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ONTOLOGY REPORT - ANNOTATIONS


Term:seminiferous tubule development
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Accession:GO:0072520 term browser browse the term
Definition:The reproductive developmental process whose specific outcome is the progression of the seminiferous tubule over time, from its formation to the mature structure. Seminiferous tubules are ducts located in the testicles, and are the specific location of meiosis, and the subsequent creation of gametes, namely spermatozoa.


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seminiferous tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4847971|PMID:20981830)
Ensembl
RGD
PMID:20981830 GO_REF:0000107 MGI:4847971 NCBI chr19:10,423,534...10,460,674
Ensembl chr19:10,423,501...10,460,674
JBrowse link
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) RGD PMID:21048919 MGI:4849324 NCBI chr 3:175,548,181...175,552,943
Ensembl chr 3:175,548,174...175,552,947
JBrowse link
G Ar androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1922269 (MGI:4430676|PMID:19574395), (MGI:5050497|PMID:21084446)
Ensembl
RGD
PMID:19574395 PMID:21084446 GO_REF:0000107 MGI:4430676 MGI:5050497 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Atrx ATRX, chromatin remodeler involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3528480 (MGI:4950648|PMID:21427128)
Ensembl
RGD
PMID:21427128 GO_REF:0000107 MGI:4950648 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
G Brip1 BRCA1 interacting helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (MGI:5700253|PMID:26490168) RGD PMID:26490168 MGI:5700253 NCBI chr10:73,507,009...73,632,742
Ensembl chr10:73,507,100...73,629,581
JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:3042214|MGI:3778685 (MGI:4939548|PMID:21172404) RGD PMID:21172404 MGI:4939548 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
G Ing2 inhibitor of growth family, member 2 involved_in ISO (MGI:4867787|PMID:21124965) RGD PMID:21124965 MGI:4867787 NCBI chr16:47,714,756...47,725,836
Ensembl chr16:47,717,951...47,725,836
JBrowse link
G Inhbb inhibin subunit beta B IEP RGD PMID:2477225 RGD:9743933 NCBI chr13:35,436,532...35,442,222
Ensembl chr13:35,436,532...35,442,222
JBrowse link
G Jmjd1c jumonji domain containing 1C acts_upstream_of_or_within ISO MGI:5544070 (MGI:5529185|PMID:24006281) RGD PMID:24006281 MGI:5529185 NCBI chr20:22,751,743...22,914,080
Ensembl chr20:22,751,743...22,882,672
JBrowse link
G Kif18a kinesin family member 18A acts_upstream_of_or_within ISO MGI:5575486 (MGI:5574079|PMID:20981276) RGD PMID:20981276 MGI:5574079 NCBI chr 3:100,366,168...100,426,867
Ensembl chr 3:100,366,168...100,427,030
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2181999 (MGI:1929316|PMID:11145748)
Ensembl
RGD
PMID:11145748 GO_REF:0000107 MGI:1929316 NCBI chr 6:12,493,182...12,554,482
Ensembl chr 6:12,493,943...12,554,439
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within ISO MGI:1929645 (MGI:5428050|PMID:22711701) RGD PMID:22711701 MGI:5428050 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rec8 REC8 meiotic recombination protein acts_upstream_of_or_within ISO MGI:3652039 (MGI:5428050|PMID:22711701) RGD PMID:22711701 MGI:5428050 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Rnase10 ribonuclease A family member 10 acts_upstream_of_or_within ISO MGI:88064 (MGI:5050497|PMID:21084446) RGD PMID:21084446 MGI:5050497 NCBI chr15:27,930,581...27,933,873
Ensembl chr15:27,933,211...27,933,849
JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2386394 (MGI:5604269|PMID:24739304)
Ensembl
RGD
PMID:24739304 GO_REF:0000107 MGI:5604269 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Spata2 spermatogenesis associated 2 acts_upstream_of_or_within ISO MGI:6093706 (MGI:5919108|PMID:29025062) RGD PMID:29025062 MGI:5919108 NCBI chr 3:164,229,211...164,239,483
Ensembl chr 3:164,230,852...164,239,250
JBrowse link
G Spink2 serine peptidase inhibitor, Kazal type 2 acts_upstream_of_or_within ISO MGI:4966113 (MGI:5287926|PMID:21705336) RGD PMID:21705336 MGI:5287926 NCBI chr14:33,247,278...33,253,913
Ensembl chr14:33,247,274...33,253,913
Ensembl chr14:33,247,274...33,253,913
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 acts_upstream_of_or_within ISO MGI:1856684 (MGI:5551670|PMID:24239381) RGD PMID:24239381 MGI:5551670 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158
JBrowse link
G Ubb ubiquitin B acts_upstream_of_or_within ISO MGI:3774112 (MGI:3771519|PMID:18070917) RGD PMID:18070917 MGI:3771519 NCBI chr10:48,880,231...48,881,896
Ensembl chr10:48,881,049...48,881,881
JBrowse link
G Wdr48 WD repeat domain 48 acts_upstream_of_or_within ISO MGI:3877670 (MGI:5547894|PMID:24001775) RGD PMID:24001775 MGI:5547894 NCBI chr 8:128,577,080...128,610,287
Ensembl chr 8:128,577,080...128,610,287
JBrowse link
G Wt1 WT1 transcription factor acts_upstream_of_or_within ISO (MGI:3612377|PMID:16418481) RGD PMID:16418481 MGI:3612377 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    multicellular organismal process 8821
      multicellular organism development 5629
        tube development 1221
          seminiferous tubule development 21
Path 2
Term Annotations click to browse term
  biological_process 19491
    developmental process 6766
      anatomical structure development 6192
        multicellular organism development 5629
          system development 5301
            reproductive system development 590
              reproductive structure development 585
                gonad development 327
                  male gonad development 202
                    seminiferous tubule development 21
paths to the root