ONTOLOGY REPORT - ANNOTATIONS
Term: pyrimidine-containing compound biosynthetic process
Accession: GO:0072528
browse the term
Definition: The chemical reactions and pathways resulting in the formation of a pyrimidine-containing compound, i.e. any compound that contains pyrimidine or a formal derivative thereof.
Synonyms: exact_synonym: pyrimidine and derivative biosynthetic process; pyrimidine-containing compound anabolism; pyrimidine-containing compound biosynthesis; pyrimidine-containing compound formation; pyrimidine-containing compound synthesis
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Ctps1
CTP synthase 1
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr 5:139,475,934...139,505,065
Ensembl chr 5:139,475,934...139,505,065
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Ctps2
CTP synthase 2
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr X:33,383,087...33,522,852
Ensembl chr X:33,383,087...33,522,836
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Cad
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
involved_in
IDA IBA ISO
PMID:21873635 (PMID:24332717)
RGD
PMID:24332717 , PMID:1476792 , PMID:21873635 , PMID:21873635
RGD:5132591 , RGD:13792537 , RGD:13792537
NCBI chr 6:26,657,507...26,680,459
Ensembl chr 6:26,657,780...26,680,284
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Cmpk1
cytidine/uridine monophosphate kinase 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:133,759,722...133,786,452
Ensembl chr 5:133,759,735...133,786,452
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Cps1
carbamoyl-phosphate synthase 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 9:74,113,437...74,236,274
Ensembl chr 9:74,124,016...74,236,274
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Dhodh
dihydroorotate dehydrogenase (quinone)
involved_in
IDA IBA
PMID:21873635
RGD GO_Central
PMID:1476792 , PMID:21873635 , PMID:21873635
RGD:5132591 , RGD:13792537 , RGD:13792537
NCBI chr19:42,066,103...42,087,906
Ensembl chr19:42,066,351...42,082,012
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Mtor
mechanistic target of rapamycin kinase
involved_in
ISO
(MGI:5469988|PMID:23429704)
RGD
PMID:23429704
MGI:5469988
NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
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Umps
uridine monophosphate synthetase
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr11:70,034,181...70,044,590
Ensembl chr11:70,034,139...70,044,628
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Cad
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr 6:26,657,507...26,680,459
Ensembl chr 6:26,657,780...26,680,284
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Dhodh
dihydroorotate dehydrogenase (quinone)
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr19:42,066,103...42,087,906
Ensembl chr19:42,066,351...42,082,012
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Umps
uridine monophosphate synthetase
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr11:70,034,181...70,044,590
Ensembl chr11:70,034,139...70,044,628
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Cmpk1
cytidine/uridine monophosphate kinase 1
involved_in
IDA IBA
PMID:21873635
RGD GO_Central
PMID:3010881 , PMID:21873635 , PMID:21873635
RGD:5133253 , RGD:13792537 , RGD:13792537
NCBI chr 5:133,759,722...133,786,452
Ensembl chr 5:133,759,735...133,786,452
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Ctps1
CTP synthase 1
involved_in
ISO IBA
(PMID:16179339), (PMID:24870241) PMID:21873635
RGD
PMID:16179339 PMID:24870241 , PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr 5:139,475,934...139,505,065
Ensembl chr 5:139,475,934...139,505,065
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Ctps2
CTP synthase 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr X:33,383,087...33,522,852
Ensembl chr X:33,383,087...33,522,836
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Decr2
2,4-dienoyl-CoA reductase 2
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:15,451,850...15,460,227
Ensembl chr10:15,431,638...15,465,413
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Nme1
NME/NM23 nucleoside diphosphate kinase 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:81,657,152...81,666,542
Ensembl chr10:81,657,153...81,666,523
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Nme2
NME/NM23 nucleoside diphosphate kinase 2
IDA
RGD
PMID:1316151
RGD:729254
NCBI chr10:81,648,216...81,653,717
Ensembl chr10:81,648,216...81,653,717
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Nme3
NME/NM23 nucleoside diphosphate kinase 3
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:14,258,232...14,259,365
Ensembl chr10:14,258,380...14,259,336
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Nme4
NME/NM23 nucleoside diphosphate kinase 4
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:15,461,567...15,465,422
Ensembl chr10:15,431,638...15,465,413
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Nme5
NME/NM23 family member 5
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr18:27,357,460...27,374,641
Ensembl chr18:27,357,413...27,374,603
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Nme6
NME/NM23 nucleoside diphosphate kinase 6
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 8:117,920,912...117,928,148
Ensembl chr 8:117,920,944...117,928,195
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Nme7
NME/NM23 family member 7
involved_in
IEA
GO_REF:0000002 GO_REF:0000104
InterPro UniProt
GO_REF:0000002 GO_REF:0000104
NCBI chr13:82,607,844...82,737,383
Ensembl chr13:82,626,685...82,737,343
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Uck1
uridine-cytidine kinase 1
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr 3:11,271,874...11,277,757
Ensembl chr 3:11,271,885...11,277,757
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Uck2
uridine-cytidine kinase 2
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr13:85,376,716...85,443,976
Ensembl chr13:85,376,716...85,443,976
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Uckl1
uridine-cytidine kinase 1-like 1
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr 3:177,066,022...177,078,611
Ensembl chr 3:177,066,014...177,078,594
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Cmpk1
cytidine/uridine monophosphate kinase 1
IDA
RGD
PMID:192455
RGD:5133256
NCBI chr 5:133,759,722...133,786,452
Ensembl chr 5:133,759,735...133,786,452
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Cmpk2
cytidine/uridine monophosphate kinase 2
involved_in
IDA IBA
PMID:21873635
RGD GO_Central
PMID:192455 , PMID:21873635 , PMID:21873635
RGD:5133256 , RGD:13792537 , RGD:13792537
NCBI chr 6:45,683,242...45,694,824
Ensembl chr 6:45,683,234...45,694,822
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Dtymk
deoxythymidylate kinase
acts_upstream_of_or_within involved_in
IDA ISO IBA
(MGI:77260|PMID:8845311) PMID:21873635
RGD
PMID:8845311 , PMID:220041 , PMID:21873635 , PMID:21873635
MGI:77260 , RGD:5133687 , RGD:13792537 , RGD:13792537
NCBI chr 9:100,921,565...100,930,399
Ensembl chr 9:100,921,565...100,930,399
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Dctd
dCMP deaminase
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr16:47,177,144...47,222,850
Ensembl chr16:47,177,145...47,208,110
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Shmt1
serine hydroxymethyltransferase 1
involved_in
ISO
(MGI:3849912|PMID:19513116)
RGD
PMID:19513116
MGI:3849912
NCBI chr10:47,030,813...47,059,216
Ensembl chr10:47,031,050...47,059,216
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Tyms
thymidylate synthetase
involved_in
IDA IBA ISO
PMID:21873635 (PMID:11278511), (PMID:15093541), (PMID:8845352)
RGD
PMID:8845352 PMID:11278511 PMID:15093541 , PMID:9894005 , PMID:21873635 , PMID:21873635
RGD:1545055 , RGD:13792537 , RGD:13792537
NCBI chr 9:121,918,875...121,931,564
Ensembl chr 9:121,918,947...121,931,564
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Cmpk2
cytidine/uridine monophosphate kinase 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr 6:45,683,242...45,694,824
Ensembl chr 6:45,683,234...45,694,822
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Dtymk
deoxythymidylate kinase
involved_in
IDA IBA
PMID:21873635
RGD GO_Central
PMID:220041 , PMID:21873635 , PMID:21873635
RGD:5133687 , RGD:13792537 , RGD:13792537
NCBI chr 9:100,921,565...100,930,399
Ensembl chr 9:100,921,565...100,930,399
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Tbpl1
TATA-box binding protein like 1
acts_upstream_of_or_within
ISO
MGI:2182539 (MGI:2159505|PMID:11861477)
RGD
PMID:11861477
MGI:2159505
NCBI chr 1:23,977,154...24,002,512
Ensembl chr 1:23,977,688...24,002,506
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Tyms
thymidylate synthetase
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr 9:121,918,875...121,931,564
Ensembl chr 9:121,918,947...121,931,564
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Cmpk1
cytidine/uridine monophosphate kinase 1
IDA
RGD
PMID:3010881
RGD:5133253
NCBI chr 5:133,759,722...133,786,452
Ensembl chr 5:133,759,735...133,786,452
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Cmpk2
cytidine/uridine monophosphate kinase 2
involved_in
IDA IBA
PMID:21873635
RGD GO_Central
PMID:192455 , PMID:21873635 , PMID:21873635
RGD:5133256 , RGD:13792537 , RGD:13792537
NCBI chr 6:45,683,242...45,694,824
Ensembl chr 6:45,683,234...45,694,822
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Dtymk
deoxythymidylate kinase
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr 9:100,921,565...100,930,399
Ensembl chr 9:100,921,565...100,930,399
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AABR07001512.1
involved_in
IEA IBA
GO_REF:0000041 PMID:21873635
UniProt
PMID:21873635 , PMID:21873635
GO_REF:0000041, RGD:13792537 , RGD:13792537
Ensembl chr 1:48,565,160...48,565,711
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Dctd
dCMP deaminase
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr16:47,177,144...47,222,850
Ensembl chr16:47,177,145...47,208,110
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Dut
deoxyuridine triphosphatase
involved_in
IDA IEA IBA
GO_REF:0000041 PMID:21873635
UniProt
PMID:3032103 , PMID:21873635 , PMID:21873635 , PMID:1315924
GO_REF:0000041, RGD:2300191 , RGD:13792537 , RGD:13792537 , RGD:2301218
NCBI chr 3:117,514,399...117,525,450
Ensembl chr 3:117,514,444...117,525,446
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Ctps1
CTP synthase 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr 5:139,475,934...139,505,065
Ensembl chr 5:139,475,934...139,505,065
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Ctps2
CTP synthase 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr X:33,383,087...33,522,852
Ensembl chr X:33,383,087...33,522,836
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Umps
uridine monophosphate synthetase
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr11:70,034,181...70,044,590
Ensembl chr11:70,034,139...70,044,628
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Cmpk1
cytidine/uridine monophosphate kinase 1
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr 5:133,759,722...133,786,452
Ensembl chr 5:133,759,735...133,786,452
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Dhodh
dihydroorotate dehydrogenase (quinone)
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr19:42,066,103...42,087,906
Ensembl chr19:42,066,351...42,082,012
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Tpk1
thiamin pyrophosphokinase 1
involved_in
IEA IBA
GO_REF:0000041 PMID:21873635
UniProt
PMID:21873635 , PMID:21873635
GO_REF:0000041, RGD:13792537 , RGD:13792537
NCBI chr 4:72,792,252...73,174,179
Ensembl chr 4:72,792,252...73,174,179
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Cmpk1
cytidine/uridine monophosphate kinase 1
involved_in
IDA IBA
PMID:21873635
RGD GO_Central
PMID:3010881 , PMID:21873635 , PMID:21873635
RGD:5133253 , RGD:13792537 , RGD:13792537
NCBI chr 5:133,759,722...133,786,452
Ensembl chr 5:133,759,735...133,786,452
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Umps
uridine monophosphate synthetase
involved_in
IDA ISO IBA
(PMID:11730338), (PMID:6893554) PMID:21873635
RGD
PMID:6893554 PMID:11730338 , PMID:6134725 , PMID:21873635 , PMID:21873635
RGD:5132277 , RGD:13792537 , RGD:13792537
NCBI chr11:70,034,181...70,044,590
Ensembl chr11:70,034,139...70,044,628
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Uprt
uracil phosphoribosyltransferase homolog
IDA
RGD
PMID:1476792
RGD:5132591
NCBI chr X:75,382,553...75,408,541
Ensembl chr X:75,382,598...75,407,217
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Uck1
uridine-cytidine kinase 1
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr 3:11,271,874...11,277,757
Ensembl chr 3:11,271,885...11,277,757
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Uck2
uridine-cytidine kinase 2
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr13:85,376,716...85,443,976
Ensembl chr13:85,376,716...85,443,976
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Uckl1
uridine-cytidine kinase 1-like 1
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr 3:177,066,022...177,078,611
Ensembl chr 3:177,066,014...177,078,594
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Upp1
uridine phosphorylase 1
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr14:89,314,234...89,334,060
Ensembl chr14:89,314,176...89,334,276
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Upp2
uridine phosphorylase 2
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr 3:44,806,106...44,846,464
Ensembl chr 3:44,806,106...44,846,464
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Cad
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
involved_in
IDA IBA
PMID:21873635
RGD GO_Central
PMID:10659854 , PMID:21873635 , PMID:21873635
RGD:2303528 , RGD:13792537 , RGD:13792537
NCBI chr 6:26,657,507...26,680,459
Ensembl chr 6:26,657,780...26,680,284
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Decr2
2,4-dienoyl-CoA reductase 2
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:15,451,850...15,460,227
Ensembl chr10:15,431,638...15,465,413
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Nme1
NME/NM23 nucleoside diphosphate kinase 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:81,657,152...81,666,542
Ensembl chr10:81,657,153...81,666,523
G
Nme2
NME/NM23 nucleoside diphosphate kinase 2
IDA
RGD
PMID:1316151
RGD:729254
NCBI chr10:81,648,216...81,653,717
Ensembl chr10:81,648,216...81,653,717
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Nme3
NME/NM23 nucleoside diphosphate kinase 3
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:14,258,232...14,259,365
Ensembl chr10:14,258,380...14,259,336
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Nme4
NME/NM23 nucleoside diphosphate kinase 4
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:15,461,567...15,465,422
Ensembl chr10:15,431,638...15,465,413
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Nme5
NME/NM23 family member 5
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr18:27,357,460...27,374,641
Ensembl chr18:27,357,413...27,374,603
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Nme6
NME/NM23 nucleoside diphosphate kinase 6
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 8:117,920,912...117,928,148
Ensembl chr 8:117,920,944...117,928,195
G
Nme7
NME/NM23 family member 7
involved_in
IEA
GO_REF:0000002 GO_REF:0000104
InterPro UniProt
GO_REF:0000002 GO_REF:0000104
NCBI chr13:82,607,844...82,737,383
Ensembl chr13:82,626,685...82,737,343
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all