Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:protein localization to vacuole
go back to main search page
Accession:GO:0072665 term browser browse the term
Definition:A process in which a protein is transported to, or maintained at, a location in a vacuole.
Synonyms:exact_synonym: protein localisation to vacuole


show annotations for term's descendants           Sort by:
protein localization to vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbp1 guanylate binding protein 1 involved_in ISO (PMID:21151871) RGD PMID:21151871 NCBI chr 2:234,071,366...234,106,012
Ensembl chr 2:234,190,708...234,206,802
Ensembl chr 2:234,190,708...234,206,802 		JBrowse link
G Umod uromodulin acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:21081491) 		Ensembl
RGD		 PMID:21081491 GO_REF:0000107 NCBI chr 1:183,247,676...183,261,665
Ensembl chr 1:183,247,674...183,261,030 		JBrowse link
N-glycan processing to lysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnptab N-acetylglucosamine-1-phosphate transferase subunits alpha and beta involved_in ISO
IEA
IBA 		(PMID:19938078), (PMID:25505245)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:19938078 PMID:25505245 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:24,687,923...24,754,821
Ensembl chr 7:24,687,969...24,754,821 		JBrowse link
negative regulation of protein localization to lysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO
ISS
IEA 		(PMID:24529379)
GO_REF:0000024
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:24529379 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:137,535,390...137,552,610 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO
IEA 		(PMID:24305806)
GO_REF:0000107 		RGD
Ensembl		 PMID:24305806 GO_REF:0000107 NCBI chr 6:45,407,823...45,502,773
Ensembl chr 6:45,407,965...45,502,771 		JBrowse link
neurotransmitter receptor transport, postsynaptic endosome to lysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IBA
ISO
IEA 		GO_REF:0000033
(PMID:24217640)
GO_REF:0000107 		GO_Central
RGD
Ensembl		 PMID:24217640 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:9,620,909...9,656,350
Ensembl chr 7:9,620,968...9,656,342 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:122,019,281...122,068,067
Ensembl chr 4:121,983,938...122,064,185 		JBrowse link
positive regulation of protein localization to lysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr137b G protein-coupled receptor 137B involved_in ISO (PMID:31036939) RGD PMID:31036939 NCBI chr17:92,987,792...93,026,003
Ensembl chr17:92,942,559...93,025,911 		JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in ISO (PMID:28935770), (PMID:31001086) RGD PMID:28935770 PMID:31001086 NCBI chr 1:165,684,001...165,689,698
Ensembl chr 1:165,684,091...165,703,178 		JBrowse link
G Meak7 MTOR associated protein, eak-7 homolog involved_in ISO (PMID:29750193) RGD PMID:29750193 NCBI chr19:64,722,528...64,745,443
Ensembl chr19:64,722,528...64,751,330 		JBrowse link
G Nmt1 N-myristoyltransferase 1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:88,488,918...88,525,496
Ensembl chr10:88,488,990...88,522,729 		JBrowse link
G Zdhhc3 zinc finger DHHC-type palmitoyltransferase 3 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:131,602,663...131,650,998
Ensembl chr 8:131,602,663...131,650,998 		JBrowse link
protein localization to lysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase cation transporting 13A2 involved_in ISO
IEA 		(PMID:30538141)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:30538141 GO_REF:0000107 GO_REF:0000117 NCBI chr 5:158,575,727...158,595,157
Ensembl chr 5:158,575,749...158,595,156 		JBrowse link
G Cd81 Cd81 molecule involved_in ISO (PMID:25635054) RGD PMID:25635054 NCBI chr 1:207,665,274...207,681,094
Ensembl chr 1:207,664,885...207,681,092 		JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr14:81,956,777...82,087,392
Ensembl chr14:81,956,777...82,087,246 		JBrowse link
G Gga3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:25592972) 		Ensembl
RGD		 PMID:25592972 GO_REF:0000107 NCBI chr10:101,324,378...101,342,373
Ensembl chr10:101,324,378...101,342,373 		JBrowse link
G Glmp glycosylated lysosomal membrane protein involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:32959924)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:32959924 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:176,092,098...176,095,688
Ensembl chr 2:176,091,839...176,097,208 		JBrowse link
G Gpr155 G protein-coupled receptor 155 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:78,623,931...78,677,803
Ensembl chr 3:78,607,976...78,677,803 		JBrowse link
G Kics2 KICSTOR subunit 2 involved_in ISO
IBA 		(PMID:28199306)
GO_REF:0000033 		RGD
GO_Central		 PMID:28199306 GO_REF:0000033 NCBI chr 7:59,169,703...59,182,974
Ensembl chr 7:59,169,543...59,184,551 		JBrowse link
G Kptn kaptin (actin binding protein) involved_in ISO (PMID:28199306) RGD PMID:28199306 NCBI chr 1:85,936,922...85,937,716 JBrowse link
G Lamtor4 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 involved_in ISO
IEA 		(PMID:22980980)
GO_REF:0000107 		RGD
Ensembl		 PMID:22980980 GO_REF:0000107 NCBI chr12:22,372,269...22,376,090
Ensembl chr12:22,372,269...22,376,090 		JBrowse link
G Lamtor5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 involved_in ISO (PMID:22980980) RGD PMID:22980980 NCBI chr 2:197,588,242...197,593,598
Ensembl chr 2:197,588,242...197,593,598 		JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (PMID:22949502) RGD PMID:22949502 NCBI chr 5:148,371,880...148,393,927
Ensembl chr 5:148,339,435...148,393,927 		JBrowse link
G Lmbrd1 LMBR1 domain containing 1 involved_in ISO
IBA
ISS 		(PMID:27456980)
GO_REF:0000033
GO_REF:0000024 		RGD
GO_Central
UniProt		 PMID:27456980 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:34,592,723...34,674,425
Ensembl chr 9:34,577,616...34,674,428 		JBrowse link
G Mfsd1 major facilitator superfamily domain containing 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:32959924) 		Ensembl
RGD		 PMID:32959924 GO_REF:0000107 NCBI chr 2:154,156,167...154,176,209
Ensembl chr 2:154,156,166...154,177,086 		JBrowse link
G Nprl2 NPR2-like, GATOR1 complex subunit acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:117,094,443...117,097,639
Ensembl chr 8:117,094,441...117,097,637 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr  X:70,811,317...70,856,123
Ensembl chr  X:70,811,319...70,856,123 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:55,967,766...56,003,450
Ensembl chr 2:55,967,351...56,003,450 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:125,036,945...125,109,010
Ensembl chr 5:125,042,179...125,108,324 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:104,595,339...104,605,552
Ensembl chr 1:104,595,335...104,604,827 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in IEA
ISO 		GO_REF:0000107
(PMID:38538795) 		Ensembl
RGD		 PMID:38538795 GO_REF:0000107 NCBI chr 4:122,019,281...122,068,067
Ensembl chr 4:121,983,938...122,064,185 		JBrowse link
G Rptor regulatory associated protein of MTOR, complex 1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:105,376,943...105,675,416
Ensembl chr10:105,376,943...105,675,413 		JBrowse link
G Rraga Ras-related GTP binding A involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:31601708)
GO_REF:0000107 		RGD
Ensembl		 PMID:31601708 GO_REF:0000107 NCBI chr 5:106,159,335...106,160,930
Ensembl chr 5:106,158,853...106,160,504 		JBrowse link
G Rragc Ras-related GTP binding C involved_in ISO (PMID:31601708) RGD PMID:31601708 NCBI chr 5:141,433,014...141,452,546
Ensembl chr 5:141,433,040...141,452,548 		JBrowse link
G Rtn4 reticulon 4 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:25917084)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:25917084 GO_REF:0000024 GO_REF:0000107 NCBI chr14:107,651,001...107,698,610
Ensembl chr14:107,650,732...107,698,611 		JBrowse link
G Samtor S-adenosylmethionine sensor upstream of mTORC1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:42,847,720...42,911,546
Ensembl chr 4:42,836,172...42,917,567 		JBrowse link
G Sh3bp4 SH3-domain binding protein 4 involved_in ISO
IEA
ISS 		(PMID:22575674)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:22575674 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:97,107,877...97,186,878
Ensembl chr 9:97,107,877...97,186,878 		JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in ISO
IEA 		(PMID:28199306)
GO_REF:0000107 		RGD
Ensembl		 PMID:28199306 GO_REF:0000107 NCBI chr 5:137,182,648...137,229,349
Ensembl chr 5:137,182,648...137,229,419 		JBrowse link
G Wdr24 WD repeat domain 24 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:15,346,835...15,353,384
Ensembl chr10:15,348,241...15,353,582 		JBrowse link
G Ywhag tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr12:26,381,106...26,409,466
Ensembl chr12:26,380,816...26,409,465 		JBrowse link
protein localization to vacuolar membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 involved_in ISO
IEA 		(PMID:21068542)
GO_REF:0000107 		RGD
Ensembl		 PMID:21068542 GO_REF:0000107 NCBI chr 2:236,411,194...236,445,225
Ensembl chr 2:236,410,436...236,445,140 		JBrowse link
protein targeting to lysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO MGI:1856989 (PMID:14557411) RGD PMID:14557411 NCBI chr 2:27,331,241...27,535,683
Ensembl chr 2:27,334,900...27,537,702 		JBrowse link
G Ap4m1 adaptor related protein complex 4 subunit mu 1 involved_in ISO
IEA 		(PMID:11139587)
GO_REF:0000107 		RGD
Ensembl		 PMID:11139587 GO_REF:0000107 NCBI chr12:22,163,474...22,171,734
Ensembl chr12:22,163,466...22,171,731 		JBrowse link
G Gcc2 GRIP and coiled-coil domain containing 2 involved_in ISO
ISS 		(PMID:16885419)
GO_REF:0000024 		RGD
UniProt		 PMID:16885419 GO_REF:0000024 NCBI chr20:26,788,472...26,836,728
Ensembl chr20:26,790,516...26,836,726 		JBrowse link
G Gga3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 involved_in ISO
IEA 		UniProtKB:P46934 (PMID:17116753)
GO_REF:0000107 		RGD
Ensembl		 PMID:17116753 GO_REF:0000107 NCBI chr10:101,324,378...101,342,373
Ensembl chr10:101,324,378...101,342,373 		JBrowse link
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate involved_in ISO
IEA 		(PMID:18767904)
GO_REF:0000107 		RGD
Ensembl		 PMID:18767904 GO_REF:0000107 NCBI chr10:106,237,988...106,256,174
Ensembl chr10:106,237,824...106,256,174 		JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (PMID:18619870) RGD PMID:18619870 NCBI chr 5:148,371,880...148,393,927
Ensembl chr 5:148,339,435...148,393,927 		JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor IMP chorionic gonadotropin after receptor internalization RGD PMID:10847593 RGD:2292601 NCBI chr 6:11,415,361...11,480,834
Ensembl chr 6:11,415,415...11,478,061 		JBrowse link
G Lyset lysosomal enzyme trafficking factor acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:36074821) 		Ensembl
RGD		 PMID:36074821 GO_REF:0000107 NCBI chr 6:127,649,401...127,651,143
Ensembl chr 6:127,649,450...127,652,661 		JBrowse link
G M6pr mannose-6-phosphate receptor, cation dependent involved_in IEA
IBA 		GO_REF:0000002
GO_REF:0000033 		InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 4:157,173,154...157,182,293
Ensembl chr 4:157,173,125...157,182,277 		JBrowse link
G Ncoa4 nuclear receptor coactivator 4 acts_upstream_of_or_within ISO (PMID:25327288) RGD PMID:25327288 NCBI chr16:7,395,502...7,415,846
Ensembl chr16:7,401,802...7,415,840 		JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:28675177) 		Ensembl
RGD		 PMID:28675177 GO_REF:0000107 NCBI chr  X:8,379,569...8,404,019
Ensembl chr  X:8,379,569...8,406,802 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in ISO
IEA 		UniProtKB:Q9NZ52 (PMID:17116753)
GO_REF:0000107 		RGD
Ensembl		 PMID:17116753 GO_REF:0000107 NCBI chr 8:82,264,751...82,349,642
Ensembl chr 8:82,264,649...82,349,633 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO
IEA 		(PMID:22115783)
GO_REF:0000107 		RGD
Ensembl		 PMID:22115783 GO_REF:0000107 NCBI chr 4:122,019,281...122,068,067
Ensembl chr 4:121,983,938...122,064,185 		JBrowse link
G Scarb2 scavenger receptor class B, member 2 involved_in ISO
IBA
IEA 		(PMID:18022370)
(PMID:18022370), (PMID:25316793)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:18022370 PMID:25316793 GO_REF:0000033 GO_REF:0000107 NCBI chr14:15,842,583...15,894,123
Ensembl chr14:15,842,515...15,896,671 		JBrowse link
G Snx16 sorting nexin 16 involved_in ISO
IEA
ISS 		(PMID:12813048)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:12813048 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:93,242,779...93,265,048
Ensembl chr 2:93,243,494...93,265,050 		JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO
IEA
IBA 		(PMID:24523320)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:24523320 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:51,238,713...51,401,458
Ensembl chr 8:51,238,722...51,401,446 		JBrowse link
G Sort1 sortilin 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:4397584 (PMID:19732768) 		Ensembl
RGD		 PMID:19732768 GO_REF:0000107 NCBI chr 2:198,609,466...198,690,481
Ensembl chr 2:198,612,148...198,690,481 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO
IEA 		(PMID:16973552)
GO_REF:0000107 		RGD
Ensembl		 PMID:16973552 GO_REF:0000107 NCBI chr19:51,838,411...51,858,639
Ensembl chr19:51,833,914...51,872,423 		JBrowse link
G Vps53 VPS53 subunit of GARP complex involved_in IEA
ISO 		GO_REF:0000107
(PMID:28658628) 		Ensembl
RGD		 PMID:28658628 GO_REF:0000107 NCBI chr10:61,418,076...61,536,912
Ensembl chr10:61,418,076...61,531,760 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA
ISO 		GO_REF:0000107
MGI:1857091 (PMID:28658628), (PMID:32345721) 		Ensembl
RGD		 PMID:28658628 PMID:32345721 GO_REF:0000107 NCBI chr14:99,580,120...99,657,178
Ensembl chr14:99,580,148...99,657,164 		JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (PMID:20175130) RGD PMID:20175130 NCBI chr 9:113,169,730...113,179,829
Ensembl chr 9:113,168,259...113,179,835 		JBrowse link
G Zfyve16 zinc finger FYVE-type containing 16 involved_in ISO
IBA 		(PMID:11546807)
GO_REF:0000033 		RGD
GO_Central		 PMID:11546807 GO_REF:0000033 NCBI chr 2:25,448,264...25,495,180
Ensembl chr 2:25,448,829...25,483,295 		JBrowse link
protein targeting to lysosome involved in chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clu clusterin involved_in ISO
IEA 		(PMID:9228033)
GO_REF:0000107 		RGD
Ensembl		 PMID:9228033 GO_REF:0000107 NCBI chr15:44,336,619...44,375,861
Ensembl chr15:44,359,914...44,375,860 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISS
ISO 		GO_REF:0000024
(PMID:11559757), (PMID:26212789), (PMID:36586411) 		UniProt
RGD		 PMID:11559757 PMID:26212789 PMID:36586411 GO_REF:0000024 NCBI chr 8:50,080,514...50,084,376
Ensembl chr 8:50,080,199...50,084,372 		JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in
acts_upstream_of_or_within 		ISO
IEA
IBA
IGI
IMP
ISS 		(PMID:27628032)
GO_REF:0000117
GO_REF:0000033
GO_REF:0000107
PMID:18644871
GO_REF:0000024 		RGD
UniProt
GO_Central
Ensembl		 PMID:27628032 PMID:18644871 PMID:18644871 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:10412301, RGD:10412301 NCBI chr  X:122,038,734...122,087,745
Ensembl chr  X:121,922,187...122,087,675 		JBrowse link
protein targeting to vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,620,909...9,656,350
Ensembl chr 7:9,620,968...9,656,342 		JBrowse link
G Mon1a MON1 homolog A, secretory trafficking associated involved_in IEA GO_REF:0000104
GO_REF:0000002 		UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 8:117,452,868...117,471,780
Ensembl chr 8:117,452,936...117,471,768 		JBrowse link
G Mon1b MON1 homolog B, secretory trafficking associated involved_in IEA GO_REF:0000104
GO_REF:0000002 		UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr19:58,526,503...58,534,478
Ensembl chr19:58,526,326...58,533,950 		JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:115,146,660...115,195,326
Ensembl chr 8:115,146,687...115,195,326 		JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:223,328,784...223,555,500
Ensembl chr 1:223,328,784...223,555,331 		JBrowse link
G Vps13c vacuolar protein sorting 13 homolog C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:77,359,499...77,533,009
Ensembl chr 8:77,359,504...77,531,871 		JBrowse link
G Vps13d vacuolar protein sorting 13 homolog D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:162,113,732...162,339,121
Ensembl chr 5:162,113,732...162,339,099 		JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:38,220,973...38,249,935
Ensembl chr12:38,220,959...38,249,935 		JBrowse link
G Vps37c VPS37C subunit of ESCRT-I involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:216,760,675...216,787,198
Ensembl chr 1:216,761,612...216,787,203 		JBrowse link
G Vps37d VPS37D subunit of ESCRT-I involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:27,245,755...27,251,214
Ensembl chr12:27,245,625...27,251,213 		JBrowse link
G Vps41 VPS41 subunit of HOPS complex involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr17:50,758,732...50,923,129
Ensembl chr17:50,758,734...50,923,133 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA
ISO 		GO_REF:0000107
MGI:1857091 (PMID:23708095) 		Ensembl
RGD		 PMID:23708095 GO_REF:0000107 NCBI chr14:99,580,120...99,657,178
Ensembl chr14:99,580,148...99,657,164 		JBrowse link
G Vps8 VPS8 subunit of CORVET complex involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr11:92,906,702...93,140,844
Ensembl chr11:92,906,700...93,138,570 		JBrowse link
protein targeting to vacuole involved in autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ate1 arginyltransferase 1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:194,391,843...194,514,284
Ensembl chr 1:194,391,843...194,511,348 		JBrowse link
G Hdac6 histone deacetylase 6 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr  X:17,222,538...17,244,373
Ensembl chr  X:17,222,856...17,244,370 		JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:29420192) RGD PMID:29420192 NCBI chr10:33,734,640...33,742,720
Ensembl chr10:33,732,961...33,743,228 		JBrowse link
G Kat5 lysine acetyltransferase 5 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:212,325,090...212,332,587 		JBrowse link
G Kcmf1 potassium channel modulatory factor 1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:106,447,974...106,508,359
Ensembl chr 4:106,447,981...106,508,359 		JBrowse link
G Lypla1 lysophospholipase 1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:19,477,408...19,506,568
Ensembl chr 5:19,477,409...19,506,522 		JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO
IEA 		(PMID:22020285)
GO_REF:0000107 		RGD
Ensembl		 PMID:22020285 GO_REF:0000107 NCBI chr12:14,748,717...14,840,273
Ensembl chr12:14,749,043...14,840,273 		JBrowse link
G Sqstm1 sequestosome 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:27498865), (PMID:30612879), (PMID:32715615), (PMID:34893540), (PMID:36221902), (PMID:37802024)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:27498865 PMID:30612879 PMID:32715615 PMID:34893540 PMID:36221902 More... GO_REF:0000024 GO_REF:0000107 NCBI chr10:35,026,598...35,037,750
Ensembl chr10:35,026,598...35,037,750 		JBrowse link
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:156,919,029...157,027,127
Ensembl chr 5:156,919,085...157,027,127 		JBrowse link
G Zdhhc19 zinc finger DHHC-type palmitoyltransferase 19 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:81,782,899...81,794,105
Ensembl chr11:81,782,903...81,794,008 		JBrowse link
protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:119,239,213...119,261,675
Ensembl chr 8:119,239,213...119,261,675 		JBrowse link
G Snf8 SNF8 subunit of ESCRT-II involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:81,481,054...81,493,430
Ensembl chr10:81,481,057...81,494,610 		JBrowse link
G Stam signal transducing adaptor molecule involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:82,028,779...82,074,717
Ensembl chr17:82,028,703...82,075,013 		JBrowse link
G Vps25 vacuolar protein sorting 25 homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:86,696,330...86,701,871
Ensembl chr10:86,696,157...86,701,871 		JBrowse link
G Vps28 VPS28 subunit of ESCRT-I involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:110,222,638...110,226,486
Ensembl chr 7:110,222,638...110,225,569 		JBrowse link
G Vps36 vacuolar protein sorting 36 homolog involved_in IEA
IBA 		GO_REF:0000104
GO_REF:0000033 		UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr16:76,512,851...76,537,235
Ensembl chr16:76,512,860...76,537,246 		JBrowse link
regulation of protein targeting to vacuolar membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vamp7 vesicle-associated membrane protein 7 acts_upstream_of_or_within ISO (PMID:18227281) RGD PMID:18227281 NCBI chr12:21,842,206...21,958,556
Ensembl chr12:21,842,228...21,958,552 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    localization 5709
      macromolecule localization 3146
        intracellular protein localization 2646
          protein localization to organelle 955
            protein localization to vacuole 90
              maintenance of protein location in vacuole 0
              protein localization to lysosome + 59
              protein localization to vacuolar membrane + 2
              protein targeting to vacuole + 49
              protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway 6
paths to the root