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ONTOLOGY REPORT - ANNOTATIONS


Term:tRNA-splicing ligase complex
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Accession:GO:0072669 term browser browse the term
Definition:A protein complex that catalyzes the ligation of cleaved pre-tRNAs by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester.
Synonyms:xref: MetaCyc:ENTMULTI-CPLX


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tRNA-splicing ligase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07053472.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:104,134,824...104,163,704 JBrowse link
G Ddx1 DEAD-box helicase 1 part_of ISS
ISO
GO_REF:0000024
(PMID:21311021), (PMID:24870230)
UniProt
RGD
PMID:21311021 PMID:24870230 GO_REF:0000024 NCBI chr 6:35,996,469...36,027,340
Ensembl chr 6:35,996,469...36,027,365
JBrowse link
G Fam98a family with sequence similarity 98, member A part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:19,874,082...19,888,744
Ensembl chr 6:19,874,071...19,888,742
JBrowse link
G Fam98b family with sequence similarity 98, member B part_of ISO (PMID:21311021), (PMID:24870230) RGD PMID:21311021 PMID:24870230 NCBI chr 3:104,134,759...104,164,249 JBrowse link
G Fam98c family with sequence similarity 98, member C part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:84,452,806...84,456,414
Ensembl chr 1:84,452,814...84,456,385
JBrowse link
G RGD1310553 similar to expressed sequence AI597479 part_of ISO
ISS
IBA
(PMID:21311021), (PMID:24870230)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:21311021 PMID:24870230 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 9:45,371,396...45,382,123
Ensembl chr 9:45,371,430...45,382,120
JBrowse link
G Rtcb RNA 2',3'-cyclic phosphate and 5'-OH ligase part_of ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:21311021), (PMID:24870230)
UniProt
RGD
PMID:21311021 PMID:24870230 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:17,907,786...17,927,134
Ensembl chr 7:17,907,705...17,927,132
JBrowse link
G Rtraf RNA transcription, translation and transport factor part_of ISO (PMID:21311021), (PMID:24870230) RGD PMID:21311021 PMID:24870230 NCBI chr15:4,447,243...4,457,973
Ensembl chr15:4,442,573...4,457,972
JBrowse link
G Zbtb8os zinc finger and BTB domain containing 8 opposite strand part_of ISO
IBA
(PMID:24870230)
PMID:21873635
RGD PMID:24870230 PMID:21873635 RGD:13792537 NCBI chr 5:141,675,502...141,687,148
Ensembl chr 5:141,675,857...141,688,660
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  cellular_component 20010
    protein-containing complex 6011
      intracellular protein-containing complex 775
        tRNA-splicing ligase complex 9
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