362325 PMID:23333305 PMID:23333306 PMID:23345425 NCBI chrNW_004624804:10,517,531...10,612,238
Ensembl chrNW_004624804:10,517,696...10,591,688 		JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO (PMID:30612738) UniProt PMID:30612738 NCBI chrNW_004624885:1,382,302...1,398,474
Ensembl chrNW_004624885:1,383,897...1,398,484 		JBrowse link
negative regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aunip aurora kinase A and ninein interacting protein involved_in ISO (PMID:29042561) UniProt PMID:29042561 NCBI chrNW_004624764:9,920,772...9,950,133
Ensembl chrNW_004624764:9,920,935...9,948,850 		JBrowse link
G Cyren cell cycle regulator of NHEJ involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624765:15,491,582...15,495,958
Ensembl chrNW_004624765:15,492,165...15,494,214 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:25820262) UniProt PMID:25820262 NCBI chrNW_004624928:458,651...532,201
Ensembl chrNW_004624928:463,279...530,115 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO (PMID:19549901) UniProt PMID:19549901 NCBI chrNW_004624802:2,337,344...2,468,757
Ensembl chrNW_004624802:2,337,464...2,467,990 		JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:26359349) UniProt PMID:26359349 NCBI chrNW_004624735:12,536,818...12,562,643
Ensembl chrNW_004624735:12,537,128...12,562,644 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624735:39,095,559...39,153,936
Ensembl chrNW_004624735:39,092,781...39,153,920 		JBrowse link
G Nudt16l1 nudix hydrolase 16 like 1 involved_in ISO (PMID:28241136) UniProt PMID:28241136 NCBI chrNW_004624824:2,476,144...2,478,650 JBrowse link
negative regulation of double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within ISO (PMID:19506022) MGI PMID:19506022 NCBI chrNW_004624731:4,383,000...4,388,486
Ensembl chrNW_004624731:4,383,434...4,388,196 		JBrowse link
negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624741:788,445...838,513
Ensembl chrNW_004624741:789,355...839,507 		JBrowse link
G Creb3 cAMP responsive element binding protein 3 involved_in ISO (PMID:16940180) ParkinsonsUK-UCL PMID:16940180 NCBI chrNW_004624868:5,056,415...5,061,234
Ensembl chrNW_004624868:5,056,691...5,060,669 		JBrowse link
G Creb3l1 cAMP responsive element binding protein 3 like 1 involved_in ISO PMID:15665855
(PMID:15665855)		 ParkinsonsUK-UCL PMID:15665855 RGD:1558627 NCBI chrNW_004624767:2,215,850...2,247,470
Ensembl chrNW_004624767:2,215,558...2,247,509 		JBrowse link
G Grina glutamate ionotropic receptor NMDA type subunit associated protein 1 acts_upstream_of_or_within ISO (PMID:22240901) MGI PMID:22240901 NCBI chrNW_004624735:12,820,678...12,823,920
Ensembl chrNW_004624735:12,821,243...12,822,787 		JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624746:29,069,995...29,081,085
Ensembl chrNW_004624746:29,068,350...29,081,085 		JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in ISO (PMID:23453807) ParkinsonsUK-UCL PMID:23453807 NCBI chrNW_004624946:997,571...1,015,748
Ensembl chrNW_004624946:996,814...1,013,379 		JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (PMID:21857923) ParkinsonsUK-UCL PMID:21857923 NCBI chrNW_004624778:106,594...279,325
Ensembl chrNW_004624778:108,761...279,230 		JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase involved_in ISO (PMID:23453807) ParkinsonsUK-UCL PMID:23453807 NCBI chrNW_004624730:63,911,066...63,994,886
Ensembl chrNW_004624730:63,911,066...63,995,596 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:14652021) ParkinsonsUK-UCL PMID:14652021 NCBI chrNW_004624818:3,900,917...3,915,457
Ensembl chrNW_004624818:3,900,917...3,911,042 		JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 acts_upstream_of_or_within ISO (PMID:20811152) MGI PMID:20811152 NCBI chrNW_004624776:10,591,855...10,596,738
Ensembl chrNW_004624776:10,591,855...10,596,676 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:11439185), (PMID:12150907), (PMID:23453807)
(PMID:21113145)
(PMID:10973942), (PMID:21113145)		 ParkinsonsUK-UCL PMID:10973942 PMID:11439185 PMID:12150907 PMID:21113145 PMID:23453807 NCBI chrNW_004624855:430,148...1,992,121
Ensembl chrNW_004624855:430,260...1,989,747 		JBrowse link
G Ptpn1 protein tyrosine phosphatase non-receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624790:5,070,537...5,135,243
Ensembl chrNW_004624790:5,073,476...5,135,181 		JBrowse link
G Selenos selenoprotein S involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624768:3,539,369...3,550,716
Ensembl chrNW_004624768:3,539,465...3,550,211 		JBrowse link
G Syvn1 synoviolin 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:15611074)
(PMID:12459480), (PMID:17059562)		 MGI
ParkinsonsUK-UCL		 PMID:12459480 PMID:15611074 PMID:17059562 NCBI chrNW_004624767:21,269,909...21,276,739
Ensembl chrNW_004624767:21,270,841...21,275,653 		JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in
acts_upstream_of_or_within		 ISO (PMID:21075086)
(PMID:22240901)		 ParkinsonsUK-UCL
MGI		 PMID:21075086 PMID:22240901 NCBI chrNW_004624816:2,519,839...2,540,766 JBrowse link
G Txndc12 thioredoxin domain containing 12 acts_upstream_of_or_within ISO (PMID:18628206) MGI PMID:18628206 NCBI chrNW_004624859:1,137,428...1,160,502
Ensembl chrNW_004624859:1,137,563...1,162,766 		JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in ISO (PMID:16571599) BHF-UCL PMID:16571599 NCBI chrNW_004624755:22,818,653...22,841,717
Ensembl chrNW_004624755:22,824,143...22,841,850 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:19135031)
PMID:20625543		 ParkinsonsUK-UCL PMID:19135031 PMID:20625543 RGD:10047191 NCBI chrNW_004624747:5,123,085...5,128,465 JBrowse link
negative regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hyou1 hypoxia up-regulated 1 involved_in ISO (PMID:17116640) ParkinsonsUK-UCL PMID:17116640 NCBI chrNW_004624784:14,427,297...14,439,027
Ensembl chrNW_004624784:14,427,130...14,439,038 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:17116640)
(PMID:23453807)		 ParkinsonsUK-UCL PMID:17116640 PMID:23453807 NCBI chrNW_004624855:430,148...1,992,121
Ensembl chrNW_004624855:430,260...1,989,747 		JBrowse link
negative regulation of endoplasmic reticulum unfolded protein response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crebrf CREB3 regulatory factor involved_in ISO (PMID:18391022) UniProt PMID:18391022 NCBI chrNW_004624733:16,952,319...17,017,396 JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:25239945) UniProt PMID:25239945 NCBI chrNW_004624747:5,123,085...5,128,465 JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624863:679,049...694,765
Ensembl chrNW_004624863:678,953...694,505 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23129660) UniProt PMID:23129660 NCBI chrNW_004624828:5,832,274...5,854,472
Ensembl chrNW_004624828:5,834,586...5,843,528 		JBrowse link
G Svip small VCP interacting protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624766:13,724,052...13,751,774
Ensembl chrNW_004624766:13,744,230...13,751,725 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:21135095) ParkinsonsUK-UCL PMID:21135095 NCBI chrNW_004624926:1,179,498...1,182,445
Ensembl chrNW_004624926:1,179,584...1,182,180 		JBrowse link
G Ubxn2a UBX domain protein 2A involved_in ISO (PMID:26265139) UniProt PMID:26265139 NCBI chrNW_004624738:6,313,925...6,341,999
Ensembl chrNW_004624738:6,323,404...6,341,996 		JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO (PMID:19135427) ParkinsonsUK-UCL PMID:19135427 NCBI chrNW_004624770:10,741,247...10,769,837 JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO (PMID:22590560) ParkinsonsUK-UCL PMID:22590560 NCBI chrNW_004624745:4,170,328...4,306,604
Ensembl chrNW_004624745:4,169,938...4,305,122 		JBrowse link
negative regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoh apolipoprotein H involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624870:2,082,050...2,096,220
Ensembl chrNW_004624870:2,081,968...2,099,517 		JBrowse link
G Cpb2 carboxypeptidase B2 ISO RGD PMID:17002650 RGD:2313647 NCBI chrNW_004624748:8,850,128...8,927,986
Ensembl chrNW_004624748:8,849,900...8,928,853 		JBrowse link
G Hrg histidine rich glycoprotein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15869579) MGI
TreeGrafter		 PMID:15869579 GO_REF:0000118 NCBI chrNW_004624730:70,070,302...70,086,256 JBrowse link
G Plg plasminogen involved_in ISO (PMID:14726399) BHF-UCL PMID:14726399 NCBI chrNW_004624855:2,362,793...2,401,519
Ensembl chrNW_004624855:2,360,229...2,402,079 		JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO (PMID:2503541) BHF-UCL PMID:2503541 NCBI chrNW_004624740:16,128,145...16,136,696
Ensembl chrNW_004624740:16,128,059...16,137,337 		JBrowse link
G Serpinf2 serpin family F member 2 involved_in ISO
IEA		 RGD
InterPro		 PMID:6506034 GO_REF:0000002 RGD:1625541 NCBI chrNW_004624786:4,441,912...4,450,487
Ensembl chrNW_004624786:4,443,249...4,449,743 		JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:6438154) BHF-UCL PMID:6438154 NCBI chrNW_004624804:6,849,660...6,866,164
Ensembl chrNW_004624804:6,849,670...6,867,684 		JBrowse link
negative regulation of GDF15-GFRAL signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp14 matrix metallopeptidase 14 involved_in ISO (PMID:35177851) UniProt PMID:35177851 NCBI chrNW_004624820:9,667,371...9,677,488
Ensembl chrNW_004624820:9,667,262...9,677,774 		JBrowse link
negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 involved_in ISO (PMID:15459207) CAFA PMID:15459207 NCBI chrNW_004624818:3,223,384...3,235,128
Ensembl chrNW_004624818:3,223,308...3,238,419 		JBrowse link
G Hyou1 hypoxia up-regulated 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624784:14,427,297...14,439,027
Ensembl chrNW_004624784:14,427,130...14,439,038 		JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:30887465 RGD:151665136 NCBI chrNW_004624887:1,065,173...1,279,660
Ensembl chrNW_004624887:1,065,883...1,279,186 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531 		JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta involved_in ISO (PMID:30496354) BHF-UCL PMID:30496354 NCBI chrNW_004624730:15,226,786...15,399,097
Ensembl chrNW_004624730:15,226,379...15,355,857 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:24553947) ParkinsonsUK-UCL PMID:24553947 NCBI chrNW_004624764:5,656,207...5,671,260
Ensembl chrNW_004624764:5,656,229...5,671,260 		JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in ISO (PMID:21075086) ParkinsonsUK-UCL PMID:21075086 NCBI chrNW_004624816:2,519,839...2,540,766 JBrowse link
negative regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd1 copper metabolism domain containing 1 acts_upstream_of_or_within ISO (PMID:17371845) MGI PMID:17371845 NCBI chrNW_004624762:11,302,730...11,407,074 JBrowse link
G Egln1 egl-9 family hypoxia inducible factor 1 involved_in ISO (PMID:16956324) HGNC-UCL PMID:16956324 NCBI chrNW_004624775:18,325,135...18,369,504 JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (PMID:25186293) MGI PMID:25186293 NCBI chrNW_004624731:5,350,912...5,359,286 JBrowse link
negative regulation of inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:19703997) MGI PMID:19703997 NCBI chrNW_004624786:3,121,282...3,319,804
Ensembl chrNW_004624786:3,174,989...3,319,804 		JBrowse link
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23609450) UniProt PMID:23609450 NCBI chrNW_004624751:23,478,263...23,488,834
Ensembl chrNW_004624751:23,478,096...23,483,521 		JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant acts_upstream_of_or_within ISO (PMID:11168643) MGI PMID:11168643 NCBI chrNW_004624828:3,305,913...3,309,983
Ensembl chrNW_004624828:3,307,635...3,310,547 		JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:15240734)
(PMID:10899903), (PMID:15240734), (PMID:15630442), (PMID:17601796)
(PMID:11591798)
(PMID:15630442)
(PMID:17601796)		 MGI PMID:10899903 PMID:11591798 PMID:15240734 PMID:15630442 PMID:17601796 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883 		JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:69,941,963...69,959,266
Ensembl chrNW_004624730:69,941,001...69,957,012 		JBrowse link
G Adora1 adenosine A1 receptor acts_upstream_of_or_within ISO (PMID:15630442) MGI PMID:15630442 NCBI chrNW_004624807:7,674,164...7,705,736
Ensembl chrNW_004624807:7,674,927...7,705,051 		JBrowse link
G Adora2a adenosine A2a receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:9,846,254...9,860,938
Ensembl chrNW_004624747:9,851,153...9,860,094 		JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (PMID:29454749) UniProt PMID:29454749 NCBI chrNW_004624739:12,939,183...12,987,574
Ensembl chrNW_004624739:12,942,165...12,987,973 		JBrowse link
G Alox5 arachidonate 5-lipoxygenase involved_in ISO (PMID:21206090) UniProt PMID:21206090 NCBI chrNW_004624966:168,244...220,430
Ensembl chrNW_004624966:168,250...220,522 		JBrowse link
G Aoah acyloxyacyl hydrolase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15155618) TreeGrafter
MGI		 PMID:15155618 GO_REF:0000118 NCBI chrNW_004624740:24,487,308...24,701,841
Ensembl chrNW_004624740:24,487,349...24,701,841 		JBrowse link
G Apoa1 apolipoprotein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:12,249,283...12,251,215
Ensembl chrNW_004624784:12,249,283...12,251,136 		JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:21784977)
(PMID:8995232)		 UniProt
BHF-UCL		 PMID:8995232 PMID:21784977 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator involved_in ISO (PMID:29454749) UniProt PMID:29454749 NCBI chrNW_004624772:18,949,221...19,016,672
Ensembl chrNW_004624772:18,949,108...19,015,504 		JBrowse link
G Ash1l ASH1 like histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:24012418) MGI PMID:24012418 NCBI chrNW_004624885:961,880...1,136,990
Ensembl chrNW_004624885:961,880...1,136,731 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:19703997) MGI PMID:19703997 NCBI chrNW_004624747:9,528,968...9,664,055
Ensembl chrNW_004624747:9,528,996...9,662,131 		JBrowse link
G C1qtnf12 C1q and TNF related 12 acts_upstream_of_or_within ISO (PMID:21849507) MGI PMID:21849507 NCBI chrNW_004624818:8,347,292...8,352,160
Ensembl chrNW_004624818:8,348,758...8,352,150 		JBrowse link
G C1qtnf3 C1q and TNF related 3 involved_in ISO (PMID:16213490) UniProt PMID:16213490 NCBI chrNW_004624759:20,456,055...20,480,670
Ensembl chrNW_004624759:20,455,905...20,481,668 		JBrowse link
G Ccn3 cellular communication network factor 3 involved_in ISO (PMID:24722330) UniProt PMID:24722330 NCBI chrNW_004624763:17,573,693...17,580,884
Ensembl chrNW_004624763:17,573,718...17,580,925 		JBrowse link
G Cd276 CD276 molecule acts_upstream_of_or_within ISO (PMID:12925852) MGI PMID:12925852 NCBI chrNW_004624781:691,348...703,202 JBrowse link
G Cd44 CD44 molecule (IN blood group) involved_in ISO (PMID:25065622) UniProt PMID:25065622 NCBI chrNW_004624767:11,938,452...12,024,970
Ensembl chrNW_004624767:11,938,028...12,025,069 		JBrowse link
G Cdh5 cadherin 5 involved_in ISO (PMID:28112401) BHF-UCL PMID:28112401 NCBI chrNW_004624746:20,028,952...20,068,029
Ensembl chrNW_004624746:20,033,008...20,057,595 		JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624768:908,907...1,024,953
Ensembl chrNW_004624768:909,099...1,024,902 		JBrowse link
G Cxcl17 C-X-C motif chemokine ligand 17 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:345,786...359,450
Ensembl chrNW_004624907:345,800...359,450 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in ISO (PMID:32424362) UniProt PMID:32424362 NCBI chrNW_004624757:5,895,912...5,953,485 JBrowse link
G Elf4 E74 like ETS transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624797:9,285,586...9,330,291
Ensembl chrNW_004624797:9,286,173...9,330,381 		JBrowse link
G Enpp3 ectonucleotide pyrophosphatase/phosphodiesterase 3 involved_in ISO (PMID:25692702) UniProt PMID:25692702 NCBI chrNW_004624753:5,817,129...5,889,089
Ensembl chrNW_004624753:5,817,235...5,890,469 		JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor involved_in ISO (PMID:22294049) CACAO PMID:22294049 NCBI chrNW_004624812:2,795,961...2,920,263
Ensembl chrNW_004624812:2,795,686...2,920,274 		JBrowse link
G Extl3 exostosin like glycosyltransferase 3 involved_in ISO (PMID:28811323) UniProt PMID:28811323 NCBI chrNW_004624758:23,257,623...23,370,782
Ensembl chrNW_004624758:23,324,512...23,368,584 		JBrowse link
G Fam76b family with sequence similarity 76 member B involved_in ISO (PMID:37643469) UniProt PMID:37643469 NCBI chrNW_004624735:40,626,450...40,646,360
Ensembl chrNW_004624735:40,626,364...40,646,474 		JBrowse link
G Fem1a fem-1 homolog A involved_in
acts_upstream_of_or_within		 ISO (PMID:16424369)
(PMID:18270204)		 UniProt
MGI		 PMID:16424369 PMID:18270204 NCBI chrNW_004624828:4,989,025...4,992,730
Ensembl chrNW_004624828:4,990,299...4,992,287 		JBrowse link
G Ffar4 free fatty acid receptor 4 involved_in ISO (PMID:20813258) UniProt PMID:20813258 NCBI chrNW_004624737:4,770,328...4,795,150
Ensembl chrNW_004624737:4,770,564...4,792,585 		JBrowse link
G Fndc4 fibronectin type III domain containing 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:9,547,801...9,550,310 JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (PMID:18421012) MGI PMID:18421012 NCBI chrNW_004624746:2,599,211...2,603,031
Ensembl chrNW_004624746:2,599,106...2,603,336 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679 		JBrowse link
G Fpr2 formyl peptide receptor 2 involved_in ISO (PMID:25505240) ARUK-UCL PMID:25505240 NCBI chrNW_004624832:3,275,365...3,282,308 JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO (PMID:30067974) UniProt PMID:30067974 NCBI chrNW_004624730:58,679,945...58,743,688
Ensembl chrNW_004624730:58,680,030...58,743,229 		JBrowse link
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624775:2,985,077...3,014,567
Ensembl chrNW_004624775:2,994,164...3,015,392 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO (PMID:19279008) BHF-UCL PMID:19279008 NCBI chrNW_004624885:2,315,371...2,321,327
Ensembl chrNW_004624885:2,315,142...2,321,327 		JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624731:5,257,813...5,262,878
Ensembl chrNW_004624731:5,257,830...5,262,473 		JBrowse link
G Ghsr growth hormone secretagogue receptor involved_in ISO (PMID:15232612) UniProt PMID:15232612 NCBI chrNW_004624730:50,484,763...50,492,443
Ensembl chrNW_004624730:50,488,887...50,492,405 		JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:26,627,560...26,632,483
Ensembl chrNW_004624740:26,627,473...26,632,027 		JBrowse link
G Gpr31 G protein-coupled receptor 31 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624785:12,155,797...12,158,107 JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in ISO (PMID:22424771) UniProt PMID:22424771 NCBI chrNW_004624786:9,938,384...9,941,210
Ensembl chrNW_004624786:9,938,384...9,941,235 		JBrowse link
G Grn granulin precursor involved_in ISO (PMID:20026663) UniProt PMID:20026663 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165 		JBrowse link
G Hamp hepcidin antimicrobial peptide acts_upstream_of_or_within ISO (PMID:20530874) MGI PMID:20530874 NCBI chrNW_004624794:8,257,760...8,259,243
Ensembl chrNW_004624794:8,257,760...8,259,264 		JBrowse link
G Hgf hepatocyte growth factor acts_upstream_of_or_within ISO (PMID:21072211) MGI PMID:21072211 NCBI chrNW_004624739:30,233,589...30,307,508
Ensembl chrNW_004624739:30,236,146...30,307,356 		JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO (PMID:19923449) MGI PMID:19923449 NCBI chrNW_004624754:24,991,650...24,992,645
Ensembl chrNW_004624754:24,991,690...24,992,643 		JBrowse link
G Il10 interleukin 10 involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chrNW_004624807:4,687,249...4,691,658
Ensembl chrNW_004624807:4,687,176...4,691,732 		JBrowse link
G Il10ra interleukin 10 receptor subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:13,386,793...13,399,871
Ensembl chrNW_004624784:13,386,965...13,403,014 		JBrowse link
G Il13 interleukin 13 involved_in ISO (PMID:30634164) ARUK-UCL PMID:30634164 NCBI chrNW_004624733:39,427,189...39,430,019
Ensembl chrNW_004624733:39,428,095...39,429,843 		JBrowse link
G Il2 interleukin 2 acts_upstream_of_or_within ISO (PMID:7589135), (PMID:8402910) MGI PMID:7589135 PMID:8402910 NCBI chrNW_004624777:2,885,537...2,890,453
Ensembl chrNW_004624777:2,885,535...2,890,453 		JBrowse link
G Il22ra1 interleukin 22 receptor subunit alpha 1 involved_in ISO (PMID:28811323) UniProt PMID:28811323 NCBI chrNW_004624764:8,601,765...8,618,161
Ensembl chrNW_004624764:8,601,587...8,618,120 		JBrowse link
G Il22ra2 interleukin 22 receptor subunit alpha 2 acts_upstream_of_or_within ISO (PMID:23075849) MGI PMID:23075849 NCBI chrNW_004624886:650,376...659,502
Ensembl chrNW_004624886:650,373...659,502 		JBrowse link
G Il2ra interleukin 2 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:12702495), (PMID:7584142) MGI PMID:7584142 PMID:12702495 NCBI chrNW_004624775:927,337...991,062
Ensembl chrNW_004624775:924,648...942,354 		JBrowse link
G Il4 interleukin 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:33510463)
(PMID:30612879)		 UniProt PMID:30612879 PMID:33510463 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:7,996,177...8,006,281
Ensembl chrNW_004624759:7,994,242...8,006,311 		JBrowse link
G Krt1 keratin 1 acts_upstream_of_or_within ISO (PMID:23132931) MGI PMID:23132931 NCBI chrNW_004624904:801,979...816,463
Ensembl chrNW_004624904:802,460...807,469 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:25065622) UniProt PMID:25065622 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G LOC101706229 peroxisome proliferator-activated receptor delta-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624753:6,737,001...6,741,152 JBrowse link
G LOC101712669 fibronectin type III domain-containing protein 4-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:7,070,242...7,073,836 JBrowse link
G LOC101718819 bile acid receptor-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624772:10,494,253...10,521,634 JBrowse link
G LOC101726439 peroxisome proliferator-activated receptor delta-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624952:751,157...757,894 JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISO (PMID:24206663) UniProt PMID:24206663 NCBI chrNW_004624860:3,611,300...3,642,682
Ensembl chrNW_004624860:3,611,300...3,642,686 		JBrowse link
G Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 involved_in ISO (PMID:27152329) UniProt PMID:27152329 NCBI chrNW_004624813:10,930,009...11,196,036
Ensembl chrNW_004624813:11,049,888...11,196,095 		JBrowse link
G Macir macrophage immunometabolism regulator involved_in ISO (PMID:30659109) UniProt PMID:30659109 NCBI chrNW_004624743:21,372,253...21,389,202
Ensembl chrNW_004624743:21,372,278...21,387,871 		JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:1,035,172...1,047,632
Ensembl chrNW_004624824:1,035,094...1,047,678 		JBrowse link
G Metrnl meteorin like, glial cell differentiation regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:11,701,821...11,715,693
Ensembl chrNW_004624801:11,701,778...11,715,383 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (PMID:29168081) UniProt PMID:29168081 NCBI chrNW_004624839:4,908,861...5,000,218
Ensembl chrNW_004624839:4,908,639...5,000,677 		JBrowse link
G Mvk mevalonate kinase involved_in ISO (PMID:16732551) BHF-UCL PMID:16732551 NCBI chrNW_004624747:10,837,743...10,858,758
Ensembl chrNW_004624747:10,834,306...10,857,595 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004624774:1,245,587...1,353,253
Ensembl chrNW_004624774:1,303,773...1,353,253 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:18270204)
(PMID:16424369)		 MGI
UniProt		 PMID:16424369 PMID:18270204 NCBI chrNW_004624830:5,334,273...5,430,887
Ensembl chrNW_004624830:5,333,616...5,408,723 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:25277106)
(PMID:24560620)		 UniProt PMID:24560620 PMID:25277106 NCBI chrNW_004624824:1,356,587...1,375,403
Ensembl chrNW_004624824:1,357,326...1,375,688 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in ISO (PMID:12483741), (PMID:16531551), (PMID:17178985) BHF-UCL PMID:12483741 PMID:16531551 PMID:17178985 NCBI chrNW_004624937:564,191...584,470 JBrowse link
G Nlrx1 NLR family member X1 acts_upstream_of_or_within ISO (PMID:21703540) MGI PMID:21703540 NCBI chrNW_004624784:14,549,926...14,564,028
Ensembl chrNW_004624784:14,549,834...14,563,398 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:1,459,601...1,473,224
Ensembl chrNW_004624767:1,459,601...1,467,795 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624750:7,222,306...7,303,809
Ensembl chrNW_004624750:7,219,251...7,303,834 		JBrowse link
G Nr5a2 nuclear receptor subfamily 5 group A member 2 involved_in ISO (PMID:17670946), (PMID:29443959), (PMID:30305617) UniProt PMID:17670946 PMID:29443959 PMID:30305617 NCBI chrNW_004624798:356,953...494,877 JBrowse link
G Nt5e 5'-nucleotidase ecto acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624799:8,766,608...8,845,296
Ensembl chrNW_004624799:8,765,711...8,845,778 		JBrowse link
G Otulin OTU deubiquitinase with linear linkage specificity involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624751:11,676,932...11,703,143
Ensembl chrNW_004624751:11,676,850...11,702,061 		JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within ISO (PMID:21715333) MGI PMID:21715333 NCBI chrNW_004624758:22,603,076...22,625,817
Ensembl chrNW_004624758:22,603,039...22,625,763 		JBrowse link
G Pdcd10 programmed cell death 10 ISO RGD PMID:32302649 RGD:401827168 NCBI chrNW_004624730:45,653,470...45,698,461
Ensembl chrNW_004624730:45,654,022...45,678,745 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624832:7,220,739...7,225,146
Ensembl chrNW_004624832:7,221,064...7,224,615 		JBrowse link
G Pla2g10 phospholipase A2 group X acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624782:3,871,034...3,887,476
Ensembl chrNW_004624782:3,870,940...3,887,426 		JBrowse link
G Pla2g5 phospholipase A2 group V acts_upstream_of_or_within ISO (PMID:24910243) MGI PMID:24910243 NCBI chrNW_004624764:5,196,215...5,207,138
Ensembl chrNW_004624764:5,196,215...5,207,232 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624752:3,646,499...3,702,553
Ensembl chrNW_004624752:3,650,922...3,701,672 		JBrowse link
G Ppard peroxisome proliferator activated receptor delta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:22,021,465...22,084,320 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481 		JBrowse link
G Ppp1r13l protein phosphatase 1 regulatory subunit 13 like involved_in ISO (PMID:28069640) UniProt PMID:28069640 NCBI chrNW_004624907:2,269,341...2,285,909
Ensembl chrNW_004624907:2,269,815...2,286,184 		JBrowse link
G Prkcd protein kinase C delta involved_in ISO (PMID:19279008) BHF-UCL PMID:19279008 NCBI chrNW_004624822:4,035,819...4,062,907
Ensembl chrNW_004624822:4,033,130...4,059,555 		JBrowse link
G Proc protein C, inactivator of coagulation factors Va and VIIIa involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624732:13,915,361...13,922,182
Ensembl chrNW_004624732:13,915,402...13,923,593 		JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:18270204) TreeGrafter
MGI
UniProt		 PMID:18270204 GO_REF:0000024 GO_REF:0000118 NCBI chrNW_004624759:14,243,887...14,259,090
Ensembl chrNW_004624759:14,244,899...14,258,445 		JBrowse link
G Ptgis prostaglandin I2 synthase involved_in ISS UniProt GO_REF:0000024 NCBI chrNW_004624790:5,850,647...5,885,754
Ensembl chrNW_004624790:5,850,810...5,886,014 		JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (PMID:14726372) UniProt PMID:14726372 NCBI chrNW_004624770:19,808,400...19,877,494
Ensembl chrNW_004624770:19,808,400...19,876,503 		JBrowse link
G Rabgef1 RAB guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (PMID:15235600) MGI PMID:15235600 NCBI chrNW_004624740:8,624,231...8,688,747
Ensembl chrNW_004624740:8,624,205...8,690,800 		JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO (PMID:29304157) BHF-UCL PMID:29304157 NCBI chrNW_004624748:6,358,588...6,533,217
Ensembl chrNW_004624748:6,358,180...6,533,249 		JBrowse link
G Rora RAR related orphan receptor A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678 		JBrowse link
G Sharpin SHANK associated RH domain interactor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624735:12,719,196...12,723,578
Ensembl chrNW_004624735:12,719,762...12,723,348 		JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO (PMID:24026300) ARUK-UCL PMID:24026300 NCBI chrNW_004624741:3,157,734...3,202,018 JBrowse link
G Slc39a8 solute carrier family 39 member 8 acts_upstream_of_negative_effect ISO (PMID:23403290) UniProt PMID:23403290 NCBI chrNW_004624830:5,514,595...5,573,250
Ensembl chrNW_004624830:5,514,780...5,574,894 		JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (PMID:10559937) UniProt PMID:10559937 NCBI chrNW_004624781:5,795,652...5,890,047
Ensembl chrNW_004624781:5,795,652...5,890,371 		JBrowse link
G Smpdl3b sphingomyelin phosphodiesterase acid like 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:11,785,739...11,807,351
Ensembl chrNW_004624764:11,785,640...11,807,084 		JBrowse link
G Socs3 suppressor of cytokine signaling 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:7,841,230...7,843,912
Ensembl chrNW_004624801:7,840,889...7,843,860 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624738:28,150,004...28,217,850
Ensembl chrNW_004624738:28,150,664...28,216,389 		JBrowse link
G Sod1 superoxide dismutase 1 involved_in ISO (PMID:25381879) ARUK-UCL PMID:25381879 NCBI chrNW_004624745:20,032,003...20,037,958
Ensembl chrNW_004624745:20,032,011...20,037,958 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:28811323) UniProt PMID:28811323 NCBI chrNW_004624795:1,648,235...1,680,788
Ensembl chrNW_004624795:1,648,080...1,681,200 		JBrowse link
G Tmsb4x thymosin beta 4 X-linked involved_in ISO (PMID:21343177) CAFA PMID:21343177 NCBI chrNW_004624882:1,198,099...1,200,237
Ensembl chrNW_004624882:1,198,099...1,200,201 		JBrowse link
G Tnfaip6 TNF alpha induced protein 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624866:5,706,483...5,758,666
Ensembl chrNW_004624866:5,706,850...5,728,771 		JBrowse link
G Tnfaip8l2 TNF alpha induced protein 8 like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21466895) TreeGrafter
MGI		 PMID:21466895 GO_REF:0000118 NCBI chrNW_004624772:18,695,670...18,698,304
Ensembl chrNW_004624772:18,695,083...18,697,688 		JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A involved_in ISO (PMID:13130484) BHF-UCL PMID:13130484 NCBI chrNW_004624860:3,111,244...3,123,041
Ensembl chrNW_004624860:3,111,630...3,122,711 		JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B acts_upstream_of_or_within ISO (PMID:11588035) MGI PMID:11588035 NCBI chrNW_004624818:894,470...922,806
Ensembl chrNW_004624818:896,150...922,710 		JBrowse link
G Trim45 tripartite motif containing 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:12,802,710...12,815,432
Ensembl chrNW_004624772:12,806,174...12,815,456 		JBrowse link
G Trim65 tripartite motif containing 65 involved_in ISO (PMID:31310649) UniProt PMID:31310649 NCBI chrNW_004624801:5,779,009...5,783,542 JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in ISO (PMID:18083102) UniProt PMID:18083102 NCBI chrNW_004624804:8,711,487...8,729,025
Ensembl chrNW_004624804:8,710,821...8,728,072 		JBrowse link
G Uaca uveal autoantigen with coiled-coil domains and ankyrin repeats acts_upstream_of_or_within ISO (PMID:14961764) MGI PMID:14961764 NCBI chrNW_004624781:3,106,658...3,189,325
Ensembl chrNW_004624781:3,106,608...3,191,870 		JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:25533483) ParkinsonsUK-UCL PMID:25533483 NCBI chrNW_004624914:160,483...188,534
Ensembl chrNW_004624914:160,483...188,490 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within		 ISO (PMID:21784977)
(PMID:11588035), (PMID:8630730)		 UniProt
MGI		 PMID:8630730 PMID:11588035 PMID:21784977 NCBI chrNW_004624794:12,732,222...12,738,006
Ensembl chrNW_004624794:12,734,191...12,737,971 		JBrowse link
negative regulation of inflammatory response to antigenic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (PMID:16492738) MGI PMID:16492738 NCBI chrNW_004624826:97,605...112,101 JBrowse link
G Gpr17 G protein-coupled receptor 17 acts_upstream_of_or_within ISO (PMID:20574000) MGI PMID:20574000 NCBI chrNW_004624732:14,115,267...14,129,714
Ensembl chrNW_004624732:14,115,325...14,128,169 		JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within ISO (PMID:12751789) MGI PMID:12751789 NCBI chrNW_004624730:3,313,773...3,314,870
Ensembl chrNW_004624730:3,313,972...3,314,626 		JBrowse link
G Gpx2 glutathione peroxidase 2 acts_upstream_of_or_within ISO (PMID:12751789) MGI PMID:12751789 NCBI chrNW_004624734:36,086,831...36,090,180
Ensembl chrNW_004624734:36,086,902...36,089,855 		JBrowse link
G Il12b interleukin 12B acts_upstream_of_or_within ISO (PMID:16949315) MGI PMID:16949315 NCBI chrNW_004624733:30,146,050...30,156,144
Ensembl chrNW_004624733:30,146,050...30,154,589 		JBrowse link
G Mkrn2 makorin ring finger protein 2 involved_in ISO (PMID:28378844) UniProt PMID:28378844 NCBI chrNW_004624872:183,421...204,463
Ensembl chrNW_004624872:183,446...204,956 		JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 involved_in ISO (PMID:22763455) CACAO PMID:22763455 NCBI chrNW_004624766:22,143,405...22,150,903 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:16949315) MGI PMID:16949315 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Pomc proopiomelanocortin ISO RGD PMID:17223201 RGD:407574731 NCBI chrNW_004624738:7,442,223...7,448,513
Ensembl chrNW_004624738:7,442,292...7,445,020 		JBrowse link
G Psma1 proteasome 20S subunit alpha 1 involved_in ISO (PMID:12874245) UniProt PMID:12874245 NCBI chrNW_004624766:6,380,057...6,392,408
Ensembl chrNW_004624766:6,380,060...6,392,373 		JBrowse link
G Psmb4 proteasome 20S subunit beta 4 involved_in ISO (PMID:12874245) UniProt PMID:12874245 NCBI chrNW_004624772:19,124,327...19,126,731
Ensembl chrNW_004624772:19,124,386...19,126,627 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:29663649) ARUK-UCL PMID:29663649 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
negative regulation of inflammatory response to wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule involved_in ISO (PMID:19264983) UniProt PMID:19264983 NCBI chrNW_004624780:15,287,426...15,292,292
Ensembl chrNW_004624780:15,287,433...15,292,292 		JBrowse link
G Dsg2 desmoglein 2 involved_in ISO (PMID:38395410) UniProt PMID:38395410 NCBI chrNW_004624770:1,315,021...1,363,472
Ensembl chrNW_004624770:1,313,916...1,364,153 		JBrowse link
G Extl3 exostosin like glycosyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:23,257,623...23,370,782
Ensembl chrNW_004624758:23,324,512...23,368,584 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISO (PMID:32460388) UniProt PMID:32460388 NCBI chrNW_004624786:2,071,376...2,086,929
Ensembl chrNW_004624786:2,071,382...2,086,910 		JBrowse link
G Il17a interleukin 17A involved_in ISO (PMID:27830702) UniProt PMID:27830702 NCBI chrNW_004624855:3,911,349...3,914,214
Ensembl chrNW_004624855:3,911,349...3,913,136 		JBrowse link
G Il33 interleukin 33 involved_in ISO (PMID:27830702) UniProt PMID:27830702 NCBI chrNW_004624736:10,733,944...10,786,188
Ensembl chrNW_004624736:10,764,486...10,784,864 		JBrowse link
G Mdk midkine involved_in ISO (PMID:17015789) UniProt PMID:17015789 NCBI chrNW_004624767:2,171,096...2,173,436
Ensembl chrNW_004624767:2,171,096...2,173,512 		JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 involved_in ISO (PMID:27830702) UniProt PMID:27830702 NCBI chrNW_004624860:3,580,225...3,595,403
Ensembl chrNW_004624860:3,580,560...3,595,090 		JBrowse link
G Siglec10 sialic acid binding Ig like lectin 10 involved_in ISO (PMID:19264983) UniProt PMID:19264983 NCBI chrNW_004624832:3,473,587...3,479,507 JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:27830702) UniProt PMID:27830702 NCBI chrNW_004624795:1,648,235...1,680,788
Ensembl chrNW_004624795:1,648,080...1,681,200 		JBrowse link
negative regulation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23609450) UniProt PMID:23609450 NCBI chrNW_004624751:23,478,263...23,488,834
Ensembl chrNW_004624751:23,478,096...23,483,521 		JBrowse link
G Atg12 autophagy related 12 involved_in ISO (PMID:17709747) ComplexPortal PMID:17709747 NCBI chrNW_004624733:6,046,073...6,056,321
Ensembl chrNW_004624733:6,045,432...6,060,784 		JBrowse link
G Atg5 autophagy related 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624780:15,987,483...16,124,158
Ensembl chrNW_004624780:15,987,397...16,124,151 		JBrowse link
G Aurkb aurora kinase B involved_in ISO (PMID:33542149) UniProt PMID:33542149 NCBI chrNW_004624786:10,769,797...10,775,142
Ensembl chrNW_004624786:10,765,610...10,775,112 		JBrowse link
G Banf1 barrier to autointegration nuclear assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,435,143...20,436,830
Ensembl chrNW_004624767:20,434,955...20,436,640 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:6,313,165...6,322,837
Ensembl chrNW_004624828:6,313,867...6,322,764 		JBrowse link
G Cep63 centrosomal protein 63 involved_in ISO (PMID:35793002) UniProt PMID:35793002 NCBI chrNW_004624730:10,811,159...10,861,973
Ensembl chrNW_004624730:10,817,662...10,864,664 		JBrowse link
G Ddx39a DExD-box helicase 39A involved_in ISO (PMID:32393512) UniProt PMID:32393512 NCBI chrNW_004624901:1,563,557...1,582,502
Ensembl chrNW_004624901:1,563,557...1,582,536 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in ISO (PMID:21525357) UniProt PMID:21525357 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Drd2 dopamine receptor D2 involved_in ISO (PMID:23242137) CACAO PMID:23242137 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529 		JBrowse link
G Dtx4 deltex E3 ubiquitin ligase 4 involved_in ISO (PMID:27692986), (PMID:35793002) UniProt PMID:27692986 PMID:35793002 NCBI chrNW_004624864:1,475,383...1,502,047
Ensembl chrNW_004624864:1,478,059...1,498,066 		JBrowse link
G Grn granulin precursor involved_in ISO (PMID:20026663) UniProt PMID:20026663 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:22842346) UniProt PMID:22842346 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 involved_in ISO (PMID:12150927) BHF-UCL PMID:12150927 NCBI chrNW_004624802:2,042,486...2,098,921
Ensembl chrNW_004624802:2,047,409...2,098,545 		JBrowse link
G LOC101724812 C-C chemokine receptor type 1 involved_in ISO (PMID:15557190) BHF-UCL PMID:15557190 NCBI chrNW_004624730:74,822,848...74,828,614
Ensembl chrNW_004624730:74,826,659...74,827,726 		JBrowse link
G Lyar Ly1 antibody reactive involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624755:21,434,144...21,450,124 JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:5,560,071...5,566,763
Ensembl chrNW_004624764:5,557,560...5,586,964 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:24560620) UniProt PMID:24560620 NCBI chrNW_004624824:1,356,587...1,375,403
Ensembl chrNW_004624824:1,357,326...1,375,688 		JBrowse link
G Nlrx1 NLR family member X1 acts_upstream_of_or_within ISO (PMID:21703540) MGI PMID:21703540 NCBI chrNW_004624784:14,549,926...14,564,028
Ensembl chrNW_004624784:14,549,834...14,563,398 		JBrowse link
G Nmi N-myc and STAT interactor acts_upstream_of_or_within
involved_in		 IEA
ISO		 (PMID:26342464) Ensembl
UniProt		 PMID:26342464 GO_REF:0000107 NCBI chrNW_004624866:4,230,258...4,263,156
Ensembl chrNW_004624866:4,229,535...4,263,688 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:32844745)
(PMID:35460603)		 UniProt PMID:32844745 PMID:35460603 NCBI chrNW_004624807:446,662...478,571
Ensembl chrNW_004624807:446,647...479,069 		JBrowse link
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:37797010) UniProt PMID:37797010 NCBI chrNW_004624754:20,810,398...20,815,182
Ensembl chrNW_004624754:20,808,701...20,815,206 		JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 involved_in ISO (PMID:34811497) UniProt PMID:34811497 NCBI chrNW_004624860:3,580,225...3,595,403
Ensembl chrNW_004624860:3,580,560...3,595,090 		JBrowse link
G Sfn stratifin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:10,859,556...10,860,876
Ensembl chrNW_004624764:10,859,667...10,860,413 		JBrowse link
G Trafd1 TRAF-type zinc finger domain containing 1 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624747:20,034,803...20,057,197 JBrowse link
G Trex1 three prime repair exonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959 		JBrowse link
G Trim21 tripartite motif containing 21 involved_in ISO (PMID:26342464) UniProt PMID:26342464 NCBI chrNW_004624817:5,643,788...5,651,514
Ensembl chrNW_004624817:5,639,779...5,653,361 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in ISO (PMID:18083102) UniProt PMID:18083102 NCBI chrNW_004624804:8,711,487...8,729,025
Ensembl chrNW_004624804:8,710,821...8,728,072 		JBrowse link
G Usp38 ubiquitin specific peptidase 38 involved_in ISO (PMID:27692986) UniProt PMID:27692986 NCBI chrNW_004624853:2,485,347...2,519,165
Ensembl chrNW_004624853:2,485,332...2,518,070 		JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta involved_in ISO (PMID:35662396) UniProt PMID:35662396 NCBI chrNW_004624763:7,722,275...7,723,482 JBrowse link
G Zdhhc18 zDHHC palmitoyltransferase 18 involved_in ISO (PMID:35438208) UniProt PMID:35438208 NCBI chrNW_004624764:10,822,540...10,853,842 JBrowse link
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ackr3 atypical chemokine receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624847:2,189,167...2,200,355
Ensembl chrNW_004624847:2,189,257...2,200,352 		JBrowse link
G Atad5 ATPase family AAA domain containing 5 acts_upstream_of_or_within ISO (PMID:15983387) MGI PMID:15983387 NCBI chrNW_004624875:97,048...154,420
Ensembl chrNW_004624875:97,670...151,080 		JBrowse link
G Bcl2l1 BCL2 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624741:788,445...838,513
Ensembl chrNW_004624741:789,355...839,507 		JBrowse link
G Bid BH3 interacting domain death agonist acts_upstream_of_or_within ISO (PMID:26219591) MGI PMID:26219591 NCBI chrNW_004624735:9,557,732...9,590,862
Ensembl chrNW_004624735:9,579,979...9,589,260 		JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23352644) UniProt PMID:23352644 NCBI chrNW_004624758:18,106,621...18,120,910
Ensembl chrNW_004624758:18,106,606...18,120,907 		JBrowse link
G Cdkn2d cyclin dependent kinase inhibitor 2D involved_in ISO (PMID:15750620) BHF-UCL PMID:15750620 NCBI chrNW_004624828:2,634,347...2,637,123
Ensembl chrNW_004624828:2,634,654...2,636,701 		JBrowse link
G Clu clusterin involved_in ISO (PMID:16113678) BHF-UCL PMID:16113678 NCBI chrNW_004624758:22,431,331...22,444,185
Ensembl chrNW_004624758:22,426,918...22,444,357 		JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 involved_in ISO (PMID:20388803) BHF-UCL PMID:20388803 NCBI chrNW_004624922:1,261,228...1,273,755
Ensembl chrNW_004624922:1,261,228...1,273,758 		JBrowse link
G Ddias DNA damage induced apoptosis suppressor involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004624845:6,946,721...6,973,799
Ensembl chrNW_004624845:6,947,239...6,961,901 		JBrowse link
G LOC101713280 DNA damage-induced apoptosis suppressor protein-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624736:39,217,790...39,224,857 JBrowse link
G Sfrp2 secreted frizzled related protein 2 involved_in ISO (PMID:14561758) BHF-UCL PMID:14561758 NCBI chrNW_004624858:5,052,736...5,061,495
Ensembl chrNW_004624858:5,052,518...5,061,591 		JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:15314165) BHF-UCL PMID:15314165 NCBI chrNW_004624790:5,509,541...5,515,240
Ensembl chrNW_004624790:5,509,311...5,515,266 		JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:15314165) BHF-UCL PMID:15314165 NCBI chrNW_004624735:6,594,564...6,598,288
Ensembl chrNW_004624735:6,594,695...6,598,757 		JBrowse link
G Tmem161a transmembrane protein 161A involved_in ISO (PMID:16551573) BHF-UCL PMID:16551573 NCBI chrNW_004624908:2,056,642...2,064,137
Ensembl chrNW_004624908:2,056,885...2,061,872 		JBrowse link
G Tpt1 tumor protein, translationally-controlled 1 acts_upstream_of_or_within ISO (PMID:11598139) MGI PMID:11598139 NCBI chrNW_004624748:9,657,041...9,660,924
Ensembl chrNW_004624748:9,657,037...9,660,923 		JBrowse link
G Trim32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:18,577,764...18,600,869
Ensembl chrNW_004624760:18,585,279...18,599,659 		JBrowse link
G Usp47 ubiquitin specific peptidase 47 acts_upstream_of_or_within ISO (PMID:19966869) MGI PMID:19966869 NCBI chrNW_004624766:3,913,033...4,038,275
Ensembl chrNW_004624766:3,913,066...4,035,623 		JBrowse link
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family AAA domain containing 5 involved_in ISO (PMID:15983387) UniProt PMID:15983387 NCBI chrNW_004624875:97,048...154,420
Ensembl chrNW_004624875:97,670...151,080 		JBrowse link
G Bcl2l12 BCL2 like 12 acts_upstream_of_or_within ISO (PMID:20837658) MGI PMID:20837658 NCBI chrNW_004624832:4,605,765...4,611,392
Ensembl chrNW_004624832:4,605,821...4,611,366 		JBrowse link
G Cd44 CD44 molecule (IN blood group) involved_in ISO (PMID:17045821) BHF-UCL PMID:17045821 NCBI chrNW_004624767:11,938,452...12,024,970
Ensembl chrNW_004624767:11,938,028...12,025,069 		JBrowse link
G Cd74 CD74 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624774:9,699,876...9,708,871
Ensembl chrNW_004624774:9,700,393...9,709,514 		JBrowse link
G Kdm1a lysine demethylase 1A involved_in ISO (PMID:17805299) BHF-UCL PMID:17805299 NCBI chrNW_004624764:7,664,550...7,742,494 JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 involved_in ISO (PMID:29295817) UniProt PMID:29295817 NCBI chrNW_004624732:5,889,181...5,928,471 JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (PMID:17045821) BHF-UCL PMID:17045821 NCBI chrNW_004624747:10,307,826...10,308,649
Ensembl chrNW_004624747:10,303,919...10,308,821 		JBrowse link
G Muc1 mucin 1, cell surface associated involved_in ISO (PMID:15710329) BHF-UCL PMID:15710329 NCBI chrNW_004624885:2,339,281...2,343,351 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:11672522) BHF-UCL PMID:11672522 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946 		JBrowse link
G Triap1 TP53 regulated inhibitor of apoptosis 1 involved_in ISO (PMID:15735003) BHF-UCL PMID:15735003 NCBI chrNW_004624747:13,220,377...13,223,502 JBrowse link
G Znf385a zinc finger protein 385A involved_in ISO (PMID:17719541) UniProt PMID:17719541 NCBI chrNW_004624904:2,392,425...2,414,806
Ensembl chrNW_004624904:2,392,342...2,414,792 		JBrowse link
negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO (PMID:22711822) BHF-UCL PMID:22711822 NCBI chrNW_004624885:1,314,885...1,362,730
Ensembl chrNW_004624885:1,311,512...1,362,730 		JBrowse link
G Bdkrb2 bradykinin receptor B2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:8,513,601...8,538,838
Ensembl chrNW_004624734:8,513,814...8,539,036 		JBrowse link
G Ptger2 prostaglandin E receptor 2 involved_in ISO (PMID:21716255) CAFA PMID:21716255 NCBI chrNW_004624731:16,729,846...16,741,529
Ensembl chrNW_004624731:16,726,975...16,741,557 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624814:6,897,818...6,904,890
Ensembl chrNW_004624814:6,897,857...6,903,728 		JBrowse link
negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb2 bradykinin receptor B2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:8,513,601...8,538,838
Ensembl chrNW_004624734:8,513,814...8,539,036 		JBrowse link
negative regulation of IRE1-mediated unfolded protein response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bfar bifunctional apoptosis regulator involved_in ISO (PMID:21068390) ParkinsonsUK-UCL PMID:21068390 NCBI chrNW_004624782:3,890,818...3,916,920
Ensembl chrNW_004624782:3,887,129...3,916,858 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:4,292,256...4,305,424
Ensembl chrNW_004624741:4,292,256...4,305,504 		JBrowse link
G Pdia6 protein disulfide isomerase family A member 6 involved_in ISO (PMID:24508390) WB PMID:24508390 NCBI chrNW_004624865:4,695,178...4,711,029
Ensembl chrNW_004624865:4,695,220...4,710,680 		JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in ISO (PMID:19328063) UniProt PMID:19328063 NCBI chrNW_004624816:2,519,839...2,540,766 JBrowse link
G Ufl1 UFM1 specific ligase 1 involved_in ISO (PMID:32160526) UniProt PMID:32160526 NCBI chrNW_004624810:8,804,330...8,832,460
Ensembl chrNW_004624810:8,805,964...8,832,358 		JBrowse link
negative regulation of MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:9,239,119...9,243,617
Ensembl chrNW_004624786:9,239,177...9,243,961 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in ISO (PMID:21187438) UniProt PMID:21187438 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Riok3 RIO kinase 3 involved_in ISO (PMID:25865883) UniProt PMID:25865883 NCBI chrNW_004624770:8,675,501...8,696,999
Ensembl chrNW_004624770:8,675,294...8,697,620 		JBrowse link
G Tkfc triokinase and FMN cyclase involved_in ISO (PMID:17600090) UniProt PMID:17600090 NCBI chrNW_004624926:862,339...870,936
Ensembl chrNW_004624926:862,339...869,926 		JBrowse link
negative regulation of microglial cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst7 cystatin F involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28251676) TreeGrafter
MGI		 PMID:28251676 GO_REF:0000118 NCBI chrNW_004624939:471,699...475,338
Ensembl chrNW_004624939:471,706...475,545 		JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in ISO PMID:19627440 ARUK-UCL PMID:19627440 RGD:13673772 NCBI chrNW_004624746:28,677,956...28,688,638
Ensembl chrNW_004624746:28,677,709...28,689,122 		JBrowse link
G Grn granulin precursor involved_in ISO (PMID:23041626) UniProt PMID:23041626 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO (PMID:20005821) ARUK-UCL PMID:20005821 NCBI chrNW_004624828:2,999,122...3,021,893
Ensembl chrNW_004624828:2,999,169...3,021,987 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:30412727) ARUK-UCL PMID:30412727 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481 		JBrowse link
G Syt11 synaptotagmin 11 involved_in ISO (PMID:28686317) UniProt PMID:28686317 NCBI chrNW_004624885:1,246,768...1,266,418
Ensembl chrNW_004624885:1,246,719...1,266,420 		JBrowse link
G Tafa3 TAFA chemokine like family member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25595455) MGI
TreeGrafter		 PMID:25595455 GO_REF:0000118 NCBI chrNW_004624772:8,495,509...8,505,585
Ensembl chrNW_004624772:8,502,094...8,505,469 		JBrowse link
negative regulation of mitotic DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1r10 protein phosphatase 1 regulatory subunit 10 involved_in ISO (PMID:23426265) BHF-UCL PMID:23426265 NCBI chrNW_004624754:25,074,980...25,091,798
Ensembl chrNW_004624754:25,076,333...25,091,907 		JBrowse link
negative regulation of MyD88-dependent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a CD300a molecule involved_in ISO (PMID:22043923) UniProt PMID:22043923 NCBI chrNW_004624801:4,404,376...4,420,836
Ensembl chrNW_004624801:4,404,262...4,421,097 		JBrowse link
G Cd300lf CD300 molecule like family member f involved_in ISO (PMID:22043923) UniProt PMID:22043923 NCBI chrNW_004624801:4,573,010...4,587,632
Ensembl chrNW_004624801:4,573,010...4,587,592 		JBrowse link
negative regulation of MyD88-independent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sarm1 sterile alpha and TIR motif containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624786:974,785...1,001,810
Ensembl chrNW_004624786:974,876...997,956 		JBrowse link
negative regulation of natural killer cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals9 galectin 9 involved_in ISO (PMID:23408620) UniProt PMID:23408620 NCBI chrNW_004624786:478,048...491,086 JBrowse link
negative regulation of natural killer cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb2 arrestin beta 2 involved_in ISO (PMID:18604210) UniProt PMID:18604210 NCBI chrNW_004624786:8,568,102...8,576,445
Ensembl chrNW_004624786:8,568,198...8,577,914 		JBrowse link
G Clec12b C-type lectin domain family 12 member B involved_in ISO (PMID:17562706) UniProt PMID:17562706 NCBI chrNW_004624752:26,790,063...26,796,279 JBrowse link
G Crk CRK proto-oncogene, adaptor protein ISO RGD PMID:18835194 RGD:11568650 NCBI chrNW_004624786:4,153,783...4,177,611
Ensembl chrNW_004624786:4,153,889...4,177,716 		JBrowse link
G Gfer growth factor, augmenter of liver regeneration ISO RGD PMID:9021955 RGD:9685777 NCBI chrNW_004624913:273,126...276,353
Ensembl chrNW_004624913:273,705...275,693 		JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:5,143,239...5,219,136
Ensembl chrNW_004624801:5,143,141...5,219,244 		JBrowse link
G Igf2 insulin like growth factor 2 ISO RGD PMID:9021955 RGD:9685777 NCBI chrNW_004624767:14,969,977...14,997,577
Ensembl chrNW_004624767:14,969,866...14,979,026 		JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D involved_in ISO (PMID:23154388) UniProt PMID:23154388 NCBI chrNW_004624843:5,685,409...5,774,459
Ensembl chrNW_004624843:5,685,502...5,773,469 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:23408620) UniProt PMID:23408620 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO (PMID:28515320) UniProt PMID:28515320 NCBI chrNW_004624907:1,713,786...1,739,158
Ensembl chrNW_004624907:1,713,443...1,740,627 		JBrowse link
G Nectin4 nectin cell adhesion molecule 4 involved_in ISO (PMID:32503945) UniProt PMID:32503945 NCBI chrNW_004624794:281,769...299,240
Ensembl chrNW_004624794:281,675...299,324 		JBrowse link
G Sh2d1b SH2 domain containing 1B acts_upstream_of_or_within ISO (PMID:16127454) MGI PMID:16127454 NCBI chrNW_004624787:9,077,658...9,078,053 JBrowse link
G Tigit T cell immunoreceptor with Ig and ITIM domains involved_in ISO (PMID:23154388) UniProt PMID:23154388 NCBI chrNW_004624731:34,203,313...34,220,389
Ensembl chrNW_004624731:34,203,346...34,220,389 		JBrowse link
negative regulation of natural killer cell mediated cytotoxicity directed against tumor cell target term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:22842346) UniProt PMID:22842346 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:24586048) ARUK-UCL PMID:24586048 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605 		JBrowse link
negative regulation of neuroinflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd200 CD200 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:36,224,360...36,251,656
Ensembl chrNW_004624731:36,223,673...36,251,542 		JBrowse link
G Ifnb1 interferon beta 1 ISO RGD PMID:12973019 RGD:401851924 NCBI chrNW_004624736:25,099,061...25,099,746 JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (PMID:27277332) ARUK-UCL PMID:27277332 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:30412727) ARUK-UCL PMID:30412727 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481 		JBrowse link
G Sbno1 strawberry notch homolog 1 involved_in ISO (PMID:39343943) UniProt PMID:39343943 NCBI chrNW_004624747:23,214,619...23,275,928 JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:894,470...922,806
Ensembl chrNW_004624818:896,150...922,710 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:32514138)
(PMID:31134514), (PMID:31900229)
(PMID:29407460)		 ARUK-UCL PMID:29407460 PMID:31134514 PMID:31900229 PMID:32514138 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
negative regulation of neuron projection regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Diaph1 diaphanous related formin 1 acts_upstream_of_or_within ISO (PMID:23890216) MGI PMID:23890216 NCBI chrNW_004624774:738,717...845,187
Ensembl chrNW_004624774:739,206...845,272 		JBrowse link
G Diaph2 diaphanous related formin 2 acts_upstream_of_or_within ISO (PMID:23890216) MGI PMID:23890216 NCBI chrNW_004624851:3,291,888...4,329,285 JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 ISO RGD PMID:18007665 RGD:2303352 NCBI chrNW_004624749:6,332,686...6,495,942
Ensembl chrNW_004624749:6,332,534...6,495,942 		JBrowse link
G Rtn4 reticulon 4 ISO RGD PMID:18973596 RGD:2314943 NCBI chrNW_004624833:6,514,409...6,584,061 JBrowse link
G Thy1 Thy-1 cell surface antigen acts_upstream_of_or_within_positive_effect
involved_in		 ISO PMID:22479590
(PMID:22479590)		 UniProt PMID:22479590 RGD:12793046 NCBI chrNW_004624784:14,779,533...14,784,315
Ensembl chrNW_004624784:14,780,698...14,784,897 		JBrowse link
negative regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnaja1 DnaJ heat shock protein family (Hsp40) member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:37,780,852...37,793,594
Ensembl chrNW_004624736:37,780,867...37,793,594 		JBrowse link
G LOC101723341 dnaJ homolog subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624755:5,032,338...5,033,795 JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:14752510) ParkinsonsUK-UCL PMID:14752510 NCBI chrNW_004624818:3,900,917...3,915,457
Ensembl chrNW_004624818:3,900,917...3,911,042 		JBrowse link
negative regulation of NLRP3 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17a abhydrolase domain containing 17A, depalmitoylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624828:6,915,126...6,923,433
Ensembl chrNW_004624828:6,917,061...6,923,433 		JBrowse link
G Abhd8 abhydrolase domain containing 8 involved_in ISO (PMID:39225180) UniProt PMID:39225180 NCBI chrNW_004624908:641,181...648,366
Ensembl chrNW_004624908:641,841...647,877 		JBrowse link
G Cptp ceramide-1-phosphate transfer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624818:8,283,925...8,287,410
Ensembl chrNW_004624818:8,283,926...8,287,274 		JBrowse link
G Csnk1a1 casein kinase 1 alpha 1 involved_in ISO (PMID:34615873) UniProt PMID:34615873 NCBI chrNW_004624774:8,815,021...8,862,657
Ensembl chrNW_004624774:8,815,023...8,862,878 		JBrowse link
G Fbxl2 F-box and leucine rich repeat protein 2 involved_in ISO (PMID:26037928) UniProt PMID:26037928 NCBI chrNW_004624788:11,253,912...11,350,045
Ensembl chrNW_004624788:11,253,934...11,349,137 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISO (PMID:36586411) UniProt PMID:36586411 NCBI chrNW_004624880:2,070,410...2,075,069
Ensembl chrNW_004624880:2,070,523...2,079,421 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:30612879) UniProt PMID:30612879 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Lamp2 lysosomal associated membrane protein 2 involved_in ISO (PMID:36586411) UniProt PMID:36586411 NCBI chrNW_004624931:297,864...343,314
Ensembl chrNW_004624931:298,328...343,915 		JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:1,035,172...1,047,632
Ensembl chrNW_004624824:1,035,094...1,047,678 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:25277106) UniProt PMID:25277106 NCBI chrNW_004624824:1,356,587...1,375,403
Ensembl chrNW_004624824:1,357,326...1,375,688 		JBrowse link
G Sirt2 sirtuin 2 acts_upstream_of_or_within ISO (PMID:23502856) MGI PMID:23502856 NCBI chrNW_004624794:12,239,363...12,259,561
Ensembl chrNW_004624794:12,235,263...12,259,276 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 acts_upstream_of_or_within ISO (PMID:32514138)
(PMID:29887864)		 ARUK-UCL PMID:29887864 PMID:32514138 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
G Trim65 tripartite motif containing 65 involved_in ISO (PMID:34512673) UniProt PMID:34512673 NCBI chrNW_004624801:5,779,009...5,783,542 JBrowse link
G Zdhhc12 zDHHC palmitoyltransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:6,273,989...6,276,788
Ensembl chrNW_004624760:6,273,994...6,276,776 		JBrowse link
negative regulation of non-canonical inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:37962578) UniProt PMID:37962578 NCBI chrNW_004624903:1,863,110...1,912,299
Ensembl chrNW_004624903:1,863,337...1,910,177 		JBrowse link
negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbin erbb2 interacting protein involved_in ISO (PMID:16203728) UniProt PMID:16203728 NCBI chrNW_004624815:3,765,261...3,901,309
Ensembl chrNW_004624815:3,768,207...3,852,815 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990 		JBrowse link
G Znrf4 zinc and ring finger 4 involved_in ISO (PMID:28656966) UniProt PMID:28656966 NCBI chrNW_004624828:4,633,434...4,635,366 JBrowse link
negative regulation of optical nerve axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtca RNA 3'-terminal phosphate cyclase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624857:3,138,578...3,176,170
Ensembl chrNW_004624857:3,144,694...3,172,433 		JBrowse link
negative regulation of PERK-mediated unfolded protein response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISO (PMID:27030769) ARUK-UCL PMID:27030769 NCBI chrNW_004624828:7,572,821...7,592,428
Ensembl chrNW_004624828:7,573,130...7,591,038 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:21954288) UniProt PMID:21954288 NCBI chrNW_004624734:507,880...525,295
Ensembl chrNW_004624734:509,368...525,295 		JBrowse link
G Akt2 AKT serine/threonine kinase 2 involved_in ISO (PMID:21954288) UniProt PMID:21954288 NCBI chrNW_004624925:262,590...322,440
Ensembl chrNW_004624925:273,881...326,984 		JBrowse link
G Akt3 AKT serine/threonine kinase 3 involved_in ISO (PMID:21954288) UniProt PMID:21954288 NCBI chrNW_004624771:15,639,018...15,896,590
Ensembl chrNW_004624771:15,648,638...15,896,590 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:30842412) UniProt PMID:30842412 NCBI chrNW_004624741:4,292,256...4,305,424
Ensembl chrNW_004624741:4,292,256...4,305,504 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (PMID:11907036) UniProt PMID:11907036 NCBI chrNW_004624760:9,986,529...9,991,261
Ensembl chrNW_004624760:9,986,656...9,995,252 		JBrowse link
G LOC101709814 ATPase family AAA domain-containing protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624818:8,183,454...8,199,196
Ensembl chrNW_004624818:8,183,823...8,199,086 		JBrowse link
G Nck1 NCK adaptor protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:13,271,575...13,366,930
Ensembl chrNW_004624730:13,226,315...13,366,661 		JBrowse link
G Nck2 NCK adaptor protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:9,765,308...9,884,472 JBrowse link
G Ptpn1 protein tyrosine phosphatase non-receptor type 1 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624790:5,070,537...5,135,243
Ensembl chrNW_004624790:5,073,476...5,135,181 		JBrowse link
negative regulation of platelet activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:8995232) BHF-UCL PMID:8995232 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G C1qtnf1 C1q and TNF related 1 involved_in ISO (PMID:16195328) UniProt PMID:16195328 NCBI chrNW_004624801:8,349,894...8,368,168
Ensembl chrNW_004624801:8,349,713...8,368,421 		JBrowse link
G Gp5 glycoprotein V platelet acts_upstream_of_or_within ISO (PMID:10557321), (PMID:11435305) MGI PMID:10557321 PMID:11435305 NCBI chrNW_004624730:63,381,060...63,383,193 JBrowse link
G Pdgfa platelet derived growth factor subunit A involved_in ISO (PMID:2538439) BHF-UCL PMID:2538439 NCBI chrNW_004624740:26,172,808...26,191,557
Ensembl chrNW_004624740:26,169,064...26,188,866 		JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISO (PMID:2538439) BHF-UCL PMID:2538439 NCBI chrNW_004624752:9,072,471...9,088,289
Ensembl chrNW_004624752:9,072,512...9,088,593 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in ISO (PMID:8188664) UniProt PMID:8188664 NCBI chrNW_004624761:15,223,789...15,269,685
Ensembl chrNW_004624761:15,225,356...15,269,810 		JBrowse link
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:19855083) BHF-UCL
MGI		 PMID:19855083 NCBI chrNW_004624823:1,261,458...1,326,261
Ensembl chrNW_004624823:1,261,406...1,326,917 		JBrowse link
negative regulation of platelet aggregation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif 18 acts_upstream_of_or_within ISO (PMID:19218546) MGI PMID:19218546 NCBI chrNW_004624746:9,336,284...9,667,389
Ensembl chrNW_004624746:9,530,093...9,669,129 		JBrowse link
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:9,542,966...9,555,235
Ensembl chrNW_004624786:9,542,970...9,555,214 		JBrowse link
G C1qtnf1 C1q and TNF related 1 involved_in ISO (PMID:16195328) UniProt PMID:16195328 NCBI chrNW_004624801:8,349,894...8,368,168
Ensembl chrNW_004624801:8,349,713...8,368,421 		JBrowse link
G Cd9 CD9 molecule involved_in ISO (PMID:18541721) UniProt PMID:18541721 NCBI chrNW_004624860:3,027,126...3,055,974
Ensembl chrNW_004624860:3,027,029...3,056,798 		JBrowse link
G Prkcd protein kinase C delta involved_in ISO (PMID:16940418) UniProt PMID:16940418 NCBI chrNW_004624822:4,035,819...4,062,907
Ensembl chrNW_004624822:4,033,130...4,059,555 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 involved_in ISO (PMID:16990611) UniProt PMID:16990611 NCBI chrNW_004624791:11,334,146...12,656,480
Ensembl chrNW_004624791:11,338,510...12,654,812 		JBrowse link
G Serpine2 serpin family E member 2 involved_in ISO (PMID:19855083) BHF-UCL PMID:19855083 NCBI chrNW_004624823:1,261,458...1,326,261
Ensembl chrNW_004624823:1,261,406...1,326,917 		JBrowse link
G Sh2b3 SH2B adaptor protein 3 involved_in ISO (PMID:27430239) BHF-UCL PMID:27430239 NCBI chrNW_004624747:20,729,142...20,759,631
Ensembl chrNW_004624747:20,730,751...20,759,625 		JBrowse link
G Tmx1 thioredoxin related transmembrane protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:17,713,812...17,730,521
Ensembl chrNW_004624731:17,718,868...17,730,586 		JBrowse link
G Ubash3b ubiquitin associated and SH3 domain containing B acts_upstream_of_or_within ISO (PMID:20585042) MGI PMID:20585042 NCBI chrNW_004624880:2,269,247...2,427,531
Ensembl chrNW_004624880:2,270,679...2,427,298 		JBrowse link
negative regulation of protection from non-homologous end joining at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:14690602) BHF-UCL PMID:14690602 NCBI chrNW_004624907:2,288,380...2,298,909
Ensembl chrNW_004624907:2,288,423...2,298,373 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:14690602) BHF-UCL PMID:14690602 NCBI chrNW_004624782:4,508,758...4,537,751
Ensembl chrNW_004624782:4,512,650...4,537,701 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624907:1,087,611...1,113,275
Ensembl chrNW_004624907:1,087,611...1,113,266 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in ISO (PMID:14690602) BHF-UCL PMID:14690602 NCBI chrNW_004624743:3,299,329...3,549,182
Ensembl chrNW_004624743:3,317,351...3,552,161 		JBrowse link
negative regulation of respiratory burst involved in inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dusp10 dual specificity phosphatase 10 acts_upstream_of_or_within ISO (PMID:19696743) MGI PMID:19696743 NCBI chrNW_004624835:4,751,651...4,783,916
Ensembl chrNW_004624835:4,750,077...4,782,249 		JBrowse link
G Grn granulin precursor involved_in ISO (PMID:12526812) UniProt PMID:12526812 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165 		JBrowse link
G Ins insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:14,999,088...15,000,035
Ensembl chrNW_004624767:14,999,088...15,000,035 		JBrowse link
G Rps19 ribosomal protein S19 involved_in ISO (PMID:15750715) UniProt PMID:15750715 NCBI chrNW_004624907:811,069...818,218
Ensembl chrNW_004624907:810,984...818,614 		JBrowse link
G Slamf8 SLAM family member 8 acts_upstream_of_or_within ISO (PMID:25799045) MGI PMID:25799045 NCBI chrNW_004624794:1,418,727...1,428,836
Ensembl chrNW_004624794:1,418,228...1,429,561 		JBrowse link
negative regulation of response to endoplasmic reticulum stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in ISO (PMID:28694473) UniProt PMID:28694473 NCBI chrNW_004624966:168,244...220,430
Ensembl chrNW_004624966:168,250...220,522 		JBrowse link
G Aqp11 aquaporin 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624863:679,049...694,765
Ensembl chrNW_004624863:678,953...694,505 		JBrowse link
G Clu clusterin involved_in ISO (PMID:21803450) ARUK-UCL PMID:21803450 NCBI chrNW_004624758:22,431,331...22,444,185
Ensembl chrNW_004624758:22,426,918...22,444,357 		JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISO (PMID:24206663) UniProt PMID:24206663 NCBI chrNW_004624860:3,611,300...3,642,682
Ensembl chrNW_004624860:3,611,300...3,642,686 		JBrowse link
G Nr1h2 nuclear receptor subfamily 1 group H member 2 involved_in ISO (PMID:24206663) UniProt PMID:24206663 NCBI chrNW_004624832:4,136,052...4,141,648
Ensembl chrNW_004624832:4,132,904...4,140,896 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 involved_in ISO (PMID:24206663) UniProt PMID:24206663 NCBI chrNW_004624767:1,459,601...1,473,224
Ensembl chrNW_004624767:1,459,601...1,467,795 		JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in ISO (PMID:23035048) UniProt PMID:23035048 NCBI chrNW_004624755:22,818,653...22,841,717
Ensembl chrNW_004624755:22,824,143...22,841,850 		JBrowse link
negative regulation of response to oxidative stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggt7 gamma-glutamyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624842:4,526,618...4,551,644
Ensembl chrNW_004624842:4,526,536...4,554,253 		JBrowse link
G Keap1 kelch like ECH associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624828:2,580,812...2,595,023
Ensembl chrNW_004624828:2,580,861...2,595,275 		JBrowse link
G LOC101706296 core histone macro-H2A.1 involved_in ISO (PMID:23022728) UniProt PMID:23022728 NCBI chrNW_004624733:11,650,067...11,714,399
Ensembl chrNW_004624733:11,650,537...11,715,999 		JBrowse link
G Mctp1 multiple C2 and transmembrane domain containing 1 involved_in ISO PMID:26195140 UniProt PMID:26195140 RGD:13210552 NCBI chrNW_004624743:13,401,767...13,919,388
Ensembl chrNW_004624743:13,405,481...13,919,373 		JBrowse link
G Rbx1 ring-box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:7,547,702...7,560,605
Ensembl chrNW_004624752:7,546,959...7,560,668 		JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO (PMID:37339955) UniProt PMID:37339955 NCBI chrNW_004624745:4,170,328...4,306,604
Ensembl chrNW_004624745:4,169,938...4,305,122 		JBrowse link
negative regulation of response to reactive oxygen species term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I ISO cytoprotective hop2 splice variant RGD PMID:16905223 RGD:2315974 NCBI chrNW_004624783:271,179...323,785
Ensembl chrNW_004624783:279,745...323,772 		JBrowse link
negative regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:9,239,119...9,243,617
Ensembl chrNW_004624786:9,239,177...9,243,961 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Gpatch3 G-patch domain containing 3 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624764:10,879,342...10,889,175
Ensembl chrNW_004624764:10,879,556...10,889,146 		JBrowse link
G Nlrx1 NLR family member X1 acts_upstream_of_or_within ISO (PMID:21703540) MGI PMID:21703540 NCBI chrNW_004624784:14,549,926...14,564,028
Ensembl chrNW_004624784:14,549,834...14,563,398 		JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor involved_in ISO (PMID:26471729) UniProt PMID:26471729 NCBI chrNW_004624801:10,531,107...10,589,502
Ensembl chrNW_004624801:10,533,064...10,589,096 		JBrowse link
G Rnf125 ring finger protein 125 involved_in ISO (PMID:17460044), (PMID:26471729) UniProt PMID:17460044 PMID:26471729 NCBI chrNW_004624770:909,808...942,386 JBrowse link
G Sec14l1 SEC14 like lipid binding 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:6,890,278...6,942,724
Ensembl chrNW_004624801:6,890,134...6,945,443 		JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:110,090...132,145
Ensembl chrNW_004624747:110,090...132,097 		JBrowse link
negative regulation of skeletal muscle tissue regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myoz1 myozenin 1 involved_in ISO (PMID:18846255) BHF-UCL PMID:18846255 NCBI chrNW_004624754:7,236,756...7,243,659
Ensembl chrNW_004624754:7,236,782...7,243,635 		JBrowse link
negative regulation of stress-activated MAPK cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dusp10 dual specificity phosphatase 10 acts_upstream_of_or_within ISO (PMID:19696743) MGI PMID:19696743 NCBI chrNW_004624835:4,751,651...4,783,916
Ensembl chrNW_004624835:4,750,077...4,782,249 		JBrowse link
G Foxm1 forkhead box M1 involved_in ISO (PMID:19696738) BHF-UCL PMID:19696738 NCBI chrNW_004624860:206,367...222,035
Ensembl chrNW_004624860:207,242...219,959 		JBrowse link
G Foxo1 forkhead box O1 involved_in ISO (PMID:19696738) BHF-UCL PMID:19696738 NCBI chrNW_004624748:1,413,754...1,529,646
Ensembl chrNW_004624748:1,413,983...1,529,992 		JBrowse link
G Igbp1 immunoglobulin binding protein 1 involved_in ISO (PMID:17438131) UniProt PMID:17438131 NCBI chrNW_004624903:71,212...94,470 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:19545562) UniProt PMID:19545562 NCBI chrNW_004624735:27,780,338...27,784,714
Ensembl chrNW_004624735:27,780,037...27,784,806 		JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within ISO (PMID:21715333) MGI PMID:21715333 NCBI chrNW_004624758:22,603,076...22,625,817
Ensembl chrNW_004624758:22,603,039...22,625,763 		JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:26095851) UniProt PMID:26095851 NCBI chrNW_004624740:7,447,554...7,450,707
Ensembl chrNW_004624740:7,447,554...7,450,641 		JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 involved_in ISO (PMID:11096076) CAFA PMID:11096076 NCBI chrNW_004624730:3,123,877...3,130,787
Ensembl chrNW_004624730:3,120,958...3,130,757 		JBrowse link
negative regulation of stress-activated protein kinase signaling cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:35857590) UniProt PMID:35857590 NCBI chrNW_004624787:10,392,738...10,566,563
Ensembl chrNW_004624787:10,405,701...10,565,943 		JBrowse link
negative regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:22579284) BHF-UCL PMID:22579284 NCBI chrNW_004624741:29,303,844...29,344,123
Ensembl chrNW_004624741:29,304,427...29,343,842 		JBrowse link
negative regulation of toll-like receptor 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23609450) UniProt PMID:23609450 NCBI chrNW_004624751:23,478,263...23,488,834
Ensembl chrNW_004624751:23,478,096...23,483,521 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624886:4,029,318...4,168,797
Ensembl chrNW_004624886:4,027,178...4,168,902 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (PMID:26599367) UniProt PMID:26599367 NCBI chrNW_004624839:4,908,861...5,000,218
Ensembl chrNW_004624839:4,908,639...5,000,677 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:15220916) MGI PMID:15220916 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (PMID:22198949) ARUK-UCL PMID:22198949 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:31134514) ARUK-UCL PMID:31134514 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
negative regulation of toll-like receptor 3 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:19865078) UniProt PMID:19865078 NCBI chrNW_004624869:1,326,605...1,337,195 JBrowse link
G Ubqln1 ubiquilin 1 involved_in ISO (PMID:21695056) CACAO PMID:21695056 NCBI chrNW_004624809:6,434,842...6,487,442
Ensembl chrNW_004624809:6,436,658...6,487,251 		JBrowse link
negative regulation of toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23609450) UniProt PMID:23609450 NCBI chrNW_004624751:23,478,263...23,488,834
Ensembl chrNW_004624751:23,478,096...23,483,521 		JBrowse link
G Bpifb1 BPI fold containing family B member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624842:5,951,202...5,972,212
Ensembl chrNW_004624842:5,951,203...5,972,212 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO (PMID:19948740) UniProt PMID:19948740 NCBI chrNW_004624760:13,472,500...13,658,070
Ensembl chrNW_004624760:13,472,672...13,657,930 		JBrowse link
G LOC101722352 TIR domain-containing adapter molecule 2 involved_in ISO (PMID:19412184) UniProt PMID:19412184 NCBI chrNW_004624733:6,304,454...6,341,827 JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624886:4,029,318...4,168,797
Ensembl chrNW_004624886:4,027,178...4,168,902 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (PMID:28609714) UniProt PMID:28609714 NCBI chrNW_004624839:4,908,861...5,000,218
Ensembl chrNW_004624839:4,908,639...5,000,677 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497 		JBrowse link
G Rab7b RAB7B, member RAS oncogene family involved_in ISO (PMID:17395780) UniProt PMID:17395780 NCBI chrNW_004624807:5,307,361...5,334,578
Ensembl chrNW_004624807:5,307,440...5,334,945 		JBrowse link
G Sqstm1 sequestosome 1 involved_in ISO (PMID:31281713) UniProt PMID:31281713 NCBI chrNW_004624733:42,689,454...42,700,916
Ensembl chrNW_004624733:42,691,841...42,700,916 		JBrowse link
G Tax1bp1 Tax1 binding protein 1 involved_in ISO (PMID:28898289) UniProt PMID:28898289 NCBI chrNW_004624739:2,800,453...2,894,355
Ensembl chrNW_004624739:2,801,301...2,885,094 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:31134514)
(PMID:29407460)		 ARUK-UCL PMID:29407460 PMID:31134514 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
G Trim32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:18,577,764...18,600,869
Ensembl chrNW_004624760:18,585,279...18,599,659 		JBrowse link
negative regulation of toll-like receptor 9 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gramd4 GRAM domain containing 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:3,328,132...3,401,027
Ensembl chrNW_004624752:3,330,905...3,400,977 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISO (PMID:14716310) UniProt PMID:14716310 NCBI chrNW_004624764:22,542,892...22,577,077
Ensembl chrNW_004624764:22,543,857...22,577,121 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S involved_in ISO (PMID:26231120) UniProt PMID:26231120 NCBI chrNW_004624828:4,688,555...4,764,805
Ensembl chrNW_004624828:4,716,249...4,764,614 		JBrowse link
G Rab7b RAB7B, member RAS oncogene family involved_in ISO (PMID:19587007) UniProt PMID:19587007 NCBI chrNW_004624807:5,307,361...5,334,578
Ensembl chrNW_004624807:5,307,440...5,334,945 		JBrowse link
negative regulation of toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb2 arrestin beta 2 involved_in ISO (PMID:16378096) UniProt PMID:16378096 NCBI chrNW_004624786:8,568,102...8,576,445
Ensembl chrNW_004624786:8,568,198...8,577,914 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004624828:6,313,165...6,322,837
Ensembl chrNW_004624828:6,313,867...6,322,764 		JBrowse link
G Gpr108 G protein-coupled receptor 108 involved_in ISO (PMID:30332431) UniProt PMID:30332431 NCBI chrNW_004624828:3,805,151...3,812,113
Ensembl chrNW_004624828:3,805,366...3,812,055 		JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in ISO (PMID:28039360) UniProt PMID:28039360 NCBI chrNW_004624786:9,938,384...9,941,210
Ensembl chrNW_004624786:9,938,384...9,941,235 		JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 involved_in ISO (PMID:12150927) BHF-UCL PMID:12150927 NCBI chrNW_004624802:2,042,486...2,098,921
Ensembl chrNW_004624802:2,047,409...2,098,545 		JBrowse link
G Irf4 interferon regulatory factor 4 acts_upstream_of_or_within ISO (PMID:16236719) MGI PMID:16236719 NCBI chrNW_004624756:23,917,111...23,931,482
Ensembl chrNW_004624756:23,918,323...23,931,501 		JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in ISO (PMID:23589304) UniProt PMID:23589304 NCBI chrNW_004624766:17,110,809...17,147,585
Ensembl chrNW_004624766:17,112,909...17,147,785 		JBrowse link
G Lrrc14 leucine rich repeat containing 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624735:12,337,564...12,345,260 JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:24,639,757...24,652,059
Ensembl chrNW_004624754:24,639,860...24,649,968 		JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 acts_upstream_of_or_within ISO (PMID:22763455) MGI PMID:22763455 NCBI chrNW_004624766:22,143,405...22,150,903 JBrowse link
G Otud4 OTU deubiquitinase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624853:4,091,591...4,145,344
Ensembl chrNW_004624853:4,091,316...4,140,201 		JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:279,893...383,220
Ensembl chrNW_004624824:293,374...383,156 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in ISO (PMID:20728433) UniProt PMID:20728433 NCBI chrNW_004624737:8,021,478...8,154,543
Ensembl chrNW_004624737:8,022,836...8,154,422 		JBrowse link
G Rnf115 ring finger protein 115 involved_in ISO (PMID:35343654) UniProt PMID:35343654 NCBI chrNW_004624772:17,099,593...17,196,258
Ensembl chrNW_004624772:17,104,189...17,196,326 		JBrowse link
G Smpdl3b sphingomyelin phosphodiesterase acid like 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:11,785,739...11,807,351
Ensembl chrNW_004624764:11,785,640...11,807,084 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in ISO (PMID:18083102) UniProt PMID:18083102 NCBI chrNW_004624804:8,711,487...8,729,025
Ensembl chrNW_004624804:8,710,821...8,728,072 		JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon involved_in ISO (PMID:35343654) UniProt PMID:35343654 NCBI chrNW_004624786:4,080,650...4,135,200
Ensembl chrNW_004624786:4,080,427...4,135,459 		JBrowse link
negative regulation of type I hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (PMID:8552190) MGI PMID:8552190 NCBI chrNW_004624826:97,605...112,101 JBrowse link
negative regulation of type I interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase RNA specific acts_upstream_of_or_within ISO (PMID:19060901) MGI PMID:19060901 NCBI chrNW_004624885:2,783,058...2,839,688
Ensembl chrNW_004624885:2,812,448...2,839,693 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004624828:6,313,165...6,322,837
Ensembl chrNW_004624828:6,313,867...6,322,764 		JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:23386060) UniProt PMID:23386060 NCBI chrNW_004624769:22,047,177...22,065,314
Ensembl chrNW_004624769:22,046,526...22,065,339 		JBrowse link
G Dcst1 DC-STAMP domain containing 1 involved_in ISO (PMID:27782195) UniProt PMID:27782195 NCBI chrNW_004624885:2,451,247...2,465,459
Ensembl chrNW_004624885:2,451,404...2,465,397 		JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 involved_in ISO (PMID:35878012) UniProt PMID:35878012 NCBI chrNW_004624843:5,303,157...5,332,228
Ensembl chrNW_004624843:5,303,172...5,332,228 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in ISO (PMID:35878012) UniProt PMID:35878012 NCBI chrNW_004624843:5,391,725...5,538,980
Ensembl chrNW_004624843:5,420,352...5,537,217 		JBrowse link
G Isg15 ISG15 ubiquitin like modifier involved_in ISO (PMID:28724761) ARUK-UCL PMID:28724761 NCBI chrNW_004624818:8,510,657...8,511,749 JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624825:7,513,481...7,527,716
Ensembl chrNW_004624825:7,513,481...7,527,695 		JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in ISO (PMID:24784232) CAFA PMID:24784232 NCBI chrNW_004624878:6,017...17,368
Ensembl chrNW_004624878:6,035...17,445 		JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:5,560,071...5,566,763
Ensembl chrNW_004624764:5,557,560...5,586,964 		JBrowse link
G Nlrc5 NLR family CARD domain containing 5 involved_in ISO (PMID:20434986) UniProt PMID:20434986 NCBI chrNW_004624746:28,954,009...29,030,337
Ensembl chrNW_004624746:28,954,016...29,030,322 		JBrowse link
G Oas1 2'-5'-oligoadenylate synthetase 1 involved_in ISO (PMID:30078389) ARUK-UCL PMID:30078389 NCBI chrNW_004624747:19,428,994...19,434,512
Ensembl chrNW_004624747:19,428,833...19,434,550 		JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (PMID:11909529)
(PMID:11909529), (PMID:12138178)		 UniProt PMID:11909529 PMID:12138178 NCBI chrNW_004624770:19,808,400...19,877,494
Ensembl chrNW_004624770:19,808,400...19,876,503 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:29670289)
(PMID:23972988)		 UniProt PMID:23972988 PMID:29670289 NCBI chrNW_004624842:2,591,016...2,649,746
Ensembl chrNW_004624842:2,591,148...2,647,742 		JBrowse link
G SMIM30 small integral membrane protein 30 involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004624827:6,244,828...6,245,007 JBrowse link
G Stat2 signal transducer and activator of transcription 2 involved_in ISO (PMID:28165510) UniProt PMID:28165510 NCBI chrNW_004624802:11,645,851...11,662,812
Ensembl chrNW_004624802:11,648,020...11,660,216 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959 		JBrowse link
G Ttll12 tubulin tyrosine ligase like 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:5,796,935...5,813,078
Ensembl chrNW_004624752:5,796,958...5,813,075 		JBrowse link
G Usp18 ubiquitin specific peptidase 18 involved_in ISO (PMID:28165510) UniProt PMID:28165510 NCBI chrNW_004624735:9,158,597...9,187,503 JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO (PMID:30559377) UniProt PMID:30559377 NCBI chrNW_004624764:12,533,317...12,567,514
Ensembl chrNW_004624764:12,533,257...12,567,514 		JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624744:28,558,988...28,597,302
Ensembl chrNW_004624744:28,558,209...28,597,065 		JBrowse link
negative regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in ISO (PMID:16709924) UniProt PMID:16709924 NCBI chrNW_004624753:5,737,720...5,749,313
Ensembl chrNW_004624753:5,737,237...5,752,966 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (PMID:11679576) UniProt PMID:11679576 NCBI chrNW_004624824:2,215,337...2,259,696
Ensembl chrNW_004624824:2,214,240...2,259,696 		JBrowse link
G Otop1 otopetrin 1 involved_in ISO (PMID:24379350) UniProt PMID:24379350 NCBI chrNW_004624755:21,377,288...21,403,621
Ensembl chrNW_004624755:21,377,721...21,403,621 		JBrowse link
G Parp14 poly(ADP-ribose) polymerase family member 14 involved_in ISO (PMID:27796300) UniProt PMID:27796300 NCBI chrNW_004624912:969,144...1,022,506
Ensembl chrNW_004624912:969,236...1,023,564 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:21268089) BHF-UCL PMID:21268089 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481 		JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in
NOT|involved_in		 ISO (PMID:12138178) UniProt PMID:12138178 NCBI chrNW_004624770:19,808,400...19,877,494
Ensembl chrNW_004624770:19,808,400...19,876,503 		JBrowse link
negative regulation of type IV hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il20rb interleukin 20 receptor subunit beta acts_upstream_of_or_within ISO (PMID:19124723) MGI PMID:19124723 NCBI chrNW_004624730:13,371,898...13,408,927
Ensembl chrNW_004624730:13,378,478...13,409,676 		JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO (PMID:9645617) MGI PMID:9645617 NCBI chrNW_004624782:13,471,083...13,483,712 JBrowse link
negative regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in ISO (PMID:24226420) UniProt PMID:24226420 NCBI chrNW_004624966:168,244...220,430
Ensembl chrNW_004624966:168,250...220,522 		JBrowse link
G Serpine1 serpin family E member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:16,128,145...16,136,696
Ensembl chrNW_004624740:16,128,059...16,137,337 		JBrowse link
G Slc12a2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (PMID:28577991) ARUK-UCL PMID:28577991 NCBI chrNW_004624774:13,236,306...13,335,412 JBrowse link
G Tafa5 TAFA chemokine like family member 5 acts_upstream_of_or_within ISO PMID:29453251
(PMID:29453251)		 MGI PMID:29453251 RGD:42721986 NCBI chrNW_004624752:1,649,875...1,754,591
Ensembl chrNW_004624752:1,649,367...1,754,681 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:22499991) BHF-UCL PMID:22499991 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531 		JBrowse link
negative regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajap1 adherens junctions associated protein 1 involved_in ISO (PMID:16410724) UniProt PMID:16410724 NCBI chrNW_004624818:6,214,846...6,318,347
Ensembl chrNW_004624818:6,214,907...6,318,333 		JBrowse link
G Alox5 arachidonate 5-lipoxygenase involved_in ISO (PMID:24226420), (PMID:28965882) UniProt PMID:24226420 PMID:28965882 NCBI chrNW_004624966:168,244...220,430
Ensembl chrNW_004624966:168,250...220,522 		JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:13,723,347...14,106,844
Ensembl chrNW_004624762:13,722,691...14,106,844 		JBrowse link
G Cd109 CD109 molecule involved_in ISO (PMID:16754747) UniProt PMID:16754747 NCBI chrNW_004624819:861,095...1,013,674
Ensembl chrNW_004624819:862,194...1,009,755 		JBrowse link
G Crk CRK proto-oncogene, adaptor protein involved_in ISO (PMID:17515907) CAFA PMID:17515907 NCBI chrNW_004624786:4,153,783...4,177,611
Ensembl chrNW_004624786:4,153,889...4,177,716 		JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) UniProt PMID:19577615 NCBI chrNW_004624777:3,268,674...3,321,424
Ensembl chrNW_004624777:3,268,953...3,321,145 		JBrowse link
G Mmrn1 multimerin 1 involved_in ISO (PMID:19132231)
(PMID:20138333)		 ComplexPortal PMID:19132231 PMID:20138333 NCBI chrNW_004624757:17,652,112...17,721,030
Ensembl chrNW_004624757:17,628,421...17,724,327 		JBrowse link
G Muc16 mucin 16, cell surface associated acts_upstream_of_or_within ISO (PMID:24812549) MGI PMID:24812549 NCBI chrNW_004624828:1,510,104...1,579,727 JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (PMID:10559937), (PMID:14617288), (PMID:21035443) UniProt PMID:10559937 PMID:14617288 PMID:21035443 NCBI chrNW_004624781:5,795,652...5,890,047
Ensembl chrNW_004624781:5,795,652...5,890,371 		JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO (PMID:23027131) BHF-UCL PMID:23027131 NCBI chrNW_004624764:6,913,027...6,934,650
Ensembl chrNW_004624764:6,921,811...6,933,392 		JBrowse link
negative regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chrNW_004624732:23,553,876...23,814,565
Ensembl chrNW_004624732:23,581,356...23,811,640 		JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chrNW_004624788:11,441,840...11,657,515
Ensembl chrNW_004624788:11,441,747...11,573,029 		JBrowse link
G Phldb2 pleckstrin homology like domain family B member 2 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chrNW_004624731:36,596,812...36,871,963
Ensembl chrNW_004624731:36,593,871...36,872,200 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:27919618) BHF-UCL PMID:27919618 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
NLRP3 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atat1 alpha tubulin acetyltransferase 1 acts_upstream_of ISO (PMID:23502856) MGI PMID:23502856 NCBI chrNW_004624754:25,058,312...25,069,052
Ensembl chrNW_004624754:25,058,204...25,069,561 		JBrowse link
G Gkn2 gastrokine 2 acts_upstream_of_or_within ISO (PMID:32226647) MGI PMID:32226647 NCBI chrNW_004624762:4,420,481...4,432,701
Ensembl chrNW_004624762:4,420,481...4,432,674 		JBrowse link
G Kcnj8 potassium inwardly rectifying channel subfamily J member 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:16,939,289...16,945,692
Ensembl chrNW_004624752:16,939,384...16,946,723 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 acts_upstream_of_or_within
involved_in		 ISO (PMID:22753929)
(PMID:17483456), (PMID:23582325), (PMID:25686105), (PMID:27043286), (PMID:27432880), (PMID:28465465), (PMID:28656979), (PMID:28943315), (PMID:30487600), (PMID:31189953), (PMID:33231615), (PMID:34554188), (PMID:34615873), (PMID:35114687), (PMID:35254907), (PMID:35559676), (PMID:36442502), (PMID:39173637)
(PMID:23582325), (PMID:26173909), (PMID:27043286), (PMID:28465465), (PMID:28656979), (PMID:28716882), (PMID:28943315), (PMID:30487600), (PMID:34615873), (PMID:34861190)		 MGI
UniProt		 PMID:17483456 PMID:22753929 PMID:23582325 PMID:25686105 PMID:26173909 More... NCBI chrNW_004624937:564,191...584,470 JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:27432880) UniProt PMID:27432880 NCBI chrNW_004624782:14,247,333...14,249,861
Ensembl chrNW_004624782:14,247,864...14,249,000 		JBrowse link
G Sirt2 sirtuin 2 acts_upstream_of ISO (PMID:23502856) MGI PMID:23502856 NCBI chrNW_004624794:12,239,363...12,259,561
Ensembl chrNW_004624794:12,235,263...12,259,276 		JBrowse link
NLRP6 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlrp6 NLR family pyrin domain containing 6 involved_in ISO (PMID:30674671), (PMID:31932628), (PMID:34678144)
(PMID:32424362), (PMID:34678144)		 UniProt PMID:30674671 PMID:31932628 PMID:32424362 PMID:34678144 NCBI chrNW_004624766:22,143,405...22,150,903 JBrowse link
nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf34 ring finger protein 34 involved_in ISO (PMID:25012219) UniProt PMID:25012219 NCBI chrNW_004624747:21,904,652...21,920,579
Ensembl chrNW_004624747:21,904,667...21,920,778 		JBrowse link
nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfkbia NFKB inhibitor alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624838:1,384,337...1,387,602
Ensembl chrNW_004624838:1,384,204...1,390,205 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in ISO (PMID:27007849)
(PMID:11058605), (PMID:12791997), (PMID:12796777)		 UniProt PMID:11058605 PMID:12791997 PMID:12796777 PMID:27007849 NCBI chrNW_004624739:285,791...339,752
Ensembl chrNW_004624739:285,689...341,956 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:29452636), (PMID:30279485)
(PMID:11894098)		 UniProt
MGI		 PMID:11894098 PMID:29452636 PMID:30279485 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
nucleotide-binding oligomerization domain containing 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inava innate immunity activator involved_in ISO (PMID:28436939) UniProt PMID:28436939 NCBI chrNW_004624807:9,718,307...9,738,282
Ensembl chrNW_004624807:9,718,307...9,738,148 		JBrowse link
G Irf5 interferon regulatory factor 5 involved_in ISO (PMID:22412986) BHF-UCL PMID:22412986 NCBI chrNW_004624783:7,267,680...7,275,918
Ensembl chrNW_004624783:7,260,005...7,274,433 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Lacc1 laccase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624748:11,150,678...11,194,794
Ensembl chrNW_004624748:11,187,316...11,194,841 		JBrowse link
G Nfkbia NFKB inhibitor alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624838:1,384,337...1,387,602
Ensembl chrNW_004624838:1,384,204...1,390,205 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:12527755)
(PMID:23892723)
(PMID:15692052)
(PMID:27007849)
(PMID:12626759), (PMID:15044951), (PMID:17355968), (PMID:23806334), (PMID:31649195)		 MGI
UniProt		 PMID:12527755 PMID:12626759 PMID:15044951 PMID:15692052 PMID:17355968 More... NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Otulin OTU deubiquitinase with linear linkage specificity involved_in ISO (PMID:23806334) UniProt PMID:23806334 NCBI chrNW_004624751:11,676,932...11,703,143
Ensembl chrNW_004624751:11,676,850...11,702,061 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,732,813...20,742,016
Ensembl chrNW_004624767:20,732,938...20,741,272 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:16824733), (PMID:17355968), (PMID:17562858), (PMID:23806334), (PMID:28545134), (PMID:29452636), (PMID:30026309), (PMID:30279485), (PMID:30478312)
(PMID:17947236)
(PMID:11894098)		 UniProt
MGI		 PMID:11894098 PMID:16824733 PMID:17355968 PMID:17562858 PMID:17947236 More... NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:23258413) UniProt PMID:23258413 NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Clec4e C-type lectin domain family 4 member E involved_in ISO (PMID:24101491) UniProt PMID:24101491 NCBI chrNW_004624860:4,108,782...4,113,693
Ensembl chrNW_004624860:4,108,640...4,113,839 		JBrowse link
G Inava innate immunity activator involved_in ISO (PMID:28436939) UniProt PMID:28436939 NCBI chrNW_004624807:9,718,307...9,738,282
Ensembl chrNW_004624807:9,718,307...9,738,148 		JBrowse link
G Lacc1 laccase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624748:11,150,678...11,194,794
Ensembl chrNW_004624748:11,187,316...11,194,841 		JBrowse link
G LOC101703392 twinfilin-2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624730:6,004,706...6,020,876 JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in ISO (PMID:31649195) UniProt PMID:31649195 NCBI chrNW_004624739:285,791...339,752
Ensembl chrNW_004624739:285,689...341,956 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:31649195) UniProt PMID:31649195 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Rnf144a ring finger protein 144A involved_in ISO (PMID:37955227) UniProt PMID:37955227 NCBI chrNW_004624846:3,297,444...3,393,473
Ensembl chrNW_004624846:3,300,960...3,378,372 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (PMID:23910378) UniProt PMID:23910378 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
G Tlr7 toll like receptor 7 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Tlr8 toll like receptor 8 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624882:1,240,519...1,247,311
Ensembl chrNW_004624882:1,240,626...1,312,468 		JBrowse link
phosphatidylserine exposure on blood platelet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 involved_in ISO (PMID:21107324) UniProt PMID:21107324 NCBI chrNW_004624816:6,896,176...7,077,758
Ensembl chrNW_004624816:6,894,413...7,077,883 		JBrowse link
positive regulation of acute inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (PMID:21268008) BHF-UCL PMID:21268008 NCBI chrNW_004624737:13,459,274...13,474,686 JBrowse link
G Alox5ap arachidonate 5-lipoxygenase activating protein ISO RGD PMID:20519143 RGD:5147468 NCBI chrNW_004624776:7,475,269...7,646,805
Ensembl chrNW_004624776:7,475,200...7,506,283 		JBrowse link
G Bpifa1 BPI fold containing family A member 1 ISO RGD PMID:20949060 RGD:11554178 (All species) (All species) NCBI chrNW_004624842:6,024,460...6,031,718 JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:2444978) BHF-UCL PMID:2444978 NCBI chrNW_004624739:7,957,709...7,963,414
Ensembl chrNW_004624739:7,957,674...7,962,318 		JBrowse link
G Klk1 kallikrein 1 ISO RGD PMID:17015177 RGD:1641800 NCBI chrNW_004624832:3,869,255...3,873,350
Ensembl chrNW_004624832:3,868,465...3,873,290 		JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:16455830 RGD:1641985 NCBI chrNW_004624747:10,307,826...10,308,649
Ensembl chrNW_004624747:10,303,919...10,308,821 		JBrowse link
G Npy5r neuropeptide Y receptor Y5 ISO RGD PMID:12161018 RGD:1625503 NCBI chrNW_004624758:13,518,722...13,521,292
Ensembl chrNW_004624758:13,518,951...13,524,840 		JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma ISO RGD PMID:17526805 RGD:1642429 NCBI chrNW_004624739:22,737,376...22,772,696
Ensembl chrNW_004624739:22,737,270...22,772,589 		JBrowse link
G Tac1 tachykinin precursor 1 ISO RGD PMID:19222484 RGD:2304254 NCBI chrNW_004624813:4,542,226...4,550,378
Ensembl chrNW_004624813:4,542,011...4,550,486 		JBrowse link
positive regulation of acute inflammatory response to antigenic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnr1 cannabinoid receptor 1 ISO RGD PMID:19282305 RGD:2314677 NCBI chrNW_004624799:6,100,709...6,126,530
Ensembl chrNW_004624799:6,101,728...6,126,520 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:26021615) UniProt PMID:26021615 NCBI chrNW_004624818:3,900,917...3,915,457
Ensembl chrNW_004624818:3,900,917...3,911,042 		JBrowse link
positive regulation of acute inflammatory response to non-antigenic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ffar2 free fatty acid receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624794:8,140,629...8,155,313
Ensembl chrNW_004624794:8,140,629...8,155,258 		JBrowse link
G Ffar3 free fatty acid receptor 3 involved_in ISO (PMID:23665276) UniProt PMID:23665276 NCBI chrNW_004624794:8,200,101...8,202,145 JBrowse link
positive regulation of AIM2 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbp5 guanylate binding protein 5 involved_in ISO (PMID:25774715), (PMID:25774716) UniProt PMID:25774715 PMID:25774716 NCBI chrNW_004624742:8,324,902...8,335,965 JBrowse link
positive regulation of antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:18167348) MGI PMID:18167348 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
positive regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klk5 kallikrein related peptidase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:3,795,405...3,804,192
Ensembl chrNW_004624832:3,796,532...3,803,973 		JBrowse link
G Klk7 kallikrein related peptidase 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:3,774,837...3,778,646
Ensembl chrNW_004624832:3,775,252...3,778,432 		JBrowse link
G Pgc progastricsin involved_in ISO (PMID:12759353) UniProt PMID:12759353 NCBI chrNW_004624754:17,311,743...17,319,675
Ensembl chrNW_004624754:17,311,644...17,319,764 		JBrowse link
positive regulation of antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g5 phospholipase A2 group V involved_in ISO (PMID:19342668) UniProt PMID:19342668 NCBI chrNW_004624764:5,196,215...5,207,138
Ensembl chrNW_004624764:5,196,215...5,207,232 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:30911105) ARUK-UCL PMID:30911105 NCBI chrNW_004624767:1,376,649...1,404,382
Ensembl chrNW_004624767:1,394,704...1,404,406 		JBrowse link
G Trim62 tripartite motif containing 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:16,200,539...16,230,713
Ensembl chrNW_004624764:16,200,539...16,230,780 		JBrowse link
positive regulation of antimicrobial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23610393) UniProt PMID:23610393 NCBI chrNW_004624751:23,478,263...23,488,834
Ensembl chrNW_004624751:23,478,096...23,483,521 		JBrowse link
G Camp cathelicidin antimicrobial peptide ISO RGD PMID:18227173 RGD:438738460 NCBI chrNW_004624730:73,429,893...73,431,104 JBrowse link
positive regulation of antimicrobial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il17a interleukin 17A involved_in ISO (PMID:19144317) UniProt PMID:19144317 NCBI chrNW_004624855:3,911,349...3,914,214
Ensembl chrNW_004624855:3,911,349...3,913,136 		JBrowse link
G Il17f interleukin 17F involved_in ISO (PMID:19144317) UniProt PMID:19144317 NCBI chrNW_004624855:3,865,559...3,867,175
Ensembl chrNW_004624855:3,848,409...3,867,175 		JBrowse link
positive regulation of astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf1r colony stimulating factor 1 receptor ISO RGD PMID:33841088 RGD:151665762 NCBI chrNW_004624774:9,363,156...9,391,939
Ensembl chrNW_004624774:9,363,908...9,391,986 		JBrowse link
positive regulation of ATF6-mediated unfolded protein response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf6 activating transcription factor 6 involved_in ISO (PMID:9837962) UniProt PMID:9837962 NCBI chrNW_004624826:189,899...412,540
Ensembl chrNW_004624826:190,131...412,197 		JBrowse link
positive regulation of axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp1 LDL receptor related protein 1 ISO RGD PMID:23867460 RGD:13800520 NCBI chrNW_004624802:10,734,907...10,812,888
Ensembl chrNW_004624802:10,734,263...10,812,763 		JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:16142215) MGI PMID:16142215 NCBI chrNW_004624768:15,239,111...15,619,979
Ensembl chrNW_004624768:15,252,354...15,619,601 		JBrowse link
positive regulation of axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor ISO RGD PMID:24873730 RGD:405878058 NCBI chrNW_004624766:17,281,882...17,330,601
Ensembl chrNW_004624766:17,279,630...17,330,490 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:24733831) MGI PMID:24733831 NCBI chrNW_004624765:20,766,368...20,951,560
Ensembl chrNW_004624765:20,773,885...20,951,736 		JBrowse link
G Cntf ciliary neurotrophic factor involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:15574731 GO_REF:0000118 RGD:1626128 NCBI chrNW_004624864:1,785,215...1,788,608
Ensembl chrNW_004624864:1,782,139...1,792,879 		JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B ISO RGD PMID:9512405 RGD:7205517 NCBI chrNW_004624738:6,383,003...6,394,051
Ensembl chrNW_004624738:6,382,983...6,394,051 		JBrowse link
G Flna filamin A involved_in ISO (PMID:26157139) CACAO PMID:26157139 NCBI chrNW_004624946:812,278...836,307
Ensembl chrNW_004624946:812,287...837,273 		JBrowse link
G Grn granulin precursor involved_in ISO (PMID:28453791) UniProt PMID:28453791 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165 		JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:23349896 RGD:10046026 NCBI chrNW_004624768:5,396,027...5,688,435
Ensembl chrNW_004624768:5,396,156...5,681,809 		JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:12456989 RGD:1642004 NCBI chrNW_004624747:10,307,826...10,308,649
Ensembl chrNW_004624747:10,303,919...10,308,821 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 ISO RGD PMID:18431495 RGD:2306515 NCBI chrNW_004624786:10,981,963...11,039,504
Ensembl chrNW_004624786:11,000,615...11,034,689 		JBrowse link
G Nrg1 neuregulin 1 ISO RGD PMID:20957456 RGD:10449012 NCBI chrNW_004624780:11,297,306...11,525,236
Ensembl chrNW_004624780:11,301,182...12,424,066 		JBrowse link
G Ptn pleiotrophin involved_in ISO PMID:27671118 UniProt PMID:27671118 RGD:14397577 NCBI chrNW_004624765:17,523,086...17,625,264
Ensembl chrNW_004624765:17,522,916...17,548,184 		JBrowse link
G Scarf1 scavenger receptor class F member 1 involved_in ISO (PMID:18160648) UniProt PMID:18160648 NCBI chrNW_004624786:4,336,084...4,353,131
Ensembl chrNW_004624786:4,338,711...4,352,901 		JBrowse link
G Stk24 serine/threonine kinase 24 ISO RGD PMID:19855390 RGD:2317003 NCBI chrNW_004624793:12,474,346...12,595,052
Ensembl chrNW_004624793:12,474,373...12,595,062 		JBrowse link
positive regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam168a family with sequence similarity 168 member A involved_in ISO (PMID:25260657) UniProt PMID:25260657 NCBI chrNW_004624817:3,367,402...3,553,275
Ensembl chrNW_004624817:3,474,230...3,550,714 		JBrowse link
G Rps3 ribosomal protein S3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:1,710,768...1,715,923
Ensembl chrNW_004624817:1,710,768...1,716,224 		JBrowse link
positive regulation of behavioral fear response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cck cholecystokinin ISO RGD PMID:12373548 RGD:1358453 NCBI chrNW_004624730:77,310,080...77,314,258
Ensembl chrNW_004624730:77,309,633...77,314,384 		JBrowse link
G Cckbr cholecystokinin B receptor ISO RGD PMID:12373548 RGD:1358453 NCBI chrNW_004624817:7,744,422...7,754,870
Ensembl chrNW_004624817:7,743,865...7,755,453 		JBrowse link
G Crh corticotropin releasing hormone ISO RGD PMID:10366634 RGD:5508167 NCBI chrNW_004624744:25,194,458...25,196,658
Ensembl chrNW_004624744:25,194,495...25,196,488 		JBrowse link
G Gja1 gap junction protein alpha 1 ISO RGD PMID:22665389 RGD:7207267 NCBI chrNW_004624798:9,358,996...9,364,413
Ensembl chrNW_004624798:9,359,004...9,364,313 		JBrowse link
G Grp gastrin releasing peptide involved_in ISO (PMID:34610277) UniProt PMID:34610277 NCBI chrNW_004624792:4,623,082...4,633,545
Ensembl chrNW_004624792:4,623,097...4,633,570 		JBrowse link
G Grpr gastrin releasing peptide receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624829:907,386...946,385
Ensembl chrNW_004624829:907,371...939,779 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:18579729) UniProt PMID:18579729 NCBI chrNW_004624743:8,072,871...8,235,174
Ensembl chrNW_004624743:8,072,673...8,235,252 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:29163035) UniProt PMID:29163035 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779 		JBrowse link
G Penk proenkephalin ISO RGD PMID:23368426 RGD:10040949 NCBI chrNW_004624886:3,595,485...3,613,117
Ensembl chrNW_004624886:3,595,450...3,613,593 		JBrowse link
G Ucn urocortin ISO RGD PMID:10366634 RGD:5508167 NCBI chrNW_004624738:9,393,004...9,393,966
Ensembl chrNW_004624738:9,393,329...9,393,706 		JBrowse link
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:15692051) MGI PMID:15692051 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
positive regulation of blood coagulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule (CD36 blood group) involved_in ISO (PMID:20978343) BHF-UCL PMID:20978343 NCBI chrNW_004624739:29,341,620...29,441,232
Ensembl chrNW_004624739:29,407,568...29,441,333 		JBrowse link
G Emilin2 elastin microfibril interfacer 2 involved_in ISO (PMID:25658937) ComplexPortal PMID:25658937 NCBI chrNW_004624770:13,133,319...13,156,420 JBrowse link
G Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 involved_in ISO (PMID:22995898) UniProt PMID:22995898 NCBI chrNW_004624754:14,302,709...14,316,914
Ensembl chrNW_004624754:14,305,062...14,312,018 		JBrowse link
G F12 coagulation factor XII involved_in ISO (PMID:6793628) BHF-UCL PMID:6793628 NCBI chrNW_004624733:12,666,410...12,683,273
Ensembl chrNW_004624733:12,675,966...12,683,117 		JBrowse link
G F2 coagulation factor II, thrombin involved_in IEA
ISO		 TreeGrafter
RGD		 PMID:20664909 GO_REF:0000118 RGD:10449431 NCBI chrNW_004624767:1,876,974...1,887,720
Ensembl chrNW_004624767:1,877,024...1,887,958 		JBrowse link
G F2r coagulation factor II thrombin receptor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18305483) MGI
TreeGrafter		 PMID:18305483 GO_REF:0000118 NCBI chrNW_004624869:1,181,288...1,200,751
Ensembl chrNW_004624869:1,181,354...1,200,664 		JBrowse link
G F7 coagulation factor VII ISO RGD PMID:12757778 RGD:2312295 NCBI chrNW_004624793:780,057...788,105
Ensembl chrNW_004624793:780,059...788,095 		JBrowse link
G Hpse heparanase involved_in ISO (PMID:20634491) UniProt PMID:20634491 NCBI chrNW_004624900:296,626...335,624
Ensembl chrNW_004624900:296,676...335,570 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (PMID:20978343) BHF-UCL PMID:20978343 NCBI chrNW_004624787:14,355,330...14,381,353
Ensembl chrNW_004624787:14,355,791...14,381,251 		JBrowse link
G Prdx2 peroxiredoxin 2 involved_in ISO (PMID:20978343) BHF-UCL PMID:20978343 NCBI chrNW_004624901:407,240...410,902
Ensembl chrNW_004624901:406,257...410,866 		JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in ISO (PMID:24691441) CACAO PMID:24691441 NCBI chrNW_004624885:767,455...770,023
Ensembl chrNW_004624885:762,934...770,129 		JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO (PMID:9207454) BHF-UCL PMID:9207454 NCBI chrNW_004624740:16,128,145...16,136,696
Ensembl chrNW_004624740:16,128,059...16,137,337 		JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in ISO (PMID:12097641) UniProt PMID:12097641 NCBI chrNW_004624812:503,703...551,907
Ensembl chrNW_004624812:509,841...553,894 		JBrowse link
G Tbxa2r thromboxane A2 receptor ISO RGD PMID:7848332 RGD:11059887 NCBI chrNW_004624828:6,291,010...6,312,438
Ensembl chrNW_004624828:6,291,167...6,309,482 		JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:3997886) BHF-UCL PMID:3997886 NCBI chrNW_004624804:6,849,660...6,866,164
Ensembl chrNW_004624804:6,849,670...6,867,684 		JBrowse link
positive regulation of cardiac muscle hypertrophy in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp3ca protein phosphatase 3 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624830:6,318,352...6,584,232
Ensembl chrNW_004624830:6,317,968...6,581,892 		JBrowse link
G Trpc3 transient receptor potential cation channel subfamily C member 3 involved_in ISO (PMID:19287093) BHF-UCL PMID:19287093 NCBI chrNW_004624777:2,154,887...2,232,476
Ensembl chrNW_004624777:2,153,265...2,232,449 		JBrowse link
positive regulation of cellular defense response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il33 interleukin 33 acts_upstream_of_or_within ISO (PMID:26936882) ARUK-UCL PMID:26936882 NCBI chrNW_004624736:10,733,944...10,786,188
Ensembl chrNW_004624736:10,764,486...10,784,864 		JBrowse link
positive regulation of cellular response to heat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ier5 immediate early response 5 involved_in ISO (PMID:26496226) UniProt PMID:26496226 NCBI chrNW_004624771:1,318,097...1,320,394
Ensembl chrNW_004624771:1,318,498...1,319,418 		JBrowse link
positive regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3a DNA methyltransferase 3 alpha ISO oxygen-glucose deprivation-induced cell death RGD PMID:23516428 RGD:9589049 NCBI chrNW_004624738:7,481,084...7,581,332
Ensembl chrNW_004624738:7,485,842...7,581,056 		JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 ISO RGD PMID:24705172 RGD:9831164 NCBI chrNW_004624771:20,040,685...20,166,992
Ensembl chrNW_004624771:19,984,857...20,164,021 		JBrowse link
positive regulation of cellular response to oxidative stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fads2 fatty acid desaturase 2 ISO RGD PMID:24284026 RGD:401901245 NCBI chrNW_004624926:529,456...548,800
Ensembl chrNW_004624926:528,791...548,854 		JBrowse link
G Hdac6 histone deacetylase 6 ISO RGD PMID:19884510 RGD:9681717 NCBI chrNW_004624893:608,744...627,600
Ensembl chrNW_004624893:608,540...628,580 		JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 ISO hydrogen peroxide-induced neuron death RGD PMID:16651700 RGD:9999433 NCBI chrNW_004624745:29,757,267...29,809,607
Ensembl chrNW_004624745:29,757,106...29,806,795 		JBrowse link
positive regulation of cGAS/STING signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624902:1,173,101...1,216,662
Ensembl chrNW_004624902:1,182,682...1,216,171 		JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 involved_in ISO (PMID:37832545) UniProt PMID:37832545 NCBI chrNW_004624799:3,554,644...3,623,317
Ensembl chrNW_004624799:3,554,678...3,622,289 		JBrowse link
G Marchf5 membrane associated ring-CH-type finger 5 involved_in ISO (PMID:37916870) UniProt PMID:37916870 NCBI chrNW_004624737:3,570,415...3,614,380
Ensembl chrNW_004624737:3,570,255...3,615,057 		JBrowse link
G Rnf39 ring finger protein 39 involved_in ISO (PMID:39255680) UniProt PMID:39255680 NCBI chrNW_004624754:25,331,126...25,348,957
Ensembl chrNW_004624754:25,331,070...25,335,153 		JBrowse link
G Slc19a1 solute carrier family 19 member 1 involved_in ISO (PMID:36745868) UniProt PMID:36745868 NCBI chrNW_004624745:30,793,114...30,811,944
Ensembl chrNW_004624745:30,794,024...30,811,944 		JBrowse link
G Tab1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 involved_in ISO (PMID:37832545) UniProt PMID:37832545 NCBI chrNW_004624752:8,912,467...8,937,313
Ensembl chrNW_004624752:8,913,900...8,937,329 		JBrowse link
G Zdhhc9 zDHHC palmitoyltransferase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624797:9,027,316...9,060,321
Ensembl chrNW_004624797:9,023,833...9,060,855 		JBrowse link
positive regulation of chronic inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ido1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624780:3,684,941...3,697,506
Ensembl chrNW_004624780:3,685,069...3,697,474 		JBrowse link
G Pde5a phosphodiesterase 5A ISO RGD PMID:19129291 RGD:2314463 NCBI chrNW_004624964:11,085...126,027
Ensembl chrNW_004624964:14,216...126,553 		JBrowse link
positive regulation of chronic inflammatory response to antigenic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lta lymphotoxin alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:24,626,930...24,628,412
Ensembl chrNW_004624754:24,627,318...24,628,182 		JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (PMID:9834074) MGI PMID:9834074 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531 		JBrowse link
positive regulation of chronic inflammatory response to non-antigenic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2b adenosine A2b receptor acts_upstream_of_or_within ISO (PMID:16841096) MGI PMID:16841096 NCBI chrNW_004624877:4,421,307...4,447,574
Ensembl chrNW_004624877:4,422,022...4,447,460 		JBrowse link
positive regulation of collateral sprouting of injured axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp1 LDL receptor related protein 1 ISO RGD PMID:23867460 RGD:13800520 NCBI chrNW_004624802:10,734,907...10,812,888
Ensembl chrNW_004624802:10,734,263...10,812,763 		JBrowse link
positive regulation of defense response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irak2 interleukin 1 receptor associated kinase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624731:5,294,464...5,348,426
Ensembl chrNW_004624731:5,294,431...5,348,481 		JBrowse link
G Irak4 interleukin 1 receptor associated kinase 4 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624816:8,783,075...8,808,734
Ensembl chrNW_004624816:8,778,299...8,802,883 		JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624756:21,806,570...21,837,351
Ensembl chrNW_004624756:21,805,599...21,830,699 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890 		JBrowse link
positive regulation of defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (PMID:17988845) ComplexPortal PMID:17988845 NCBI chrNW_004624738:9,180,944...9,189,025
Ensembl chrNW_004624738:9,180,877...9,189,025 		JBrowse link
G Emilin2 elastin microfibril interfacer 2 involved_in ISO (PMID:17988845) ComplexPortal PMID:17988845 NCBI chrNW_004624770:13,133,319...13,156,420 JBrowse link
G Grn granulin precursor involved_in ISO (PMID:20026663) UniProt PMID:20026663 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:20937702) UniProt PMID:20937702 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:20937702) UniProt PMID:20937702 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G LOC101717043 cytochrome b-245 light chain involved_in ISO (PMID:22423966) UniProt PMID:22423966 NCBI chrNW_004624746:911,852...919,361
Ensembl chrNW_004624746:911,842...919,362 		JBrowse link
G Mmrn2 multimerin 2 involved_in ISO (PMID:17988845) ComplexPortal PMID:17988845 NCBI chrNW_004624841:196,708...212,499
Ensembl chrNW_004624841:197,547...210,132 		JBrowse link
G Nlrp10 NLR family pyrin domain containing 10 involved_in ISO (PMID:28766990) UniProt PMID:28766990 NCBI chrNW_004624766:172,727...177,029 JBrowse link
G Rab34 RAB34, member RAS oncogene family involved_in ISO (PMID:23197834) ParkinsonsUK-UCL PMID:23197834 NCBI chrNW_004624786:1,286,886...1,291,582
Ensembl chrNW_004624786:1,286,887...1,291,419 		JBrowse link
G Unc13b unc-13 homolog B involved_in ISO (PMID:23197834) ParkinsonsUK-UCL PMID:23197834 NCBI chrNW_004624915:327,633...530,522
Ensembl chrNW_004624915:327,401...531,886 		JBrowse link
positive regulation of defense response to virus by host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Creb3 cAMP responsive element binding protein 3 involved_in ISO (PMID:20091349) UniProt PMID:20091349 NCBI chrNW_004624868:5,056,415...5,061,234
Ensembl chrNW_004624868:5,056,691...5,060,669 		JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624912:871,024...880,299
Ensembl chrNW_004624912:871,584...880,626 		JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (PMID:16601681) UniProt PMID:16601681 NCBI chrNW_004624804:7,262,195...7,371,506
Ensembl chrNW_004624804:7,262,163...7,376,267 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:22483866) UniProt PMID:22483866 NCBI chrNW_004624928:458,651...532,201
Ensembl chrNW_004624928:463,279...530,115 		JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO (PMID:20628368) UniProt PMID:20628368 NCBI chrNW_004624734:2,233,932...2,239,687
Ensembl chrNW_004624734:2,233,547...2,241,436 		JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:12421946)
(PMID:14688363)		 BHF-UCL PMID:12421946 PMID:14688363 NCBI chrNW_004624733:30,146,050...30,156,144
Ensembl chrNW_004624733:30,146,050...30,154,589 		JBrowse link
G Il12rb1 interleukin 12 receptor subunit beta 1 involved_in ISO (PMID:12421946) BHF-UCL PMID:12421946 NCBI chrNW_004624908:1,472,059...1,481,423 JBrowse link
G Il23a interleukin 23 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:11,662,851...11,664,444
Ensembl chrNW_004624802:11,662,753...11,665,418 		JBrowse link
G Il23r interleukin 23 receptor involved_in ISO (PMID:12421946) BHF-UCL PMID:12421946 NCBI chrNW_004624742:27,899,934...27,954,145
Ensembl chrNW_004624742:27,901,071...27,941,109 		JBrowse link
G Il27 interleukin 27 acts_upstream_of_or_within ISO (PMID:25268627) MGI PMID:25268627 NCBI chrNW_004624782:13,009,450...13,015,548
Ensembl chrNW_004624782:13,009,564...13,015,440 		JBrowse link
G Il4 interleukin 4 ISO RGD PMID:9721086 RGD:8142392 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in
acts_upstream_of_or_within		 ISO (PMID:19609254)
(PMID:18780793)
(PMID:16127453), (PMID:20628368)		 UniProt
MGI		 PMID:16127453 PMID:18780793 PMID:19609254 PMID:20628368 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Parp9 poly(ADP-ribose) polymerase family member 9 involved_in ISO (PMID:26479788) UniProt PMID:26479788 NCBI chrNW_004624912:827,112...968,501
Ensembl chrNW_004624912:827,547...859,199 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:16873256), (PMID:16873257) UniProt PMID:16873256 PMID:16873257 NCBI chrNW_004624781:464,858...498,146
Ensembl chrNW_004624781:464,658...497,775 		JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624893:680,929...684,251
Ensembl chrNW_004624893:681,167...684,251 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990 		JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:19158675) UniProt PMID:19158675 NCBI chrNW_004624782:14,247,333...14,249,861
Ensembl chrNW_004624782:14,247,864...14,249,000 		JBrowse link
G Rigi RNA sensor RIG-I involved_in ISO (PMID:19609254) UniProt PMID:19609254 NCBI chrNW_004624736:37,134,718...37,204,543
Ensembl chrNW_004624736:37,133,059...37,197,218 		JBrowse link
G Selenok selenoprotein K involved_in ISO (PMID:21220695) UniProt PMID:21220695 NCBI chrNW_004624822:3,309,170...3,314,882 JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (PMID:22783022) BHF-UCL PMID:22783022 NCBI chrNW_004624894:300,027...388,397
Ensembl chrNW_004624894:301,082...362,683 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (PMID:26479788) UniProt PMID:26479788 NCBI chrNW_004624854:5,067,578...5,106,052
Ensembl chrNW_004624854:5,067,535...5,102,106 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (PMID:18818105) BHF-UCL PMID:18818105 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
G Tomm70 translocase of outer mitochondrial membrane 70 involved_in ISO (PMID:20628368) UniProt PMID:20628368 NCBI chrNW_004624789:13,792,434...13,828,403
Ensembl chrNW_004624789:13,792,049...13,829,104 		JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624933:507,879...558,357
Ensembl chrNW_004624933:506,254...554,015 		JBrowse link
G Treml4 triggering receptor expressed on myeloid cells like 4 involved_in ISO (PMID:25848864) UniProt PMID:25848864 NCBI chrNW_004624754:17,600,341...17,608,766 JBrowse link
G Trim44 tripartite motif containing 44 involved_in ISO (PMID:23460740) BHF-UCL PMID:23460740 NCBI chrNW_004624767:11,373,992...11,550,622
Ensembl chrNW_004624767:11,378,172...11,550,337 		JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:24882218) UniProt PMID:24882218 NCBI chrNW_004624817:7,029,104...7,053,447
Ensembl chrNW_004624817:7,045,228...7,053,525 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:20,224,919...20,234,108
Ensembl chrNW_004624764:20,224,906...20,234,629 		JBrowse link
G Zdhhc1 zDHHC palmitoyltransferase 1 involved_in ISO (PMID:25299331) UniProt PMID:25299331 NCBI chrNW_004624746:18,901,622...18,921,798
Ensembl chrNW_004624746:18,901,589...18,922,066 		JBrowse link
positive regulation of DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23352644) UniProt PMID:23352644 NCBI chrNW_004624758:18,106,621...18,120,910
Ensembl chrNW_004624758:18,106,606...18,120,907 		JBrowse link
G Tti1 TELO2 interacting protein 1 involved_in ISO (PMID:36724785) UniProt PMID:36724785 NCBI chrNW_004624842:1,629,867...1,701,995 JBrowse link
positive regulation of DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd1 ankyrin repeat domain 1 involved_in ISO (PMID:20599664) BHF-UCL PMID:20599664 NCBI chrNW_004624737:2,127,253...2,136,181
Ensembl chrNW_004624737:2,127,267...2,136,347 		JBrowse link
G Atm ATM serine/threonine kinase involved_in ISO (PMID:9733515) BHF-UCL PMID:9733515 NCBI chrNW_004624784:2,933,172...3,080,131
Ensembl chrNW_004624784:2,937,499...3,078,216 		JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:9925639)
(PMID:9733515)		 BHF-UCL PMID:9733515 PMID:9925639 NCBI chrNW_004624730:19,022,012...19,145,474
Ensembl chrNW_004624730:19,022,070...19,145,306 		JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624870:206,714...214,264
Ensembl chrNW_004624870:204,671...214,156 		JBrowse link
G Eef1e1 eukaryotic translation elongation factor 1 epsilon 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15680327) InterPro
MGI		 PMID:15680327 GO_REF:0000002 NCBI chrNW_004624756:17,561,484...17,580,225
Ensembl chrNW_004624756:17,561,510...17,583,105 		JBrowse link
G Hic1 HIC ZBTB transcriptional repressor 1 involved_in ISO (PMID:16269335) UniProt PMID:16269335 NCBI chrNW_004624786:4,724,806...4,729,714 JBrowse link
G Ing4 inhibitor of growth family member 4 involved_in ISO (PMID:15251430) UniProt PMID:15251430 NCBI chrNW_004624860:3,353,443...3,362,541
Ensembl chrNW_004624860:3,353,489...3,362,430 		JBrowse link
G Pla2r1 phospholipase A2 receptor 1 involved_in ISO (PMID:19197340) UniProt PMID:19197340 NCBI chrNW_004624732:5,525,740...5,681,772
Ensembl chrNW_004624732:5,525,863...5,677,811 		JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:15102863)
(PMID:14500851)		 UniProt PMID:14500851 PMID:15102863 NCBI chrNW_004624792:5,330,289...5,338,067 JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004624786:10,948,624...10,953,381
Ensembl chrNW_004624786:10,946,302...10,953,564 		JBrowse link
G Spred1 sprouty related EVH1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624804:5,504,128...5,588,196
Ensembl chrNW_004624804:5,503,469...5,588,375 		JBrowse link
G Spred2 sprouty related EVH1 domain containing 2 involved_in ISO (PMID:20736167) BHF-UCL PMID:20736167 NCBI chrNW_004624762:8,109,159...8,240,543
Ensembl chrNW_004624762:8,109,157...8,240,543 		JBrowse link
G Znf385a zinc finger protein 385A involved_in ISO (PMID:17719541) UniProt PMID:17719541 NCBI chrNW_004624904:2,392,425...2,414,806
Ensembl chrNW_004624904:2,392,342...2,414,792 		JBrowse link
G Znhit1 zinc finger HIT-type containing 1 involved_in ISO (PMID:17700068) UniProt PMID:17700068 NCBI chrNW_004624740:16,066,354...16,073,810
Ensembl chrNW_004624740:16,066,354...16,073,643 		JBrowse link
positive regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in ISO (PMID:17525340), (PMID:19261748) UniProt PMID:17525340 PMID:19261748 NCBI chrNW_004624900:431,969...447,535
Ensembl chrNW_004624900:434,576...447,518 		JBrowse link
G Actl6a actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:57,305,105...57,337,653
Ensembl chrNW_004624730:57,305,053...57,337,797 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624842:910,178...933,495
Ensembl chrNW_004624842:912,336...933,573 		JBrowse link
G Actr8 actin related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624822:3,319,694...3,335,359
Ensembl chrNW_004624822:3,319,439...3,335,360 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in ISO (PMID:17121854) UniProt PMID:17121854 NCBI chrNW_004624817:7,913,541...7,937,945
Ensembl chrNW_004624817:7,909,468...7,936,487 		JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624908:654,886...660,589
Ensembl chrNW_004624908:654,759...661,190 		JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624738:9,910,963...10,322,917
Ensembl chrNW_004624738:9,914,314...10,323,610 		JBrowse link
G Brca1 BRCA1 DNA repair associated involved_in ISO (PMID:17525340), (PMID:19261748) UniProt PMID:17525340 PMID:19261748 NCBI chrNW_004624795:1,186,043...1,238,986
Ensembl chrNW_004624795:1,188,136...1,241,964 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624963:142,987...212,190
Ensembl chrNW_004624963:145,580...212,064 		JBrowse link
G Cbx8 chromobox 8 ISO RGD PMID:23572236 RGD:9586727 NCBI chrNW_004624801:8,966,366...8,969,458
Ensembl chrNW_004624801:8,967,013...8,969,697 		JBrowse link
G Ccdc117 coiled-coil domain containing 117 involved_in ISO (PMID:30742009) UniProt PMID:30742009 NCBI chrNW_004624747:5,103,502...5,119,726
Ensembl chrNW_004624747:5,103,407...5,120,336 		JBrowse link
G Cebpg CCAAT enhancer binding protein gamma involved_in ISO (PMID:16255782) UniProt PMID:16255782 NCBI chrNW_004624794:9,727,616...9,736,729
Ensembl chrNW_004624794:9,729,876...9,736,516 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:24049074) UniProt PMID:24049074 NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:17115032) UniProt PMID:17115032 NCBI chrNW_004624740:584,133...713,205
Ensembl chrNW_004624740:589,606...713,271 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:22483866) UniProt PMID:22483866 NCBI chrNW_004624928:458,651...532,201
Ensembl chrNW_004624928:463,279...530,115 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:7664335) UniProt PMID:7664335 NCBI chrNW_004624815:9,054,576...9,135,136
Ensembl chrNW_004624815:9,054,651...9,134,286 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624744:19,782,174...19,975,496
Ensembl chrNW_004624744:19,782,790...19,977,335 		JBrowse link
G Eya2 EYA transcriptional coactivator and phosphatase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:7,620,935...7,852,072
Ensembl chrNW_004624790:7,620,756...7,775,933 		JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:11,820,993...11,932,183
Ensembl chrNW_004624764:11,821,609...11,898,144 		JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624753:7,536,654...7,680,671
Ensembl chrNW_004624753:7,548,694...7,677,472 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624804:8,223,626...8,353,339
Ensembl chrNW_004624804:8,223,550...8,321,756 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624749:29,048,492...29,051,459 JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624779:9,843,068...9,861,959
Ensembl chrNW_004624779:9,843,065...9,862,137 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624765:10,040,259...10,127,449
Ensembl chrNW_004624765:10,057,460...10,116,802 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624816:2,673,058...2,683,306 JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO RGD PMID:1945835 RGD:729332 NCBI chrNW_004624737:17,271,881...17,619,123
Ensembl chrNW_004624737:17,271,992...17,528,889 		JBrowse link
G Nfrkb nuclear factor related to kappaB binding protein involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624812:4,248,077...4,282,948
Ensembl chrNW_004624812:4,249,350...4,280,182 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:18819933) UniProt PMID:18819933 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779 		JBrowse link
G Parg poly(ADP-ribose) glycohydrolase ISO RGD PMID:15158362 RGD:2316739 NCBI chrNW_004624928:54,610...188,948
Ensembl chrNW_004624928:54,874...186,353 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO (PMID:24939902) UniProt PMID:24939902 NCBI chrNW_004624741:6,143,584...6,148,055
Ensembl chrNW_004624741:6,143,332...6,148,898 		JBrowse link
G Rnf168 ring finger protein 168 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624730:61,592,967...61,627,585
Ensembl chrNW_004624730:61,591,943...61,627,170 		JBrowse link
G Rnf8 ring finger protein 8 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624754:20,683,133...20,714,469
Ensembl chrNW_004624754:20,679,867...20,714,522 		JBrowse link
G Rps3 ribosomal protein S3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:1,710,768...1,715,923
Ensembl chrNW_004624817:1,710,768...1,716,224 		JBrowse link
G Ruvbl1 RuvB like AAA ATPase 1 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624961:427,836...460,887 JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624832:5,014,484...5,028,868
Ensembl chrNW_004624832:5,014,484...5,028,885 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:19934257) UniProt PMID:19934257 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:24790221) UniProt PMID:24790221 NCBI chrNW_004624770:13,000,532...13,123,346
Ensembl chrNW_004624770:13,000,316...13,124,031 		JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624832:2,455,643...2,459,379
Ensembl chrNW_004624832:2,455,422...2,459,367 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO (PMID:25928429) UniProt PMID:25928429 NCBI chrNW_004624860:1,416,419...1,455,953
Ensembl chrNW_004624860:1,417,131...1,457,717 		JBrowse link
G Tmem161a transmembrane protein 161A involved_in ISO (PMID:16551573) BHF-UCL PMID:16551573 NCBI chrNW_004624908:2,056,642...2,064,137
Ensembl chrNW_004624908:2,056,885...2,061,872 		JBrowse link
G Trim28 tripartite motif containing 28 involved_in ISO (PMID:17178852) UniProt PMID:17178852 NCBI chrNW_004624832:49,324...56,113 JBrowse link
G Ube2n ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:16129784) HGNC-UCL PMID:16129784 NCBI chrNW_004624750:13,432,657...13,468,797
Ensembl chrNW_004624750:13,432,661...13,457,776 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chrNW_004624735:7,431,955...7,464,698
Ensembl chrNW_004624735:7,432,078...7,464,672 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624814:529,100...568,387
Ensembl chrNW_004624814:529,084...567,666 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:13,096,572...13,240,685
Ensembl chrNW_004624733:13,096,286...13,242,372 		JBrowse link
G Wrap53 WD repeat containing antisense to TP53 involved_in ISO (PMID:25512560) UniProt PMID:25512560 NCBI chrNW_004624786:10,283,721...10,296,568
Ensembl chrNW_004624786:10,283,984...10,296,729 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624734:3,846,753...3,875,294
Ensembl chrNW_004624734:3,846,765...3,875,294 		JBrowse link
positive regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:24,138,086...24,140,900 JBrowse link
G Atm ATM serine/threonine kinase involved_in ISO (PMID:15790808) BHF-UCL PMID:15790808 NCBI chrNW_004624784:2,933,172...3,080,131
Ensembl chrNW_004624784:2,937,499...3,078,216 		JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:23797032) UniProt PMID:23797032 NCBI chrNW_004624828:269,444...301,899
Ensembl chrNW_004624828:269,843...302,301 		JBrowse link
G Fmn2 formin 2 involved_in ISO (PMID:26287480) UniProt PMID:26287480 NCBI chrNW_004624771:10,641,845...10,956,213
Ensembl chrNW_004624771:10,642,515...10,953,480 		JBrowse link
G Foxm1 forkhead box M1 involved_in ISO (PMID:17101782) UniProt PMID:17101782 NCBI chrNW_004624860:206,367...222,035
Ensembl chrNW_004624860:207,242...219,959 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase involved_in ISO (PMID:24147153) BHF-UCL PMID:24147153 NCBI chrNW_004624737:17,271,881...17,619,123
Ensembl chrNW_004624737:17,271,992...17,528,889 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624735:39,095,559...39,153,936
Ensembl chrNW_004624735:39,092,781...39,153,920 		JBrowse link
G Nbn nibrin involved_in ISO (PMID:15790808) BHF-UCL PMID:15790808 NCBI chrNW_004624744:2,013,936...2,061,726
Ensembl chrNW_004624744:2,013,922...2,061,708 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISO (PMID:15790808) BHF-UCL PMID:15790808 NCBI chrNW_004624733:39,445,083...39,544,415
Ensembl chrNW_004624733:39,447,461...39,544,409 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:32538779) UniProt PMID:32538779 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:23911928), (PMID:31995034), (PMID:32538779)
(PMID:31002797)		 UniProt PMID:23911928 PMID:31002797 PMID:31995034 PMID:32538779 NCBI chrNW_004624828:5,441,973...5,449,549
Ensembl chrNW_004624828:5,442,057...5,451,520 		JBrowse link
G Slf1 SMC5-SMC6 complex localization factor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624743:13,327,544...13,394,434
Ensembl chrNW_004624743:13,337,785...13,395,618 		JBrowse link
G Slf2 SMC5-SMC6 complex localization factor 2 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624831:522,190...573,431
Ensembl chrNW_004624831:522,674...570,124 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23509288) UniProt PMID:23509288 NCBI chrNW_004624735:7,724,048...8,172,725 JBrowse link
G Spire1 spire type actin nucleation factor 1 involved_in ISO (PMID:26287480) UniProt PMID:26287480 NCBI chrNW_004624770:19,652,842...19,756,581
Ensembl chrNW_004624770:19,653,848...19,745,067 		JBrowse link
G Spire2 spire type actin nucleation factor 2 involved_in ISO (PMID:26287480) UniProt PMID:26287480 NCBI chrNW_004624746:164,712...193,346
Ensembl chrNW_004624746:164,712...193,346 		JBrowse link
G Timeless timeless circadian regulator involved_in ISO (PMID:23797032) UniProt PMID:23797032 NCBI chrNW_004624802:11,605,116...11,629,911 JBrowse link
G Ube2n ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:16129784) ComplexPortal PMID:16129784 NCBI chrNW_004624750:13,432,657...13,468,797
Ensembl chrNW_004624750:13,432,661...13,457,776 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 involved_in ISO (PMID:16129784) ComplexPortal PMID:16129784 NCBI chrNW_004624735:7,431,955...7,464,698
Ensembl chrNW_004624735:7,432,078...7,464,672 		JBrowse link
G Wrap53 WD repeat containing antisense to TP53 involved_in ISO (PMID:27715493) UniProt PMID:27715493 NCBI chrNW_004624786:10,283,721...10,296,568
Ensembl chrNW_004624786:10,283,984...10,296,729 		JBrowse link
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 involved_in ISO (PMID:31453335), (PMID:32352380), (PMID:32374261), (PMID:32744506) ARUK-UCL PMID:31453335 PMID:32352380 PMID:32374261 PMID:32744506 NCBI chrNW_004624740:16,646,644...16,668,948
Ensembl chrNW_004624740:16,649,335...16,669,415 		JBrowse link
positive regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin beta involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624740:28,087,051...28,090,359
Ensembl chrNW_004624740:28,087,736...28,090,512 		JBrowse link
G Actl6a actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:57,305,105...57,337,653
Ensembl chrNW_004624730:57,305,053...57,337,797 		JBrowse link
G Actr2 actin related protein 2 involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chrNW_004624762:8,282,415...8,339,818
Ensembl chrNW_004624762:8,281,433...8,339,830 		JBrowse link
G Arid2 AT-rich interaction domain 2 involved_in ISO (PMID:28381560) CACAO PMID:28381560 NCBI chrNW_004624816:6,329,888...6,521,535
Ensembl chrNW_004624816:6,332,612...6,521,535 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:25520194) MGI PMID:25520194 NCBI chrNW_004624768:17,422,267...17,522,894
Ensembl chrNW_004624768:17,421,291...17,522,799 		JBrowse link
G Brd8 bromodomain containing 8 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624743:30,950,790...30,994,655
Ensembl chrNW_004624743:30,961,646...30,994,559 		JBrowse link
G Crebbp CREB binding protein involved_in ISO (PMID:38128537) UniProt PMID:38128537 NCBI chrNW_004624824:1,516,481...1,655,364
Ensembl chrNW_004624824:1,517,966...1,655,329 		JBrowse link
G Dmap1 DNA methyltransferase 1 associated protein 1 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624906:109,233...117,571
Ensembl chrNW_004624906:109,065...117,571 		JBrowse link
G Ep400 E1A binding protein p400 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624747:27,709,215...27,815,642
Ensembl chrNW_004624747:27,709,216...27,815,641 		JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624805:4,653,730...4,684,211
Ensembl chrNW_004624805:4,651,051...4,756,899 		JBrowse link
G Epc2 enhancer of polycomb homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624866:1,301,922...1,451,847
Ensembl chrNW_004624866:1,301,584...1,452,825 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:25820262) UniProt PMID:25820262 NCBI chrNW_004624928:458,651...532,201
Ensembl chrNW_004624928:463,279...530,115 		JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25520194) TreeGrafter
MGI		 PMID:25520194 GO_REF:0000118 NCBI chrNW_004624944:358,836...383,161
Ensembl chrNW_004624944:364,563...383,098 		JBrowse link
G Fus FUS RNA binding protein involved_in ISO (PMID:10567410) UniProt PMID:10567410 NCBI chrNW_004624782:14,211,294...14,223,698 JBrowse link
G Hdgfl2 HDGF like 2 involved_in ISO (PMID:26721387) UniProt PMID:26721387 NCBI chrNW_004624828:5,231,497...5,251,402
Ensembl chrNW_004624828:5,227,034...5,251,268 		JBrowse link
G Helq helicase, POLQ like involved_in ISO (PMID:24005329) UniProt PMID:24005329 NCBI chrNW_004624900:375,081...419,698
Ensembl chrNW_004624900:375,216...419,672 		JBrowse link
G Ing3 inhibitor of growth family member 3 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624783:15,094,631...15,126,699
Ensembl chrNW_004624783:15,094,764...15,126,693 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:27153538), (PMID:32832608), (PMID:38961290) ComplexPortal PMID:27153538 PMID:32832608 PMID:38961290 NCBI chrNW_004624767:20,668,759...20,675,367
Ensembl chrNW_004624767:20,666,763...20,675,164 		JBrowse link
G Mbtd1 mbt domain containing 1 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624795:6,900,281...6,966,249
Ensembl chrNW_004624795:6,900,281...6,960,903 		JBrowse link
G Meaf6 MYST/Esa1 associated factor 6 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624764:20,241,824...20,266,499
Ensembl chrNW_004624764:20,244,987...20,266,473 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624941:50,651...71,380
Ensembl chrNW_004624941:50,840...70,767 		JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624954:246,881...258,360
Ensembl chrNW_004624954:246,991...258,360 		JBrowse link
G Mrgbp MRG domain binding protein involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624741:28,571,407...28,576,034
Ensembl chrNW_004624741:28,571,417...28,576,679 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) UniProt PMID:27568553 NCBI chrNW_004624733:42,699,950...42,718,623 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:26344098), (PMID:30356214) UniProt PMID:26344098 PMID:30356214 NCBI chrNW_004624807:446,662...478,571
Ensembl chrNW_004624807:446,647...479,069 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in ISO (PMID:30952868) UniProt PMID:30952868 NCBI chrNW_004624762:9,328,275...9,382,996
Ensembl chrNW_004624762:9,328,109...9,386,067 		JBrowse link
G Pias4 protein inhibitor of activated STAT 4 involved_in ISO (PMID:32832608) UniProt PMID:32832608 NCBI chrNW_004624828:5,551,538...5,572,647
Ensembl chrNW_004624828:5,551,749...5,572,570 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in ISO (PMID:15741314), (PMID:29651020) UniProt PMID:15741314 PMID:29651020 NCBI chrNW_004624832:4,593,594...4,602,514
Ensembl chrNW_004624832:4,589,743...4,602,402 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:17996710), (PMID:17996711) UniProt PMID:17996710 PMID:17996711 NCBI chrNW_004624860:1,627,606...1,643,569
Ensembl chrNW_004624860:1,627,765...1,643,667 		JBrowse link
G Rnf126 ring finger protein 126 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624828:7,856,822...7,865,644
Ensembl chrNW_004624828:7,856,470...7,869,926 		JBrowse link
G Rnf8 ring finger protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:20,683,133...20,714,469
Ensembl chrNW_004624754:20,679,867...20,714,522 		JBrowse link
G Ruvbl1 RuvB like AAA ATPase 1 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624961:427,836...460,887 JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624832:5,014,484...5,028,868
Ensembl chrNW_004624832:5,014,484...5,028,885 		JBrowse link
G Skp2 S-phase kinase associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:18,796,055...18,858,692
Ensembl chrNW_004624759:18,830,323...18,858,712 		JBrowse link
G Timeless timeless circadian regulator involved_in ISO (PMID:26344098), (PMID:30356214) UniProt PMID:26344098 PMID:30356214 NCBI chrNW_004624802:11,605,116...11,629,911 JBrowse link
G Trrap transformation/transcription domain associated protein involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624740:32,349,521...32,472,240
Ensembl chrNW_004624740:32,349,568...32,472,308 		JBrowse link
G Vps72 vacuolar protein sorting 72 homolog involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624772:18,662,515...18,674,214
Ensembl chrNW_004624772:18,662,110...18,674,193 		JBrowse link
G Was WASP actin nucleation promoting factor involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chrNW_004624893:453,793...493,696
Ensembl chrNW_004624893:487,396...493,482 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in ISO (PMID:27239033), (PMID:27463890) UniProt PMID:27239033 PMID:27463890 NCBI chrNW_004624731:1,884,660...1,934,818
Ensembl chrNW_004624731:1,884,666...1,934,754 		JBrowse link
G Wrap53 WD repeat containing antisense to TP53 involved_in ISO (PMID:25512560) UniProt PMID:25512560 NCBI chrNW_004624786:10,283,721...10,296,568
Ensembl chrNW_004624786:10,283,984...10,296,729 		JBrowse link
G Yeats4 YEATS domain containing 4 involved_in ISO (PMID:27153538) ComplexPortal PMID:27153538 NCBI chrNW_004624750:28,446,930...28,470,557
Ensembl chrNW_004624750:28,446,234...28,470,571 		JBrowse link
positive regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyren cell cycle regulator of NHEJ involved_in ISO (PMID:30017584) DisProt PMID:30017584 NCBI chrNW_004624765:15,491,582...15,495,958
Ensembl chrNW_004624765:15,492,165...15,494,214 		JBrowse link
G Fh fumarate hydratase involved_in ISO (PMID:26237645) UniProt PMID:26237645 NCBI chrNW_004624771:11,861,537...11,886,154
Ensembl chrNW_004624771:11,856,884...11,887,066 		JBrowse link
G Kdm4d lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chrNW_004624735:39,640,090...39,695,833 JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISO (PMID:28114273) UniProt PMID:28114273 NCBI chrNW_004624767:18,654,682...18,716,087
Ensembl chrNW_004624767:18,655,193...18,716,252 		JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISO (PMID:28114273) UniProt PMID:28114273 NCBI chrNW_004624832:1,945,194...1,951,016
Ensembl chrNW_004624832:1,945,193...1,951,247 		JBrowse link
G LOC101704237 histone-lysine N-methyltransferase SETMAR involved_in ISO (PMID:20620605), (PMID:21491884) UniProt PMID:20620605 PMID:21491884 NCBI chrNW_004624773:14,680,571...14,692,583 JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chrNW_004624818:1,274,553...1,286,750
Ensembl chrNW_004624818:1,282,082...1,286,997 		JBrowse link
G Parp3 poly(ADP-ribose) polymerase family member 3 involved_in ISO (PMID:24598253) UniProt PMID:24598253 NCBI chrNW_004624730:5,761,635...5,768,138
Ensembl chrNW_004624730:5,762,148...5,769,094 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in ISO (PMID:12032095) CACAO PMID:12032095 NCBI chrNW_004624832:4,462,675...4,467,676
Ensembl chrNW_004624832:4,462,766...4,467,616 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:26237645) UniProt PMID:26237645 NCBI chrNW_004624735:7,534,483...7,702,079
Ensembl chrNW_004624735:7,534,506...7,700,305 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (PMID:28241136)
(PMID:23306437), (PMID:23333305)		 UniProt PMID:23306437 PMID:23333305 PMID:28241136 NCBI chrNW_004624866:5,619,758...5,680,165 JBrowse link
G Shld1 shieldin complex subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:6,630,746...6,766,314
Ensembl chrNW_004624741:6,638,889...6,721,118 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893), (PMID:29789392) UniProt PMID:29656893 PMID:29789392 NCBI chrNW_004624841:21,077...133,155
Ensembl chrNW_004624841:20,431...133,163 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:25294876) UniProt PMID:25294876 NCBI chrNW_004624770:13,000,532...13,123,346
Ensembl chrNW_004624770:13,000,316...13,124,031 		JBrowse link
G Top2b DNA topoisomerase II beta ISO RGD PMID:22019940 RGD:13432143 NCBI chrNW_004624788:3,493,188...3,590,138 JBrowse link
G Wrap53 WD repeat containing antisense to TP53 involved_in ISO (PMID:25512560) UniProt PMID:25512560 NCBI chrNW_004624786:10,283,721...10,296,568
Ensembl chrNW_004624786:10,283,984...10,296,729 		JBrowse link
positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bok BCL2 family apoptosis regulator BOK involved_in ISO (PMID:26015568)
(PMID:26949185)		 UniProt PMID:26015568 PMID:26949185 NCBI chrNW_004624847:5,564,671...5,573,459
Ensembl chrNW_004624847:5,564,979...5,573,459 		JBrowse link
G Ddit3 DNA damage inducible transcript 3 involved_in ISO (PMID:22761832) ParkinsonsUK-UCL PMID:22761832 NCBI chrNW_004624802:10,437,998...10,443,278 JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO (PMID:22240901) MGI PMID:22240901 NCBI chrNW_004624749:15,867,444...15,950,757
Ensembl chrNW_004624749:15,869,569...15,950,757 		JBrowse link
G Nck1 NCK adaptor protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:13,271,575...13,366,930
Ensembl chrNW_004624730:13,226,315...13,366,661 		JBrowse link
G Nck2 NCK adaptor protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:9,765,308...9,884,472 JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (PMID:21216966) ParkinsonsUK-UCL PMID:21216966 NCBI chrNW_004624770:19,808,400...19,877,494
Ensembl chrNW_004624770:19,808,400...19,876,503 		JBrowse link
G Rnf183 ring finger protein 183 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624760:21,795,690...21,802,691
Ensembl chrNW_004624760:21,795,464...21,802,952 		JBrowse link
G Serinc3 serine incorporator 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624790:9,951,067...9,983,251
Ensembl chrNW_004624790:9,951,233...9,980,234 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20955178) UniProt PMID:20955178 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946 		JBrowse link
G Spop speckle type BTB/POZ protein acts_upstream_of_or_within ISO (PMID:20811152) MGI PMID:20811152 NCBI chrNW_004624795:5,698,131...5,769,209 JBrowse link
positive regulation of endoplasmic reticulum unfolded protein response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ern1 endoplasmic reticulum to nucleus signaling 1 involved_in ISO (PMID:28128204) UniProt PMID:28128204 NCBI chrNW_004624849:1,521,996...1,625,878
Ensembl chrNW_004624849:1,525,235...1,625,893 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO (PMID:20348923) UniProt PMID:20348923 NCBI chrNW_004624815:1,290,106...1,376,961
Ensembl chrNW_004624815:1,289,997...1,369,610 		JBrowse link
positive regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 involved_in ISO (PMID:17000876) ParkinsonsUK-UCL PMID:17000876 NCBI chrNW_004624734:8,685,994...8,726,329 JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:24424410) ParkinsonsUK-UCL PMID:24424410 NCBI chrNW_004624754:24,559,483...24,571,073
Ensembl chrNW_004624754:24,559,801...24,571,073 		JBrowse link
G Bcap31 B cell receptor associated protein 31 involved_in ISO (PMID:18555783) ParkinsonsUK-UCL PMID:18555783 NCBI chrNW_004624946:398,901...420,767
Ensembl chrNW_004624946:399,227...419,642 		JBrowse link
G Cav1 caveolin 1 involved_in ISO (PMID:24089527) ParkinsonsUK-UCL PMID:24089527 NCBI chrNW_004624827:2,844,855...2,878,367
Ensembl chrNW_004624827:2,844,115...2,879,179 		JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:29,069,995...29,081,085
Ensembl chrNW_004624746:29,068,350...29,081,085 		JBrowse link
G Rnf185 ring finger protein 185 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:7,642,198...7,693,944
Ensembl chrNW_004624747:7,641,916...7,694,033 		JBrowse link
G Rnft1 ring finger protein, transmembrane 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624871:1,707,570...1,721,026
Ensembl chrNW_004624871:1,707,509...1,721,078 		JBrowse link
G Rnft2 ring finger protein, transmembrane 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624747:16,346,149...16,459,312
Ensembl chrNW_004624747:16,389,005...16,459,805 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23246001) ParkinsonsUK-UCL PMID:23246001 NCBI chrNW_004624828:5,832,274...5,854,472
Ensembl chrNW_004624828:5,834,586...5,843,528 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO (PMID:26265139) UniProt PMID:26265139 NCBI chrNW_004624913:1,491,873...1,494,249
Ensembl chrNW_004624913:1,491,991...1,494,249 		JBrowse link
G Tmem259 transmembrane protein 259 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:7,606,177...7,614,644
Ensembl chrNW_004624828:7,606,339...7,614,107 		JBrowse link
G Tmem67 transmembrane protein 67 ISO RGD PMID:19815549 RGD:8554391 NCBI chrNW_004624763:1,219,779...1,281,297
Ensembl chrNW_004624763:1,219,827...1,264,071 		JBrowse link
G Tmx1 thioredoxin related transmembrane protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:17,713,812...17,730,521
Ensembl chrNW_004624731:17,718,868...17,730,586 		JBrowse link
G Ubqln1 ubiquilin 1 involved_in ISO (PMID:18307982) UniProt PMID:18307982 NCBI chrNW_004624809:6,434,842...6,487,442
Ensembl chrNW_004624809:6,436,658...6,487,251 		JBrowse link
G Ubqln2 ubiquilin 2 involved_in ISO (PMID:18307982) UniProt PMID:18307982 NCBI chrNW_004624910:1,547,942...1,551,323
Ensembl chrNW_004624910:1,548,249...1,550,126 		JBrowse link
G Usp13 ubiquitin specific peptidase 13 involved_in ISO (PMID:24424410) ParkinsonsUK-UCL PMID:24424410 NCBI chrNW_004624730:57,384,878...57,495,761
Ensembl chrNW_004624730:57,384,884...57,495,765 		JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in ISO (PMID:19911006) MGI PMID:19911006 NCBI chrNW_004624755:22,818,653...22,841,717
Ensembl chrNW_004624755:22,824,143...22,841,850 		JBrowse link
positive regulation of fear response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkar1b protein kinase cAMP-dependent type I regulatory subunit beta ISO RGD PMID:33479380 RGD:150519900 NCBI chrNW_004624740:26,202,882...26,315,987
Ensembl chrNW_004624740:26,202,375...26,315,352 		JBrowse link
positive regulation of fever generation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl5 C-C motif chemokine ligand 5 ISO RGD PMID:15066130 RGD:2307192 NCBI chrNW_004624875:3,334,136...3,342,085
Ensembl chrNW_004624875:3,334,078...3,341,614 		JBrowse link
G Cnr1 cannabinoid receptor 1 ISO RGD PMID:19681872 RGD:2314645 NCBI chrNW_004624799:6,100,709...6,126,530
Ensembl chrNW_004624799:6,101,728...6,126,520 		JBrowse link
G Il1b interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760 		JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:16933973 RGD:1642453 NCBI chrNW_004624814:6,597,248...6,744,294
Ensembl chrNW_004624814:6,597,005...6,744,286 		JBrowse link
G Ptger3 prostaglandin E receptor 3 involved_in ISO (PMID:19940926) BHF-UCL PMID:19940926 NCBI chrNW_004624742:25,177,340...25,356,911 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624814:6,897,818...6,904,890
Ensembl chrNW_004624814:6,897,857...6,903,728 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:19940926) BHF-UCL PMID:19940926 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531 		JBrowse link
positive regulation of fever generation by positive regulation of prostaglandin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfrsf11a TNF receptor superfamily member 11a involved_in ISO (PMID:19940926) BHF-UCL PMID:19940926 NCBI chrNW_004624792:8,029,383...8,087,824
Ensembl chrNW_004624792:8,029,364...8,084,424 		JBrowse link
G Tnfsf11 TNF superfamily member 11 involved_in ISO (PMID:19940926) BHF-UCL PMID:19940926 NCBI chrNW_004624748:12,527,221...12,555,551
Ensembl chrNW_004624748:12,527,478...12,555,405 		JBrowse link
positive regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F11 coagulation factor XI involved_in ISO (PMID:89876) BHF-UCL PMID:89876 NCBI chrNW_004624769:17,093,643...17,115,716
Ensembl chrNW_004624769:17,094,169...17,115,222 		JBrowse link
G F12 coagulation factor XII involved_in ISO (PMID:89876) BHF-UCL PMID:89876 NCBI chrNW_004624733:12,666,410...12,683,273
Ensembl chrNW_004624733:12,675,966...12,683,117 		JBrowse link
G Klkb1 kallikrein B1 involved_in ISO (PMID:89876) BHF-UCL PMID:89876 NCBI chrNW_004624769:17,066,055...17,088,587
Ensembl chrNW_004624769:17,067,342...17,087,408 		JBrowse link
G Plg plasminogen involved_in ISO (PMID:26667841), (PMID:6438154) AgBase PMID:6438154 PMID:26667841 NCBI chrNW_004624855:2,362,793...2,401,519
Ensembl chrNW_004624855:2,360,229...2,402,079 		JBrowse link
positive regulation of histamine secretion by mast cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g3 phospholipase A2 group III involved_in ISO (PMID:23624557) UniProt PMID:23624557 NCBI chrNW_004624747:7,602,848...7,607,872
Ensembl chrNW_004624747:7,603,277...7,607,753 		JBrowse link
G Snx4 sorting nexin 4 involved_in ISO (PMID:18253931) UniProt PMID:18253931 NCBI chrNW_004624731:1,522,467...1,585,793
Ensembl chrNW_004624731:1,522,098...1,586,066 		JBrowse link
G Vamp7 vesicle associated membrane protein 7 involved_in ISO (PMID:18253931) UniProt PMID:18253931 NCBI chrNW_004624980:40,937...94,547
Ensembl chrNW_004624980:40,843...94,528 		JBrowse link
G Vamp8 vesicle associated membrane protein 8 involved_in ISO (PMID:18253931) UniProt PMID:18253931 NCBI chrNW_004624749:17,558,429...17,562,765
Ensembl chrNW_004624749:17,558,429...17,562,723 		JBrowse link
positive regulation of hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr7 C-C motif chemokine receptor 7 involved_in ISO (PMID:10520991) BHF-UCL PMID:10520991 NCBI chrNW_004624795:2,777,766...2,787,664
Ensembl chrNW_004624795:2,779,627...2,788,897 		JBrowse link
positive regulation of inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) involved_in ISO (PMID:9359705) UniProt PMID:9359705 NCBI chrNW_004624782:449,217...590,306
Ensembl chrNW_004624782:449,288...591,310 		JBrowse link
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (PMID:19397475) BHF-UCL PMID:19397475 NCBI chrNW_004624737:13,459,274...13,474,686 JBrowse link
G Adora3 adenosine A3 receptor acts_upstream_of_or_within ISO (PMID:15240734) MGI PMID:15240734 NCBI chrNW_004624772:7,189,381...7,232,919
Ensembl chrNW_004624772:7,229,093...7,232,837 		JBrowse link
G Agt angiotensinogen involved_in ISO (PMID:17906677) BHF-UCL PMID:17906677 NCBI chrNW_004624775:18,846,222...18,856,093
Ensembl chrNW_004624775:18,849,118...18,855,577 		JBrowse link
G App amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372 		JBrowse link
G Camk2n1 calcium/calmodulin dependent protein kinase II inhibitor 1 involved_in ISO (PMID:33746041) UniProt PMID:33746041 NCBI chrNW_004624764:5,544,589...5,547,811
Ensembl chrNW_004624764:5,544,484...5,547,683 		JBrowse link
G Casp4 caspase 4 involved_in ISO (PMID:23348507)
(PMID:30392956), (PMID:34671164)
(PMID:33377178), (PMID:34671164), (PMID:37993712), (PMID:37993714)		 UniProt PMID:23348507 PMID:30392956 PMID:33377178 PMID:34671164 PMID:37993712 More... NCBI chrNW_004624918:145,661...187,006 JBrowse link
G Ccl1 C-C motif chemokine ligand 1 involved_in ISO (PMID:28972028) BHF-UCL PMID:28972028 NCBI chrNW_004624875:2,224,784...2,229,465 JBrowse link
G Ccl24 C-C motif chemokine ligand 24 involved_in ISO (PMID:19841166) BHF-UCL PMID:19841166 NCBI chrNW_004624740:14,640,486...14,652,414
Ensembl chrNW_004624740:14,640,292...14,643,020 		JBrowse link
G Ccn4 cellular communication network factor 4 involved_in ISO (PMID:25281430) UniProt PMID:25281430 NCBI chrNW_004624735:22,789,784...22,819,527
Ensembl chrNW_004624735:22,788,475...22,819,648 		JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:23736979) AgBase PMID:23736979 NCBI chrNW_004624774:9,699,876...9,708,871
Ensembl chrNW_004624774:9,700,393...9,709,514 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha involved_in ISO (PMID:21131957) ARUK-UCL PMID:21131957 NCBI chrNW_004624794:9,809,007...9,813,418 JBrowse link
G Cebpb CCAAT enhancer binding protein beta involved_in ISO (PMID:26526992) ARUK-UCL PMID:26526992 NCBI chrNW_004624790:5,367,808...5,369,686
Ensembl chrNW_004624790:5,368,349...5,369,377 		JBrowse link
G Clock clock circadian regulator involved_in ISO (PMID:22894897) UniProt PMID:22894897 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164 		JBrowse link
G Ctss cathepsin S acts_upstream_of_or_within ISO (PMID:12163455) MGI PMID:12163455 NCBI chrNW_004624772:18,421,905...18,446,857
Ensembl chrNW_004624772:18,419,736...18,438,786 		JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in ISO (PMID:11777952) UniProt PMID:11777952 NCBI chrNW_004624746:28,677,956...28,688,638
Ensembl chrNW_004624746:28,677,709...28,689,122 		JBrowse link
G Ddt D-dopachrome tautomerase involved_in ISO (PMID:21817065) BHF-UCL PMID:21817065 NCBI chrNW_004624747:12,473,181...12,474,898 JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:28636595) UniProt PMID:28636595 NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075 		JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor involved_in ISO (PMID:21310411) BHF-UCL PMID:21310411 NCBI chrNW_004624812:2,795,961...2,920,263
Ensembl chrNW_004624812:2,795,686...2,920,274 		JBrowse link
G Fem1a fem-1 homolog A involved_in ISO (PMID:27315781) UniProt PMID:27315781 NCBI chrNW_004624828:4,989,025...4,992,730
Ensembl chrNW_004624828:4,990,299...4,992,287 		JBrowse link
G Gpr4 G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624832:7,566,645...7,579,497
Ensembl chrNW_004624832:7,575,758...7,576,846 		JBrowse link
G Gprc5b G protein-coupled receptor class C group 5 member B involved_in ISO (PMID:23169819) UniProt PMID:23169819 NCBI chrNW_004624782:3,163,265...3,184,978
Ensembl chrNW_004624782:3,164,467...3,176,119 		JBrowse link
G Gpsm3 G protein signaling modulator 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23280397) TreeGrafter
MGI		 PMID:23280397 GO_REF:0000118 NCBI chrNW_004624754:24,130,303...24,132,332
Ensembl chrNW_004624754:24,129,812...24,132,333 		JBrowse link
G Gsdmd gasdermin D involved_in ISO (PMID:32109412), (PMID:33883744)
(PMID:27383986)		 UniProt PMID:27383986 PMID:32109412 PMID:33883744 NCBI chrNW_004624735:13,187,810...13,192,843
Ensembl chrNW_004624735:13,187,687...13,192,736 		JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A ISO RGD PMID:23362947 RGD:401938623 NCBI chrNW_004624748:8,154,288...8,223,226
Ensembl chrNW_004624748:8,155,107...8,223,259 		JBrowse link
G Hyal2 hyaluronidase 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004624730:4,170,045...4,175,264
Ensembl chrNW_004624730:4,169,742...4,175,242 		JBrowse link
G Ifi35 interferon induced protein 35 involved_in ISO (PMID:29038465) UniProt PMID:29038465 NCBI chrNW_004624795:1,260,476...1,268,015
Ensembl chrNW_004624795:1,260,476...1,262,080 		JBrowse link
G Ifng interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534 		JBrowse link
G Il16 interleukin 16 involved_in ISO (PMID:30634164) ARUK-UCL PMID:30634164 NCBI chrNW_004624768:20,597,560...20,704,437 JBrowse link
G Il17ra interleukin 17 receptor A involved_in
acts_upstream_of_or_within		 ISO (PMID:33723527)
(PMID:18768888)		 UniProt
MGI		 PMID:18768888 PMID:33723527 NCBI chrNW_004624735:10,139,787...10,164,074
Ensembl chrNW_004624735:10,138,418...10,164,198 		JBrowse link
G Il17rb interleukin 17 receptor B acts_upstream_of_or_within ISO (PMID:18768888) MGI PMID:18768888 NCBI chrNW_004624822:3,339,236...3,355,278
Ensembl chrNW_004624822:3,337,940...3,355,199 		JBrowse link
G Il18 interleukin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:7,294,286...7,312,959
Ensembl chrNW_004624784:7,294,183...7,304,687 		JBrowse link
G Il1b interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760 		JBrowse link
G Il1rl1 interleukin 1 receptor like 1 involved_in ISO (PMID:19841166) BHF-UCL PMID:19841166 NCBI chrNW_004624749:6,795,822...6,873,068
Ensembl chrNW_004624749:6,795,748...6,873,701 		JBrowse link
G Il33 interleukin 33 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:10,733,944...10,786,188
Ensembl chrNW_004624736:10,764,486...10,784,864 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO (PMID:24255059) BHF-UCL PMID:24255059 NCBI chrNW_004624828:2,999,122...3,021,893
Ensembl chrNW_004624828:2,999,169...3,021,987 		JBrowse link
G Lgals1 galectin 1 involved_in ISO (PMID:12730878) ComplexPortal PMID:12730878 NCBI chrNW_004624752:10,220,115...10,223,434
Ensembl chrNW_004624752:10,219,872...10,223,317 		JBrowse link
G Lgals2 galectin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:10,315,705...10,321,253
Ensembl chrNW_004624752:10,319,011...10,321,069 		JBrowse link
G Lilra5 leukocyte immunoglobulin like receptor A5 involved_in ISO (PMID:12393390), (PMID:19009525) UniProt PMID:12393390 PMID:19009525 NCBI chrNW_004624832:2,252,029...2,264,041 JBrowse link
G LOC101712296 leukocyte surface antigen CD47 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624731:41,461,109...41,504,905
Ensembl chrNW_004624731:41,461,314...41,508,739 		JBrowse link
G LOC110350590 leukocyte surface antigen CD47-like involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624731:40,834,555...40,862,417 JBrowse link
G Lpl lipoprotein lipase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:15,652,553...15,680,107
Ensembl chrNW_004624758:15,651,992...15,680,762 		JBrowse link
G Map3k8 mitogen-activated protein kinase kinase kinase 8 involved_in ISO (PMID:16424369) UniProt PMID:16424369 NCBI chrNW_004624805:2,611,297...2,633,650
Ensembl chrNW_004624805:2,611,038...2,633,943 		JBrowse link
G Mapk13 mitogen-activated protein kinase 13 involved_in ISO (PMID:19279008) BHF-UCL PMID:19279008 NCBI chrNW_004624754:21,506,086...21,513,803
Ensembl chrNW_004624754:21,506,369...21,513,801 		JBrowse link
G Mdk midkine involved_in ISO (PMID:22323540) UniProt PMID:22323540 NCBI chrNW_004624767:2,171,096...2,173,436
Ensembl chrNW_004624767:2,171,096...2,173,512 		JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in ISO (PMID:27270401) ComplexPortal PMID:27270401 NCBI chrNW_004624824:1,035,172...1,047,632
Ensembl chrNW_004624824:1,035,094...1,047,678 		JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D involved_in ISO (PMID:25757720) UniProt PMID:25757720 NCBI chrNW_004624739:26,117,665...26,152,322 JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624838:1,384,337...1,387,602
Ensembl chrNW_004624838:1,384,204...1,390,205 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:23071313) ARUK-UCL PMID:23071313 NCBI chrNW_004624789:15,612,311...15,623,878
Ensembl chrNW_004624789:15,612,335...15,624,152 		JBrowse link
G Ninj1 ninjurin 1 involved_in ISO (PMID:26677008) UniProt PMID:26677008 NCBI chrNW_004624868:3,430,539...3,442,205
Ensembl chrNW_004624868:3,430,209...3,445,542 		JBrowse link
G Nkg7 natural killer cell granule protein 7 involved_in ISO (PMID:32839608) UniProt PMID:32839608 NCBI chrNW_004624832:3,501,924...3,502,750
Ensembl chrNW_004624832:3,501,973...3,504,773 		JBrowse link
G Nlrp10 NLR family pyrin domain containing 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:172,727...177,029 JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in ISO (PMID:25686105), (PMID:31086327), (PMID:31086329), (PMID:31189953), (PMID:35114687), (PMID:35254907), (PMID:35559676)
(PMID:34861190)		 UniProt PMID:25686105 PMID:31086327 PMID:31086329 PMID:31189953 PMID:34861190 More... NCBI chrNW_004624937:564,191...584,470 JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 involved_in ISO (PMID:33377178)
(PMID:26494172)		 UniProt PMID:26494172 PMID:33377178 NCBI chrNW_004624766:22,143,405...22,150,903 JBrowse link
G Nmi N-myc and STAT interactor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624866:4,230,258...4,263,156
Ensembl chrNW_004624866:4,229,535...4,263,688 		JBrowse link
G Osm oncostatin M involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:6,580,717...6,584,695 JBrowse link
G Pdcd4 programmed cell death 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:35,414,078...35,451,023 JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO (PMID:21571906) UniProt PMID:21571906 NCBI chrNW_004624817:4,269,422...4,367,576
Ensembl chrNW_004624817:4,269,347...4,369,486 		JBrowse link
G Prkca protein kinase C alpha acts_upstream_of_or_within ISO (PMID:12928424) MGI PMID:12928424 NCBI chrNW_004624870:1,589,775...2,023,160
Ensembl chrNW_004624870:1,596,102...2,023,172 		JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in ISO (PMID:19465928) UniProt PMID:19465928 NCBI chrNW_004624759:14,243,887...14,259,090
Ensembl chrNW_004624759:14,244,899...14,258,445 		JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:27270401)
(PMID:12191486)		 ComplexPortal PMID:12191486 PMID:27270401 NCBI chrNW_004624782:14,247,333...14,249,861
Ensembl chrNW_004624782:14,247,864...14,249,000 		JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624756:21,806,570...21,837,351
Ensembl chrNW_004624756:21,805,599...21,830,699 		JBrowse link
G Rnh1 ribonuclease/angiogenin inhibitor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:21,945,412...21,956,482
Ensembl chrNW_004624766:21,951,260...21,958,058 		JBrowse link
G S100a8 S100 calcium binding protein A8 involved_in ISO (PMID:12626582) UniProt PMID:12626582 NCBI chrNW_004624885:784,528...785,623 JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in ISO (PMID:12626582) UniProt PMID:12626582 NCBI chrNW_004624885:767,455...770,023
Ensembl chrNW_004624885:762,934...770,129 		JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO (PMID:17032919) BHF-UCL PMID:17032919 NCBI chrNW_004624740:16,128,145...16,136,696
Ensembl chrNW_004624740:16,128,059...16,137,337 		JBrowse link
G Setd4 SET domain containing 4 involved_in ISO (PMID:31376731) UniProt PMID:31376731 NCBI chrNW_004624745:23,928,041...24,148,644
Ensembl chrNW_004624745:24,104,617...24,148,617 		JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:25533483) ParkinsonsUK-UCL PMID:25533483 NCBI chrNW_004624757:17,393,046...17,528,783
Ensembl chrNW_004624757:17,392,998...17,528,320 		JBrowse link
G Sucnr1 succinate receptor 1 acts_upstream_of_or_within ISO (PMID:28382382) MGI PMID:28382382 NCBI chrNW_004624730:29,450,625...29,508,464
Ensembl chrNW_004624730:29,496,758...29,505,363 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:32141990) BHF-UCL PMID:32141990 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605 		JBrowse link
G Tlr2 toll like receptor 2 involved_in ISO (PMID:22198949)
(PMID:19740627)
(PMID:28078022)		 ARUK-UCL
RGD
BHF-UCL		 PMID:19740627 PMID:22198949 PMID:28078022 PMID:30877771 RGD:597538506 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Tlr3 toll like receptor 3 involved_in ISO (PMID:19740627) BHF-UCL PMID:19740627 NCBI chrNW_004624769:16,925,969...16,945,250
Ensembl chrNW_004624769:16,925,984...16,941,196 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (PMID:20037584) ARUK-UCL PMID:20037584 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
G Tlr7 toll like receptor 7 involved_in ISO (PMID:19740627) BHF-UCL PMID:19740627 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A acts_upstream_of_or_within ISO (PMID:11588035)
(PMID:24211183)		 MGI PMID:11588035 PMID:24211183 NCBI chrNW_004624860:3,111,244...3,123,041
Ensembl chrNW_004624860:3,111,630...3,122,711 		JBrowse link
G Tnfsf18 TNF superfamily member 18 involved_in ISO (PMID:24107315) UniProt PMID:24107315 NCBI chrNW_004624771:8,711,093...8,722,518
Ensembl chrNW_004624771:8,711,017...8,722,539 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:20844189) BHF-UCL PMID:20844189 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 involved_in ISO (PMID:22011580) UniProt PMID:22011580 NCBI chrNW_004624733:40,964,020...41,006,381 JBrowse link
G Tradd TNFRSF1A associated via death domain involved_in ISO (PMID:25732226) ARUK-UCL PMID:25732226 NCBI chrNW_004624746:19,155,058...19,165,702
Ensembl chrNW_004624746:19,155,113...19,165,705 		JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 involved_in ISO (PMID:23021218) UniProt PMID:23021218 NCBI chrNW_004624747:10,675,625...10,685,351 JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18174455) BHF-UCL PMID:18174455 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288 		JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISO (PMID:27819681) UniProt PMID:27819681 NCBI chrNW_004624741:24,022,433...24,033,090 JBrowse link
G Zp3 zona pellucida glycoprotein 3 involved_in ISO (PMID:18667753) UniProt PMID:18667753 NCBI chrNW_004624740:15,037,818...15,044,207
Ensembl chrNW_004624740:15,037,943...15,044,193 		JBrowse link
positive regulation of inflammatory response to antigenic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (PMID:10791997), (PMID:15314074) MGI PMID:10791997 PMID:15314074 NCBI chrNW_004624780:15,287,426...15,292,292
Ensembl chrNW_004624780:15,287,433...15,292,292 		JBrowse link
G Cd28 CD28 molecule acts_upstream_of_or_within ISO (PMID:10791997) MGI PMID:10791997 NCBI chrNW_004624765:12,650,092...12,667,168 JBrowse link
G Cd81 CD81 molecule involved_in ISO (PMID:11046035) UniProt PMID:11046035 NCBI chrNW_004624767:15,192,446...15,210,923
Ensembl chrNW_004624767:15,192,452...15,210,922 		JBrowse link
G Kars1 lysyl-tRNA synthetase 1 involved_in ISO (PMID:15851690) CAFA PMID:15851690 NCBI chrNW_004624746:11,337,505...11,354,950
Ensembl chrNW_004624746:11,337,529...11,353,797 		JBrowse link
positive regulation of inflammatory response to wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule involved_in ISO (PMID:19264983) UniProt PMID:19264983 NCBI chrNW_004624780:15,287,426...15,292,292
Ensembl chrNW_004624780:15,287,433...15,292,292 		JBrowse link
G Grn granulin precursor involved_in ISO (PMID:12524533) UniProt PMID:12524533 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165 		JBrowse link
G Mdk midkine involved_in ISO (PMID:24458438), (PMID:28183532) UniProt PMID:24458438 PMID:28183532 NCBI chrNW_004624767:2,171,096...2,173,436
Ensembl chrNW_004624767:2,171,096...2,173,512 		JBrowse link
positive regulation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (PMID:20683884) BHF-UCL PMID:20683884 NCBI chrNW_004624737:13,459,274...13,474,686 JBrowse link
G Akirin2 akirin 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624799:6,620,102...6,644,286
Ensembl chrNW_004624799:6,625,549...6,644,286 		JBrowse link
G Card9 caspase recruitment domain family member 9 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:1,533,247...1,542,529
Ensembl chrNW_004624760:1,533,390...1,540,162 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:18,109,011...18,161,378
Ensembl chrNW_004624767:18,109,008...18,161,639 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:28636595) UniProt PMID:28636595 NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075 		JBrowse link
G Ereg epiregulin involved_in ISO (PMID:16182244) UniProt PMID:16182244 NCBI chrNW_004624730:1,339,017...1,353,869
Ensembl chrNW_004624730:1,339,518...1,353,429 		JBrowse link
G Fadd Fas associated via death domain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:17,050,929...17,059,648
Ensembl chrNW_004624767:17,055,509...17,059,705 		JBrowse link
G Fpr2 formyl peptide receptor 2 involved_in ISO (PMID:25505240) ARUK-UCL PMID:25505240 NCBI chrNW_004624832:3,275,365...3,282,308 JBrowse link
G Gbp5 guanylate binding protein 5 involved_in ISO (PMID:22461501) UniProt PMID:22461501 NCBI chrNW_004624742:8,324,902...8,335,965 JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:20937702) UniProt PMID:20937702 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:19890330) UniProt PMID:19890330 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:19890330) UniProt PMID:19890330 NCBI chrNW_004624769:4,834,998...4,837,111 JBrowse link
G Ifi35 interferon induced protein 35 involved_in ISO (PMID:29038465) UniProt PMID:29038465 NCBI chrNW_004624795:1,260,476...1,268,015
Ensembl chrNW_004624795:1,260,476...1,262,080 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:32817552) UniProt PMID:32817552 NCBI chrNW_004624767:20,668,759...20,675,367
Ensembl chrNW_004624767:20,666,763...20,675,164 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:20937702) UniProt PMID:20937702 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G Nmi N-myc and STAT interactor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624866:4,230,258...4,263,156
Ensembl chrNW_004624866:4,229,535...4,263,688 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:21156799)
(PMID:15692051)		 BHF-UCL
MGI		 PMID:15692051 PMID:21156799 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Polr3b RNA polymerase III subunit B involved_in ISO (PMID:19609254) UniProt PMID:19609254 NCBI chrNW_004624750:2,906,041...3,004,241
Ensembl chrNW_004624750:2,905,747...3,004,237 		JBrowse link
G Polr3c RNA polymerase III subunit C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:17,196,418...17,212,265
Ensembl chrNW_004624772:17,196,388...17,212,727 		JBrowse link
G Polr3d RNA polymerase III subunit D involved_in ISO (PMID:19631370) UniProt PMID:19631370 NCBI chrNW_004624758:17,817,716...17,823,442
Ensembl chrNW_004624758:17,817,690...17,824,427 		JBrowse link
G Polr3f RNA polymerase III subunit F involved_in ISO (PMID:19631370) UniProt PMID:19631370 NCBI chrNW_004624741:19,196,639...19,213,252
Ensembl chrNW_004624741:19,196,605...19,210,403 		JBrowse link
G Polr3g RNA polymerase III subunit G involved_in ISO (PMID:19609254), (PMID:19631370) UniProt PMID:19609254 PMID:19631370 NCBI chrNW_004624743:9,733,372...9,765,967 JBrowse link
G Riok3 RIO kinase 3 involved_in ISO (PMID:24807708) UniProt PMID:24807708 NCBI chrNW_004624770:8,675,501...8,696,999
Ensembl chrNW_004624770:8,675,294...8,697,620 		JBrowse link
G Rnf185 ring finger protein 185 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:7,642,198...7,693,944
Ensembl chrNW_004624747:7,641,916...7,694,033 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:32433612) UniProt PMID:32433612 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in ISO (PMID:21531336) UniProt PMID:21531336 NCBI chrNW_004624849:3,602,103...3,623,922
Ensembl chrNW_004624849:3,602,261...3,623,465 		JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:25,427,519...25,448,180
Ensembl chrNW_004624762:25,430,926...25,448,114 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:16301656) BHF-UCL PMID:16301656 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Tlr8 toll like receptor 8 involved_in ISO (PMID:16123302) UniProt PMID:16123302 NCBI chrNW_004624882:1,240,519...1,247,311
Ensembl chrNW_004624882:1,240,626...1,312,468 		JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (PMID:29426904) UniProt PMID:29426904 NCBI chrNW_004624740:16,154,441...16,163,057
Ensembl chrNW_004624740:16,159,874...16,162,090 		JBrowse link
G Zdhhc4 zDHHC palmitoyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:30,759,134...30,768,802
Ensembl chrNW_004624740:30,759,182...30,769,331 		JBrowse link
positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbh1 F-box DNA helicase 1 acts_upstream_of_or_within ISO (PMID:23361013) MGI PMID:23361013 NCBI chrNW_004624775:788,388...844,968
Ensembl chrNW_004624775:788,463...837,524 		JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (PMID:26219591) MGI PMID:26219591 NCBI chrNW_004624767:1,199,367...1,218,425
Ensembl chrNW_004624767:1,199,291...1,221,123 		JBrowse link
G Nacc2 NACC family member 2 involved_in ISO (PMID:22926524) BHF-UCL PMID:22926524 NCBI chrNW_004624760:1,319,092...1,386,692
Ensembl chrNW_004624760:1,318,993...1,349,810 		JBrowse link
G Pias4 protein inhibitor of activated STAT 4 acts_upstream_of_or_within ISO (PMID:16816390) MGI PMID:16816390 NCBI chrNW_004624828:5,551,538...5,572,647
Ensembl chrNW_004624828:5,551,749...5,572,570 		JBrowse link
G Rad9a RAD9 checkpoint clamp component A acts_upstream_of_or_within ISO (PMID:15983387) MGI PMID:15983387 NCBI chrNW_004624767:19,123,710...19,180,505
Ensembl chrNW_004624767:19,124,517...19,176,231 		JBrowse link
G Rps3 ribosomal protein S3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:1,710,768...1,715,923
Ensembl chrNW_004624817:1,710,768...1,716,224 		JBrowse link
G Skil SKI like proto-oncogene acts_upstream_of_or_within ISO (PMID:10811619) MGI PMID:10811619 NCBI chrNW_004624730:48,376,625...48,404,059
Ensembl chrNW_004624730:48,377,499...48,404,141 		JBrowse link
positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Knl1 kinetochore scaffold 1 acts_upstream_of_or_within ISO (PMID:31197172) MGI PMID:31197172 NCBI chrNW_004624804:7,884,580...7,952,567
Ensembl chrNW_004624804:7,889,689...7,952,384 		JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004624786:10,948,624...10,953,381
Ensembl chrNW_004624786:10,946,302...10,953,564 		JBrowse link
G Steap3 STEAP3 metalloreductase acts_upstream_of_or_within ISO (PMID:18617898) MGI PMID:18617898 NCBI chrNW_004624732:25,913,034...25,958,537
Ensembl chrNW_004624732:25,913,736...25,958,582 		JBrowse link
G Tp73 tumor protein p73 acts_upstream_of_or_within ISO (PMID:15983387) MGI PMID:15983387 NCBI chrNW_004624818:6,775,588...6,817,187
Ensembl chrNW_004624818:6,775,599...6,809,289 		JBrowse link
positive regulation of intrinsic apoptotic signaling pathway in response to osmotic stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2 associated agonist of cell death involved_in ISO (PMID:21716255) CAFA PMID:21716255 NCBI chrNW_004624767:22,025,721...22,037,283
Ensembl chrNW_004624767:22,026,133...22,037,277 		JBrowse link
positive regulation of IRE1-mediated unfolded protein response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agr2 anterior gradient 2, protein disulphide isomerase family member involved_in ISO (PMID:23220234) UniProt PMID:23220234 NCBI chrNW_004624739:13,428,049...13,440,949
Ensembl chrNW_004624739:13,428,130...13,442,070 		JBrowse link
G Tmem33 transmembrane protein 33 involved_in ISO (PMID:26268696) UniProt PMID:26268696 NCBI chrNW_004624761:24,983,553...25,014,582
Ensembl chrNW_004624761:24,987,555...25,014,993 		JBrowse link
positive regulation of leukotriene production involved in inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine1 serpin family E member 1 involved_in ISO (PMID:19916862) BHF-UCL PMID:19916862 NCBI chrNW_004624740:16,128,145...16,136,696
Ensembl chrNW_004624740:16,128,059...16,137,337 		JBrowse link
positive regulation of MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd17 ankyrin repeat domain 17 involved_in ISO (PMID:22328336) UniProt PMID:22328336 NCBI chrNW_004624735:34,337,722...34,516,891
Ensembl chrNW_004624735:34,337,835...34,519,559 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in ISO (PMID:20080593) UniProt PMID:20080593 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
positive regulation of microglial cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsc cathepsin C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624845:1,783,807...1,816,471
Ensembl chrNW_004624845:1,783,918...1,815,981 		JBrowse link
G Kcnn4 potassium calcium-activated channel subfamily N member 4 ISO RGD PMID:21750563 RGD:329955444 NCBI chrNW_004624907:1,266,348...1,279,258
Ensembl chrNW_004624907:1,266,348...1,278,699 		JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO RGD PMID:22302802 RGD:13462052 NCBI chrNW_004624778:106,594...279,325
Ensembl chrNW_004624778:108,761...279,230 		JBrowse link
G Mmp8 matrix metallopeptidase 8 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624878:124,396...174,584
Ensembl chrNW_004624878:164,171...175,654 		JBrowse link
G Stap1 signal transducing adaptor family member 1 involved_in ISO (PMID:19100238) BHF-UCL PMID:19100238 NCBI chrNW_004624761:1,361,271...1,409,548
Ensembl chrNW_004624761:1,361,498...1,409,674 		JBrowse link
G Tafa3 TAFA chemokine like family member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25595455) MGI
TreeGrafter		 PMID:25595455 GO_REF:0000118 NCBI chrNW_004624772:8,495,509...8,505,585
Ensembl chrNW_004624772:8,502,094...8,505,469 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:24990881)
(PMID:24990881), (PMID:25631124), (PMID:29752066), (PMID:30617257)
(PMID:31370707)		 UniProt
ARUK-UCL		 PMID:24990881 PMID:25631124 PMID:29752066 PMID:30617257 PMID:31370707 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
G Ttbk1 tau tubulin kinase 1 involved_in ISO (PMID:19118186) ARUK-UCL PMID:19118186 NCBI chrNW_004624754:16,288,172...16,322,794
Ensembl chrNW_004624754:16,290,613...16,320,070 		JBrowse link
positive regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 involved_in ISO (PMID:26221039) UniProt PMID:26221039 NCBI chrNW_004624752:518,563...524,497 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:15014079) UniProt PMID:15014079 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Prkcg protein kinase C gamma involved_in ISO (PMID:15808853) HGNC-UCL PMID:15808853 NCBI chrNW_004624832:2,548,286...2,566,365
Ensembl chrNW_004624832:2,547,535...2,566,402 		JBrowse link
positive regulation of mitotic DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:15342622) UniProt PMID:15342622 NCBI chrNW_004624787:10,392,738...10,566,563
Ensembl chrNW_004624787:10,405,701...10,565,943 		JBrowse link
positive regulation of MyD88-dependent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc134 coiled-coil domain containing 134 involved_in ISO (PMID:38670073) UniProt PMID:38670073 NCBI chrNW_004624752:6,872,192...6,885,435
Ensembl chrNW_004624752:6,871,911...6,885,396 		JBrowse link
positive regulation of natural killer cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd226 CD226 molecule acts_upstream_of_or_within
involved_in		 IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004624806:11,324,239...11,390,487
Ensembl chrNW_004624806:11,324,344...11,388,206 		JBrowse link
G Clnk cytokine dependent hematopoietic cell linker involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624755:20,667,325...20,817,497 JBrowse link
G Il21 interleukin 21 acts_upstream_of_or_within ISO (PMID:14764669) MGI PMID:14764669 NCBI chrNW_004624777:3,054,368...3,061,304
Ensembl chrNW_004624777:3,054,368...3,061,304 		JBrowse link
positive regulation of natural killer cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in ISO (PMID:23632890) UniProt PMID:23632890 NCBI chrNW_004624746:13,997,903...14,081,140
Ensembl chrNW_004624746:13,997,681...14,081,197 		JBrowse link
G Lamp1 lysosomal associated membrane protein 1 involved_in ISO (PMID:23632890) UniProt PMID:23632890 NCBI chrNW_004624793:661,322...675,603
Ensembl chrNW_004624793:661,342...675,675 		JBrowse link
positive regulation of natural killer cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in ISO (PMID:23632890) UniProt PMID:23632890 NCBI chrNW_004624746:13,997,903...14,081,140
Ensembl chrNW_004624746:13,997,681...14,081,197 		JBrowse link
G Bid BH3 interacting domain death agonist ISO RGD PMID:17893612 RGD:408346749 NCBI chrNW_004624735:9,557,732...9,590,862
Ensembl chrNW_004624735:9,579,979...9,589,260 		JBrowse link
G Cadm1 cell adhesion molecule 1 involved_in ISO (PMID:15811952) UniProt PMID:15811952 NCBI chrNW_004624784:10,595,876...10,933,024
Ensembl chrNW_004624784:10,591,824...10,932,981 		JBrowse link
G Cd226 CD226 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624806:11,324,239...11,390,487
Ensembl chrNW_004624806:11,324,344...11,388,206 		JBrowse link
G Crtam cytotoxic and regulatory T cell molecule involved_in ISO (PMID:15811952) HGNC-UCL
UniProt		 PMID:15811952 NCBI chrNW_004624880:2,229,201...2,240,068 JBrowse link
G Il12a interleukin 12A involved_in ISO (PMID:2204066) UniProt PMID:2204066 NCBI chrNW_004624730:37,787,772...37,794,871
Ensembl chrNW_004624730:37,787,909...37,794,940 		JBrowse link
G Il18rap interleukin 18 receptor accessory protein acts_upstream_of_or_within ISO (PMID:15843532) MGI PMID:15843532 NCBI chrNW_004624749:6,930,025...6,957,241 JBrowse link
G Il21 interleukin 21 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14764669) TreeGrafter
MGI		 PMID:14764669 GO_REF:0000118 NCBI chrNW_004624777:3,054,368...3,061,304
Ensembl chrNW_004624777:3,054,368...3,061,304 		JBrowse link
G Lag3 lymphocyte activating 3 acts_upstream_of_or_within ISO (PMID:8602528) MGI PMID:8602528 NCBI chrNW_004624860:3,454,587...3,461,649
Ensembl chrNW_004624860:3,456,347...3,461,592 		JBrowse link
G Lamp1 lysosomal associated membrane protein 1 involved_in ISO (PMID:23632890) UniProt PMID:23632890 NCBI chrNW_004624793:661,322...675,603
Ensembl chrNW_004624793:661,342...675,675 		JBrowse link
G LOC101711887 natural killer cells antigen CD94 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:27,025,423...27,037,076 JBrowse link
G LOC101713324 NKG2-D type II integral membrane protein involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624752:27,064,952...27,076,074 JBrowse link
G LOC101713681 NKG2-A/NKG2-B type II integral membrane protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:27,152,550...27,156,788 JBrowse link
G LOC101715335 natural killer cells antigen CD94-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624826:5,910,337...5,912,506 JBrowse link
G LOC110349333 natural killer cells antigen CD94-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:27,009,822...27,016,128 JBrowse link
G Ncr3 natural cytotoxicity triggering receptor 3 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624754:24,607,623...24,612,716 JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO (PMID:16304049) BHF-UCL PMID:16304049 NCBI chrNW_004624907:1,713,786...1,739,158
Ensembl chrNW_004624907:1,713,443...1,740,627 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in ISO (PMID:19933860) UniProt PMID:19933860 NCBI chrNW_004624804:5,691,011...5,763,314
Ensembl chrNW_004624804:5,690,400...5,763,288 		JBrowse link
G Sh2d1a SH2 domain containing 1A acts_upstream_of_or_within ISO (PMID:19648922)
(PMID:16127454)		 MGI PMID:16127454 PMID:19648922 NCBI chrNW_004624797:3,120,123...3,142,564
Ensembl chrNW_004624797:3,120,123...3,142,564 		JBrowse link
G Sh2d1b SH2 domain containing 1B acts_upstream_of_or_within ISO (PMID:19648922)
(PMID:20962259)		 MGI PMID:19648922 PMID:20962259 NCBI chrNW_004624787:9,077,658...9,078,053 JBrowse link
G Slamf6 SLAM family member 6 involved_in ISO (PMID:16920955) UniProt PMID:16920955 NCBI chrNW_004624794:754,530...796,732 JBrowse link
G Vav1 vav guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (PMID:20962259) MGI PMID:20962259 NCBI chrNW_004624828:3,838,464...3,896,698
Ensembl chrNW_004624828:3,838,706...3,897,080 		JBrowse link
positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd226 CD226 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624806:11,324,239...11,390,487
Ensembl chrNW_004624806:11,324,344...11,388,206 		JBrowse link
G Crtam cytotoxic and regulatory T cell molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624880:2,229,201...2,240,068 JBrowse link
G Il12a interleukin 12A involved_in ISO (PMID:7903063) UniProt PMID:7903063 NCBI chrNW_004624730:37,787,772...37,794,871
Ensembl chrNW_004624730:37,787,909...37,794,940 		JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:7903063) UniProt PMID:7903063 NCBI chrNW_004624733:30,146,050...30,156,144
Ensembl chrNW_004624733:30,146,050...30,154,589 		JBrowse link
G LOC101712173 poliovirus receptor homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:1,582,636...1,596,528 JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:1,713,786...1,739,158
Ensembl chrNW_004624907:1,713,443...1,740,627 		JBrowse link
positive regulation of natural killer cell mediated immunity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpp4 dipeptidyl peptidase 4 ISO RGD PMID:19327106 RGD:41408336 NCBI chrNW_004624732:3,460,529...3,535,252
Ensembl chrNW_004624732:3,460,118...3,535,249 		JBrowse link
G Rasgrp4 RAS guanyl releasing protein 4 involved_in ISO (PMID:26982501) UniProt PMID:26982501 NCBI chrNW_004624794:11,868,390...11,886,722
Ensembl chrNW_004624794:11,870,431...11,882,212 		JBrowse link
positive regulation of neuroinflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp8 matrix metallopeptidase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624878:124,396...174,584
Ensembl chrNW_004624878:164,171...175,654 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISO (PMID:16374777) UniProt PMID:16374777 NCBI chrNW_004624782:13,042,938...13,044,298
Ensembl chrNW_004624782:13,042,939...13,044,267 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (PMID:32514138) ARUK-UCL PMID:32514138 NCBI chrNW_004624746:5,678,057...5,824,663
Ensembl chrNW_004624746:5,682,666...5,821,855 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:25631124) UniProt PMID:25631124 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
positive regulation of neuron projection regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hgf hepatocyte growth factor ISO RGD PMID:17549731 RGD:2317487 NCBI chrNW_004624739:30,233,589...30,307,508
Ensembl chrNW_004624739:30,236,146...30,307,356 		JBrowse link
positive regulation of neutrophil mediated killing of fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in ISO (PMID:15546957) UniProt PMID:15546957 NCBI chrNW_004624753:5,737,720...5,749,313
Ensembl chrNW_004624753:5,737,237...5,752,966 		JBrowse link
G Pomc proopiomelanocortin involved_in ISO (PMID:10670585) UniProt PMID:10670585 NCBI chrNW_004624738:7,442,223...7,448,513
Ensembl chrNW_004624738:7,442,292...7,445,020 		JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:21501162) UniProt PMID:21501162 NCBI chrNW_004624869:1,326,605...1,337,195 JBrowse link
positive regulation of NLRP3 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atat1 alpha tubulin acetyltransferase 1 acts_upstream_of_or_within ISO (PMID:23502856) MGI PMID:23502856 NCBI chrNW_004624754:25,058,312...25,069,052
Ensembl chrNW_004624754:25,058,204...25,069,561 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO (PMID:28943315)
(PMID:23246432)		 UniProt PMID:23246432 PMID:28943315 NCBI chrNW_004624963:142,987...212,190
Ensembl chrNW_004624963:145,580...212,064 		JBrowse link
G Btk Bruton tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624902:1,173,101...1,216,662
Ensembl chrNW_004624902:1,182,682...1,216,171 		JBrowse link
G Casp4 caspase 4 involved_in ISO (PMID:26173909) UniProt PMID:26173909 NCBI chrNW_004624918:145,661...187,006 JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in ISO (PMID:23812099) UniProt PMID:23812099 NCBI chrNW_004624739:29,341,620...29,441,232
Ensembl chrNW_004624739:29,407,568...29,441,333 		JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:31511697) UniProt PMID:31511697 NCBI chrNW_004624762:14,290,267...14,305,437
Ensembl chrNW_004624762:14,290,267...14,305,633 		JBrowse link
G Dhx33 DEAH-box helicase 33 involved_in ISO (PMID:23871209) UniProt PMID:23871209 NCBI chrNW_004624786:9,247,294...9,266,645
Ensembl chrNW_004624786:9,248,382...9,266,519 		JBrowse link
G Gbp5 guanylate binding protein 5 involved_in ISO (PMID:22461501) UniProt PMID:22461501 NCBI chrNW_004624742:8,324,902...8,335,965 JBrowse link
G Lats1 large tumor suppressor kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624785:8,356,238...8,405,877
Ensembl chrNW_004624785:8,369,922...8,408,919 		JBrowse link
G Lats2 large tumor suppressor kinase 2 involved_in ISO (PMID:39173637) UniProt PMID:39173637 NCBI chrNW_004624776:16,572,598...16,640,412
Ensembl chrNW_004624776:16,585,025...16,638,520 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (PMID:28943315) UniProt PMID:28943315 NCBI chrNW_004624928:1,442,216...1,494,275
Ensembl chrNW_004624928:1,439,146...1,494,266 		JBrowse link
G Marchf5 membrane associated ring-CH-type finger 5 involved_in ISO (PMID:37575012) UniProt PMID:37575012 NCBI chrNW_004624737:3,570,415...3,614,380
Ensembl chrNW_004624737:3,570,255...3,615,057 		JBrowse link
G Mark4 microtubule affinity regulating kinase 4 involved_in ISO (PMID:28656979) UniProt PMID:28656979 NCBI chrNW_004624907:2,184,702...2,212,673
Ensembl chrNW_004624907:2,184,729...2,212,666 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:23582325) UniProt PMID:23582325 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (PMID:33718825) UniProt PMID:33718825 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G Nek7 NIMA related kinase 7 involved_in ISO (PMID:26642356)
(PMID:26814970)
(PMID:31189953), (PMID:36442502), (PMID:39173637)		 UniProt PMID:26642356 PMID:26814970 PMID:31189953 PMID:36442502 PMID:39173637 NCBI chrNW_004624798:2,116,888...2,283,061
Ensembl chrNW_004624798:2,116,900...2,198,999 		JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in ISO (PMID:29958799) UniProt PMID:29958799 NCBI chrNW_004624747:21,725,813...21,768,123
Ensembl chrNW_004624747:21,725,395...21,759,453 		JBrowse link
G Plcg2 phospholipase C gamma 2 acts_upstream_of_or_within ISO (PMID:32514138) ARUK-UCL PMID:32514138 NCBI chrNW_004624746:5,678,057...5,824,663
Ensembl chrNW_004624746:5,682,666...5,821,855 		JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:38,012,694...38,033,745
Ensembl chrNW_004624733:38,012,392...38,036,914 		JBrowse link
G Prkd1 protein kinase D1 involved_in ISO (PMID:28716882) UniProt PMID:28716882 NCBI chrNW_004624820:2,408,562...2,726,199
Ensembl chrNW_004624820:2,408,360...2,726,606 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990 		JBrowse link
G Stmp1 short transmembrane mitochondrial protein 1 involved_in ISO (PMID:31836654) UniProt PMID:31836654 NCBI chrNW_004624765:15,941,281...15,969,027 JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (PMID:23812099) UniProt PMID:23812099 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
G Zdhhc1 zDHHC palmitoyltransferase 1 involved_in ISO (PMID:39173637) UniProt PMID:39173637 NCBI chrNW_004624746:18,901,622...18,921,798
Ensembl chrNW_004624746:18,901,589...18,922,066 		JBrowse link
G Zdhhc5 zDHHC palmitoyltransferase 5 involved_in ISO (PMID:38092000) UniProt PMID:38092000 NCBI chrNW_004624864:3,027,537...3,049,567
Ensembl chrNW_004624864:3,028,170...3,048,945 		JBrowse link
positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:19570976), (PMID:21277849) UniProt PMID:19570976 PMID:21277849 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
G Slc46a2 solute carrier family 46 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:22,124,321...22,134,601
Ensembl chrNW_004624760:22,124,321...22,134,906 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nagk N-acetylglucosamine kinase involved_in ISO (PMID:36002575) UniProt PMID:36002575 NCBI chrNW_004624762:2,382,708...2,391,896
Ensembl chrNW_004624762:2,382,709...2,391,656 		JBrowse link
G Peli3 pellino E3 ubiquitin protein ligase family member 3 acts_upstream_of_or_within ISO (PMID:23892723) MGI PMID:23892723 NCBI chrNW_004624767:19,920,149...19,938,892
Ensembl chrNW_004624767:19,920,687...19,929,638 		JBrowse link
G Slc15a3 solute carrier family 15 member 3 involved_in ISO (PMID:24695226) UniProt PMID:24695226 NCBI chrNW_004624926:294,263...303,326
Ensembl chrNW_004624926:294,376...303,248 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:24695226) UniProt PMID:24695226 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
positive regulation of pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc5 zDHHC palmitoyltransferase 5 involved_in ISO (PMID:31649195) UniProt PMID:31649195 NCBI chrNW_004624864:3,027,537...3,049,567
Ensembl chrNW_004624864:3,028,170...3,048,945 		JBrowse link
positive regulation of PERK-mediated unfolded protein response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agr2 anterior gradient 2, protein disulphide isomerase family member involved_in ISO (PMID:23220234) UniProt PMID:23220234 NCBI chrNW_004624739:13,428,049...13,440,949
Ensembl chrNW_004624739:13,428,130...13,442,070 		JBrowse link
G Bok BCL2 family apoptosis regulator BOK involved_in ISO (PMID:26015568) UniProt PMID:26015568 NCBI chrNW_004624847:5,564,671...5,573,459
Ensembl chrNW_004624847:5,564,979...5,573,459 		JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (PMID:21216966) ParkinsonsUK-UCL PMID:21216966 NCBI chrNW_004624770:19,808,400...19,877,494
Ensembl chrNW_004624770:19,808,400...19,876,503 		JBrowse link
G Tmem33 transmembrane protein 33 involved_in ISO (PMID:26268696) UniProt PMID:26268696 NCBI chrNW_004624761:24,983,553...25,014,582
Ensembl chrNW_004624761:24,987,555...25,014,993 		JBrowse link
positive regulation of pyroptotic inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbp5 guanylate binding protein 5 involved_in ISO (PMID:25774715), (PMID:25774716), (PMID:30589883)
(PMID:24715728)		 UniProt PMID:24715728 PMID:25774715 PMID:25774716 PMID:30589883 NCBI chrNW_004624742:8,324,902...8,335,965 JBrowse link
G Zdhhc5 zDHHC palmitoyltransferase 5 involved_in ISO (PMID:38530158)
(PMID:38530158), (PMID:38599239)		 UniProt PMID:38530158 PMID:38599239 NCBI chrNW_004624864:3,027,537...3,049,567
Ensembl chrNW_004624864:3,028,170...3,048,945 		JBrowse link
G Zdhhc9 zDHHC palmitoyltransferase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624797:9,027,316...9,060,321
Ensembl chrNW_004624797:9,023,833...9,060,855 		JBrowse link
positive regulation of respiratory burst involved in inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbp lipopolysaccharide binding protein involved_in ISO (PMID:9338787) BHF-UCL PMID:9338787 NCBI chrNW_004624842:1,306,299...1,332,269
Ensembl chrNW_004624842:1,301,831...1,332,346 		JBrowse link
G Rps19 ribosomal protein S19 involved_in ISO (PMID:15750715) UniProt PMID:15750715 NCBI chrNW_004624907:811,069...818,218
Ensembl chrNW_004624907:810,984...818,614 		JBrowse link
positive regulation of response to endoplasmic reticulum stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO (PMID:21803450) ARUK-UCL PMID:21803450 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb involved_in ISO PMID:23921129
(PMID:23921129)		 ARUK-UCL PMID:23921129 RGD:12910988 NCBI chrNW_004624826:97,605...112,101 JBrowse link
positive regulation of response to oxidative stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101706296 core histone macro-H2A.1 involved_in ISO (PMID:23022728) UniProt PMID:23022728 NCBI chrNW_004624733:11,650,067...11,714,399
Ensembl chrNW_004624733:11,650,537...11,715,999 		JBrowse link
G Selenon selenoprotein N involved_in ISO (PMID:19557870) UniProt PMID:19557870 NCBI chrNW_004624764:9,892,161...9,905,984
Ensembl chrNW_004624764:9,892,176...9,903,990 		JBrowse link
positive regulation of response to reactive oxygen species term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epor erythropoietin receptor ISO hydrogen peroxide-induced epithelial cell death RGD PMID:23636173 RGD:10401070 NCBI chrNW_004624828:3,181,772...3,187,242
Ensembl chrNW_004624828:3,181,957...3,187,231 		JBrowse link
positive regulation of response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:7,947,554...7,957,553
Ensembl chrNW_004624817:7,947,639...7,957,462 		JBrowse link
positive regulation of response to wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO RGD PMID:20671235 RGD:11341707 NCBI chrNW_004624836:2,804,349...3,058,125
Ensembl chrNW_004624836:2,808,681...2,993,452 		JBrowse link
positive regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd17 ankyrin repeat domain 17 involved_in ISO (PMID:22328336) UniProt PMID:22328336 NCBI chrNW_004624735:34,337,722...34,516,891
Ensembl chrNW_004624735:34,337,835...34,519,559 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in ISO (PMID:20080593) UniProt PMID:20080593 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Pum1 pumilio RNA binding family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:14,361,376...14,486,460
Ensembl chrNW_004624764:14,361,012...14,486,542 		JBrowse link
G Pum2 pumilio RNA binding family member 2 involved_in ISO (PMID:25340845) UniProt PMID:25340845 NCBI chrNW_004624738:2,951,253...3,042,905
Ensembl chrNW_004624738:2,950,415...3,043,011 		JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in ISO (PMID:24399297) CACAO PMID:24399297 NCBI chrNW_004624802:5,559,107...5,682,338
Ensembl chrNW_004624802:5,560,574...5,682,300 		JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 involved_in ISO (PMID:21102435) UniProt PMID:21102435 NCBI chrNW_004624765:19,441,299...19,509,468
Ensembl chrNW_004624765:19,439,923...19,509,186 		JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:1,399,405...1,400,980
Ensembl chrNW_004624741:1,399,481...1,400,701 		JBrowse link
positive regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Whr1 winged helix repair factor 1 involved_in ISO (PMID:38252411) UniProt PMID:38252411 NCBI chrNW_004624754:24,271,284...24,280,963
Ensembl chrNW_004624754:24,271,875...24,280,939 		JBrowse link
positive regulation of sprouting of injured axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pum2 pumilio RNA binding family member 2 ISO RGD PMID:31606248 RGD:242905203 NCBI chrNW_004624738:2,951,253...3,042,905
Ensembl chrNW_004624738:2,950,415...3,043,011 		JBrowse link
positive regulation of SREBP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paqr3 progestin and adipoQ receptor family member 3 involved_in ISO (PMID:26311497) UniProt PMID:26311497 NCBI chrNW_004624757:12,140,041...12,303,568
Ensembl chrNW_004624757:12,138,681...12,159,661 		JBrowse link
G Spring1 SREBF pathway regulator in golgi 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624747:16,459,395...16,477,551
Ensembl chrNW_004624747:16,459,476...16,477,489 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (PMID:29420538) UniProt PMID:29420538 NCBI chrNW_004624885:2,474,427...2,489,024
Ensembl chrNW_004624885:2,475,727...2,489,030 		JBrowse link
positive regulation of stress-activated MAPK cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6ip5 ARF like GTPase 6 interacting protein 5 involved_in ISO (PMID:18387645) UniProt PMID:18387645 NCBI chrNW_004624773:3,666,255...3,685,446
Ensembl chrNW_004624773:3,666,072...3,688,094 		JBrowse link
G Card9 caspase recruitment domain family member 9 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:29080677) UniProt
Ensembl		 PMID:29080677 GO_REF:0000107 NCBI chrNW_004624760:1,533,247...1,542,529
Ensembl chrNW_004624760:1,533,390...1,540,162 		JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO (PMID:27288407) UniProt PMID:27288407 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 ISO RGD PMID:19211730 RGD:5130956 NCBI chrNW_004624739:114,383...161,010
Ensembl chrNW_004624739:114,342...161,044 		JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in ISO (PMID:20038207) UniProt PMID:20038207 NCBI chrNW_004624738:18,716,623...18,764,243
Ensembl chrNW_004624738:18,717,092...18,758,457 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ISO RGD PMID:17161379 RGD:5508698 NCBI chrNW_004624951:681,559...711,476
Ensembl chrNW_004624951:682,178...711,474 		JBrowse link
G Igfbp6 insulin like growth factor binding protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624904:1,153,890...1,159,095
Ensembl chrNW_004624904:1,154,882...1,159,209 		JBrowse link
G Il1a interleukin 1 alpha ISO RGD PMID:15671867 RGD:1358666 NCBI chrNW_004624749:12,795,967...12,805,658
Ensembl chrNW_004624749:12,795,946...12,805,154 		JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:12629164 PMID:15671867 RGD:1358666 RGD:1626685 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760 		JBrowse link
G Il26 interleukin 26 involved_in ISO (PMID:18483078) UniProt PMID:18483078 NCBI chrNW_004624802:83,483...114,240 JBrowse link
G Inava innate immunity activator involved_in ISO (PMID:28436939) UniProt PMID:28436939 NCBI chrNW_004624807:9,718,307...9,738,282
Ensembl chrNW_004624807:9,718,307...9,738,148 		JBrowse link
G Kiss1 KiSS-1 metastasis suppressor NOT ISO RGD PMID:16222076 RGD:1599289 NCBI chrNW_004624807:6,800,144...6,805,555
Ensembl chrNW_004624807:6,803,265...6,805,433 		JBrowse link
G Klhdc10 kelch domain containing 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624783:6,118,814...6,188,198
Ensembl chrNW_004624783:6,118,829...6,188,611 		JBrowse link
G Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 ISO RGD PMID:12024021 RGD:2302280 NCBI chrNW_004624752:162,724...171,984
Ensembl chrNW_004624752:163,462...171,859 		JBrowse link
G Mid1 midline 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624882:3,504,660...3,876,526
Ensembl chrNW_004624882:3,627,879...3,876,526 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 acts_upstream_of_or_within ISO (PMID:18261938) MGI PMID:18261938 NCBI chrNW_004624739:285,791...339,752
Ensembl chrNW_004624739:285,689...341,956 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:17187069)
(PMID:18261938)		 MGI PMID:17187069 PMID:18261938 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Pdcd10 programmed cell death 10 involved_in ISO (PMID:22652780) UniProt PMID:22652780 NCBI chrNW_004624730:45,653,470...45,698,461
Ensembl chrNW_004624730:45,654,022...45,678,745 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:11894097)
(PMID:11894098), (PMID:18261938)		 MGI PMID:11894097 PMID:11894098 PMID:18261938 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:8,975,216...8,982,825
Ensembl chrNW_004624786:8,974,587...9,007,986 		JBrowse link
G Sema4c semaphorin 4C involved_in ISO (PMID:17498836) UniProt PMID:17498836 NCBI chrNW_004624749:2,737,251...2,747,540
Ensembl chrNW_004624749:2,737,251...2,745,979 		JBrowse link
G Stk25 serine/threonine kinase 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624847:5,511,590...5,530,773
Ensembl chrNW_004624847:5,511,007...5,530,764 		JBrowse link
G Taok1 TAO kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:1,920,037...2,054,795
Ensembl chrNW_004624786:1,968,991...2,045,948 		JBrowse link
G Taok2 TAO kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624782:13,234,422...13,263,495
Ensembl chrNW_004624782:13,256,085...13,262,626
Ensembl chrNW_004624782:13,256,085...13,262,626 		JBrowse link
G Taok3 TAO kinase 3 involved_in ISO (PMID:17396146) UniProt PMID:17396146 NCBI chrNW_004624747:15,142,378...15,331,197
Ensembl chrNW_004624747:15,241,065...15,331,935 		JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624835:2,363,059...2,436,536
Ensembl chrNW_004624835:2,363,139...2,437,643 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
positive regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:57,305,105...57,337,653
Ensembl chrNW_004624730:57,305,053...57,337,797 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624842:910,178...933,495
Ensembl chrNW_004624842:912,336...933,573 		JBrowse link
G Actr8 actin related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624822:3,319,694...3,335,359
Ensembl chrNW_004624822:3,319,439...3,335,360 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624804:8,223,626...8,353,339
Ensembl chrNW_004624804:8,223,550...8,321,756 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624749:29,048,492...29,051,459 JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624779:9,843,068...9,861,959
Ensembl chrNW_004624779:9,843,065...9,862,137 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624765:10,040,259...10,127,449
Ensembl chrNW_004624765:10,057,460...10,116,802 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624816:2,673,058...2,683,306 JBrowse link
G Nfrkb nuclear factor related to kappaB binding protein involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624812:4,248,077...4,282,948
Ensembl chrNW_004624812:4,249,350...4,280,182 		JBrowse link
G Ruvbl1 RuvB like AAA ATPase 1 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624961:427,836...460,887 JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624832:5,014,484...5,028,868
Ensembl chrNW_004624832:5,014,484...5,028,885 		JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624832:2,455,643...2,459,379
Ensembl chrNW_004624832:2,455,422...2,459,367 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624814:529,100...568,387
Ensembl chrNW_004624814:529,084...567,666 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624734:3,846,753...3,875,294
Ensembl chrNW_004624734:3,846,765...3,875,294 		JBrowse link
positive regulation of toll-like receptor 13 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Treml4 triggering receptor expressed on myeloid cells like 4 involved_in ISO (PMID:25848864) UniProt PMID:25848864 NCBI chrNW_004624754:17,600,341...17,608,766 JBrowse link
positive regulation of toll-like receptor 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:19865078) UniProt PMID:19865078 NCBI chrNW_004624869:1,326,605...1,337,195 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:16267105) UniProt PMID:16267105 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G LOC101717043 cytochrome b-245 light chain involved_in ISO (PMID:22423966) UniProt PMID:22423966 NCBI chrNW_004624746:911,852...919,361
Ensembl chrNW_004624746:911,842...919,362 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (PMID:26599367), (PMID:28471450) UniProt PMID:26599367 PMID:28471450 NCBI chrNW_004624839:4,908,861...5,000,218
Ensembl chrNW_004624839:4,908,639...5,000,677 		JBrowse link
G Pja2 praja ring finger ubiquitin ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624743:27,251,937...27,331,213
Ensembl chrNW_004624743:27,254,436...27,301,934 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:19509286) BHF-UCL PMID:19509286 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Tlr1 toll like receptor 1 involved_in ISO (PMID:22198949) ARUK-UCL PMID:22198949 NCBI chrNW_004624840:7,287,772...7,349,282
Ensembl chrNW_004624840:7,287,781...7,290,162 		JBrowse link
positive regulation of toll-like receptor 3 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004624827:2,844,855...2,878,367
Ensembl chrNW_004624827:2,844,115...2,879,179 		JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:19865078) UniProt PMID:19865078 NCBI chrNW_004624869:1,326,605...1,337,195 JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004624754:24,992,961...25,000,463
Ensembl chrNW_004624754:24,992,929...25,003,759 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:19734906) MGI PMID:19734906 NCBI chrNW_004624762:9,328,275...9,382,996
Ensembl chrNW_004624762:9,328,109...9,386,067 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:17322885) BHF-UCL PMID:17322885 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Trim3 tripartite motif containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:7,965,976...7,991,426
Ensembl chrNW_004624817:7,965,976...7,991,411 		JBrowse link
G Wdfy1 WD repeat and FYVE domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624823:1,353,601...1,405,762
Ensembl chrNW_004624823:1,353,621...1,401,160 		JBrowse link
positive regulation of toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISO (PMID:24380872) UniProt PMID:24380872 NCBI chrNW_004624743:33,372,023...33,374,438
Ensembl chrNW_004624743:33,367,898...33,373,922 		JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:18622013) UniProt PMID:18622013 NCBI chrNW_004624869:1,326,605...1,337,195 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:16267105) UniProt PMID:16267105 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Ifi35 interferon induced protein 35 involved_in ISO (PMID:29038465) UniProt PMID:29038465 NCBI chrNW_004624795:1,260,476...1,268,015
Ensembl chrNW_004624795:1,260,476...1,262,080 		JBrowse link
G Lbp lipopolysaccharide binding protein involved_in ISO (PMID:11528597) BHF-UCL PMID:11528597 NCBI chrNW_004624842:1,306,299...1,332,269
Ensembl chrNW_004624842:1,301,831...1,332,346 		JBrowse link
G LOC101722352 TIR domain-containing adapter molecule 2 involved_in ISO (PMID:22685567)
(PMID:19412184)		 UniProt PMID:19412184 PMID:22685567 NCBI chrNW_004624733:6,304,454...6,341,827 JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:20345905) UniProt PMID:20345905 NCBI chrNW_004624730:74,636,554...74,656,817
Ensembl chrNW_004624730:74,636,522...74,656,886 		JBrowse link
G Ninj1 ninjurin 1 involved_in ISO (PMID:25860173) UniProt PMID:25860173 NCBI chrNW_004624868:3,430,539...3,442,205
Ensembl chrNW_004624868:3,430,209...3,445,542 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 involved_in ISO (PMID:18511497) BHF-UCL PMID:18511497 NCBI chrNW_004624767:1,459,601...1,473,224
Ensembl chrNW_004624767:1,459,601...1,467,795 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:19734906) MGI PMID:19734906 NCBI chrNW_004624762:9,328,275...9,382,996
Ensembl chrNW_004624762:9,328,109...9,386,067 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:19509286) BHF-UCL PMID:19509286 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Wdfy1 WD repeat and FYVE domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624823:1,353,601...1,405,762
Ensembl chrNW_004624823:1,353,621...1,401,160 		JBrowse link
G Znrf1 zinc and ring finger 1 involved_in ISO (PMID:28593998) UniProt PMID:28593998 NCBI chrNW_004624746:11,847,627...11,954,637
Ensembl chrNW_004624746:11,848,425...11,954,784 		JBrowse link
positive regulation of toll-like receptor 7 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:30341167) UniProt PMID:30341167 NCBI chrNW_004624762:14,290,267...14,305,437
Ensembl chrNW_004624762:14,290,267...14,305,633 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in ISO (PMID:21435586) UniProt PMID:21435586 NCBI chrNW_004624846:3,395,536...3,408,616
Ensembl chrNW_004624846:3,395,406...3,408,626 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:21045126), (PMID:25238095)
(PMID:25238095), (PMID:32433612)		 UniProt PMID:21045126 PMID:25238095 PMID:32433612 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:25,427,519...25,448,180
Ensembl chrNW_004624762:25,430,926...25,448,114 		JBrowse link
G Treml4 triggering receptor expressed on myeloid cells like 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:17,600,341...17,608,766 JBrowse link
positive regulation of toll-like receptor 8 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:30341167) UniProt PMID:30341167 NCBI chrNW_004624762:14,290,267...14,305,437
Ensembl chrNW_004624762:14,290,267...14,305,633 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:32433612) UniProt PMID:32433612 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:25,427,519...25,448,180
Ensembl chrNW_004624762:25,430,926...25,448,114 		JBrowse link
positive regulation of toll-like receptor 9 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in ISO (PMID:21435586) UniProt PMID:21435586 NCBI chrNW_004624846:3,395,536...3,408,616
Ensembl chrNW_004624846:3,395,406...3,408,626 		JBrowse link
G Rtn4 reticulon 4 involved_in ISO (PMID:25917084) UniProt PMID:25917084 NCBI chrNW_004624833:6,514,409...6,584,061 JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:25238095)
(PMID:21045126), (PMID:21277849), (PMID:25238095)		 UniProt PMID:21045126 PMID:21277849 PMID:25238095 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
G Treml4 triggering receptor expressed on myeloid cells like 4 involved_in ISO (PMID:25848864) UniProt PMID:25848864 NCBI chrNW_004624754:17,600,341...17,608,766 JBrowse link
G Zdhhc3 zDHHC palmitoyltransferase 3 involved_in ISO (PMID:38169466) UniProt PMID:38169466 NCBI chrNW_004624730:75,561,842...75,597,867
Ensembl chrNW_004624730:75,561,812...75,599,152 		JBrowse link
positive regulation of toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdi1 GDP dissociation inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624946:902,831...908,815
Ensembl chrNW_004624946:902,461...909,613 		JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 involved_in ISO (PMID:11584270) UniProt PMID:11584270 NCBI chrNW_004624750:4,738,563...4,752,227
Ensembl chrNW_004624750:4,737,894...4,752,221 		JBrowse link
G Lrch4 leucine rich repeats and calponin homology domain containing 4 involved_in ISO (PMID:16449650) UniProt PMID:16449650 NCBI chrNW_004624740:16,491,804...16,503,682
Ensembl chrNW_004624740:16,491,837...16,503,491 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in ISO (PMID:20728433) UniProt PMID:20728433 NCBI chrNW_004624737:8,021,478...8,154,543
Ensembl chrNW_004624737:8,022,836...8,154,422 		JBrowse link
positive regulation of type I hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase ISO RGD PMID:22228807 RGD:11040701 NCBI chrNW_004624902:1,173,101...1,216,662
Ensembl chrNW_004624902:1,182,682...1,216,171 		JBrowse link
G Fcer1a Fc fragment of IgE receptor Ia acts_upstream_of_or_within ISO (PMID:8252632) MGI PMID:8252632 NCBI chrNW_004624794:2,003,031...2,008,930
Ensembl chrNW_004624794:2,002,928...2,008,940 		JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig acts_upstream_of_or_within ISO (PMID:14764707) MGI PMID:14764707 NCBI chrNW_004624794:168,564...172,433
Ensembl chrNW_004624794:168,564...172,034 		JBrowse link
positive regulation of type I interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fadd Fas associated via death domain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:17,050,929...17,059,648
Ensembl chrNW_004624767:17,055,509...17,059,705 		JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO (PMID:27129230)
(PMID:24882218)		 UniProt PMID:24882218 PMID:27129230 NCBI chrNW_004624807:4,913,734...4,934,096
Ensembl chrNW_004624807:4,913,742...4,933,267 		JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (PMID:17618271) MGI PMID:17618271 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G Irf7 interferon regulatory factor 7 acts_upstream_of_or_within ISO (PMID:17618271) MGI PMID:17618271 NCBI chrNW_004624766:21,850,211...21,853,189 JBrowse link
G Lsm14a LSM14A mRNA processing body assembly factor acts_upstream_of_or_within ISO (PMID:22745163) MGI PMID:22745163 NCBI chrNW_004624794:8,913,278...9,035,652 JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:16127453), (PMID:20451243) BHF-UCL PMID:16127453 PMID:20451243 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in ISO (PMID:24784232) CAFA PMID:24784232 NCBI chrNW_004624878:6,017...17,368
Ensembl chrNW_004624878:6,035...17,445 		JBrowse link
G Nlrc5 NLR family CARD domain containing 5 involved_in ISO (PMID:20061403) UniProt PMID:20061403 NCBI chrNW_004624746:28,954,009...29,030,337
Ensembl chrNW_004624746:28,954,016...29,030,322 		JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO (PMID:34160127) UniProt PMID:34160127 NCBI chrNW_004624761:26,429,130...26,588,563
Ensembl chrNW_004624761:26,513,759...26,588,950 		JBrowse link
G Rnf185 ring finger protein 185 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:7,642,198...7,693,944
Ensembl chrNW_004624747:7,641,916...7,694,033 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (PMID:23910378) ComplexPortal PMID:23910378 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:27129230) UniProt PMID:27129230 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Trim41 tripartite motif containing 41 involved_in ISO (PMID:29760876) UniProt PMID:29760876 NCBI chrNW_004624958:187,174...198,971
Ensembl chrNW_004624958:188,133...198,242 		JBrowse link
G Trim56 tripartite motif containing 56 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:16,154,441...16,163,057
Ensembl chrNW_004624740:16,159,874...16,162,090 		JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:24882218) UniProt PMID:24882218 NCBI chrNW_004624817:7,029,104...7,053,447
Ensembl chrNW_004624817:7,045,228...7,053,525 		JBrowse link
G Ube2k ubiquitin conjugating enzyme E2 K involved_in ISO (PMID:24882218) UniProt PMID:24882218 NCBI chrNW_004624761:27,205,034...27,277,016
Ensembl chrNW_004624761:27,205,034...27,276,884 		JBrowse link
G Usp27x ubiquitin specific peptidase 27 X-linked involved_in ISO (PMID:31534008) UniProt PMID:31534008 NCBI chrNW_004624893:1,314,670...1,329,823
Ensembl chrNW_004624893:1,314,670...1,329,853 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:19399181) BHF-UCL PMID:19399181 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288 		JBrowse link
G Zbp1 Z-DNA binding protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17618271) MGI
InterPro
TreeGrafter		 PMID:17618271 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624741:24,022,433...24,033,090 JBrowse link
positive regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:7,947,554...7,957,553
Ensembl chrNW_004624817:7,947,639...7,957,462 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:16888103) UniProt PMID:16888103 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO (PMID:18339625) MGI PMID:18339625 NCBI chrNW_004624795:3,572,025...3,605,675
Ensembl chrNW_004624795:3,572,266...3,607,126 		JBrowse link
G Nlrc5 NLR family CARD domain containing 5 involved_in ISO (PMID:20061403)
(PMID:20639463)		 UniProt
BHF-UCL		 PMID:20061403 PMID:20639463 NCBI chrNW_004624746:28,954,009...29,030,337
Ensembl chrNW_004624746:28,954,016...29,030,322 		JBrowse link
G Parp9 poly(ADP-ribose) polymerase family member 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624912:827,112...968,501
Ensembl chrNW_004624912:827,547...859,199 		JBrowse link
G Txk TXK tyrosine kinase involved_in ISO (PMID:11859127) UniProt PMID:11859127 NCBI chrNW_004624761:18,841,795...18,897,564
Ensembl chrNW_004624761:18,841,795...18,897,458 		JBrowse link
positive regulation of type IIa hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3 complement C3 acts_upstream_of_or_within ISO (PMID:11901193) MGI PMID:11901193 NCBI chrNW_004624828:3,773,816...3,798,077
Ensembl chrNW_004624828:3,770,221...3,797,946 		JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig acts_upstream_of_or_within ISO (PMID:11901193), (PMID:11911824)
(PMID:8976192)		 MGI PMID:8976192 PMID:11901193 PMID:11911824 NCBI chrNW_004624794:168,564...172,433
Ensembl chrNW_004624794:168,564...172,034 		JBrowse link
positive regulation of type III hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase ISO RGD PMID:22228807 RGD:11040701 NCBI chrNW_004624902:1,173,101...1,216,662
Ensembl chrNW_004624902:1,182,682...1,216,171 		JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig acts_upstream_of_or_within ISO (PMID:8976192) MGI PMID:8976192 NCBI chrNW_004624794:168,564...172,433
Ensembl chrNW_004624794:168,564...172,034 		JBrowse link
positive regulation of type IV hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zp3 zona pellucida glycoprotein 3 involved_in ISO (PMID:15579591) UniProt PMID:15579591 NCBI chrNW_004624740:15,037,818...15,044,207
Ensembl chrNW_004624740:15,037,943...15,044,193 		JBrowse link
positive regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr4 C-X-C motif chemokine receptor 4 ISO RGD PMID:24955809 RGD:11352686 NCBI chrNW_004624732:35,473,740...35,477,482
Ensembl chrNW_004624732:35,472,760...35,477,528 		JBrowse link
G Foxc2 forkhead box C2 involved_in ISO (PMID:18579532) BHF-UCL PMID:18579532 NCBI chrNW_004624746:2,632,547...2,634,867
Ensembl chrNW_004624746:2,632,619...2,634,085 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:30052311 RGD:155663378 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705 		JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in ISO (PMID:16774925) UniProt PMID:16774925 NCBI chrNW_004624850:4,510,700...4,658,579
Ensembl chrNW_004624850:4,510,598...4,661,056 		JBrowse link
G Vegfb vascular endothelial growth factor B involved_in ISO (PMID:16109918) UniProt PMID:16109918 NCBI chrNW_004624767:22,068,107...22,071,731
Ensembl chrNW_004624767:22,068,107...22,071,491 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:25656649) BHF-UCL PMID:25656649 NCBI chrNW_004624747:5,123,085...5,128,465 JBrowse link
positive regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin gamma 1 involved_in ISO (PMID:25705373) ARUK-UCL PMID:25705373 NCBI chrNW_004624801:10,496,876...10,499,737
Ensembl chrNW_004624801:10,496,718...10,499,637 		JBrowse link
G Adra2a adrenoceptor alpha 2A involved_in ISO (PMID:17655843) BHF-UCL PMID:17655843 NCBI chrNW_004624737:35,262,779...35,265,566
Ensembl chrNW_004624737:35,264,099...35,265,490 		JBrowse link
G Anxa1 annexin A1 involved_in ISO (PMID:25664854) UniProt PMID:25664854 NCBI chrNW_004624811:765,338...782,203
Ensembl chrNW_004624811:764,940...782,198 		JBrowse link
G Arfgef1 ARF guanine nucleotide exchange factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624744:24,010,609...24,144,474
Ensembl chrNW_004624744:24,011,136...24,143,202 		JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO (PMID:23389627) AgBase PMID:23389627 NCBI chrNW_004624885:1,314,885...1,362,730
Ensembl chrNW_004624885:1,311,512...1,362,730 		JBrowse link
G Ccn4 cellular communication network factor 4 involved_in ISO (PMID:29330021) UniProt PMID:29330021 NCBI chrNW_004624735:22,789,784...22,819,527
Ensembl chrNW_004624735:22,788,475...22,819,648 		JBrowse link
G Cldn1 claudin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:66,885,674...66,902,345
Ensembl chrNW_004624730:66,885,319...66,903,079 		JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:16103090) ARUK-UCL PMID:16103090 NCBI chrNW_004624740:14,065,172...14,066,432
Ensembl chrNW_004624740:14,065,478...14,066,137 		JBrowse link
G Cldn4 claudin 4 involved_in ISO (PMID:16103090) ARUK-UCL PMID:16103090 NCBI chrNW_004624740:14,033,848...14,035,854 JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO (PMID:24721111) ARUK-UCL PMID:24721111 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO RGD PMID:26674152 RGD:11554781 NCBI chrNW_004624826:1,225,217...1,255,889
Ensembl chrNW_004624826:1,173,621...1,249,692 		JBrowse link
G Dmtn dematin actin binding protein involved_in ISO (PMID:18505823) UniProt PMID:18505823 NCBI chrNW_004624758:17,640,938...17,672,709
Ensembl chrNW_004624758:17,655,803...17,671,666 		JBrowse link
G Duox1 dual oxidase 1 involved_in ISO (PMID:19339556) UniProt PMID:19339556 NCBI chrNW_004624731:14,080,670...14,107,532
Ensembl chrNW_004624731:14,081,245...14,107,104 		JBrowse link
G Duox2 dual oxidase 2 involved_in ISO (PMID:19339556) UniProt PMID:19339556 NCBI chrNW_004624731:14,121,855...14,139,344
Ensembl chrNW_004624731:14,122,608...14,138,121 		JBrowse link
G Hbegf heparin binding EGF like growth factor involved_in ISO (PMID:17655843) BHF-UCL PMID:17655843 NCBI chrNW_004624743:33,112,105...33,124,145
Ensembl chrNW_004624743:33,112,036...33,124,169 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:16365390) UniProt PMID:16365390 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:23027131) BHF-UCL PMID:23027131 NCBI chrNW_004624766:21,907,423...21,913,414
Ensembl chrNW_004624766:21,911,241...21,913,653 		JBrowse link
G Insl3 insulin like 3 involved_in ISO (PMID:23539510) CACAO PMID:23539510 NCBI chrNW_004624908:1,368,660...1,369,740 JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO (PMID:26763945) ARUK-UCL PMID:26763945 NCBI chrNW_004624805:8,748,848...8,800,259
Ensembl chrNW_004624805:8,765,949...8,802,149 		JBrowse link
G Kank1 KN motif and ankyrin repeat domains 1 involved_in ISO (PMID:22084092) UniProt PMID:22084092 NCBI chrNW_004624736:5,260,761...5,444,234
Ensembl chrNW_004624736:5,379,728...5,444,234 		JBrowse link
G Mylk myosin light chain kinase involved_in ISO (PMID:15825080) UniProt PMID:15825080 NCBI chrNW_004624912:1,952,053...2,213,196
Ensembl chrNW_004624912:1,953,838...2,172,561 		JBrowse link
G Ocln occludin involved_in ISO (PMID:20152177) ARUK-UCL PMID:20152177 NCBI chrNW_004624905:333,853...388,990
Ensembl chrNW_004624905:333,864...388,880 		JBrowse link
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:20537760 RGD:597621556 NCBI chrNW_004624919:1,766,533...1,800,130
Ensembl chrNW_004624919:1,766,149...1,803,097 		JBrowse link
G Prkce protein kinase C epsilon involved_in ISO (PMID:17603037) UniProt PMID:17603037 NCBI chrNW_004624738:27,118,764...27,630,733
Ensembl chrNW_004624738:27,118,145...27,627,606 		JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:16515909 RGD:10043388 NCBI chrNW_004624759:14,243,887...14,259,090
Ensembl chrNW_004624759:14,244,899...14,258,445 		JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO (PMID:26763945) ARUK-UCL PMID:26763945 NCBI chrNW_004624735:15,356,911...15,713,219
Ensembl chrNW_004624735:15,461,178...15,714,071 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20537760 RGD:597621556 NCBI chrNW_004624842:2,212,561...2,260,514
Ensembl chrNW_004624842:2,211,020...2,230,132 		JBrowse link
G Tmem97 transmembrane protein 97 involved_in ISO (PMID:34233061) UniProt PMID:34233061 NCBI chrNW_004624786:915,839...928,022
Ensembl chrNW_004624786:915,640...928,022 		JBrowse link
positive regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (PMID:21356350) ARUK-UCL PMID:21356350 NCBI chrNW_004624741:6,881,477...6,914,910
Ensembl chrNW_004624741:6,880,877...6,915,051 		JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:21356350) ARUK-UCL PMID:21356350 NCBI chrNW_004624731:16,168,179...16,247,747
Ensembl chrNW_004624731:16,168,207...16,246,778 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:27919618) BHF-UCL PMID:27919618 NCBI chrNW_004624818:1,570,155...1,698,264
Ensembl chrNW_004624818:1,570,276...1,698,259 		JBrowse link
G Rreb1 ras responsive element binding protein 1 involved_in ISO (PMID:18394891) UniProt PMID:18394891 NCBI chrNW_004624756:18,259,884...18,383,344
Ensembl chrNW_004624756:18,259,884...18,382,648 		JBrowse link
positive regulation of xenophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irgm immunity related GTPase M involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:7,997,803...8,044,758
Ensembl chrNW_004624760:7,998,107...8,032,972 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004624782:13,150,824...13,158,327
Ensembl chrNW_004624782:13,152,039...13,159,113 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004624739:285,791...339,752
Ensembl chrNW_004624739:285,689...341,956 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Optn optineurin involved_in ISO (PMID:21617041) ParkinsonsUK-UCL PMID:21617041 NCBI chrNW_004624805:5,683,095...5,717,558
Ensembl chrNW_004624805:5,683,021...5,721,336 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890 		JBrowse link
G Rnf31 ring finger protein 31 involved_in ISO (PMID:28481331) UniProt PMID:28481331 NCBI chrNW_004624820:8,376,530...8,388,596
Ensembl chrNW_004624820:8,375,871...8,388,569 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:21617041) ParkinsonsUK-UCL PMID:21617041 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
protection from natural killer cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap1 transporter 1, ATP binding cassette subfamily B member ISO RGD PMID:8120379 RGD:2312378 NCBI chrNW_004624754:23,815,464...23,822,480
Ensembl chrNW_004624754:23,815,915...23,822,827 		JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member ISO RGD PMID:8120379 RGD:2312378 NCBI chrNW_004624754:23,827,782...23,845,690
Ensembl chrNW_004624754:23,827,706...23,837,356 		JBrowse link
regulation of acute inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnase1 deoxyribonuclease 1 involved_in ISO (PMID:29191910) UniProt PMID:29191910 NCBI chrNW_004624824:1,429,078...1,446,881
Ensembl chrNW_004624824:1,443,451...1,446,881 		JBrowse link
G Dnase1l3 deoxyribonuclease 1L3 involved_in ISO (PMID:29191910) UniProt PMID:29191910 NCBI chrNW_004624821:845,631...871,156
Ensembl chrNW_004624821:849,434...871,609 		JBrowse link
G Ffar2 free fatty acid receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624794:8,140,629...8,155,313
Ensembl chrNW_004624794:8,140,629...8,155,258 		JBrowse link
G Rhbdd3 rhomboid domain containing 3 acts_upstream_of_or_within ISO (PMID:23610400) MGI PMID:23610400 NCBI chrNW_004624747:5,641,702...5,647,808
Ensembl chrNW_004624747:5,641,855...5,647,122 		JBrowse link
regulation of acute inflammatory response to antigenic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g2d phospholipase A2 group IID involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:5,224,071...5,229,603
Ensembl chrNW_004624764:5,224,018...5,229,609 		JBrowse link
regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Evpl envoplakin acts_upstream_of_or_within ISO (PMID:27427436) MGI PMID:27427436 NCBI chrNW_004624801:5,905,761...5,926,547
Ensembl chrNW_004624801:5,905,761...5,923,752 		JBrowse link
G Ivl involucrin acts_upstream_of_or_within ISO (PMID:27427436) MGI PMID:27427436 NCBI chrNW_004624885:375,035...375,967 JBrowse link
G Ppl periplakin acts_upstream_of_or_within ISO (PMID:27427436) MGI PMID:27427436 NCBI chrNW_004624824:2,720,444...2,765,937
Ensembl chrNW_004624824:2,721,336...2,765,811 		JBrowse link
regulation of antibody-dependent cellular cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcgr2a Fc fragment of IgG receptor IIa ISO RGD PMID:16482158 RGD:2293335 NCBI chrNW_004624826:23,930...34,735 JBrowse link
regulation of antimicrobial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata6 GATA binding protein 6 involved_in ISO (PMID:33082341) UniProt PMID:33082341 NCBI chrNW_004624770:9,772,818...9,799,837
Ensembl chrNW_004624770:9,772,818...9,798,259 		JBrowse link
G Ppp2r3c protein phosphatase 2 regulatory subunit B''gamma acts_upstream_of_or_within ISO (PMID:16129705) MGI PMID:16129705 NCBI chrNW_004624838:1,627,632...1,655,079
Ensembl chrNW_004624838:1,627,873...1,657,475 		JBrowse link
regulation of axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 ADAM metallopeptidase domain 17 acts_upstream_of_or_within ISO (PMID:26651291) MGI PMID:26651291 NCBI chrNW_004624969:212,089...254,532
Ensembl chrNW_004624969:212,321...253,328 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:24733831) MGI PMID:24733831 NCBI chrNW_004624765:20,766,368...20,951,560
Ensembl chrNW_004624765:20,773,885...20,951,736 		JBrowse link
G Klf4 KLF transcription factor 4 acts_upstream_of_or_within ISO (PMID:24129709) MGI PMID:24129709 NCBI chrNW_004624758:4,047,217...4,052,257
Ensembl chrNW_004624758:4,047,219...4,051,983 		JBrowse link
G Lrig2 leucine rich repeats and immunoglobulin like domains 2 acts_upstream_of_or_within ISO (PMID:26651291) MGI PMID:26651291 NCBI chrNW_004624772:8,809,226...8,873,614
Ensembl chrNW_004624772:8,809,443...8,868,282 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within ISO (PMID:24733831) MGI PMID:24733831 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531 		JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 acts_upstream_of_or_within ISO (PMID:24733831) MGI PMID:24733831 NCBI chrNW_004624828:5,489,085...5,511,166
Ensembl chrNW_004624828:5,488,814...5,511,445 		JBrowse link
G Neo1 neogenin 1 acts_upstream_of_or_within ISO (PMID:26651291) MGI PMID:26651291 NCBI chrNW_004624781:1,021,460...1,227,680
Ensembl chrNW_004624781:1,019,603...1,227,666 		JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:24733831) MGI PMID:24733831 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Ptprf protein tyrosine phosphatase receptor type F acts_upstream_of_or_within ISO (PMID:21976490) MGI PMID:21976490 NCBI chrNW_004624892:2,825,771...2,932,854 JBrowse link
G Stk24 serine/threonine kinase 24 involved_in ISO (PMID:19855390) UniProt PMID:19855390 NCBI chrNW_004624793:12,474,346...12,595,052
Ensembl chrNW_004624793:12,474,373...12,595,062 		JBrowse link
regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:34102106) UniProt PMID:34102106 NCBI chrNW_004624807:446,662...478,571
Ensembl chrNW_004624807:446,647...479,069 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624907:1,087,611...1,113,275
Ensembl chrNW_004624907:1,087,611...1,113,266 		JBrowse link
regulation of behavioral fear response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:24412220) ARUK-UCL PMID:24412220 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Ephb2 EPH receptor B2 ISO RGD PMID:26354908 RGD:127285622 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482 		JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:24831231 RGD:596948424 NCBI chrNW_004624741:28,504,814...28,543,592
Ensembl chrNW_004624741:28,505,037...28,544,122 		JBrowse link
G Rag1 recombination activating 1 ISO RGD PMID:22964459 RGD:12907572 NCBI chrNW_004624767:10,694,867...10,698,041
Ensembl chrNW_004624767:10,694,867...10,698,001 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (PMID:21423165) BHF-UCL PMID:21423165 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325 		JBrowse link
regulation of blood coagulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoh apolipoprotein H acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624870:2,082,050...2,096,220
Ensembl chrNW_004624870:2,081,968...2,099,517 		JBrowse link
G Cav1 caveolin 1 involved_in ISO (PMID:17848177) BHF-UCL PMID:17848177 NCBI chrNW_004624827:2,844,855...2,878,367
Ensembl chrNW_004624827:2,844,115...2,879,179 		JBrowse link
G Ephb2 EPH receptor B2 involved_in ISO (PMID:30213874) UniProt PMID:30213874 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482 		JBrowse link
G F11 coagulation factor XI acts_upstream_of_or_within ISO (PMID:16533887) MGI PMID:16533887 NCBI chrNW_004624769:17,093,643...17,115,716
Ensembl chrNW_004624769:17,094,169...17,115,222 		JBrowse link
G F2r coagulation factor II thrombin receptor involved_in ISO (PMID:17848177) BHF-UCL PMID:17848177 NCBI chrNW_004624869:1,181,288...1,200,751
Ensembl chrNW_004624869:1,181,354...1,200,664 		JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:17848177) BHF-UCL PMID:17848177 NCBI chrNW_004624869:1,326,605...1,337,195 JBrowse link
G Foxa2 forkhead box A2 involved_in ISO (PMID:12911579) UniProt PMID:12911579 NCBI chrNW_004624741:22,645,580...22,649,722
Ensembl chrNW_004624741:22,645,519...22,649,854 		JBrowse link
G Hrg histidine rich glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:70,070,302...70,086,256 JBrowse link
G Serpinc1 serpin family C member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624771:7,955,778...7,966,637
Ensembl chrNW_004624771:7,955,739...7,966,637 		JBrowse link
G Vkorc1 vitamin K epoxide reductase complex subunit 1 ISO RGD PMID:14765194 RGD:1303972 NCBI chrNW_004624782:14,141,545...14,144,181
Ensembl chrNW_004624782:14,141,545...14,144,177 		JBrowse link
regulation of cardiac muscle hypertrophy in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta ISO RGD PMID:31709908 RGD:329901803 NCBI chrNW_004624747:12,287,817...12,426,340
Ensembl chrNW_004624747:12,307,541...12,424,897 		JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:4,482,708...4,493,295
Ensembl chrNW_004624762:4,482,674...4,493,329 		JBrowse link
regulation of cellular hyperosmotic salinity response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efhd1 EF-hand domain family member D1 involved_in ISO (PMID:26975899) UniProt PMID:26975899 NCBI chrNW_004624843:5,346,767...5,377,596 JBrowse link
G Letm1 leucine zipper and EF-hand containing transmembrane protein 1 involved_in ISO (PMID:26975899) UniProt PMID:26975899 NCBI chrNW_004624755:25,604,636...25,631,974
Ensembl chrNW_004624755:25,604,454...25,631,716 		JBrowse link
G Micu1 mitochondrial calcium uptake 1 involved_in ISO (PMID:26975899) UniProt PMID:26975899 NCBI chrNW_004624754:6,165,561...6,367,789
Ensembl chrNW_004624754:6,164,683...6,368,125 		JBrowse link
G Slc25a23 solute carrier family 25 member 23 involved_in ISO (PMID:26975899) UniProt PMID:26975899 NCBI chrNW_004624828:3,558,034...3,572,426
Ensembl chrNW_004624828:3,559,813...3,572,395 		JBrowse link
regulation of cellular response to heat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chordc1 cysteine and histidine rich domain containing 1 involved_in ISO (PMID:20493909) UniProt PMID:20493909 NCBI chrNW_004624845:226,022...244,636
Ensembl chrNW_004624845:225,718...244,636 		JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:11583998) UniProt PMID:11583998 NCBI chrNW_004624735:12,536,818...12,562,643
Ensembl chrNW_004624735:12,537,128...12,562,644 		JBrowse link
G Mapt microtubule associated protein tau involved_in ISO (PMID:21131359) ParkinsonsUK-UCL PMID:21131359 NCBI chrNW_004624849:2,320,887...2,421,099 JBrowse link
regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:9,551,664...9,562,773
Ensembl chrNW_004624820:9,552,287...9,563,472 		JBrowse link
G Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 involved_in ISO (PMID:23303788) UniProt PMID:23303788 NCBI chrNW_004624740:8,279,416...8,283,730
Ensembl chrNW_004624740:8,278,078...8,283,657 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:18054269 RGD:9068899 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705 		JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:29353861) ARUK-UCL PMID:29353861 NCBI chrNW_004624865:4,461,200...4,591,309
Ensembl chrNW_004624865:4,461,215...4,588,836 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO RGD PMID:19450559 RGD:7242910 NCBI chrNW_004624795:1,648,235...1,680,788
Ensembl chrNW_004624795:1,648,080...1,681,200 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (PMID:22128162) UniProt PMID:22128162 NCBI chrNW_004624730:3,134,419...3,145,512
Ensembl chrNW_004624730:3,133,595...3,146,221 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:10205047) DisProt PMID:10205047 NCBI chrNW_004624731:5,350,912...5,359,286 JBrowse link
regulation of cellular response to osmotic stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624782:12,995,277...13,004,980
Ensembl chrNW_004624782:12,995,277...13,005,087 		JBrowse link
regulation of cellular response to oxidative stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:18344354), (PMID:25583114) UniProt PMID:18344354 PMID:25583114 NCBI chrNW_004624946:421,113...439,961
Ensembl chrNW_004624946:421,132...440,075 		JBrowse link
G Aifm2 AIF family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:4,276,579...4,301,058
Ensembl chrNW_004624754:4,276,928...4,301,365 		JBrowse link
G Alox5 arachidonate 5-lipoxygenase involved_in ISO (PMID:28694473) UniProt PMID:28694473 NCBI chrNW_004624966:168,244...220,430
Ensembl chrNW_004624966:168,250...220,522 		JBrowse link
G Fut8 fucosyltransferase 8 acts_upstream_of_or_within ISO (PMID:24619415) MGI PMID:24619415 NCBI chrNW_004624734:35,257,666...35,617,275
Ensembl chrNW_004624734:35,264,019...35,458,277 		JBrowse link
G Mapkap1 MAPK associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:9,588,021...9,828,045
Ensembl chrNW_004624760:9,587,926...9,829,680 		JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:23994610) MGI PMID:23994610 NCBI chrNW_004624827:2,589,157...2,724,065
Ensembl chrNW_004624827:2,587,966...2,723,995 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (PMID:34299054) DisProt PMID:34299054 NCBI chrNW_004624787:14,355,330...14,381,353
Ensembl chrNW_004624787:14,355,791...14,381,251 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:24446486) ParkinsonsUK-UCL PMID:24446486 NCBI chrNW_004624764:5,656,207...5,671,260
Ensembl chrNW_004624764:5,656,229...5,671,260 		JBrowse link
G Pnpla8 patatin like domain 8, phospholipase A2 involved_in ISO (PMID:28442572) UniProt PMID:28442572 NCBI chrNW_004624739:21,252,812...21,305,118
Ensembl chrNW_004624739:21,260,117...21,289,195 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:24446486)
(PMID:22314364)		 ParkinsonsUK-UCL PMID:22314364 PMID:24446486 NCBI chrNW_004624855:430,148...1,992,121
Ensembl chrNW_004624855:430,260...1,989,747 		JBrowse link
G Slc25a14 solute carrier family 25 member 14 involved_in ISO (PMID:20600837)
(PMID:11701769)		 UniProt PMID:11701769 PMID:20600837 NCBI chrNW_004624797:9,609,539...9,654,583
Ensembl chrNW_004624797:9,610,299...9,654,174 		JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:16037214) MGI PMID:16037214 NCBI chrNW_004624777:18,540,006...18,619,881
Ensembl chrNW_004624777:18,546,799...18,619,947 		JBrowse link
regulation of cellular response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy8 adenylate cyclase 8 involved_in ISO (PMID:12206999), (PMID:27234425) UniProt PMID:12206999 PMID:27234425 NCBI chrNW_004624735:24,891,803...25,149,817
Ensembl chrNW_004624735:24,891,583...25,149,900 		JBrowse link
G Coro2b coronin 2B acts_upstream_of_or_within ISO (PMID:29162887) MGI PMID:29162887 NCBI chrNW_004624781:4,507,916...4,617,274
Ensembl chrNW_004624781:4,507,601...4,601,359 		JBrowse link
G Crhbp corticotropin releasing hormone binding protein involved_in ISO (PMID:21039637) UniProt PMID:21039637 NCBI chrNW_004624869:1,412,541...1,423,891
Ensembl chrNW_004624869:1,412,499...1,423,932 		JBrowse link
G Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 involved_in ISO (PMID:23415227) UniProt PMID:23415227 NCBI chrNW_004624807:4,800,801...4,815,779
Ensembl chrNW_004624807:4,797,401...4,809,444 		JBrowse link
G Hapstr1 HUWE1 associated protein modifying stress responses involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:6,452,551...6,481,081
Ensembl chrNW_004624824:6,452,880...6,482,833 		JBrowse link
G Oprm1 opioid receptor mu 1 involved_in ISO (PMID:21039637) UniProt PMID:21039637 NCBI chrNW_004624785:4,147,079...4,195,712
Ensembl chrNW_004624785:4,032,689...4,196,186 		JBrowse link
G Slc38a2 solute carrier family 38 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624816:5,888,447...5,902,009
Ensembl chrNW_004624816:5,888,414...5,902,897 		JBrowse link
G Sncg synuclein gamma ISO RGD PMID:18936092 RGD:13782255 NCBI chrNW_004624841:192,396...196,568
Ensembl chrNW_004624841:192,398...196,064 		JBrowse link
regulation of complement activation, alternative pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfh complement factor H involved_in ISO (PMID:20378178), (PMID:28671664) ComplexPortal PMID:20378178 PMID:28671664 NCBI chrNW_004624798:3,332,549...3,414,435 JBrowse link
regulation of defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp1 forkhead box P1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624773:5,543,529...6,076,522
Ensembl chrNW_004624773:5,543,536...5,883,131 		JBrowse link
G Syt11 synaptotagmin 11 involved_in ISO (PMID:23303671) ParkinsonsUK-UCL PMID:23303671 NCBI chrNW_004624885:1,246,768...1,266,418
Ensembl chrNW_004624885:1,246,719...1,266,420 		JBrowse link
regulation of defense response to virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd37 CD37 molecule acts_upstream_of_or_within ISO (PMID:20709950) MGI PMID:20709950 NCBI chrNW_004624832:4,837,247...4,842,126
Ensembl chrNW_004624832:4,837,247...4,841,756 		JBrowse link
G Elmod2 ELMO domain containing 2 involved_in ISO (PMID:17452337) UniProt PMID:17452337 NCBI chrNW_004625006:123,036...144,876
Ensembl chrNW_004625006:123,502...147,483 		JBrowse link
G Herc5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 involved_in ISO (PMID:20308324) UniProt PMID:20308324 NCBI chrNW_004624757:16,108,509...16,151,654
Ensembl chrNW_004624757:16,028,668...16,152,628 		JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO (PMID:7566153) MGI PMID:7566153 NCBI chrNW_004624782:13,471,083...13,483,712 JBrowse link
G Traf3 TNF receptor associated factor 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624734:1,728,353...1,820,345
Ensembl chrNW_004624734:1,728,255...1,786,010 		JBrowse link
G Tspan32 tetraspanin 32 acts_upstream_of_or_within ISO (PMID:20709950) MGI PMID:20709950 NCBI chrNW_004624767:15,107,448...15,160,379
Ensembl chrNW_004624767:15,143,732...15,157,206 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (PMID:28246125) MGI PMID:28246125 NCBI chrNW_004624764:22,723,643...22,777,517
Ensembl chrNW_004624764:22,723,291...22,778,761 		JBrowse link
regulation of defense response to virus by host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:28636595) UniProt PMID:28636595 NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075 		JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:24784232) CAFA PMID:24784232 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534 		JBrowse link
G Ifnlr1 interferon lambda receptor 1 involved_in ISO (PMID:12469119) UniProt PMID:12469119 NCBI chrNW_004624764:8,637,741...8,660,982
Ensembl chrNW_004624764:8,637,359...8,647,443 		JBrowse link
G Il15 interleukin 15 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624853:1,059,625...1,144,799
Ensembl chrNW_004624853:1,128,519...1,144,941 		JBrowse link
G Il1b interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760 		JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in ISO (PMID:24784232) CAFA PMID:24784232 NCBI chrNW_004624878:6,017...17,368
Ensembl chrNW_004624878:6,035...17,445 		JBrowse link
G Rnf216 ring finger protein 216 involved_in ISO (PMID:19893624) UniProt PMID:19893624 NCBI chrNW_004624740:27,861,094...28,024,619
Ensembl chrNW_004624740:27,885,778...28,024,710 		JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 ISO RGD PMID:12215647 RGD:634516 NCBI chrNW_004624765:19,441,299...19,509,468
Ensembl chrNW_004624765:19,439,923...19,509,186 		JBrowse link
regulation of DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (PMID:24489120) UniProt PMID:24489120 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Cul4a cullin 4A acts_upstream_of_or_within ISO (PMID:19481525) MGI PMID:19481525 NCBI chrNW_004624793:686,720...722,516
Ensembl chrNW_004624793:688,135...722,490 		JBrowse link
G Etaa1 ETAA1 activator of ATR kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:5,916,038...5,923,783 JBrowse link
G Fbxo4 F-box protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:13,019,929...13,047,744
Ensembl chrNW_004624759:13,017,815...13,046,883 		JBrowse link
G Fem1b fem-1 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:4,814,030...4,827,274
Ensembl chrNW_004624781:4,817,090...4,827,837 		JBrowse link
G LOC101724758 ewing's tumor-associated antigen 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624821:9,014,746...9,017,356 JBrowse link
G Nek1 NIMA related kinase 1 involved_in ISO (PMID:18843199) CACAO PMID:18843199 NCBI chrNW_004624769:945,788...1,146,921
Ensembl chrNW_004624769:945,644...1,147,246 		JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:21504906) UniProt PMID:21504906 NCBI chrNW_004624746:12,217,287...12,252,183
Ensembl chrNW_004624746:12,225,293...12,253,246 		JBrowse link
G Rnaseh2b ribonuclease H2 subunit B acts_upstream_of_or_within ISO (PMID:22802351) MGI PMID:22802351 NCBI chrNW_004624748:3,246,707...3,339,443 JBrowse link
G Rpa2 replication protein A2 involved_in ISO (PMID:21504906) UniProt PMID:21504906 NCBI chrNW_004624764:11,737,234...11,763,862
Ensembl chrNW_004624764:11,736,129...11,764,080 		JBrowse link
G Wdr76 WD repeat domain 76 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624804:10,844,275...10,947,234
Ensembl chrNW_004624804:10,846,384...10,907,017 		JBrowse link
regulation of DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cops3 COP9 signalosome subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624849:4,125,188...4,150,933
Ensembl chrNW_004624849:4,124,586...4,150,933 		JBrowse link
G Kmt5a lysine methyltransferase 5A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:23,289,118...23,309,465
Ensembl chrNW_004624747:23,289,119...23,308,682 		JBrowse link
G Npm1 nucleophosmin 1 acts_upstream_of_or_within ISO (PMID:16199867) MGI PMID:16199867 NCBI chrNW_004624733:18,645,269...18,655,073 JBrowse link
G Smyd2 SET and MYND domain containing 2 involved_in ISO (PMID:17108971) UniProt PMID:17108971 NCBI chrNW_004624771:19,441,452...19,485,897
Ensembl chrNW_004624771:19,441,456...19,487,793 		JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (PMID:19234109) GO_Central PMID:19234109 NCBI chrNW_004624756:5,128,848...5,156,174 JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:21522133) MGI PMID:21522133 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (PMID:21522133)
(PMID:16079796)		 MGI PMID:16079796 PMID:21522133 NCBI chrNW_004624764:22,723,643...22,777,517
Ensembl chrNW_004624764:22,723,291...22,778,761 		JBrowse link
regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:57,305,105...57,337,653
Ensembl chrNW_004624730:57,305,053...57,337,797 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624842:910,178...933,495
Ensembl chrNW_004624842:912,336...933,573 		JBrowse link
G Actr8 actin related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624822:3,319,694...3,335,359
Ensembl chrNW_004624822:3,319,439...3,335,360 		JBrowse link
G Cdk9 cyclin dependent kinase 9 involved_in ISO (PMID:20493174) UniProt PMID:20493174 NCBI chrNW_004624760:7,760,474...7,765,711 JBrowse link
G CUNH11orf54 chromosome unknown C11orf54 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624735:38,407,335...38,427,688
Ensembl chrNW_004624735:38,411,829...38,422,981 		JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO (PMID:20467439) MGI PMID:20467439 NCBI chrNW_004624754:24,991,650...24,992,645
Ensembl chrNW_004624754:24,991,690...24,992,643 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624804:8,223,626...8,353,339
Ensembl chrNW_004624804:8,223,550...8,321,756 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624749:29,048,492...29,051,459 JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624779:9,843,068...9,861,959
Ensembl chrNW_004624779:9,843,065...9,862,137 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624765:10,040,259...10,127,449
Ensembl chrNW_004624765:10,057,460...10,116,802 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624816:2,673,058...2,683,306 JBrowse link
G Nfrkb nuclear factor related to kappaB binding protein involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624812:4,248,077...4,282,948
Ensembl chrNW_004624812:4,249,350...4,280,182 		JBrowse link
G Parg poly(ADP-ribose) glycohydrolase involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624928:54,610...188,948
Ensembl chrNW_004624928:54,874...186,353 		JBrowse link
G Riox1 ribosomal oxygenase 1 involved_in ISO (PMID:35210392) UniProt PMID:35210392 NCBI chrNW_004624734:27,958,942...27,961,917 JBrowse link
G Ruvbl1 RuvB like AAA ATPase 1 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624961:427,836...460,887 JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624832:5,014,484...5,028,868
Ensembl chrNW_004624832:5,014,484...5,028,885 		JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase involved_in ISO (PMID:35210392) UniProt PMID:35210392 NCBI chrNW_004624777:19,764,383...19,812,804
Ensembl chrNW_004624777:19,768,698...19,814,506 		JBrowse link
G Sgf29 SAGA complex associated factor 29 involved_in ISO (PMID:35210392) UniProt PMID:35210392 NCBI chrNW_004624782:13,054,643...13,076,640
Ensembl chrNW_004624782:13,054,343...13,072,515 		JBrowse link
G Sirt7 sirtuin 7 involved_in ISO (PMID:30944854) UniProt PMID:30944854 NCBI chrNW_004624801:10,753,480...10,760,601
Ensembl chrNW_004624801:10,753,333...10,764,122 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:23695662) MGI PMID:23695662 NCBI chrNW_004624893:499,222...512,341
Ensembl chrNW_004624893:498,973...512,443 		JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624832:2,455,643...2,459,379
Ensembl chrNW_004624832:2,455,422...2,459,367 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624814:529,100...568,387
Ensembl chrNW_004624814:529,084...567,666 		JBrowse link
G Usp1 ubiquitin specific peptidase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624742:31,390,279...31,399,789
Ensembl chrNW_004624742:31,391,022...31,399,724 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:23979016) ComplexPortal PMID:23979016 NCBI chrNW_004624734:3,846,753...3,875,294
Ensembl chrNW_004624734:3,846,765...3,875,294 		JBrowse link
regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dek DEK proto-oncogene acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21653549) MGI
TreeGrafter		 PMID:21653549 GO_REF:0000118 NCBI chrNW_004624756:8,421,492...8,447,452
Ensembl chrNW_004624756:8,421,782...8,447,452 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:21639834) UniProt PMID:21639834 NCBI chrNW_004624781:464,858...498,146
Ensembl chrNW_004624781:464,658...497,775 		JBrowse link
G Ppp4c protein phosphatase 4 catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624782:13,174,585...13,181,055
Ensembl chrNW_004624782:13,174,376...13,180,995 		JBrowse link
G Ppp4r2 protein phosphatase 4 regulatory subunit 2 involved_in ISO (PMID:18614045) ComplexPortal PMID:18614045 NCBI chrNW_004624773:7,501,184...7,562,428
Ensembl chrNW_004624773:7,501,287...7,560,597 		JBrowse link
G Ppp4r3b protein phosphatase 4 regulatory subunit 3B involved_in ISO (PMID:18614045) ComplexPortal PMID:18614045 NCBI chrNW_004624833:5,936,196...6,009,565 JBrowse link
regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 involved_in ISO (PMID:15665856) UniProt PMID:15665856 NCBI chrNW_004624927:1,609,404...1,643,409
Ensembl chrNW_004624927:1,610,878...1,643,409 		JBrowse link
G Fignl1 fidgetin like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:3,737,482...3,748,851
Ensembl chrNW_004624740:3,739,765...3,741,858 		JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) MGI PMID:24217620 NCBI chrNW_004624764:7,664,550...7,742,494 JBrowse link
G Ppp4c protein phosphatase 4 catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624782:13,174,585...13,181,055
Ensembl chrNW_004624782:13,174,376...13,180,995 		JBrowse link
G Ppp4r2 protein phosphatase 4 regulatory subunit 2 involved_in ISO (PMID:20154705) UniProt PMID:20154705 NCBI chrNW_004624773:7,501,184...7,562,428
Ensembl chrNW_004624773:7,501,287...7,560,597 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chrNW_004624804:7,957,175...7,983,078
Ensembl chrNW_004624804:7,957,253...7,983,619 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chrNW_004624860:1,627,606...1,643,569
Ensembl chrNW_004624860:1,627,765...1,643,667 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO (PMID:20154705) UniProt PMID:20154705 NCBI chrNW_004624764:11,737,234...11,763,862
Ensembl chrNW_004624764:11,736,129...11,764,080 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IEA TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624741:29,303,844...29,344,123
Ensembl chrNW_004624741:29,304,427...29,343,842 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (PMID:24843002) UniProt PMID:24843002 NCBI chrNW_004624730:74,187,981...74,277,857
Ensembl chrNW_004624730:74,187,995...74,277,200 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624841:21,077...133,155
Ensembl chrNW_004624841:20,431...133,163 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:19135889), (PMID:22753495) UniProt PMID:19135889 PMID:22753495 NCBI chrNW_004624828:5,441,973...5,449,549
Ensembl chrNW_004624828:5,442,057...5,451,520 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chrNW_004624735:7,724,048...8,172,725 JBrowse link
G Terf2ip TERF2 interacting protein involved_in ISO (PMID:20339076) UniProt PMID:20339076 NCBI chrNW_004624746:11,327,473...11,337,489
Ensembl chrNW_004624746:11,327,467...11,337,496 		JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18283110) InterPro
TreeGrafter
MGI		 PMID:18283110 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624780:13,198,569...13,297,189
Ensembl chrNW_004624780:13,198,592...13,298,703 		JBrowse link
G Znf365 zinc finger protein 365 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624791:1,330,869...1,355,248
Ensembl chrNW_004624791:1,330,794...1,470,973 		JBrowse link
regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 NOT|involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chrNW_004624762:8,282,415...8,339,818
Ensembl chrNW_004624762:8,281,433...8,339,830 		JBrowse link
G Dek DEK proto-oncogene acts_upstream_of_or_within ISO (PMID:21653549) MGI PMID:21653549 NCBI chrNW_004624756:8,421,492...8,447,452
Ensembl chrNW_004624756:8,421,782...8,447,452 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) UniProt PMID:27568553 NCBI chrNW_004624733:42,699,950...42,718,623 JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within ISO (PMID:23241889) MGI PMID:23241889 NCBI chrNW_004624755:25,510,329...25,588,540
Ensembl chrNW_004624755:25,509,301...25,588,204 		JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO (PMID:29227966) CACAO PMID:29227966 NCBI chrNW_004624783:11,138,222...11,223,329
Ensembl chrNW_004624783:11,138,303...11,223,044 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624741:6,630,746...6,766,314
Ensembl chrNW_004624741:6,638,889...6,721,118 		JBrowse link
G Was WASP actin nucleation promoting factor NOT|involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chrNW_004624893:453,793...493,696
Ensembl chrNW_004624893:487,396...493,482 		JBrowse link
regulation of eIF2 alpha phosphorylation by dsRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npm1 nucleophosmin 1 involved_in ISO (PMID:12882984) UniProt PMID:12882984 NCBI chrNW_004624733:18,645,269...18,655,073 JBrowse link
regulation of eIF2 alpha phosphorylation by heme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 acts_upstream_of_or_within ISO (PMID:15931390) MGI PMID:15931390 NCBI chrNW_004624740:31,223,583...31,306,749
Ensembl chrNW_004624740:31,274,483...31,306,430 		JBrowse link
G Fech ferrochelatase acts_upstream_of_or_within ISO (PMID:15931390) MGI PMID:15931390 NCBI chrNW_004624792:3,067,270...3,101,698
Ensembl chrNW_004624792:3,064,841...3,102,345 		JBrowse link
regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (PMID:11106749) UniProt PMID:11106749 NCBI chrNW_004624749:15,867,444...15,950,757
Ensembl chrNW_004624749:15,869,569...15,950,757 		JBrowse link
regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (PMID:23000344) ParkinsonsUK-UCL PMID:23000344 NCBI chrNW_004624749:15,867,444...15,950,757
Ensembl chrNW_004624749:15,869,569...15,950,757 		JBrowse link
G Erp29 endoplasmic reticulum protein 29 involved_in ISO (PMID:24370996) ParkinsonsUK-UCL PMID:24370996 NCBI chrNW_004624747:20,167,197...20,174,914
Ensembl chrNW_004624747:20,166,371...20,175,012 		JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:29,069,995...29,081,085
Ensembl chrNW_004624746:29,068,350...29,081,085 		JBrowse link
regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO (PMID:23921129) ARUK-UCL PMID:23921129 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb involved_in ISO PMID:23921129
(PMID:23921129)		 ARUK-UCL PMID:23921129 RGD:12910988 NCBI chrNW_004624826:97,605...112,101 JBrowse link
regulation of endoplasmic reticulum unfolded protein response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pigbos1 PIGB opposite strand 1 involved_in ISO (PMID:31653868) UniProt PMID:31653868 NCBI chrNW_004624731:6,304,962...6,307,303 JBrowse link
regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624746:29,069,995...29,081,085
Ensembl chrNW_004624746:29,068,350...29,081,085 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (PMID:25088257) ParkinsonsUK-UCL PMID:25088257 NCBI chrNW_004624730:3,134,419...3,145,512
Ensembl chrNW_004624730:3,133,595...3,146,221 		JBrowse link
regulation of fever generation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednrb endothelin receptor type B ISO RGD PMID:16123229 RGD:1581859 NCBI chrNW_004624751:22,459,613...22,491,409
Ensembl chrNW_004624751:22,459,584...22,491,606 		JBrowse link
G Ptges prostaglandin E synthase involved_in ISO (PMID:14566340) UniProt PMID:14566340 NCBI chrNW_004624760:5,643,549...5,653,747
Ensembl chrNW_004624760:5,643,501...5,654,475 		JBrowse link
regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoh apolipoprotein H involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624870:2,082,050...2,096,220
Ensembl chrNW_004624870:2,081,968...2,099,517 		JBrowse link
regulation of histamine secretion by mast cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snx6 sorting nexin 6 NOT|involved_in ISO (PMID:18253931) UniProt PMID:18253931 NCBI chrNW_004624838:2,105,558...2,146,064
Ensembl chrNW_004624838:2,105,619...2,145,268 		JBrowse link
G Vamp2 vesicle associated membrane protein 2 NOT|involved_in ISO (PMID:18253931) UniProt PMID:18253931 NCBI chrNW_004624786:10,723,791...10,727,654
Ensembl chrNW_004624786:10,724,964...10,727,649 		JBrowse link
G Vamp3 vesicle associated membrane protein 3 NOT|involved_in ISO (PMID:18253931) UniProt PMID:18253931 NCBI chrNW_004624818:4,010,130...4,019,695
Ensembl chrNW_004624818:4,009,991...4,019,728 		JBrowse link
regulation of inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd12 abhydrolase domain containing 12, lysophospholipase involved_in ISO (PMID:30643283) UniProt PMID:30643283 NCBI chrNW_004624939:212,910...272,112
Ensembl chrNW_004624939:213,007...273,786 		JBrowse link
G Ace2 angiotensin converting enzyme 2 involved_in ISO (PMID:17906677) BHF-UCL PMID:17906677 NCBI chrNW_004624829:344,823...391,451
Ensembl chrNW_004624829:344,933...391,527 		JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in ISO (PMID:23019333) BHF-UCL PMID:23019333 NCBI chrNW_004624759:20,749,548...21,092,816
Ensembl chrNW_004624759:20,898,761...21,088,838 		JBrowse link
G Ager advanced glycosylation end-product specific receptor involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624754:24,138,086...24,140,900 JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within ISO (PMID:19404405) MGI PMID:19404405 NCBI chrNW_004624775:18,846,222...18,856,093
Ensembl chrNW_004624775:18,849,118...18,855,577 		JBrowse link
G Ahsg alpha 2-HS glycoprotein involved_in ISO (PMID:12642050) UniProt PMID:12642050 NCBI chrNW_004624730:70,149,461...70,156,058
Ensembl chrNW_004624730:70,149,850...70,156,039 		JBrowse link
G Akna AT-hook transcription factor involved_in ISO (PMID:21606955) UniProt PMID:21606955 NCBI chrNW_004624760:20,791,147...20,840,476
Ensembl chrNW_004624760:20,804,512...20,839,654 		JBrowse link
G Alox5 arachidonate 5-lipoxygenase involved_in ISO (PMID:17114001)
(PMID:28694473), (PMID:7809134), (PMID:7969451)		 UniProt PMID:7809134 PMID:7969451 PMID:17114001 PMID:28694473 NCBI chrNW_004624966:168,244...220,430
Ensembl chrNW_004624966:168,250...220,522 		JBrowse link
G Anxa1 annexin A1 involved_in ISO (PMID:12475898) UniProt PMID:12475898 NCBI chrNW_004624811:765,338...782,203
Ensembl chrNW_004624811:764,940...782,198 		JBrowse link
G Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 involved_in ISO (PMID:31578312) UniProt PMID:31578312 NCBI chrNW_004624734:26,960,511...27,014,369
Ensembl chrNW_004624734:26,960,548...27,009,771 		JBrowse link
G Armh4 armadillo like helical domain containing 4 involved_in ISO (PMID:36649229) UniProt PMID:36649229 NCBI chrNW_004624884:3,027,799...3,225,859
Ensembl chrNW_004624884:3,034,414...3,223,161 		JBrowse link
G Bap1 BRCA1 associated deubiquitinase 1 acts_upstream_of_or_within ISO (PMID:26119930) MGI PMID:26119930 NCBI chrNW_004624822:4,809,489...4,818,514
Ensembl chrNW_004624822:4,809,405...4,818,515 		JBrowse link
G Bcl6 BCL6 transcription repressor acts_upstream_of_or_within ISO (PMID:9110977) MGI PMID:9110977 NCBI chrNW_004624730:69,145,035...69,167,583
Ensembl chrNW_004624730:69,154,080...69,167,689 		JBrowse link
G Brd4 bromodomain containing 4 involved_in ISO (PMID:19103749) UniProt PMID:19103749 NCBI chrNW_004624901:2,348,218...2,434,429
Ensembl chrNW_004624901:2,346,734...2,380,852 		JBrowse link
G Bst1 bone marrow stromal cell antigen 1 involved_in ISO (PMID:15328157) ParkinsonsUK-UCL PMID:15328157 NCBI chrNW_004624755:16,123,705...16,161,814
Ensembl chrNW_004624755:16,134,640...16,150,816 		JBrowse link
G Casp4 caspase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624918:145,661...187,006 JBrowse link
G Caspase-12 caspase-12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624918:229,995...246,393
Ensembl chrNW_004624918:229,926...250,816 		JBrowse link
G Celf1 CUGBP Elav-like family member 1 acts_upstream_of_or_within ISO (PMID:27230130) ARUK-UCL PMID:27230130 NCBI chrNW_004624767:1,263,231...1,344,896 JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624768:908,907...1,024,953
Ensembl chrNW_004624768:909,099...1,024,902 		JBrowse link
G Cma1 chymase 1 involved_in ISO (PMID:1919436) BHF-UCL PMID:1919436 NCBI chrNW_004624820:8,021,965...8,024,763
Ensembl chrNW_004624820:8,021,959...8,024,851 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in ISO (PMID:27591049) UniProt PMID:27591049 NCBI chrNW_004624757:5,895,912...5,953,485 JBrowse link
G Daglb diacylglycerol lipase beta involved_in ISO (PMID:23103940) UniProt PMID:23103940 NCBI chrNW_004624740:30,880,252...30,912,257
Ensembl chrNW_004624740:30,880,253...30,909,448 		JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:18725527) MGI PMID:18725527 NCBI chrNW_004624734:7,604,049...7,681,481
Ensembl chrNW_004624734:7,608,273...7,651,819 		JBrowse link
G Drosha drosha ribonuclease III acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:22,949,225...23,082,263
Ensembl chrNW_004624759:22,949,150...23,082,487 		JBrowse link
G Duoxa1 dual oxidase maturation factor 1 acts_upstream_of_or_within ISO (PMID:23770197) MGI PMID:23770197 NCBI chrNW_004624731:14,109,253...14,118,106
Ensembl chrNW_004624731:14,108,924...14,118,239 		JBrowse link
G Duoxa2 dual oxidase maturation factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:14,118,526...14,121,811
Ensembl chrNW_004624731:14,118,426...14,121,928 		JBrowse link
G Esr1 estrogen receptor 1 acts_upstream_of_or_within ISO (PMID:22659029) MGI PMID:22659029 NCBI chrNW_004624785:6,164,507...6,601,302
Ensembl chrNW_004624785:6,164,379...6,601,326 		JBrowse link
G Fanca FA complementation group A acts_upstream_of_or_within ISO (PMID:24501220) MGI PMID:24501220 NCBI chrNW_004624746:206,069...253,473
Ensembl chrNW_004624746:215,193...252,569 		JBrowse link
G Fancd2 FA complementation group D2 acts_upstream_of_or_within ISO (PMID:24501220) MGI PMID:24501220 NCBI chrNW_004624731:4,577,663...4,671,086
Ensembl chrNW_004624731:4,611,963...4,671,765 		JBrowse link
G Fbxl2 F-box and leucine rich repeat protein 2 involved_in ISO (PMID:23542741) UniProt PMID:23542741 NCBI chrNW_004624788:11,253,912...11,350,045
Ensembl chrNW_004624788:11,253,934...11,349,137 		JBrowse link
G Foxp1 forkhead box P1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624773:5,543,529...6,076,522
Ensembl chrNW_004624773:5,543,536...5,883,131 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:10,030,034...10,048,554 JBrowse link
G Gpsm3 G protein signaling modulator 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624754:24,130,303...24,132,332
Ensembl chrNW_004624754:24,129,812...24,132,333 		JBrowse link
G Il1r1 interleukin 1 receptor type 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22297845) MGI
TreeGrafter		 PMID:22297845 GO_REF:0000118 NCBI chrNW_004624749:6,661,142...6,737,988
Ensembl chrNW_004624749:6,708,522...6,739,871 		JBrowse link
G Il1rl2 interleukin 1 receptor like 2 acts_upstream_of_or_within
involved_in		 IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624749:6,747,131...6,781,908
Ensembl chrNW_004624749:6,749,007...6,779,753 		JBrowse link
G Il37 interleukin 37 acts_upstream_of_or_within ISO (PMID:30362558) ARUK-UCL PMID:30362558 NCBI chrNW_004624749:12,959,310...12,969,180 JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (PMID:28069950) MGI PMID:28069950 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G Jak2 Janus kinase 2 involved_in ISO (PMID:10925297) BHF-UCL PMID:10925297 NCBI chrNW_004624736:9,724,876...9,827,364
Ensembl chrNW_004624736:9,724,369...9,830,365 		JBrowse link
G Lacc1 laccase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624748:11,150,678...11,194,794
Ensembl chrNW_004624748:11,187,316...11,194,841 		JBrowse link
G Letmd1 LETM1 domain containing 1 involved_in ISO (PMID:31980577) UniProt PMID:31980577 NCBI chrNW_004624816:1,148,634...1,170,981
Ensembl chrNW_004624816:1,158,662...1,170,988 		JBrowse link
G LOC101719127 NACHT, LRR and PYD domains-containing protein 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:1,645,916...1,672,519
Ensembl chrNW_004624832:1,645,780...1,666,040 		JBrowse link
G LOC101725179 caspase-1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624918:113,326...135,812 JBrowse link
G Lrrc19 leucine rich repeat containing 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:31,208,583...31,218,754
Ensembl chrNW_004624736:31,206,168...31,218,754 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624886:4,029,318...4,168,797
Ensembl chrNW_004624886:4,027,178...4,168,902 		JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624855:2,968,111...3,008,728
Ensembl chrNW_004624855:2,969,444...2,970,421 		JBrowse link
G Mcph1 microcephalin 1 acts_upstream_of_or_within ISO (PMID:23516444) MGI PMID:23516444 NCBI chrNW_004624861:4,373,743...4,556,933 JBrowse link
G Mgll monoglyceride lipase involved_in ISO (PMID:17700715) UniProt PMID:17700715 NCBI chrNW_004624974:85,513...169,904
Ensembl chrNW_004624974:87,600...170,228 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (PMID:18203139) BHF-UCL PMID:18203139 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within ISO (PMID:29149604), (PMID:29400713) MGI PMID:29149604 PMID:29400713 NCBI chrNW_004624795:4,652,221...4,663,341
Ensembl chrNW_004624795:4,652,637...4,662,454 		JBrowse link
G Nlrp10 NLR family pyrin domain containing 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:172,727...177,029 JBrowse link
G Nlrp14 NLR family pyrin domain containing 14 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624817:8,804,708...8,832,251
Ensembl chrNW_004624817:8,804,529...8,832,874 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22297845) MGI
TreeGrafter		 PMID:22297845 GO_REF:0000118 NCBI chrNW_004624937:564,191...584,470 JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23696660) MGI
TreeGrafter		 PMID:23696660 GO_REF:0000118 NCBI chrNW_004624766:22,143,405...22,150,903 JBrowse link
G Nlrp8 NLR family pyrin domain containing 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:1,614,242...1,627,914 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:11385577)
(PMID:19218085)		 BHF-UCL
MGI		 PMID:11385577 PMID:19218085 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:19276172) UniProt PMID:19276172 NCBI chrNW_004624818:3,900,917...3,915,457
Ensembl chrNW_004624818:3,900,917...3,911,042 		JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 acts_upstream_of_or_within ISO (PMID:19218085), (PMID:22048773) MGI PMID:19218085 PMID:22048773 NCBI chrNW_004624901:2,554,303...2,562,436
Ensembl chrNW_004624901:2,554,048...2,561,826 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in ISO (PMID:22187460) UniProt PMID:22187460 NCBI chrNW_004624737:8,021,478...8,154,543
Ensembl chrNW_004624737:8,022,836...8,154,422 		JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:23847051) MGI PMID:23847051 NCBI chrNW_004624877:3,293,980...3,328,337
Ensembl chrNW_004624877:3,292,244...3,328,660 		JBrowse link
G Psma6 proteasome 20S subunit alpha 6 involved_in ISO (PMID:16845397) BHF-UCL PMID:16845397 NCBI chrNW_004624838:1,449,362...1,474,597
Ensembl chrNW_004624838:1,449,266...1,486,382 		JBrowse link
G Ptges prostaglandin E synthase involved_in ISO (PMID:12835414) UniProt PMID:12835414 NCBI chrNW_004624760:5,643,549...5,653,747
Ensembl chrNW_004624760:5,643,501...5,654,475 		JBrowse link
G Pycard PYD and CARD domain containing acts_upstream_of_or_within
involved_in		 ISO (PMID:22002608), (PMID:22297845)
(PMID:21575908)		 MGI
UniProt		 PMID:21575908 PMID:22002608 PMID:22297845 NCBI chrNW_004624782:14,247,333...14,249,861
Ensembl chrNW_004624782:14,247,864...14,249,000 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24501220) MGI
Ensembl		 PMID:24501220 GO_REF:0000107 NCBI chrNW_004624767:20,732,813...20,742,016
Ensembl chrNW_004624767:20,732,938...20,741,272 		JBrowse link
G Rictor RPTOR independent companion of MTOR complex 2 acts_upstream_of_or_within ISO (PMID:24740015) MGI PMID:24740015 NCBI chrNW_004624759:15,837,027...15,973,248
Ensembl chrNW_004624759:15,837,064...15,968,894 		JBrowse link
G Rnh1 ribonuclease/angiogenin inhibitor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:21,945,412...21,956,482
Ensembl chrNW_004624766:21,951,260...21,958,058 		JBrowse link
G Sbno2 strawberry notch homolog 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:7,479,695...7,532,961
Ensembl chrNW_004624828:7,478,970...7,537,428 		JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 acts_upstream_of_or_within ISO (PMID:15356574) MGI PMID:15356574 NCBI chrNW_004624926:1,029,120...1,030,250 JBrowse link
G Sema7a semaphorin 7A (JohnMiltonHagen blood group) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624781:221,821...244,854
Ensembl chrNW_004624781:221,812...248,185 		JBrowse link
G Setd6 SET domain containing 6, protein lysine methyltransferase involved_in ISO (PMID:21131967) UniProt PMID:21131967 NCBI chrNW_004624746:27,756,934...27,762,194
Ensembl chrNW_004624746:27,758,683...27,762,179 		JBrowse link
G Shpk sedoheptulokinase involved_in ISO (PMID:22682222) UniProt PMID:22682222 NCBI chrNW_004624786:6,271,636...6,296,872
Ensembl chrNW_004624786:6,267,914...6,297,626 		JBrowse link
G Slc7a2 solute carrier family 7 member 2 acts_upstream_of_or_within ISO (PMID:17003120) MGI PMID:17003120 NCBI chrNW_004624769:21,678,084...21,757,168
Ensembl chrNW_004624769:21,681,709...21,757,213 		JBrowse link
G Spata2 spermatogenesis associated 2 involved_in ISO (PMID:27591049) UniProt PMID:27591049 NCBI chrNW_004624790:5,553,082...5,572,250 JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 acts_upstream_of_or_within ISO (PMID:28069950) MGI PMID:28069950 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
G Stk39 serine/threonine kinase 39 acts_upstream_of_or_within ISO (PMID:21705622) MGI PMID:21705622 NCBI chrNW_004624787:5,682,023...5,966,770
Ensembl chrNW_004624787:5,681,928...5,966,699 		JBrowse link
G Tbc1d23 TBC1 domain family member 23 acts_upstream_of_or_within ISO (PMID:22312129) MGI PMID:22312129 NCBI chrNW_004624789:13,685,458...13,749,820
Ensembl chrNW_004624789:13,685,089...13,753,046 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tnc tenascin C involved_in ISO (PMID:10594729) ComplexPortal PMID:10594729 NCBI chrNW_004624760:20,044,900...20,137,260
Ensembl chrNW_004624760:20,044,826...20,137,616 		JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (PMID:24349514) MGI PMID:24349514 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:12355440) BHF-UCL PMID:12355440 NCBI chrNW_004624771:8,580,489...8,599,735 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959 		JBrowse link
G Usp18 ubiquitin specific peptidase 18 involved_in ISO (PMID:27325888) UniProt PMID:27325888 NCBI chrNW_004624735:9,158,597...9,187,503 JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISO (PMID:31630209) UniProt PMID:31630209 NCBI chrNW_004624741:24,022,433...24,033,090 JBrowse link
regulation of inflammatory response to wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in ISO (PMID:28965882) UniProt PMID:28965882 NCBI chrNW_004624966:168,244...220,430
Ensembl chrNW_004624966:168,250...220,522 		JBrowse link
regulation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:29336888) UniProt PMID:29336888 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in ISO (PMID:27219021) UniProt PMID:27219021 NCBI chrNW_004624822:31,175...74,252
Ensembl chrNW_004624822:33,880...74,308 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in ISO (PMID:27219021) UniProt PMID:27219021 NCBI chrNW_004624750:3,789,015...3,827,079
Ensembl chrNW_004624750:3,789,022...3,827,079 		JBrowse link
G Casp8 caspase 8 involved_in ISO (PMID:32971525) UniProt PMID:32971525 NCBI chrNW_004624899:427,064...450,931
Ensembl chrNW_004624899:424,363...451,087 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in ISO (PMID:18411269) UniProt PMID:18411269 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Dusp10 dual specificity phosphatase 10 acts_upstream_of_or_within ISO (PMID:15306813) MGI PMID:15306813 NCBI chrNW_004624835:4,751,651...4,783,916
Ensembl chrNW_004624835:4,750,077...4,782,249 		JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase involved_in ISO (PMID:21746961) UniProt PMID:21746961 NCBI chrNW_004624764:11,482,719...11,513,215
Ensembl chrNW_004624764:11,489,685...11,513,270 		JBrowse link
G Lrp8 LDL receptor related protein 8 involved_in ISO (PMID:29336888) UniProt PMID:29336888 NCBI chrNW_004624934:1,145,982...1,220,177
Ensembl chrNW_004624934:1,146,000...1,215,922 		JBrowse link
G Myo1f myosin IF acts_upstream_of_or_within ISO (PMID:17023661) MGI PMID:17023661 NCBI chrNW_004624828:1,269,287...1,307,676
Ensembl chrNW_004624828:1,269,610...1,307,443 		JBrowse link
G N4bp1 NEDD4 binding protein 1 involved_in ISO (PMID:32971525) UniProt PMID:32971525 NCBI chrNW_004624914:2,319,809...2,369,128
Ensembl chrNW_004624914:2,319,474...2,369,078 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (PMID:16585964) UniProt PMID:16585964 NCBI chrNW_004624787:14,355,330...14,381,353
Ensembl chrNW_004624787:14,355,791...14,381,251 		JBrowse link
G Rnf135 ring finger protein 135 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624875:221,206...231,178
Ensembl chrNW_004624875:220,771...232,394 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624842:2,591,016...2,649,746
Ensembl chrNW_004624842:2,591,148...2,647,742 		JBrowse link
G Serpinb1 serpin family B member 1 involved_in ISO (PMID:17664292) UniProt PMID:17664292 NCBI chrNW_004624756:21,993,777...22,003,715
Ensembl chrNW_004624756:21,994,769...22,002,065 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Tkfc triokinase and FMN cyclase involved_in ISO (PMID:16289032) UniProt PMID:16289032 NCBI chrNW_004624926:862,339...870,936
Ensembl chrNW_004624926:862,339...869,926 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:30548312) UniProt PMID:30548312 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959 		JBrowse link
regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpk heterogeneous nuclear ribonucleoprotein K acts_upstream_of_or_within ISO (PMID:20673990) MGI PMID:20673990 NCBI chrNW_004624809:7,538,568...7,548,272 JBrowse link
regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tifab TIFA inhibitor acts_upstream_of_or_within ISO (PMID:32101751) MGI PMID:32101751 NCBI chrNW_004624733:11,578,934...11,587,250 JBrowse link
G Usp15 ubiquitin specific peptidase 15 acts_upstream_of_or_within ISO (PMID:32101751) MGI PMID:32101751 NCBI chrNW_004624802:5,559,107...5,682,338
Ensembl chrNW_004624802:5,560,574...5,682,300 		JBrowse link
regulation of IRE1-mediated unfolded protein response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cops5 COP9 signalosome subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624744:24,287,278...24,308,171
Ensembl chrNW_004624744:24,287,443...24,308,024 		JBrowse link
G Ficd FIC domain protein adenylyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:11,767,059...11,773,971
Ensembl chrNW_004624747:11,767,020...11,773,971 		JBrowse link
regulation of microglial cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO RGD PMID:28007901 RGD:12879399 NCBI chrNW_004624784:2,933,172...3,080,131
Ensembl chrNW_004624784:2,937,499...3,078,216 		JBrowse link
G Calhm2 calcium homeostasis modulator family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624831:2,673,753...2,679,024
Ensembl chrNW_004624831:2,673,753...2,680,083 		JBrowse link
G Hspa4 heat shock protein family A (Hsp70) member 4 ISO rat gene in mouse model RGD PMID:17473852 RGD:5688754 NCBI chrNW_004624733:39,022,511...39,068,153
Ensembl chrNW_004624733:39,021,738...39,068,132 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISO (PMID:29662056) UniProt PMID:29662056 NCBI chrNW_004624801:6,253,219...6,257,128 JBrowse link
regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 involved_in ISO (PMID:11017067) BHF-UCL PMID:11017067 NCBI chrNW_004624870:2,803,743...2,832,489
Ensembl chrNW_004624870:2,800,873...2,832,626 		JBrowse link
regulation of MyD88-dependent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf1 interferon regulatory factor 1 involved_in ISO (PMID:17018642) UniProt PMID:17018642 NCBI chrNW_004624733:39,596,565...39,603,428
Ensembl chrNW_004624733:39,596,501...39,603,526 		JBrowse link
G Irf7 interferon regulatory factor 7 involved_in ISO (PMID:15800576) UniProt PMID:15800576 NCBI chrNW_004624766:21,850,211...21,853,189 JBrowse link
regulation of MyD88-independent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf7 interferon regulatory factor 7 involved_in ISO (PMID:15800576) UniProt PMID:15800576 NCBI chrNW_004624766:21,850,211...21,853,189 JBrowse link
regulation of natural killer cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calhm6 calcium homeostasis modulator family member 6 involved_in ISO (PMID:36861806) UniProt PMID:36861806 NCBI chrNW_004624856:1,989,913...1,992,496
Ensembl chrNW_004624856:1,986,546...1,992,578 		JBrowse link
regulation of natural killer cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lep leptin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624783:7,708,820...7,721,610
Ensembl chrNW_004624783:7,708,588...7,721,727 		JBrowse link
G LOC101707925 killer cell lectin-like receptor subfamily B member 1C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:26,774,191...26,777,502 JBrowse link
G Pik3r6 phosphoinositide-3-kinase regulatory subunit 6 involved_in ISO (PMID:11062502) CACAO PMID:11062502 NCBI chrNW_004624786:11,324,558...11,386,202
Ensembl chrNW_004624786:11,326,364...11,371,767 		JBrowse link
regulation of neuroinflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd200 CD200 molecule involved_in ISO PMID:10981966 ARUK-UCL PMID:10981966 RGD:61663 NCBI chrNW_004624731:36,224,360...36,251,656
Ensembl chrNW_004624731:36,223,673...36,251,542 		JBrowse link
G Dagla diacylglycerol lipase alpha involved_in ISO (PMID:26779719) UniProt PMID:26779719 NCBI chrNW_004624926:638,432...680,726
Ensembl chrNW_004624926:638,259...656,953 		JBrowse link
G LOC101698660 cell surface glycoprotein CD200 receptor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624731:35,661,049...35,670,300 JBrowse link
G LOC101724227 cell surface glycoprotein CD200 receptor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624731:35,540,792...35,603,597 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624814:6,897,818...6,904,890
Ensembl chrNW_004624814:6,897,857...6,903,728 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISO PMID:28284343
(PMID:29662056)		 UniProt PMID:28284343 PMID:29662056 RGD:14397556 NCBI chrNW_004624801:6,253,219...6,257,128 JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO (PMID:28052249) ARUK-UCL PMID:28052249 NCBI chrNW_004624818:894,470...922,806
Ensembl chrNW_004624818:896,150...922,710 		JBrowse link
regulation of neuron projection regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO (PMID:23447615) MGI PMID:23447615 NCBI chrNW_004624826:8,361,039...8,435,488
Ensembl chrNW_004624826:8,361,033...8,435,656 		JBrowse link
regulation of NLRP3 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in ISO (PMID:22801494) UniProt PMID:22801494 NCBI chrNW_004624738:18,716,623...18,764,243
Ensembl chrNW_004624738:18,717,092...18,758,457 		JBrowse link
G Kcnk13 potassium two pore domain channel subfamily K member 13 involved_in ISO (PMID:35353387) UniProt PMID:35353387 NCBI chrNW_004624734:12,206,237...12,319,321
Ensembl chrNW_004624734:12,207,094...12,317,720 		JBrowse link
regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a2 solute carrier family 15 member 2 involved_in ISO (PMID:29784761) UniProt PMID:29784761 NCBI chrNW_004624912:180,048...222,909
Ensembl chrNW_004624912:179,969...222,909 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:29784761) UniProt PMID:29784761 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Peli3 pellino E3 ubiquitin protein ligase family member 3 acts_upstream_of_or_within ISO (PMID:23892723) MGI PMID:23892723 NCBI chrNW_004624767:19,920,149...19,938,892
Ensembl chrNW_004624767:19,920,687...19,929,638 		JBrowse link
regulation of nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul4a cullin 4A acts_upstream_of_or_within ISO (PMID:19481525) MGI PMID:19481525 NCBI chrNW_004624793:686,720...722,516
Ensembl chrNW_004624793:688,135...722,490 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:18650382) UniProt PMID:18650382 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO (PMID:28719581) UniProt PMID:28719581 NCBI chrNW_004624795:5,859,974...5,892,519
Ensembl chrNW_004624795:5,859,443...5,892,527 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within ISO (PMID:19506022) MGI PMID:19506022 NCBI chrNW_004624735:9,123,599...9,153,373 JBrowse link
regulation of removal of superoxide radicals term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule (CD36 blood group) involved_in ISO (PMID:20978343) BHF-UCL PMID:20978343 NCBI chrNW_004624739:29,341,620...29,441,232
Ensembl chrNW_004624739:29,407,568...29,441,333 		JBrowse link
G Dhfr dihydrofolate reductase involved_in ISO (PMID:19666465) BHF-UCL PMID:19666465 NCBI chrNW_004624743:1,446,643...1,462,319
Ensembl chrNW_004624743:1,446,643...1,461,863 		JBrowse link
G Fbln5 fibulin 5 involved_in ISO (PMID:15528465) BHF-UCL PMID:15528465 NCBI chrNW_004624734:10,768,920...10,840,740
Ensembl chrNW_004624734:10,768,751...10,843,654 		JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in ISO (PMID:19666465) BHF-UCL PMID:19666465 NCBI chrNW_004624731:14,459,164...14,502,485
Ensembl chrNW_004624731:14,459,303...14,500,429 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (PMID:20978343) BHF-UCL PMID:20978343 NCBI chrNW_004624787:14,355,330...14,381,353
Ensembl chrNW_004624787:14,355,791...14,381,251 		JBrowse link
regulation of respiratory burst involved in inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncf1 neutrophil cytosolic factor 1 ISO RGD PMID:21275845 RGD:41404729 NCBI chrNW_004624740:13,428,375...13,439,915
Ensembl chrNW_004624740:13,429,476...13,439,807 		JBrowse link
regulation of response to endoplasmic reticulum stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Manf mesencephalic astrocyte derived neurotrophic factor involved_in ISO (PMID:29497057) UniProt PMID:29497057 NCBI chrNW_004624730:5,165,169...5,168,240
Ensembl chrNW_004624730:5,165,200...5,168,240 		JBrowse link
G Mbtps2 membrane bound transcription factor peptidase, site 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624829:6,795,563...6,839,416
Ensembl chrNW_004624829:6,795,528...6,834,604 		JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within ISO (PMID:29400713) MGI PMID:29400713 NCBI chrNW_004624795:4,652,221...4,663,341
Ensembl chrNW_004624795:4,652,637...4,662,454 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISO PMID:28694771
(PMID:30451898)		 UniProt PMID:28694771 PMID:30451898 RGD:14390049 NCBI chrNW_004624782:13,042,938...13,044,298
Ensembl chrNW_004624782:13,042,939...13,044,267 		JBrowse link
regulation of response to osmotic stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gypa glycophorin A (MNS blood group) acts_upstream_of_or_within ISO (PMID:12940824) MGI PMID:12940824 NCBI chrNW_004624853:3,132,961...3,158,461 JBrowse link
G Mlc1 modulator of VRAC current 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:653,224...675,875
Ensembl chrNW_004624752:654,076...675,863 		JBrowse link
G Ryr1 ryanodine receptor 1 ISO RGD PMID:19398777 RGD:329848957 NCBI chrNW_004624794:11,888,211...12,004,457
Ensembl chrNW_004624794:11,888,289...12,004,314 		JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 NOT|involved_in
acts_upstream_of_or_within		 ISO PMID:23136043
(PMID:12777254)		 UniProt
MGI		 PMID:12777254 PMID:23136043 RGD:10400856 NCBI chrNW_004624747:10,675,625...10,685,351 JBrowse link
regulation of response to oxidative stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh2 aldehyde dehydrogenase 2 family member ISO RGD PMID:30131474 RGD:15036798 NCBI chrNW_004624747:20,407,190...20,438,605
Ensembl chrNW_004624747:20,403,717...20,438,690 		JBrowse link
G LOC101706296 core histone macro-H2A.1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:11,650,067...11,714,399
Ensembl chrNW_004624733:11,650,537...11,715,999 		JBrowse link
G Stox1 storkhead box 1 involved_in ISO (PMID:24738702) UniProt PMID:24738702 NCBI chrNW_004624754:3,110,951...3,119,511
Ensembl chrNW_004624754:3,111,269...3,122,425 		JBrowse link
regulation of response to reactive oxygen species term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sesn1 sestrin 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624916:231,168...332,423
Ensembl chrNW_004624916:230,348...332,985 		JBrowse link
G Sesn2 sestrin 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624764:12,087,901...12,135,145
Ensembl chrNW_004624764:12,087,858...12,120,914 		JBrowse link
G Sesn3 sestrin 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624735:39,859,414...39,930,642
Ensembl chrNW_004624735:39,866,097...39,929,614 		JBrowse link
regulation of response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp9 poly(ADP-ribose) polymerase family member 9 involved_in ISO (PMID:16809771) UniProt PMID:16809771 NCBI chrNW_004624912:827,112...968,501
Ensembl chrNW_004624912:827,547...859,199 		JBrowse link
regulation of response to wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624807:4,687,249...4,691,658
Ensembl chrNW_004624807:4,687,176...4,691,732 		JBrowse link
regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:27824081) UniProt PMID:27824081 NCBI chrNW_004624832:6,144,260...6,154,172
Ensembl chrNW_004624832:6,145,749...6,154,411 		JBrowse link
regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:25378300) MGI PMID:25378300 NCBI chrNW_004624807:446,662...478,571
Ensembl chrNW_004624807:446,647...479,069 		JBrowse link
regulation of SREBP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amfr autocrine motility factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624757:136,289...179,743
Ensembl chrNW_004624757:136,283...179,138 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (PMID:28797121) MGI PMID:28797121 NCBI chrNW_004624747:23,389,262...23,399,962
Ensembl chrNW_004624747:23,389,262...23,399,955 		JBrowse link
regulation of stress-activated MAPK cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fas Fas cell surface death receptor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist NOT|involved_in ISO (PMID:12135612) BHF-UCL PMID:12135612 NCBI chrNW_004624804:1,606,182...1,620,932
Ensembl chrNW_004624804:1,608,757...1,620,938 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531 		JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624828:5,489,085...5,511,166
Ensembl chrNW_004624828:5,488,814...5,511,445 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624747:1,296,062...1,389,674
Ensembl chrNW_004624747:1,296,221...1,389,757 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624782:13,150,824...13,158,327
Ensembl chrNW_004624782:13,152,039...13,159,113 		JBrowse link
G Nbr1 NBR1 autophagy cargo receptor involved_in ISO (PMID:20616007) BHF-UCL PMID:20616007 NCBI chrNW_004624795:1,160,588...1,185,919 JBrowse link
G Prdx1 peroxiredoxin 1 acts_upstream_of_or_within ISO (PMID:16880205) MGI PMID:16880205 NCBI chrNW_004624906:1,405,253...1,414,980
Ensembl chrNW_004624906:1,405,253...1,414,926 		JBrowse link
regulation of stress-activated protein kinase signaling cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (PMID:16079796) MGI PMID:16079796 NCBI chrNW_004624764:22,723,643...22,777,517
Ensembl chrNW_004624764:22,723,291...22,778,761 		JBrowse link
regulation of toll-like receptor 3 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flot2 flotillin 2 NOT|involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004624786:1,449,001...1,465,208
Ensembl chrNW_004624786:1,450,234...1,465,102 		JBrowse link
G Hcfc2 host cell factor C2 acts_upstream_of_or_within ISO (PMID:28970238) MGI PMID:28970238 NCBI chrNW_004624750:4,627,848...4,660,448
Ensembl chrNW_004624750:4,629,669...4,660,413 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:37158982) UniProt PMID:37158982 NCBI chrNW_004624842:2,212,561...2,260,514
Ensembl chrNW_004624842:2,211,020...2,230,132 		JBrowse link
regulation of toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in ISO (PMID:27219021) UniProt PMID:27219021 NCBI chrNW_004624822:31,175...74,252
Ensembl chrNW_004624822:33,880...74,308 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in ISO (PMID:27219021) UniProt PMID:27219021 NCBI chrNW_004624750:3,789,015...3,827,079
Ensembl chrNW_004624750:3,789,022...3,827,079 		JBrowse link
G Flot1 flotillin 1 NOT|involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004624754:24,992,961...25,000,463
Ensembl chrNW_004624754:24,992,929...25,003,759 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO (PMID:19289601) UniProt PMID:19289601 NCBI chrNW_004624815:1,290,106...1,376,961
Ensembl chrNW_004624815:1,289,997...1,369,610 		JBrowse link
regulation of toll-like receptor 6 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:31134514) ARUK-UCL PMID:31134514 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
regulation of toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO (PMID:20037584) ARUK-UCL PMID:20037584 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in ISO (PMID:20037584) ARUK-UCL PMID:20037584 NCBI chrNW_004624739:29,341,620...29,441,232
Ensembl chrNW_004624739:29,407,568...29,441,333 		JBrowse link
G Esr1 estrogen receptor 1 acts_upstream_of_or_within ISO (PMID:22659029) MGI PMID:22659029 NCBI chrNW_004624785:6,164,507...6,601,302
Ensembl chrNW_004624785:6,164,379...6,601,326 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624742:5,260,651...5,271,908
Ensembl chrNW_004624742:5,261,537...5,270,695 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (PMID:20616063) UniProt PMID:20616063 NCBI chrNW_004624839:4,908,861...5,000,218
Ensembl chrNW_004624839:4,908,639...5,000,677 		JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624762:25,427,519...25,448,180
Ensembl chrNW_004624762:25,430,926...25,448,114 		JBrowse link
regulation of transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:17297471) UniProt PMID:17297471 NCBI chrNW_004624815:9,054,576...9,135,136
Ensembl chrNW_004624815:9,054,651...9,134,286 		JBrowse link
regulation of type I interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc37 cell division cycle 37, HSP90 cochaperone acts_upstream_of_or_within ISO (PMID:16280321) MGI PMID:16280321 NCBI chrNW_004624828:2,523,761...2,533,387
Ensembl chrNW_004624828:2,521,272...2,535,475 		JBrowse link
regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc37 cell division cycle 37, HSP90 cochaperone acts_upstream_of_or_within ISO (PMID:16280321) MGI PMID:16280321 NCBI chrNW_004624828:2,523,761...2,533,387
Ensembl chrNW_004624828:2,521,272...2,535,475 		JBrowse link
regulation of type IV hypersensitivity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fut7 fucosyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:876,048...877,984
Ensembl chrNW_004624760:876,059...877,574 		JBrowse link
regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm4 cell adhesion molecule 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:1,152,063...1,168,587
Ensembl chrNW_004624907:1,152,645...1,168,589 		JBrowse link
G Crk CRK proto-oncogene, adaptor protein NOT|involved_in ISO (PMID:17515907) CAFA PMID:17515907 NCBI chrNW_004624786:4,153,783...4,177,611
Ensembl chrNW_004624786:4,153,889...4,177,716 		JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in ISO (PMID:24440982) UniProt PMID:24440982 NCBI chrNW_004624790:10,812,013...10,817,414
Ensembl chrNW_004624790:10,812,013...10,817,833 		JBrowse link
G Vil1 villin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:6,567,107...6,593,258
Ensembl chrNW_004624823:6,566,687...6,588,599 		JBrowse link
RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clpb ClpB family mitochondrial disaggregase involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004624817:4,593,823...4,735,573
Ensembl chrNW_004624817:4,593,639...4,735,091 		JBrowse link
G Lsm14a LSM14A mRNA processing body assembly factor acts_upstream_of_or_within ISO (PMID:22745163) MGI PMID:22745163 NCBI chrNW_004624794:8,913,278...9,035,652 JBrowse link
G Mavs mitochondrial antiviral signaling protein acts_upstream_of_or_within ISO (PMID:22745163) MGI PMID:22745163 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Phb1 prohibitin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:5,556,728...5,565,969
Ensembl chrNW_004624795:5,556,450...5,565,988 		JBrowse link
G Phb2 prohibitin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624860:3,599,435...3,605,016
Ensembl chrNW_004624860:3,599,687...3,604,872 		JBrowse link
G Rigi RNA sensor RIG-I involved_in ISO (PMID:19211564)
(PMID:28469175)		 UniProt PMID:19211564 PMID:28469175 NCBI chrNW_004624736:37,134,718...37,204,543
Ensembl chrNW_004624736:37,133,059...37,197,218 		JBrowse link
G Rnf135 ring finger protein 135 involved_in ISO (PMID:28469175), (PMID:31006531)
(PMID:21147464), (PMID:28469175)
(PMID:23950712)		 UniProt PMID:21147464 PMID:23950712 PMID:28469175 PMID:31006531 NCBI chrNW_004624875:221,206...231,178
Ensembl chrNW_004624875:220,771...232,394 		JBrowse link
G Trim25 tripartite motif containing 25 NOT|involved_in ISO (PMID:31006531) UniProt PMID:31006531 NCBI chrNW_004624795:11,967,908...11,986,707
Ensembl chrNW_004624795:11,971,610...11,986,608 		JBrowse link
SREBP-SCAP complex retention in endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insig1 insulin induced gene 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624800:2,533,010...2,543,754
Ensembl chrNW_004624800:2,534,967...2,543,075 		JBrowse link
G Insig2 insulin induced gene 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624732:27,089,776...27,110,170
Ensembl chrNW_004624732:27,087,674...27,104,181 		JBrowse link
G LOC101701184 insulin-induced gene 1 protein-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624789:10,635,098...10,635,822 JBrowse link
stimulatory C-type lectin receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A involved_in ISO (PMID:19136564) ARUK-UCL PMID:19136564 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
G LOC101711887 natural killer cells antigen CD94 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:27,025,423...27,037,076 JBrowse link
G LOC101713681 NKG2-A/NKG2-B type II integral membrane protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:27,152,550...27,156,788 JBrowse link
G LOC101715335 natural killer cells antigen CD94-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624826:5,910,337...5,912,506 JBrowse link
G LOC110349333 natural killer cells antigen CD94-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:27,009,822...27,016,128 JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (PMID:19136564), (PMID:22041900) ARUK-UCL PMID:19136564 PMID:22041900 NCBI chrNW_004624746:5,678,057...5,824,663
Ensembl chrNW_004624746:5,682,666...5,821,855 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391 		JBrowse link
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in ISO (PMID:9655483) UniProt PMID:9655483 NCBI chrNW_004624794:10,183,934...10,187,180
Ensembl chrNW_004624794:10,183,515...10,187,244 		JBrowse link
stimulatory killer cell immunoglobulin-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in ISO (PMID:9655483) UniProt PMID:9655483 NCBI chrNW_004624794:10,183,934...10,187,180
Ensembl chrNW_004624794:10,183,515...10,187,244 		JBrowse link
susceptibility to natural killer cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624784:10,595,876...10,933,024
Ensembl chrNW_004624784:10,591,824...10,932,981 		JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO (PMID:12913096) BHF-UCL PMID:12913096 NCBI chrNW_004624907:1,713,786...1,739,158
Ensembl chrNW_004624907:1,713,443...1,740,627 		JBrowse link
TIRAP-dependent toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:11544529) BHF-UCL PMID:11544529 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
toll-like receptor 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:14660645) UniProt PMID:14660645 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:10383454)
(PMID:10549626)		 BHF-UCL
MGI		 PMID:10383454 PMID:10549626 NCBI chrNW_004624946:613,392...618,459
Ensembl chrNW_004624946:613,890...618,445 		JBrowse link
G Lgals9 galectin 9 NOT|involved_in ISO (PMID:16116184) UniProt PMID:16116184 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of ISO (PMID:15220916) MGI PMID:15220916 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in ISO (PMID:22187460) UniProt PMID:22187460 NCBI chrNW_004624737:8,021,478...8,154,543
Ensembl chrNW_004624737:8,022,836...8,154,422 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:11894098) MGI PMID:11894098 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890 		JBrowse link
G Tlr2 toll like receptor 2 involved_in ISO (PMID:17128265) BHF-UCL PMID:17128265 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624755:24,976,375...24,995,150
Ensembl chrNW_004624755:24,976,361...25,001,397 		JBrowse link
toll-like receptor 3 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd86 CD86 molecule involved_in ISO (PMID:25158758) UniProt PMID:25158758 NCBI chrNW_004624912:350,201...432,410
Ensembl chrNW_004624912:350,157...426,712 		JBrowse link
G Colec12 collectin subfamily member 12 involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004624770:10,860,097...11,136,478
Ensembl chrNW_004624770:10,859,205...11,013,175 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:22842346) UniProt PMID:22842346 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Lgals9 galectin 9 involved_in ISO PMID:25158758 UniProt PMID:25158758 RGD:10054077 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G Oas1 2'-5'-oligoadenylate synthetase 1 involved_in ISO (PMID:30078389) ARUK-UCL PMID:30078389 NCBI chrNW_004624747:19,428,994...19,434,512
Ensembl chrNW_004624747:19,428,833...19,434,550 		JBrowse link
G Rftn1 raftlin, lipid raft linker 1 acts_upstream_of_or_within ISO (PMID:21266579) MGI PMID:21266579 NCBI chrNW_004624821:1,561,845...1,763,654
Ensembl chrNW_004624821:1,562,778...1,751,345 		JBrowse link
G Rnf170 ring finger protein 170 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624780:67,160...127,620
Ensembl chrNW_004624780:66,049...126,383 		JBrowse link
G Scara3 scavenger receptor class A member 3 NOT|involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004624758:22,454,181...22,488,431
Ensembl chrNW_004624758:22,454,213...22,488,452 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:8,975,216...8,982,825
Ensembl chrNW_004624786:8,974,587...9,007,986 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (PMID:12471095) UniProt PMID:12471095 NCBI chrNW_004624828:4,964,199...4,973,465
Ensembl chrNW_004624828:4,971,093...4,973,198 		JBrowse link
G Tlr3 toll like receptor 3 involved_in ISO (PMID:17128265), (PMID:18172197) UniProt PMID:17128265 PMID:18172197 NCBI chrNW_004624769:16,925,969...16,945,250
Ensembl chrNW_004624769:16,925,984...16,941,196 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO PMID:25158758 UniProt PMID:25158758 RGD:10054077 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531 		JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624755:24,976,375...24,995,150
Ensembl chrNW_004624755:24,976,361...25,001,397 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:18,859,990...18,869,083
Ensembl chrNW_004624767:18,860,017...18,868,581 		JBrowse link
toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:33,372,023...33,374,438
Ensembl chrNW_004624743:33,367,898...33,373,922 		JBrowse link
G Cd180 CD180 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624815:2,511,506...2,528,396
Ensembl chrNW_004624815:2,511,552...2,529,891 		JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex involved_in ISO (PMID:26189595) UniProt PMID:26189595 NCBI chrNW_004624737:12,022,081...12,052,128
Ensembl chrNW_004624737:12,022,419...12,052,131 		JBrowse link
G Ecsit ECSIT signaling integrator involved_in ISO (PMID:25371197) UniProt PMID:25371197 NCBI chrNW_004624828:3,264,054...3,276,270
Ensembl chrNW_004624828:3,264,149...3,269,030 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:14660645) UniProt PMID:14660645 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 acts_upstream_of_or_within ISO (PMID:10549626) MGI PMID:10549626 NCBI chrNW_004624946:613,392...618,459
Ensembl chrNW_004624946:613,890...618,445 		JBrowse link
G Irak2 interleukin 1 receptor associated kinase 2 involved_in ISO (PMID:17878161) UniProt PMID:17878161 NCBI chrNW_004624731:5,294,464...5,348,426
Ensembl chrNW_004624731:5,294,431...5,348,481 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in ISO (PMID:25636800) UniProt PMID:25636800 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G Letmd1 LETM1 domain containing 1 acts_upstream_of_or_within ISO (PMID:31980577) MGI PMID:31980577 NCBI chrNW_004624816:1,148,634...1,170,981
Ensembl chrNW_004624816:1,158,662...1,170,988 		JBrowse link
G Lgals9 galectin 9 NOT|involved_in ISO (PMID:16116184) UniProt PMID:16116184 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G LOC101722352 TIR domain-containing adapter molecule 2 involved_in ISO (PMID:28630139) UniProt PMID:28630139 NCBI chrNW_004624733:6,304,454...6,341,827 JBrowse link
G Ly96 lymphocyte antigen 96 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624744:17,209,285...17,241,347
Ensembl chrNW_004624744:17,208,990...17,241,347 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624886:4,029,318...4,168,797
Ensembl chrNW_004624886:4,027,178...4,168,902 		JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 involved_in ISO (PMID:25371197) UniProt PMID:25371197 NCBI chrNW_004624799:3,554,644...3,623,317
Ensembl chrNW_004624799:3,554,678...3,622,289 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:29624734) MGI PMID:29624734 NCBI chrNW_004624795:1,553,582...1,558,110
Ensembl chrNW_004624795:1,553,037...1,558,197 		JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624838:1,384,337...1,387,602
Ensembl chrNW_004624838:1,384,204...1,390,205 		JBrowse link
G Nmi N-myc and STAT interactor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624866:4,230,258...4,263,156
Ensembl chrNW_004624866:4,229,535...4,263,688 		JBrowse link
G Oas1 2'-5'-oligoadenylate synthetase 1 involved_in ISO (PMID:30078389) ARUK-UCL PMID:30078389 NCBI chrNW_004624747:19,428,994...19,434,512
Ensembl chrNW_004624747:19,428,833...19,434,550 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in ISO (PMID:22187458), (PMID:22187460) UniProt PMID:22187458 PMID:22187460 NCBI chrNW_004624737:8,021,478...8,154,543
Ensembl chrNW_004624737:8,022,836...8,154,422 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,732,813...20,742,016
Ensembl chrNW_004624767:20,732,938...20,741,272 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:11894098) MGI PMID:11894098 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890 		JBrowse link
G S100a14 S100 calcium binding protein A14 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624885:3,529,813...3,531,314
Ensembl chrNW_004624885:3,529,026...3,532,182 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:8,975,216...8,982,825
Ensembl chrNW_004624786:8,974,587...9,007,986 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:28747347) UniProt PMID:28747347 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (PMID:12471095) UniProt PMID:12471095 NCBI chrNW_004624828:4,964,199...4,973,465
Ensembl chrNW_004624828:4,971,093...4,973,198 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25549946) MGI
Ensembl
TreeGrafter		 PMID:25549946 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tmem126a transmembrane protein 126A acts_upstream_of_or_within ISO (PMID:25549946) MGI PMID:25549946 NCBI chrNW_004624845:4,264,497...4,272,973 JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO (PMID:17088249) UniProt PMID:17088249 NCBI chrNW_004624777:1,124,389...1,222,450
Ensembl chrNW_004624777:1,124,204...1,158,324 		JBrowse link
G Traf3 TNF receptor associated factor 3 involved_in ISO (PMID:18222170) UniProt PMID:18222170 NCBI chrNW_004624734:1,728,353...1,820,345
Ensembl chrNW_004624734:1,728,255...1,786,010 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:10,729,766...10,803,253
Ensembl chrNW_004624767:10,729,413...10,748,455 		JBrowse link
G Tril TLR4 interactor with leucine rich repeats involved_in ISO (PMID:19710467) UniProt PMID:19710467 NCBI chrNW_004624739:1,663,916...1,668,258
Ensembl chrNW_004624739:1,664,432...1,666,867 		JBrowse link
toll-like receptor 5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (PMID:16751103) UniProt PMID:16751103 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G Tirap TIR domain containing adaptor protein NOT|involved_in ISO (PMID:12447442) BHF-UCL PMID:12447442 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Tlr5 toll like receptor 5 involved_in ISO (PMID:14625549), (PMID:17128265) BHF-UCL PMID:14625549 PMID:17128265 NCBI chrNW_004624835:5,495,723...5,503,462
Ensembl chrNW_004624835:5,500,461...5,503,034 		JBrowse link
toll-like receptor 7 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:22842346) UniProt PMID:22842346 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in ISO (PMID:22187458) UniProt PMID:22187458 NCBI chrNW_004624737:8,021,478...8,154,543
Ensembl chrNW_004624737:8,022,836...8,154,422 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:8,975,216...8,982,825
Ensembl chrNW_004624786:8,974,587...9,007,986 		JBrowse link
G Tlr7 toll like receptor 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:18,859,990...18,869,083
Ensembl chrNW_004624767:18,860,017...18,868,581 		JBrowse link
toll-like receptor 8 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (PMID:33718825) UniProt PMID:33718825 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G Tlr7 toll like receptor 7 involved_in ISO (PMID:12032557) GO_Central PMID:12032557 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Tlr8 toll like receptor 8 involved_in ISO (PMID:12032557), (PMID:24942581), (PMID:33718825) UniProt PMID:12032557 PMID:24942581 PMID:33718825 NCBI chrNW_004624882:1,240,519...1,247,311
Ensembl chrNW_004624882:1,240,626...1,312,468 		JBrowse link
toll-like receptor 9 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_positive_effect ISO (PMID:29130391) UniProt PMID:29130391 NCBI chrNW_004624778:9,490,744...9,614,289
Ensembl chrNW_004624778:9,491,258...9,614,299 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:22842346) UniProt PMID:22842346 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (PMID:23372731) UniProt PMID:23372731 NCBI chrNW_004624750:7,222,306...7,303,809
Ensembl chrNW_004624750:7,219,251...7,303,834 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in ISO (PMID:22187458), (PMID:22187460) UniProt PMID:22187458 PMID:22187460 NCBI chrNW_004624737:8,021,478...8,154,543
Ensembl chrNW_004624737:8,022,836...8,154,422 		JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in ISO (PMID:16633345) UniProt PMID:16633345 NCBI chrNW_004624755:24,976,375...24,995,150
Ensembl chrNW_004624755:24,976,361...25,001,397 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:18,859,990...18,869,083
Ensembl chrNW_004624767:18,860,017...18,868,581 		JBrowse link
toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO (PMID:20847273) MGI PMID:20847273 NCBI chrNW_004624869:2,459,370...2,741,529
Ensembl chrNW_004624869:2,459,947...2,741,328 		JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in ISO (PMID:16831874) UniProt PMID:16831874 NCBI chrNW_004624742:12,210,333...12,222,533
Ensembl chrNW_004624742:12,210,360...12,221,759 		JBrowse link
G Cd180 CD180 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624815:2,511,506...2,528,396
Ensembl chrNW_004624815:2,511,552...2,529,891 		JBrowse link
G Cd86 CD86 molecule acts_upstream_of_or_within ISO (PMID:19734906) MGI PMID:19734906 NCBI chrNW_004624912:350,201...432,410
Ensembl chrNW_004624912:350,157...426,712 		JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,519,054...20,525,311
Ensembl chrNW_004624767:20,519,313...20,524,554 		JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 ISO RGD PMID:27832756 RGD:34888235 NCBI chrNW_004624802:2,042,486...2,098,921
Ensembl chrNW_004624802:2,047,409...2,098,545 		JBrowse link
G LOC101703392 twinfilin-2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:6,004,706...6,020,876 JBrowse link
G LOC101707222 toll-like receptor 12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:16,546,107...16,548,950 JBrowse link
G Lrrc19 leucine rich repeat containing 19 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:31,208,583...31,218,754
Ensembl chrNW_004624736:31,206,168...31,218,754 		JBrowse link
G Ly96 lymphocyte antigen 96 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624744:17,209,285...17,241,347
Ensembl chrNW_004624744:17,208,990...17,241,347 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (PMID:17906627) UniProt PMID:17906627 NCBI chrNW_004624807:4,726,511...4,774,945
Ensembl chrNW_004624807:4,724,234...4,796,143 		JBrowse link
G Mapkapk3 MAPK activated protein kinase 3 involved_in ISO (PMID:17906627) UniProt PMID:17906627 NCBI chrNW_004624730:4,446,815...4,492,753
Ensembl chrNW_004624730:4,446,850...4,476,630 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:23728777)
(PMID:25124037)		 MGI PMID:23728777 PMID:25124037 NCBI chrNW_004624789:15,612,311...15,623,878
Ensembl chrNW_004624789:15,612,335...15,624,152 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (PMID:19136564) ARUK-UCL PMID:19136564 NCBI chrNW_004624746:5,678,057...5,824,663
Ensembl chrNW_004624746:5,682,666...5,821,855 		JBrowse link
G Rps6ka3 ribosomal protein S6 kinase A3 involved_in ISO (PMID:17906627) UniProt PMID:17906627 NCBI chrNW_004624829:4,978,181...5,087,493
Ensembl chrNW_004624829:4,983,282...5,087,485 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (PMID:12471095) UniProt PMID:12471095 NCBI chrNW_004624828:4,964,199...4,973,465
Ensembl chrNW_004624828:4,971,093...4,973,198 		JBrowse link
G Tifab TIFA inhibitor acts_upstream_of_negative_effect ISO (PMID:26458771) MGI PMID:26458771 NCBI chrNW_004624733:11,578,934...11,587,250 JBrowse link
G Tlr1 toll like receptor 1 involved_in IEA
ISO		 TreeGrafter
InterPro
RGD		 PMID:16973131 GO_REF:0000002 GO_REF:0000118 RGD:1643119 NCBI chrNW_004624840:7,287,772...7,349,282
Ensembl chrNW_004624840:7,287,781...7,290,162 		JBrowse link
G Tlr10 toll like receptor 10 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624840:7,269,628...7,273,316 JBrowse link
G Tlr2 toll like receptor 2 involved_in ISO
IEA		 RGD
TreeGrafter
InterPro
UniProt		 PMID:16973131 PMID:18353287 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 RGD:1643119 RGD:5684896 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Tlr3 toll like receptor 3 involved_in ISO (PMID:18172197) RGD
UniProt		 PMID:16973131 PMID:18172197 RGD:1643119 NCBI chrNW_004624769:16,925,969...16,945,250
Ensembl chrNW_004624769:16,925,984...16,941,196 		JBrowse link
G Tlr4 toll like receptor 4 involved_in ISO
IEA		 RGD
InterPro
TreeGrafter
Ensembl		 PMID:16973131 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1643119 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tlr5 toll like receptor 5 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624835:5,495,723...5,503,462
Ensembl chrNW_004624835:5,500,461...5,503,034 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO
IEA		 RGD
TreeGrafter
InterPro		 PMID:16973131 PMID:18353287 GO_REF:0000002 GO_REF:0000118 RGD:1643119 RGD:5684896 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
G Tlr7 toll like receptor 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Tlr8 toll like receptor 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624882:1,240,519...1,247,311
Ensembl chrNW_004624882:1,240,626...1,312,468 		JBrowse link
G Traf3 TNF receptor associated factor 3 involved_in ISO (PMID:16306937)
(PMID:18222170)		 UniProt PMID:16306937 PMID:18222170 NCBI chrNW_004624734:1,728,353...1,820,345
Ensembl chrNW_004624734:1,728,255...1,786,010 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16415873) InterPro
MGI		 PMID:16415873 GO_REF:0000002 NCBI chrNW_004624767:18,859,990...18,869,083
Ensembl chrNW_004624767:18,860,017...18,868,581 		JBrowse link
toll-like receptor TLR1:TLR2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:8,975,216...8,982,825
Ensembl chrNW_004624786:8,974,587...9,007,986 		JBrowse link
toll-like receptor TLR6:TLR2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (PMID:36964784) UniProt PMID:36964784 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,732,813...20,742,016
Ensembl chrNW_004624767:20,732,938...20,741,272 		JBrowse link
G Tlr2 toll like receptor 2 involved_in ISO (PMID:23626692) ComplexPortal PMID:23626692 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (PMID:23626692) ComplexPortal PMID:23626692 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
TRAM-dependent toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101722352 TIR domain-containing adapter molecule 2 involved_in ISO (PMID:22685567)
(PMID:19412184)		 UniProt PMID:19412184 PMID:22685567 NCBI chrNW_004624733:6,304,454...6,341,827 JBrowse link
G Prkce protein kinase C epsilon involved_in ISO (PMID:16757566) UniProt PMID:16757566 NCBI chrNW_004624738:27,118,764...27,630,733
Ensembl chrNW_004624738:27,118,145...27,627,606 		JBrowse link
G Rab11fip2 RAB11 family interacting protein 2 involved_in ISO (PMID:30883606) UniProt PMID:30883606 NCBI chrNW_004624737:28,633,815...28,675,773
Ensembl chrNW_004624737:28,634,079...28,686,886 		JBrowse link
TRIF-dependent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd274 CD274 molecule involved_in ISO (PMID:36232715) UniProt PMID:36232715 NCBI chrNW_004624736:9,991,851...10,017,047
Ensembl chrNW_004624736:9,996,156...10,013,814 		JBrowse link
G Cd300lf CD300 molecule like family member f involved_in ISO (PMID:22043923) UniProt PMID:22043923 NCBI chrNW_004624801:4,573,010...4,587,632
Ensembl chrNW_004624801:4,573,010...4,587,592 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in ISO (PMID:25636800) UniProt PMID:25636800 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G LOC101722352 TIR domain-containing adapter molecule 2 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624733:6,304,454...6,341,827 JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624828:4,964,199...4,973,465
Ensembl chrNW_004624828:4,971,093...4,973,198 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (PMID:20037584) ARUK-UCL PMID:20037584 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17650
    response to stimulus 8935
      response to stress 3718
        regulation of response to stress 1310
          regulation of cardiac muscle hypertrophy in response to stress + 11
          regulation of cellular response to stress + 489
          regulation of defense response + 767
          regulation of fear response + 17
          regulation of filamentous growth of a population of unicellular organisms in response to heat + 0
          regulation of filamentous growth of a population of unicellular organisms in response to starvation + 0
          regulation of response to osmotic stress + 16
          regulation of response to oxidative stress + 42
          regulation of response to water deprivation + 0
          regulation of response to wounding + 172
          regulation of stress response to copper ion + 0
          regulation of vernalization response + 0
Path 2
Term Annotations click to browse term
  biological_process 17650
    biological regulation 11838
      regulation of biological process 11481
        regulation of response to stimulus 3826
          regulation of response to stress 1310
            regulation of cardiac muscle hypertrophy in response to stress + 11
            regulation of cellular response to stress + 489
            regulation of defense response + 767
            regulation of fear response + 17
            regulation of filamentous growth of a population of unicellular organisms in response to heat + 0
            regulation of filamentous growth of a population of unicellular organisms in response to starvation + 0
            regulation of response to osmotic stress + 16
            regulation of response to oxidative stress + 42
            regulation of response to water deprivation + 0
            regulation of response to wounding + 172
            regulation of stress response to copper ion + 0
            regulation of vernalization response + 0
paths to the root