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ONTOLOGY REPORT - ANNOTATIONS


Term:pyrimidine-containing compound metabolic process
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Accession:GO:0072527 term browser browse the term
Definition:The chemical reactions and pathways involving a pyrimidine-containing compound, i.e. any compound that contains pyrimidine or a formal derivative thereof.
Synonyms:exact_synonym: pyrimidine and derivative metabolic process;   pyrimidine-containing compound metabolism


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'de novo' CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 IEA UniProtKB GO_REF:0000041 NCBI chr 1:40,979,696...41,012,565
Ensembl chr 1:40,979,688...41,012,565
JBrowse link
G CTPS2 CTP synthase 2 IEA UniProtKB GO_REF:0000041 NCBI chr  X:16,587,999...16,712,917
Ensembl chr  X:16,587,999...16,712,936
JBrowse link
'de novo' pyrimidine nucleobase biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IEA
IBA
ISS
IDA
(PMID:21873635)
(PMID:24332717)
InterPro
GO_Central
BHF-UCL
UniProtKB
PMID:21873635, PMID:24332717 GO_REF:0000002, GO_REF:0000024 NCBI chr 2:27,217,369...27,243,943
Ensembl chr 2:27,217,369...27,243,943
JBrowse link
G CMPK1 cytidine/uridine monophosphate kinase 1 IEA InterPro GO_REF:0000002 NCBI chr 1:47,333,790...47,378,839
Ensembl chr 1:47,333,797...47,378,839
JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 IEA InterPro GO_REF:0000002 NCBI chr 2:210,477,685...210,679,107
Ensembl chr 2:210,477,682...210,679,107
JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr16:72,008,744...72,027,659
Ensembl chr16:72,008,588...72,027,664
JBrowse link
G MTOR mechanistic target of rapamycin kinase IEA Ensembl GO_REF:0000107 NCBI chr 1:11,106,535...11,273,497
Ensembl chr 1:11,106,535...11,262,551
JBrowse link
G UMPS uridine monophosphate synthetase IEA InterPro GO_REF:0000002 NCBI chr 3:124,730,442...124,749,273
Ensembl chr 3:124,730,433...124,749,273
JBrowse link
'de novo' UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IEA UniProtKB GO_REF:0000041 NCBI chr 2:27,217,369...27,243,943
Ensembl chr 2:27,217,369...27,243,943
JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) IEA UniProtKB GO_REF:0000041 NCBI chr16:72,008,744...72,027,659
Ensembl chr16:72,008,588...72,027,664
JBrowse link
G UMPS uridine monophosphate synthetase IEA UniProtKB GO_REF:0000041 NCBI chr 3:124,730,442...124,749,273
Ensembl chr 3:124,730,433...124,749,273
JBrowse link
5-methylcytosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TET1 tet methylcytosine dioxygenase 1 IEA InterPro GO_REF:0000002 NCBI chr10:68,560,337...68,700,794
Ensembl chr10:68,560,337...68,694,487
JBrowse link
G TET2 tet methylcytosine dioxygenase 2 IDA
IEA
(PMID:24315485) UniProtKB
UniProt
PMID:24315485 GO_REF:0000104 NCBI chr 4:105,145,875...105,279,803
Ensembl chr 4:105,145,875...105,279,816
JBrowse link
G TET3 tet methylcytosine dioxygenase 3 IEA InterPro
UniProt
GO_REF:0000002, GO_REF:0000104 NCBI chr 2:73,982,036...74,135,394
Ensembl chr 2:73,986,404...74,108,176
JBrowse link
5-methylcytosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TET2 tet methylcytosine dioxygenase 2 ISO (MGI:5298314|PMID:21803851) MGI PMID:21803851 MGI:5298314 NCBI chr 4:105,145,875...105,279,803
Ensembl chr 4:105,145,875...105,279,816
JBrowse link
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:47,333,790...47,378,839
Ensembl chr 1:47,333,797...47,378,839
JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 IDA
IBA
IMP
(PMID:16179339)
(PMID:21873635)
(PMID:24870241)
UniProtKB
GO_Central
PMID:16179339, PMID:21873635, PMID:24870241 NCBI chr 1:40,979,696...41,012,565
Ensembl chr 1:40,979,688...41,012,565
JBrowse link
G CTPS2 CTP synthase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:16,587,999...16,712,917
Ensembl chr  X:16,587,999...16,712,936
JBrowse link
G NME1 NME/NM23 nucleoside diphosphate kinase 1 IEA InterPro GO_REF:0000002 NCBI chr17:51,153,559...51,162,168
Ensembl chr17:51,153,559...51,162,428
Ensembl chr17:51,153,559...51,162,428
JBrowse link
G NME1-NME2 NME1-NME2 readthrough IEA InterPro
Ensembl
GO_REF:0000002, GO_REF:0000107 NCBI chr17:51,153,559...51,171,744
Ensembl chr17:51,153,590...51,171,744
JBrowse link
G NME2 NME/NM23 nucleoside diphosphate kinase 2 IEA InterPro
Ensembl
GO_REF:0000002, GO_REF:0000107 NCBI chr17:51,165,536...51,171,744
Ensembl chr17:51,165,435...51,171,744
Ensembl chr17:51,165,435...51,171,744
JBrowse link
G NME2P1 NME2 pseudogene 1 IEA InterPro GO_REF:0000002 NCBI chr12:120,282,218...120,282,856
Ensembl chr12:120,282,303...120,282,716
JBrowse link
G NME3 NME/NM23 nucleoside diphosphate kinase 3 IEA InterPro GO_REF:0000002 NCBI chr16:1,770,320...1,771,750
Ensembl chr16:1,770,286...1,771,730
JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 IEA InterPro GO_REF:0000002 NCBI chr16:396,729...400,754
Ensembl chr16:396,725...410,367
JBrowse link
G NME5 NME/NM23 family member 5 IEA InterPro GO_REF:0000002 NCBI chr 5:138,115,175...138,139,471
Ensembl chr 5:138,115,175...138,139,443
JBrowse link
G NME6 NME/NM23 nucleoside diphosphate kinase 6 IEA InterPro GO_REF:0000002 NCBI chr 3:48,288,402...48,302,904
Ensembl chr 3:48,290,722...48,301,685
JBrowse link
G NME7 NME/NM23 family member 7 IEA InterPro
UniProt
GO_REF:0000002, GO_REF:0000104 NCBI chr 1:169,132,531...169,367,797
Ensembl chr 1:169,132,531...169,367,948
JBrowse link
G NME9 NME/NM23 family member 9 IEA InterPro GO_REF:0000002 NCBI chr 3:138,261,436...138,331,785
Ensembl chr 3:138,261,437...138,329,886
JBrowse link
CTP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UCK1 uridine-cytidine kinase 1 IEA UniProtKB GO_REF:0000041 NCBI chr 9:131,523,801...131,531,263
Ensembl chr 9:131,523,801...131,531,264
JBrowse link
G UCK2 uridine-cytidine kinase 2 IEA UniProtKB GO_REF:0000041 NCBI chr 1:165,827,614...165,911,618
Ensembl chr 1:165,827,614...165,911,618
JBrowse link
G UCKL1 uridine-cytidine kinase 1 like 1 IEA UniProtKB GO_REF:0000041 NCBI chr20:63,939,829...63,956,447
Ensembl chr20:63,939,829...63,956,416
JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase IEA Ensembl GO_REF:0000107 NCBI chr12:8,602,170...8,612,970
Ensembl chr12:8,602,170...8,612,867
JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 IEA GOC GO_REF:0000108 NCBI chr12:7,649,400...7,670,599
Ensembl chr12:7,649,400...7,665,908
JBrowse link
G APOBEC2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 IEA GOC GO_REF:0000108 NCBI chr 6:41,053,202...41,064,891
Ensembl chr 6:41,053,304...41,064,511
JBrowse link
G APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A IEA GOC GO_REF:0000108 NCBI chr22:38,957,609...38,963,184
Ensembl chr22:38,952,741...38,992,778
JBrowse link
G APOBEC3A_B APOBEC3A and APOBEC3B deletion hybrid IEA GOC GO_REF:0000108 Ensembl chr22:38,952,741...38,992,778 JBrowse link
G APOBEC3B apolipoprotein B mRNA editing enzyme catalytic subunit 3B IEA GOC GO_REF:0000108 NCBI chr22:38,982,347...38,992,779
Ensembl chr22:38,982,347...38,992,804
JBrowse link
G APOBEC3C apolipoprotein B mRNA editing enzyme catalytic subunit 3C IDA (PMID:21632763) UniProtKB PMID:21632763 NCBI chr22:39,014,236...39,020,352
Ensembl chr22:39,014,257...39,020,352
JBrowse link
G APOBEC3D apolipoprotein B mRNA editing enzyme catalytic subunit 3D IEA GOC GO_REF:0000108 NCBI chr22:39,021,127...39,033,277
Ensembl chr22:39,021,113...39,033,277
JBrowse link
G APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F IEA GOC GO_REF:0000108 NCBI chr22:39,019,081...39,055,972
Ensembl chr22:39,040,604...39,055,972
JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G IDA (PMID:16378963) UniProtKB PMID:16378963 NCBI chr22:39,077,005...39,087,743
Ensembl chr22:39,077,067...39,087,743
JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H IEA GOC GO_REF:0000108 NCBI chr22:39,097,203...39,104,067
Ensembl chr22:39,097,224...39,104,067
JBrowse link
G CDA cytidine deaminase IDA
IBA
(PMID:9596658)
(PMID:21873635)
UniProtKB
GO_Central
PMID:9596658, PMID:21873635 NCBI chr 1:20,589,097...20,618,903
Ensembl chr 1:20,589,086...20,618,903
JBrowse link
G CDADC1 cytidine and dCMP deaminase domain containing 1 IDA (PMID:26945630) UniProtKB PMID:26945630 NCBI chr13:49,247,875...49,293,486
Ensembl chr13:49,247,925...49,293,485
JBrowse link
cytosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDA cytidine deaminase TAS (PMID:7923172) UniProtKB PMID:7923172 NCBI chr 1:20,589,097...20,618,903
Ensembl chr 1:20,589,086...20,618,903
JBrowse link
G MAPK1 mitogen-activated protein kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr22:21,759,657...21,867,680
Ensembl chr22:21,754,500...21,867,680
Ensembl chr22:21,754,500...21,867,680
JBrowse link
G TET2 tet methylcytosine dioxygenase 2 ISO (MGI:5298314|PMID:21803851) MGI PMID:21803851 MGI:5298314 NCBI chr 4:105,145,875...105,279,803
Ensembl chr 4:105,145,875...105,279,816
JBrowse link
dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:192455 RGD:5133256 NCBI chr 1:47,333,790...47,378,839
Ensembl chr 1:47,333,797...47,378,839
JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 IMP
IBA
(PMID:24467396)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:24467396 NCBI chr16:30,423,615...30,430,030
Ensembl chr16:30,423,615...30,430,030
JBrowse link
deoxycytidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCK deoxycytidine kinase ISO RGD PMID:7686601, PMID:8305745 RGD:2300395, RGD:2300398 NCBI chr 4:70,993,649...71,030,914
Ensembl chr 4:70,992,538...71,030,914
JBrowse link
G TK2 thymidine kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr16:66,508,003...66,550,291
Ensembl chr16:66,508,003...66,552,544
JBrowse link
depyrimidination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MBD4 methyl-CpG binding domain 4, DNA glycosylase TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr 3:129,430,947...129,440,029
Ensembl chr 3:129,430,944...129,440,179
JBrowse link
G NEIL1 nei like DNA glycosylase 1 TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr15:75,346,638...75,357,115
Ensembl chr15:75,346,955...75,357,115
JBrowse link
G NEIL2 nei like DNA glycosylase 2 TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr 8:11,769,710...11,787,345
Ensembl chr 8:11,769,639...11,787,345
JBrowse link
G NTHL1 nth like DNA glycosylase 1 TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr16:2,039,820...2,047,834
Ensembl chr16:2,039,815...2,047,866
JBrowse link
G OGG1 8-oxoguanine DNA glycosylase TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr 3:9,749,952...9,788,246
Ensembl chr 3:9,749,944...9,788,219
JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr12:54,121,274...54,188,985
Ensembl chr12:54,121,277...54,189,008
JBrowse link
G TDG thymine DNA glycosylase TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr12:103,965,842...103,988,874
Ensembl chr12:103,965,822...103,988,874
JBrowse link
G UNG uracil DNA glycosylase TAS Reactome Reactome:R-HSA-110328, Reactome:R-HSA-110329 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,574...109,110,992
Ensembl chr12:109,097,574...109,110,992
JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK2 cytidine/uridine monophosphate kinase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:6,840,417...6,866,635
Ensembl chr 2:6,840,570...6,866,635
JBrowse link
G DTYMK deoxythymidylate kinase IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 2:241,675,747...241,686,815
Ensembl chr 2:241,675,747...241,686,944
JBrowse link
dTMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTD dCMP deaminase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:182,890,091...182,917,611
Ensembl chr 4:182,890,060...182,917,936
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr17:18,327,873...18,363,560
Ensembl chr17:18,327,860...18,363,563
JBrowse link
G TYMS thymidylate synthetase IDA
IBA
(PMID:11278511), (PMID:15093541), (PMID:8845352)
(PMID:21873635)
CAFA
GO_Central
PMID:8845352, PMID:11278511, PMID:15093541, PMID:21873635 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578
JBrowse link
dTTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK2 cytidine/uridine monophosphate kinase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:6,840,417...6,866,635
Ensembl chr 2:6,840,570...6,866,635
JBrowse link
G DTYMK deoxythymidylate kinase IEA
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr 2:241,675,747...241,686,815
Ensembl chr 2:241,675,747...241,686,944
JBrowse link
G TBPL1 TATA-box binding protein like 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:133,952,174...133,990,432
Ensembl chr 6:133,952,170...133,990,432
JBrowse link
G TYMS thymidylate synthetase IEA UniProtKB GO_REF:0000041 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578
JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 NOT IMP (PMID:24467396) UniProtKB PMID:24467396 NCBI chr16:30,423,615...30,430,030
Ensembl chr16:30,423,615...30,430,030
JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chr 1:47,333,790...47,378,839
Ensembl chr 1:47,333,797...47,378,839
JBrowse link
G CMPK2 cytidine/uridine monophosphate kinase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:6,840,417...6,866,635
Ensembl chr 2:6,840,570...6,866,635
JBrowse link
G DTYMK deoxythymidylate kinase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:241,675,747...241,686,815
Ensembl chr 2:241,675,747...241,686,944
JBrowse link
dUMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AL353753.1 putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:26,066,675...26,126,108
Ensembl chr 9:26,066,675...26,118,408
JBrowse link
G DCTD dCMP deaminase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:182,890,091...182,917,611
Ensembl chr 4:182,890,060...182,917,936
JBrowse link
G DUT deoxyuridine triphosphatase IEA
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr15:48,329,991...48,343,373
Ensembl chr15:48,331,011...48,343,373
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5M 5',3'-nucleotidase, mitochondrial IEA Ensembl GO_REF:0000107 NCBI chr17:17,303,373...17,347,663
Ensembl chr17:17,303,335...17,347,663
JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AL353753.1 putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:26,066,675...26,126,108
Ensembl chr 9:26,066,675...26,118,408
JBrowse link
G DUT deoxyuridine triphosphatase IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr15:48,329,991...48,343,373
Ensembl chr15:48,331,011...48,343,373
JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic IDA
IBA
(PMID:10681516)
(PMID:21873635)
UniProtKB
GO_Central
PMID:10681516, PMID:21873635 NCBI chr17:75,130,228...75,131,965
Ensembl chr17:75,130,225...75,131,757
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:17,303,373...17,347,663
Ensembl chr17:17,303,335...17,347,663
JBrowse link
pyrimidine nucleobase biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:40,979,696...41,012,565
Ensembl chr 1:40,979,688...41,012,565
JBrowse link
G CTPS2 CTP synthase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:16,587,999...16,712,917
Ensembl chr  X:16,587,999...16,712,936
JBrowse link
G UMPS uridine monophosphate synthetase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:124,730,442...124,749,273
Ensembl chr 3:124,730,433...124,749,273
JBrowse link
pyrimidine nucleobase catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRMP1 collapsin response mediator protein 1 NOT IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:5,820,764...5,893,086
Ensembl chr 4:5,748,084...5,893,086
JBrowse link
G DPYD dihydropyrimidine dehydrogenase IMP
ISS
(PMID:11988088) UniProtKB PMID:11988088 GO_REF:0000024 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000
JBrowse link
G DPYS dihydropyrimidinase IDA
IBA
(PMID:9718352)
(PMID:21873635)
UniProtKB
GO_Central
PMID:9718352, PMID:21873635 NCBI chr 8:104,379,429...104,467,074
Ensembl chr 8:104,330,324...104,467,055
JBrowse link
G DPYSL2 dihydropyrimidinase like 2 NOT IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:26,514,031...26,658,175
Ensembl chr 8:26,514,031...26,658,178
JBrowse link
G DPYSL3 dihydropyrimidinase like 3 NOT IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:147,390,808...147,510,068
Ensembl chr 5:147,390,808...147,510,068
JBrowse link
G DPYSL4 dihydropyrimidinase like 4 NOT IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:132,184,983...132,205,759
Ensembl chr10:132,186,948...132,205,759
JBrowse link
G DPYSL5 dihydropyrimidinase like 5 NOT IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:26,847,995...26,950,351
Ensembl chr 2:26,847,747...26,950,351
JBrowse link
pyrimidine nucleobase metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RRM1 ribonucleotide reductase catalytic subunit M1 IEA Ensembl GO_REF:0000107 NCBI chr11:4,094,685...4,138,932
Ensembl chr11:4,094,707...4,138,932
JBrowse link
G RRM2 ribonucleotide reductase regulatory subunit M2 ISO orotic acid RGD PMID:10204803 RGD:5133695 NCBI chr 2:10,122,568...10,211,010
Ensembl chr 2:10,120,698...10,211,725
JBrowse link
G TYMP thymidine phosphorylase IEA InterPro GO_REF:0000002 NCBI chr22:50,525,752...50,530,085
Ensembl chr22:50,525,752...50,530,032
JBrowse link
G TYMS thymidylate synthetase ISO 5-fluorocytosine RGD PMID:9524100 RGD:5133447 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578
JBrowse link
pyrimidine nucleoside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase TAS Reactome Reactome:R-HSA-500753 NCBI chr 2:27,217,369...27,243,943
Ensembl chr 2:27,217,369...27,243,943
JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) TAS Reactome Reactome:R-HSA-500753 NCBI chr16:72,008,744...72,027,659
Ensembl chr16:72,008,588...72,027,664
JBrowse link
G UMPS uridine monophosphate synthetase TAS Reactome Reactome:R-HSA-500753 NCBI chr 3:124,730,442...124,749,273
Ensembl chr 3:124,730,433...124,749,273
JBrowse link
pyrimidine nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase TAS Reactome Reactome:R-HSA-73621 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000
JBrowse link
G DPYS dihydropyrimidinase TAS Reactome Reactome:R-HSA-73621 NCBI chr 8:104,379,429...104,467,074
Ensembl chr 8:104,330,324...104,467,055
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic TAS Reactome Reactome:R-HSA-73621 NCBI chr17:75,130,228...75,131,965
Ensembl chr17:75,130,225...75,131,757
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA TAS Reactome Reactome:R-HSA-73621 NCBI chr 1:39,659,121...39,672,038
Ensembl chr 1:39,659,121...39,672,038
JBrowse link
G NT5C3A 5'-nucleotidase, cytosolic IIIA TAS Reactome Reactome:R-HSA-73621 NCBI chr 7:33,014,113...33,062,776
Ensembl chr 7:33,014,114...33,062,797
JBrowse link
G NT5E 5'-nucleotidase ecto TAS Reactome Reactome:R-HSA-73621 NCBI chr 6:85,450,083...85,495,784
Ensembl chr 6:85,449,584...85,495,791
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial TAS Reactome Reactome:R-HSA-73621 NCBI chr17:17,303,373...17,347,663
Ensembl chr17:17,303,335...17,347,663
JBrowse link
G TYMP thymidine phosphorylase TAS Reactome Reactome:R-HSA-73621 NCBI chr22:50,525,752...50,530,085
Ensembl chr22:50,525,752...50,530,032
JBrowse link
G UPB1 beta-ureidopropionase 1 TAS
IMP
(PMID:22525402) Reactome
UniProt
PMID:22525402 Reactome:R-HSA-73621 NCBI chr22:24,495,060...24,528,681
Ensembl chr22:24,494,107...24,528,390
JBrowse link
G UPP1 uridine phosphorylase 1 TAS Reactome Reactome:R-HSA-73621 NCBI chr 7:48,088,308...48,108,736
Ensembl chr 7:48,088,628...48,108,736
JBrowse link
G UPP2 uridine phosphorylase 2 TAS Reactome Reactome:R-HSA-73621 NCBI chr 2:157,995,179...158,136,154
Ensembl chr 2:157,876,702...158,136,154
JBrowse link
pyrimidine nucleoside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERH ERH mRNA splicing and mitosis factor TAS (PMID:8786099) PINC PMID:8786099 NCBI chr14:69,380,128...69,398,299
Ensembl chr14:69,380,128...69,398,299
JBrowse link
G NT5C3A 5'-nucleotidase, cytosolic IIIA NAS (PMID:10942414) UniProtKB PMID:10942414 NCBI chr 7:33,014,113...33,062,776
Ensembl chr 7:33,014,114...33,062,797
JBrowse link
G TYMP thymidine phosphorylase IDA
IEA
IMP
(PMID:1590793)
(PMID:9924029)
CAFA
InterPro
PMID:1590793, PMID:9924029 GO_REF:0000002 NCBI chr22:50,525,752...50,530,085
Ensembl chr22:50,525,752...50,530,032
JBrowse link
pyrimidine nucleoside salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDA cytidine deaminase TAS Reactome Reactome:R-HSA-73614 NCBI chr 1:20,589,097...20,618,903
Ensembl chr 1:20,589,086...20,618,903
JBrowse link
G DCK deoxycytidine kinase TAS Reactome Reactome:R-HSA-73614 NCBI chr 4:70,993,649...71,030,914
Ensembl chr 4:70,992,538...71,030,914
JBrowse link
G PUDP pseudouridine 5'-phosphatase TAS Reactome Reactome:R-HSA-73614 NCBI chr  X:6,768,840...7,148,153
Ensembl chr  X:6,667,865...7,148,190
Ensembl chr  X:6,667,865...7,148,190
JBrowse link
G TK1 thymidine kinase 1 TAS Reactome Reactome:R-HSA-73614 NCBI chr17:78,174,079...78,187,204
Ensembl chr17:78,174,091...78,187,233
JBrowse link
G TK2 thymidine kinase 2 TAS Reactome Reactome:R-HSA-73614 NCBI chr16:66,508,003...66,550,291
Ensembl chr16:66,508,003...66,552,544
JBrowse link
G TYMP thymidine phosphorylase TAS Reactome Reactome:R-HSA-73614 NCBI chr22:50,525,752...50,530,085
Ensembl chr22:50,525,752...50,530,032
JBrowse link
G UCK1 uridine-cytidine kinase 1 TAS Reactome Reactome:R-HSA-73614 NCBI chr 9:131,523,801...131,531,263
Ensembl chr 9:131,523,801...131,531,264
JBrowse link
G UCK2 uridine-cytidine kinase 2 TAS Reactome Reactome:R-HSA-73614 NCBI chr 1:165,827,614...165,911,618
Ensembl chr 1:165,827,614...165,911,618
JBrowse link
G UCKL1 uridine-cytidine kinase 1 like 1 TAS Reactome Reactome:R-HSA-73614 NCBI chr20:63,939,829...63,956,447
Ensembl chr20:63,939,829...63,956,416
JBrowse link
G UPP1 uridine phosphorylase 1 TAS Reactome Reactome:R-HSA-73614 NCBI chr 7:48,088,308...48,108,736
Ensembl chr 7:48,088,628...48,108,736
JBrowse link
G UPP2 uridine phosphorylase 2 TAS Reactome Reactome:R-HSA-73614 NCBI chr 2:157,995,179...158,136,154
Ensembl chr 2:157,876,702...158,136,154
JBrowse link
pyrimidine nucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 IEA InterPro GO_REF:0000002 NCBI chr 1:40,979,696...41,012,565
Ensembl chr 1:40,979,688...41,012,565
JBrowse link
G PRPS1 phosphoribosyl pyrophosphate synthetase 1 NAS (PMID:17701896) UniProtKB PMID:17701896 NCBI chr  X:107,628,510...107,651,026
Ensembl chr  X:107,628,428...107,651,993
Ensembl chr  X:107,628,428...107,651,993
JBrowse link
G ZBTB49 zinc finger and BTB domain containing 49 IEA UniProt GO_REF:0000043 NCBI chr 4:4,290,197...4,321,786
Ensembl chr 4:4,290,251...4,321,786
JBrowse link
pyrimidine nucleotide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS2 CTP synthase 2 TAS (PMID:10899599) PINC PMID:10899599 NCBI chr  X:16,587,999...16,712,917
Ensembl chr  X:16,587,999...16,712,936
JBrowse link
G DCK deoxycytidine kinase IDA (PMID:12808445) UniProtKB PMID:12808445 NCBI chr 4:70,993,649...71,030,914
Ensembl chr 4:70,992,538...71,030,914
JBrowse link
G DCTD dCMP deaminase IEA
TAS
(PMID:7685356) InterPro
PINC
PMID:7685356 GO_REF:0000002 NCBI chr 4:182,890,091...182,917,611
Ensembl chr 4:182,890,060...182,917,936
JBrowse link
G ENPP3 ectonucleotide pyrophosphatase/phosphodiesterase 3 IMP (PMID:11342463) UniProtKB PMID:11342463 NCBI chr 6:131,637,302...131,747,413
Ensembl chr 6:131,628,442...131,747,418
JBrowse link
G UPP1 uridine phosphorylase 1 ISO (MGI:3584214|PMID:15772079) MGI PMID:15772079 MGI:3584214 NCBI chr 7:48,088,308...48,108,736
Ensembl chr 7:48,088,628...48,108,736
JBrowse link
pyrimidine ribonucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK5 adenylate kinase 5 TAS (PMID:10215863) PINC PMID:10215863 NCBI chr 1:77,281,908...77,559,966
Ensembl chr 1:77,282,019...77,559,966
JBrowse link
G CMPK1 cytidine/uridine monophosphate kinase 1 TAS (PMID:10462544) PINC PMID:10462544 NCBI chr 1:47,333,790...47,378,839
Ensembl chr 1:47,333,797...47,378,839
JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:72,008,744...72,027,659
Ensembl chr16:72,008,588...72,027,664
JBrowse link
thiamine diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TPK1 thiamin pyrophosphokinase 1 IEA
IBA
(PMID:21873635) InterPro
GO_Central
UniProtKB
PMID:21873635 GO_REF:0000002, GO_REF:0000041 NCBI chr 7:144,451,941...144,836,424
Ensembl chr 7:144,451,941...144,836,395
JBrowse link
thiamine diphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THTPA thiamine triphosphatase ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr14:23,511,760...23,560,271
Ensembl chr14:23,555,988...23,560,271
JBrowse link
thiamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACP3 acid phosphatase 3 ISS UniProtKB GO_REF:0000024 NCBI chr 3:132,317,403...132,368,765
Ensembl chr 3:132,317,369...132,368,298
JBrowse link
G THTPA thiamine triphosphatase TAS (PMID:11827967) UniProtKB PMID:11827967 NCBI chr14:23,511,760...23,560,271
Ensembl chr14:23,555,988...23,560,271
JBrowse link
G TKTL1 transketolase like 1 TAS (PMID:8838793) PINC PMID:8838793 NCBI chr  X:154,295,795...154,330,350
Ensembl chr  X:154,295,795...154,330,350
JBrowse link
G TPK1 thiamin pyrophosphokinase 1 IEA InterPro
Ensembl
GO_REF:0000002, GO_REF:0000107 NCBI chr 7:144,451,941...144,836,424
Ensembl chr 7:144,451,941...144,836,395
JBrowse link
thiamine-containing compound metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC19A2 solute carrier family 19 member 2 TAS Reactome Reactome:R-HSA-196819 NCBI chr 1:169,463,909...169,485,970
Ensembl chr 1:169,463,909...169,485,944
JBrowse link
G SLC19A3 solute carrier family 19 member 3 TAS Reactome Reactome:R-HSA-196819 NCBI chr 2:227,683,763...227,718,030
Ensembl chr 2:227,683,763...227,718,028
JBrowse link
G SLC25A19 solute carrier family 25 member 19 TAS Reactome Reactome:R-HSA-196819 NCBI chr17:75,272,980...75,289,958
Ensembl chr17:75,272,981...75,289,510
JBrowse link
G THTPA thiamine triphosphatase TAS Reactome Reactome:R-HSA-196819 NCBI chr14:23,511,760...23,560,271
Ensembl chr14:23,555,988...23,560,271
JBrowse link
G TPK1 thiamin pyrophosphokinase 1 TAS Reactome Reactome:R-HSA-196819 NCBI chr 7:144,451,941...144,836,424
Ensembl chr 7:144,451,941...144,836,395
JBrowse link
thymidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHFR2 dihydrofolate reductase 2 IDA (PMID:21876188) UniProtKB PMID:21876188 NCBI chr 3:94,057,922...94,063,389
Ensembl chr 3:94,047,836...94,063,389
JBrowse link
G DTYMK deoxythymidylate kinase TAS (PMID:8024690) GO_Central PMID:8024690 NCBI chr 2:241,675,747...241,686,815
Ensembl chr 2:241,675,747...241,686,944
JBrowse link
thymidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase IDA (PMID:1512248) UniProtKB PMID:1512248 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000
JBrowse link
thymidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TK1 thymidine kinase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:78,174,079...78,187,204
Ensembl chr17:78,174,091...78,187,233
JBrowse link
G TK2 thymidine kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr16:66,508,003...66,550,291
Ensembl chr16:66,508,003...66,552,544
JBrowse link
thymine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 IMP
IBA
(PMID:23835272)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:21873635, PMID:23835272 NCBI chr14:74,056,847...74,084,453
Ensembl chr14:74,056,847...74,084,492
JBrowse link
G DPYD dihydropyrimidine dehydrogenase IDA
IBA
(PMID:10410956)
(PMID:21873635)
UniProtKB
GO_Central
PMID:10410956, PMID:21873635 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000
JBrowse link
G DPYS dihydropyrimidinase ISS UniProtKB GO_REF:0000024 NCBI chr 8:104,379,429...104,467,074
Ensembl chr 8:104,330,324...104,467,055
JBrowse link
thymine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 ISS UniProtKB GO_REF:0000024 NCBI chr14:74,056,847...74,084,453
Ensembl chr14:74,056,847...74,084,492
JBrowse link
UDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:47,333,790...47,378,839
Ensembl chr 1:47,333,797...47,378,839
JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 IDA (PMID:9556635) UniProtKB PMID:9556635 NCBI chr 8:23,429,162...23,457,647
Ensembl chr 8:23,385,783...23,457,695
JBrowse link
UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 IEA GOC GO_REF:0000108 NCBI chr 1:47,333,790...47,378,839
Ensembl chr 1:47,333,797...47,378,839
JBrowse link
G UCKL1 uridine-cytidine kinase 1 like 1 IEA GOC GO_REF:0000108 NCBI chr20:63,939,829...63,956,447
Ensembl chr20:63,939,829...63,956,416
JBrowse link
G UMPS uridine monophosphate synthetase IDA
IBA
(PMID:11730338), (PMID:6893554)
(PMID:21873635)
UniProtKB
GO_Central
PMID:6893554, PMID:11730338, PMID:21873635 NCBI chr 3:124,730,442...124,749,273
Ensembl chr 3:124,730,433...124,749,273
JBrowse link
G UPRT uracil phosphoribosyltransferase homolog IEA Ensembl GO_REF:0000107 NCBI chr  X:75,156,369...75,304,897
Ensembl chr  X:75,156,388...75,304,885
JBrowse link
UMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UCK1 uridine-cytidine kinase 1 IEA UniProtKB GO_REF:0000041 NCBI chr 9:131,523,801...131,531,263
Ensembl chr 9:131,523,801...131,531,264
JBrowse link
G UCK2 uridine-cytidine kinase 2 IEA UniProtKB GO_REF:0000041 NCBI chr 1:165,827,614...165,911,618
Ensembl chr 1:165,827,614...165,911,618
JBrowse link
G UCKL1 uridine-cytidine kinase 1 like 1 IEA UniProtKB GO_REF:0000041 NCBI chr20:63,939,829...63,956,447
Ensembl chr20:63,939,829...63,956,416
JBrowse link
G UPP1 uridine phosphorylase 1 IEA UniProtKB GO_REF:0000041 NCBI chr 7:48,088,308...48,108,736
Ensembl chr 7:48,088,628...48,108,736
JBrowse link
G UPP2 uridine phosphorylase 2 IEA UniProtKB GO_REF:0000041 NCBI chr 2:157,995,179...158,136,154
Ensembl chr 2:157,876,702...158,136,154
JBrowse link
uracil catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase IDA
IBA
(PMID:1512248), (PMID:18075467)
(PMID:21873635)
UniProtKB
GO_Central
PMID:1512248, PMID:18075467, PMID:21873635 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000
JBrowse link
G DPYS dihydropyrimidinase IMP
IDA
(PMID:18075467)
(PMID:10410956)
UniProtKB PMID:10410956, PMID:18075467 NCBI chr 8:104,379,429...104,467,074
Ensembl chr 8:104,330,324...104,467,055
JBrowse link
uracil metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase ISO RGD PMID:7626590 RGD:1624989 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000
JBrowse link
G DPYS dihydropyrimidinase ISO RGD PMID:7626590, PMID:8307005 RGD:1624989, RGD:1624990 NCBI chr 8:104,379,429...104,467,074
Ensembl chr 8:104,330,324...104,467,055
JBrowse link
G TYMS thymidylate synthetase IEA Ensembl GO_REF:0000107 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578
JBrowse link
uridine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPP1 uridine phosphorylase 1 IDA (PMID:7488099) UniProt PMID:7488099 NCBI chr 7:48,088,308...48,108,736
Ensembl chr 7:48,088,628...48,108,736
JBrowse link
G UPP2 uridine phosphorylase 2 IDA (PMID:12849978), (PMID:21855639) UniProt PMID:12849978, PMID:21855639 NCBI chr 2:157,995,179...158,136,154
Ensembl chr 2:157,876,702...158,136,154
JBrowse link
uridine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPP1 uridine phosphorylase 1 ISO (MGI:3584214|PMID:15772079) MGI PMID:15772079 MGI:3584214 NCBI chr 7:48,088,308...48,108,736
Ensembl chr 7:48,088,628...48,108,736
JBrowse link
G UPP2 uridine phosphorylase 2 NAS (PMID:11278417) UniProtKB PMID:11278417 NCBI chr 2:157,995,179...158,136,154
Ensembl chr 2:157,876,702...158,136,154
JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:27,217,369...27,243,943
Ensembl chr 2:27,217,369...27,243,943
JBrowse link
G NME1 NME/NM23 nucleoside diphosphate kinase 1 IEA InterPro GO_REF:0000002 NCBI chr17:51,153,559...51,162,168
Ensembl chr17:51,153,559...51,162,428
Ensembl chr17:51,153,559...51,162,428
JBrowse link
G NME1-NME2 NME1-NME2 readthrough IEA InterPro
Ensembl
GO_REF:0000002, GO_REF:0000107 NCBI chr17:51,153,559...51,171,744
Ensembl chr17:51,153,590...51,171,744
JBrowse link
G NME2 NME/NM23 nucleoside diphosphate kinase 2 IEA InterPro
Ensembl
GO_REF:0000002, GO_REF:0000107 NCBI chr17:51,165,536...51,171,744
Ensembl chr17:51,165,435...51,171,744
Ensembl chr17:51,165,435...51,171,744
JBrowse link
G NME2P1 NME2 pseudogene 1 IEA InterPro GO_REF:0000002 NCBI chr12:120,282,218...120,282,856
Ensembl chr12:120,282,303...120,282,716
JBrowse link
G NME3 NME/NM23 nucleoside diphosphate kinase 3 IEA InterPro GO_REF:0000002 NCBI chr16:1,770,320...1,771,750
Ensembl chr16:1,770,286...1,771,730
JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 IEA InterPro GO_REF:0000002 NCBI chr16:396,729...400,754
Ensembl chr16:396,725...410,367
JBrowse link
G NME5 NME/NM23 family member 5 IEA InterPro GO_REF:0000002 NCBI chr 5:138,115,175...138,139,471
Ensembl chr 5:138,115,175...138,139,443
JBrowse link
G NME6 NME/NM23 nucleoside diphosphate kinase 6 IEA InterPro GO_REF:0000002 NCBI chr 3:48,288,402...48,302,904
Ensembl chr 3:48,290,722...48,301,685
JBrowse link
G NME7 NME/NM23 family member 7 IEA InterPro
UniProt
GO_REF:0000002, GO_REF:0000104 NCBI chr 1:169,132,531...169,367,797
Ensembl chr 1:169,132,531...169,367,948
JBrowse link
G NME9 NME/NM23 family member 9 IEA InterPro GO_REF:0000002 NCBI chr 3:138,261,436...138,331,785
Ensembl chr 3:138,261,437...138,329,886
JBrowse link
UTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK3 adenylate kinase 3 IDA (PMID:11485571) BHF-UCL PMID:11485571 NCBI chr 9:4,709,556...4,742,043
Ensembl chr 9:4,709,556...4,742,043
JBrowse link

Term paths to the root
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  biological_process 18672
    metabolic process 12302
      nitrogen compound metabolic process 10481
        cellular nitrogen compound metabolic process 6772
          pyrimidine-containing compound metabolic process 94
            5-methylcytosine metabolic process + 3
            orotic acid metabolic process 0
            pyrimidine nucleobase metabolic process + 23
            pyrimidine nucleoside metabolic process + 37
            pyrimidine nucleotide metabolic process + 48
            pyrimidine-containing compound biosynthetic process + 43
            pyrimidine-containing compound catabolic process + 45
            thiamine diphosphate metabolic process + 2
            thiamine-containing compound metabolic process + 7
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.