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ONTOLOGY REPORT - ANNOTATIONS


Term:tRNA-splicing ligase complex
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Accession:GO:0072669 term browser browse the term
Definition:A protein complex that catalyzes the ligation of cleaved pre-tRNAs by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester.
Synonyms:xref: MetaCyc:ENTMULTI-CPLX



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tRNA-splicing ligase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C10H2orf49 chromosome 10 C2orf49 homolog part_of IBA
IEA
(PMID:21873635) GO_Central
GO_Central
InterPro
Ensembl
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr10:38,077,162...38,089,899
Ensembl chr10:38,080,267...38,089,850
JBrowse link
G DDX1 DEAD-box helicase 1 part_of IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:11,432,060...11,467,000
Ensembl chr17:11,432,136...11,466,990
JBrowse link
G FAM98B family with sequence similarity 98 member B part_of ISO (PMID:21311021), (PMID:24870230) UniProt PMID:21311021 PMID:24870230 NCBI chr30:5,802,656...5,839,256
Ensembl chr30:5,802,734...5,837,657
JBrowse link
G FAM98C family with sequence similarity 98 member C part_of IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:114,598,841...114,602,316
Ensembl chr 1:114,597,464...114,602,708
JBrowse link
G RTCB RNA 2',3'-cyclic phosphate and 5'-OH ligase part_of IBA
IEA
(PMID:21873635) GO_Central
GO_Central
UniProt
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000104 NCBI chr10:31,010,841...31,034,208
Ensembl chr10:31,010,878...31,033,229
JBrowse link
G RTRAF RNA transcription, translation and transport factor part_of IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 8:28,224,365...28,243,129 JBrowse link
G ZBTB8OS zinc finger and BTB domain containing 8 opposite strand part_of IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:68,660,419...68,684,336
Ensembl chr 2:68,660,975...68,682,440
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  cellular_component 16531
    protein-containing complex 5343
      intracellular protein-containing complex 745
        tRNA-splicing ligase complex 7
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