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ONTOLOGY REPORT - ANNOTATIONS

Term:tricarboxylic acid metabolic process
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Accession:GO:0072350 term browser browse the term
Definition:The chemical reactions and pathways involving dicarboxylic acids, any organic acid containing three carboxyl (COOH) groups or anions (COO-).
Synonyms:exact_synonym: tricarboxylic acid metabolism


show annotations for term's descendants           Sort by:
tricarboxylic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACACB acetyl-CoA carboxylase beta involved_in ISO
IEA		 RGD
Ensembl		 PMID:31709908 GO_REF:0000107 RGD:329901803 NCBI chr12:109,111,189...109,268,226
Ensembl chr12:109,116,587...109,268,226 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr10:87,050,202...87,094,843
Ensembl chr10:87,050,202...87,094,843 		JBrowse link
G PCK1 phosphoenolpyruvate carboxykinase 1 involved_in IDA (PMID:30193097) UniProt PMID:30193097 NCBI chr20:57,561,110...57,568,121
Ensembl chr20:57,561,080...57,568,121 		JBrowse link
G SIRT4 sirtuin 4 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:120,291,780...120,313,249
Ensembl chr12:120,302,316...120,313,249 		JBrowse link
G SLC34A1 solute carrier family 34 member 1 involved_in ISO
IEA		 tris(2-carboxyethyl)phosphine (TCEP) RGD
Ensembl		 PMID:10926678 GO_REF:0000107 RGD:7243173 NCBI chr 5:177,384,434...177,398,848
Ensembl chr 5:177,379,235...177,398,848 		JBrowse link
argininosuccinate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase ISO RGD PMID:4062872 PMID:8586639 RGD:1599287 RGD:2300098 NCBI chr 7:66,075,819...66,093,576
Ensembl chr 7:66,075,800...66,094,697 		JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in ISO
IBA
IEA
IMP		 (PMID:7977368) RGD
GO_Central
TreeGrafter
BHF-UCL
Ensembl		 PMID:4062872 PMID:7977368 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2300098 NCBI chr 9:130,444,707...130,501,274
Ensembl chr 9:130,444,961...130,501,274 		JBrowse link
citrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACLY ATP citrate lyase involved_in ISO
IEA
IDA		 (PMID:1371749) RGD
InterPro
BHF-UCL		 PMID:1371749 PMID:18062843 GO_REF:0000002 RGD:2317315 NCBI chr17:41,866,917...41,930,545
Ensembl chr17:41,866,917...41,930,542 		JBrowse link
G ACO1 aconitase 1 involved_in IDA
IBA
IEA
IMP		 (PMID:16527810), (PMID:8041788)
(PMID:1281544)		 HGNC-UCL
GO_Central
TreeGrafter
CAFA		 PMID:1281544 PMID:8041788 PMID:16527810 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:32,384,643...32,454,769
Ensembl chr 9:32,384,603...32,454,769 		JBrowse link
G ACO2 aconitase 2 involved_in
acts_upstream_of_or_within		 ISO
TAS
IEA
IDA		 (PMID:9630632) RGD
PINC
Ensembl
MGI		 PMID:9630632 PMID:9712727 PMID:14674759 GO_REF:0000107 RGD:2306852 RGD:2306877 NCBI chr22:41,469,117...41,528,974
Ensembl chr22:41,447,830...41,529,273 		JBrowse link
G CS citrate synthase involved_in IEA
ISO		 InterPro
RGD		 PMID:818082 PMID:5820645 PMID:9712727 GO_REF:0000002 RGD:2306824 RGD:2306825 RGD:2306877 NCBI chr12:56,271,699...56,300,330
Ensembl chr12:56,271,699...56,300,391 		JBrowse link
G IREB2 iron responsive element binding protein 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:78,437,431...78,501,453
Ensembl chr15:78,437,431...78,501,453 		JBrowse link
isocitrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACO2 aconitase 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:9712727 PMID:14674759 GO_REF:0000107 RGD:2306852 RGD:2306877 NCBI chr22:41,469,117...41,528,974
Ensembl chr22:41,447,830...41,529,273 		JBrowse link
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 involved_in ISO
IBA
IEA
IDA		 (PMID:10521434), (PMID:19935646), (PMID:20171178) RGD
GO_Central
TreeGrafter
Ensembl
UniProt
InterPro		 PMID:10521434 PMID:17447164 PMID:19935646 PMID:20171178 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1624966 NCBI chr 2:208,236,227...208,255,071
Ensembl chr 2:208,236,229...208,266,074 		JBrowse link
G IDH2 isocitrate dehydrogenase (NADP(+)) 2 involved_in IEA
ISS		 InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000118 NCBI chr15:90,083,045...90,102,468
Ensembl chr15:90,083,045...90,102,477 		JBrowse link
G IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:78,149,362...78,171,945
Ensembl chr15:78,131,498...78,171,945 		JBrowse link
G IDH3B isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta involved_in TAS
IEA
IBA		 (PMID:10601238) PINC
TreeGrafter
GO_Central		 PMID:10601238 GO_REF:0000033 GO_REF:0000118 NCBI chr20:2,658,395...2,664,216
Ensembl chr20:2,658,395...2,664,219 		JBrowse link
G IDH3G isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma involved_in ISS
IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:153,785,768...153,794,375
Ensembl chr  X:153,785,766...153,794,512 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19770
    metabolic process 12509
      cellular metabolic process 11168
        organic acid metabolic process 1059
          oxoacid metabolic process 1049
            carboxylic acid metabolic process 1022
              tricarboxylic acid metabolic process 17
                5,6,7,8-tetrahydrosarcinapterin metabolic process + 0
                aerobactin metabolic process + 0
                argininosuccinate metabolic process 2
                citrate metabolic process + 5
                coenzyme gamma-F420-2 metabolic process + 0
                isocitrate metabolic process 6
                nicotianamine metabolic process + 0
                nitrilotriacetate metabolic process + 0
                sarcinapterin metabolic process + 0
                tricarboxylic acid biosynthetic process + 0
                tricarboxylic acid catabolic process + 0
paths to the root