Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:monocarboxylic acid biosynthetic process
go back to main search page
Accession:GO:0072330 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.
Synonyms:exact_synonym: monocarboxylic acid anabolism;   monocarboxylic acid biosynthesis;   monocarboxylic acid formation;   monocarboxylic acid synthesis


show annotations for term's descendants           Sort by:
 
2-oxobutyrate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase-like 2 ISO
IBA
(MGI:3690523|PMID:17034760)
PMID:21873635
RGD PMID:17034760, PMID:21873635 MGI:3690523, RGD:13792537 NCBI chr 4:98,976,559...98,997,187
Ensembl chr 4:98,976,550...98,995,590
JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 IEA
ISO
GO_REF:0000107
(MGI:2662611|PMID:11876656)
Ensembl
RGD
PMID:11876656 GO_REF:0000107, MGI:2662611 NCBI chr 1:238,222,689...238,264,381
Ensembl chr 1:238,222,521...238,264,330
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family, member A1 ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 1:16,910,043...16,929,465
Ensembl chr 1:16,910,069...16,930,481
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IDA 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
JBrowse link
G Dhrs9 dehydrogenase/reductase 9 ISO
ISS
(PMID:11304534)
GO_REF:0000024
RGD
UniProt
PMID:11304534 GO_REF:0000024 NCBI chr 3:55,623,671...55,645,883
Ensembl chr 3:55,623,634...55,648,325
JBrowse link
G Rdh16 retinol dehydrogenase 16 ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 7:71,058,150...71,072,685
Ensembl chr 7:70,980,422...71,072,689
JBrowse link
acetate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short-chain family member 1 IDA RGD PMID:4334748 RGD:2317572 NCBI chr 3:146,420,346...146,470,293
Ensembl chr 3:146,420,346...146,470,293
JBrowse link
G Acss2 acyl-CoA synthetase short-chain family member 2 IDA RGD PMID:4334748 RGD:2317572 NCBI chr 3:151,032,925...151,075,856
Ensembl chr 3:151,032,952...151,075,856
JBrowse link
bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1, member D1 ISO
IEA
(PMID:7508385)
GO_REF:0000107
RGD
Ensembl
PMID:7508385 GO_REF:0000107 NCBI chr 4:65,110,706...65,143,930
Ensembl chr 4:65,110,746...65,143,941
JBrowse link
G Amacr alpha-methylacyl-CoA racemase IDA
IEA
GO_REF:0000041 UniProt PMID:11964182 GO_REF:0000041, RGD:704372 NCBI chr 2:60,949,276...60,961,342
Ensembl chr 2:60,949,256...60,961,326
JBrowse link
G Baat bile acid CoA:amino acid N-acyltransferase ISO (PMID:12810727), (PMID:8034703) RGD PMID:8034703, PMID:12810727 NCBI chr 5:64,768,397...64,777,368
Ensembl chr 5:64,768,401...64,777,368
JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000041
(PMID:11412116), (PMID:9660774)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:9660774, PMID:11412116 GO_REF:0000024, GO_REF:0000041, GO_REF:0000107 NCBI chr 9:81,968,285...81,998,213
Ensembl chr 9:81,968,332...81,998,169
JBrowse link
G Cyp39a1 cytochrome P450, family 39, subfamily a, polypeptide 1 ISO
IBA
(PMID:10748047)
PMID:21873635
(MGI:1859119|PMID:10748047)
RGD PMID:10748047, PMID:21873635 MGI:1859119, RGD:13792537 NCBI chr 9:19,804,079...19,880,346
Ensembl chr 9:19,804,079...19,880,346
JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 TAS
IBA
ISO
IDA
IEA
PMID:21873635
(PMID:19965590)
PMID:1694852
GO_REF:0000041
RGD
UniProt
PMID:19965590, PMID:2335522, PMID:21873635, PMID:1694852 GO_REF:0000041, RGD:70535, RGD:13792537, RGD:70534 NCBI chr 5:19,358,734...19,368,431
Ensembl chr 5:19,358,734...19,368,431
JBrowse link
G Cyp7b1 cytochrome P450 family 7 subfamily B member 1 TAS
IBA
ISO
IEA
PMID:21873635
(MGI:1859119|PMID:10748047)
GO_REF:0000107
GO_REF:0000041
RGD
Ensembl
UniProt
PMID:10748047, PMID:12029625, PMID:21873635 GO_REF:0000041, GO_REF:0000107, MGI:1859119, RGD:1298868, RGD:13792537 NCBI chr 2:102,701,903...102,871,257
Ensembl chr 2:102,701,903...102,871,257
JBrowse link
G Cyp8b1 cytochrome P450 family 8 subfamily B member 1 ISO (PMID:14643796)
(MGI:3588413|PMID:12393855)
RGD PMID:12393855, PMID:14643796 MGI:3588413 NCBI chr 8:130,548,418...130,550,388
Ensembl chr 8:130,548,418...130,550,388
JBrowse link
G Hnf1a HNF1 homeobox A ISO MGI:2384427 (MGI:1933035|PMID:11279518) RGD PMID:11279518 MGI:1933035 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 ISO
ISS
(PMID:12917011)
GO_REF:0000024
RGD
UniProt
PMID:12917011 GO_REF:0000024 NCBI chr  X:21,696,796...21,699,241
Ensembl chr  X:21,696,772...21,699,241
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 ISO MGI:2180128 (MGI:3027293|PMID:14673138) RGD PMID:14673138 MGI:3027293 NCBI chr 2:98,251,756...98,269,185
Ensembl chr 2:98,252,925...98,269,184
JBrowse link
G Slc27a2 solute carrier family 27 member 2 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:11980911)
Ensembl
RGD
PMID:11980911, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:119,014,620...119,052,531
Ensembl chr 3:119,014,620...119,052,531
JBrowse link
G Slc27a5 solute carrier family 27 member 5 ISO
IBA
(PMID:11980911)
PMID:21873635
RGD PMID:11980911, PMID:21873635 RGD:13792537 NCBI chr 1:65,576,599...65,587,192
Ensembl chr 1:65,576,535...65,587,186
JBrowse link
G Star steroidogenic acute regulatory protein IDA RGD PMID:15382124 RGD:1600081 NCBI chr16:71,036,204...71,040,847
Ensembl chr16:71,036,204...71,040,847
JBrowse link
creatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gamt guanidinoacetate N-methyltransferase IDA
IBA
ISO
IEA
TAS
PMID:21873635
MGI:3044282 (MGI:3043413|PMID:15028668)
(PMID:8651275)
GO_REF:0000041
RGD
UniProt
PMID:8651275, PMID:15028668, PMID:15533043, PMID:21873635, PMID:12079381 GO_REF:0000041, MGI:3043413, RGD:1359081, RGD:13792537, RGD:632754 NCBI chr 7:12,314,848...12,317,998
Ensembl chr 7:12,314,848...12,317,998
JBrowse link
G Gatm glycine amidinotransferase TAS
IBA
IEA
ISO
PMID:21873635
GO_REF:0000041
(PMID:9218780)
UniProt
RGD
PMID:9218780, PMID:8021264, PMID:21873635 GO_REF:0000041, RGD:70746, RGD:13792537 NCBI chr 3:114,711,570...114,728,155
Ensembl chr 3:114,711,562...114,728,410
JBrowse link
cyclooxygenase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:129,437,423...129,441,553
Ensembl chr 6:129,438,158...129,440,574
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 ISO
IEA
(PMID:1380156)
GO_REF:0000107
RGD
Ensembl
PMID:1380156 GO_REF:0000107 NCBI chr 3:15,560,685...15,582,339
Ensembl chr 3:15,560,712...15,582,344
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISS
ISO
GO_REF:0000024
(MGI:52337|PMID:1419907), (MGI:5315361|PMID:12925531)
(PMID:1380156), (PMID:7592599), (PMID:7947975)
UniProt
RGD
PMID:1380156, PMID:1419907, PMID:7592599, PMID:7947975, PMID:12925531 GO_REF:0000024, MGI:52337, MGI:5315361 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Sphk1 sphingosine kinase 1 IDA RGD PMID:18723875 RGD:2311353 NCBI chr10:105,498,728...105,504,401
Ensembl chr10:105,498,728...105,504,393
JBrowse link
fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034648.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:82,680,253...82,730,832 JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 ISO
ISS
(PMID:25168382)
GO_REF:0000024
RGD
UniProt
PMID:25168382 GO_REF:0000024 NCBI chr 2:225,335,708...225,389,120
Ensembl chr 2:225,335,718...225,389,120
JBrowse link
G Acaca acetyl-CoA carboxylase alpha IDA
ISO
IEA
(MGI:4840155|PMID:20952656)
GO_REF:0000043
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:20952656, PMID:11735100 GO_REF:0000043, GO_REF:0000107, MGI:4840155, RGD:2317316 NCBI chr10:71,519,392...71,719,910
Ensembl chr10:71,536,533...71,719,910
JBrowse link
G Acacb acetyl-CoA carboxylase beta ISO (MGI:3700580|PMID:17210641) RGD PMID:17210641 MGI:3700580 NCBI chr12:48,127,149...48,238,969
Ensembl chr12:48,127,149...48,238,887
JBrowse link
G Acly ATP citrate lyase IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11735100, PMID:21873635 RGD:2317316, RGD:13792537 NCBI chr10:88,392,248...88,442,845
Ensembl chr10:88,392,248...88,442,845
JBrowse link
G Acsf3 acyl-CoA synthetase family member 3 ISO
IBA
(PMID:21846720)
PMID:21873635
RGD PMID:21846720, PMID:21873635 RGD:13792537 NCBI chr19:55,594,801...55,635,312
Ensembl chr19:55,594,831...55,635,122
JBrowse link
G Acsl3 acyl-CoA synthetase long-chain family member 3 IDA RGD PMID:8663269 RGD:70280 NCBI chr 9:84,569,601...84,593,565
Ensembl chr 9:84,569,597...84,593,565
JBrowse link
G Acsm1 acyl-CoA synthetase medium-chain family member 1 ISO (MGI:2150539|PMID:11470804) RGD PMID:11470804 MGI:2150539 NCBI chr 1:189,359,374...189,395,277
Ensembl chr 1:189,289,957...189,395,276
JBrowse link
G Acsm2 acyl-CoA synthetase medium-chain family member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:189,289,957...189,329,007
Ensembl chr 1:189,289,957...189,395,276
JBrowse link
G Acsm3 acyl-CoA synthetase medium-chain family member 3 ISO
IBA
(MGI:2150539|PMID:11470804)
PMID:21873635
RGD PMID:11470804, PMID:21873635 MGI:2150539, RGD:13792537 NCBI chr 1:189,514,504...189,541,233
Ensembl chr 1:189,514,553...189,541,224
JBrowse link
G Acsm4 acyl-CoA synthetase medium-chain family member 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:189,432,604...189,458,799
Ensembl chr 1:189,432,604...189,457,048
JBrowse link
G Acsm5 acyl-CoA synthetase medium-chain family member 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:189,240,955...189,270,422
Ensembl chr 1:189,233,141...189,272,172
JBrowse link
G Brca1 BRCA1, DNA repair associated IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Cbr4 carbonyl reductase 4 IEA
IBA
ISS
ISO
GO_REF:0000041
PMID:21873635
GO_REF:0000024
UniProtKB:Q92506 (PMID:25203508)
UniProt
RGD
PMID:25203508, PMID:21873635 GO_REF:0000024, GO_REF:0000041, RGD:13792537 NCBI chr16:31,944,328...31,972,553
Ensembl chr16:31,956,753...31,972,507
JBrowse link
G Degs1 delta(4)-desaturase, sphingolipid 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:100,665,265...100,672,731
Ensembl chr13:100,666,075...100,672,731
JBrowse link
G Fa2h fatty acid 2-hydroxylase IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:43,545,380...43,596,788
Ensembl chr19:43,545,378...43,596,801
JBrowse link
G Fasn fatty acid synthase IDA
ISO
IEA
(MGI:5426758|PMID:22331133)
GO_REF:0000041
RGD
UniProt
PMID:22331133, PMID:15715522 GO_REF:0000041, MGI:5426758, RGD:2317317 NCBI chr10:109,987,735...110,005,901
Ensembl chr10:109,987,735...110,005,901
JBrowse link
G Hnf1a HNF1 homeobox A ISO MGI:2384429 (MGI:1889102|PMID:10852923) RGD PMID:10852923 MGI:1889102 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:82,924,699...83,048,465
Ensembl chr 3:82,924,687...83,048,435
JBrowse link
G Hsd17b8 hydroxysteroid (17-beta) dehydrogenase 8 IEA
IBA
ISS
ISO
GO_REF:0000041
PMID:21873635
GO_REF:0000024
UniProtKB:Q8N4T8 (PMID:25203508)
UniProt
RGD
PMID:25203508, PMID:21873635 GO_REF:0000024, GO_REF:0000041, RGD:13792537 NCBI chr20:3,817,212...3,819,316
Ensembl chr20:3,817,179...3,819,235
JBrowse link
G Lipc lipase C, hepatic type ISO
IBA
IEA
(PMID:182536)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:182536, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Lipg lipase G, endothelial type IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:70,903,528...70,924,434
Ensembl chr18:70,901,710...70,924,708
JBrowse link
G Liph lipase H IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:82,680,167...82,732,145 JBrowse link
G Lipi lipase I IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:13,960,246...13,999,869
Ensembl chr11:13,960,246...13,999,862
JBrowse link
G Lpl lipoprotein lipase ISO
IBA
(PMID:182536)
PMID:21873635
RGD PMID:182536, PMID:21873635 RGD:13792537 NCBI chr16:22,537,687...22,561,487
Ensembl chr16:22,537,056...22,561,496
JBrowse link
G Mcat malonyl-CoA-acyl carrier protein transacylase ISO
IEA
IBA
(PMID:12882974)
GO_REF:0000041
PMID:21873635
RGD
UniProt
PMID:12882974, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 7:124,412,762...124,424,966
Ensembl chr 7:124,412,762...124,423,832
JBrowse link
G Mecr mitochondrial trans-2-enoyl-CoA reductase IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:150,001,281...150,027,407
Ensembl chr 5:150,001,281...150,027,049
JBrowse link
G Mgll monoglyceride lipase IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:120,671,436...120,773,458
Ensembl chr 4:120,671,489...120,771,088
JBrowse link
G Mlycd malonyl-CoA decarboxylase IMP
ISO
PMID:15105298
(PMID:15003260)
RGD PMID:15003260, PMID:15105298 RGD:1600796 NCBI chr19:52,032,950...52,048,773
Ensembl chr19:52,032,886...52,048,753
JBrowse link
G Ndufab1 NADH:ubiquinone oxidoreductase subunit AB1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:192,044,209...192,057,644
Ensembl chr 1:192,044,216...192,057,612
JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:10,462,380...10,466,496
Ensembl chr15:10,462,106...10,466,496
JBrowse link
G Pecr peroxisomal trans-2-enoyl-CoA reductase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 9:79,601,937...79,630,547
Ensembl chr 9:79,601,901...79,630,536
JBrowse link
G Pla2g1b phospholipase A2 group IB ISO
IBA
IDA
(PMID:1918029)
PMID:21873635
RGD PMID:1918029, PMID:21873635, PMID:1918029 RGD:13792537, RGD:8553780 NCBI chr12:46,879,346...46,890,234
Ensembl chr12:46,879,343...46,889,082
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:124,568,845...124,642,569
Ensembl chr 5:124,574,079...124,642,569
JBrowse link
G Prkab1 protein kinase AMP-activated non-catalytic subunit beta 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:46,316,298...46,326,789
Ensembl chr12:46,316,236...46,326,790
JBrowse link
G Prkab2 protein kinase AMP-activated non-catalytic subunit beta 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:199,831,990...199,847,623
Ensembl chr 2:199,831,990...199,847,629
JBrowse link
G Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:140,489,499...140,506,925
Ensembl chr 7:140,489,492...140,546,908
JBrowse link
G Scd stearoyl-CoA desaturase TAS
ISO
MGI:2388371 (MGI:2673743|PMID:12815040) RGD PMID:12815040, PMID:12896875 MGI:2673743, RGD:1304415 NCBI chr 1:264,159,966...264,173,061
Ensembl chr 1:264,160,129...264,172,729
JBrowse link
G Scd2 stearoyl-Coenzyme A desaturase 2 TAS RGD PMID:16207839 RGD:1580018 NCBI chr 1:264,059,374...264,072,433
Ensembl chr 1:264,059,374...264,072,433
JBrowse link
G Scd4 stearoyl-coenzyme A desaturase 4 ISO (MGI:2673743|PMID:12815040) RGD PMID:12815040 MGI:2673743 NCBI chr 1:264,094,007...264,105,473
Ensembl chr 1:264,094,080...264,105,344
JBrowse link
fatty acid elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 ISS
ISO
GO_REF:0000024
(MGI:6189658|PMID:26108493)
UniProt
RGD
PMID:26108493 GO_REF:0000024, MGI:6189658 NCBI chr  X:157,073,860...157,095,652
Ensembl chr  X:157,072,736...157,095,274
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 ISO (MGI:2153981|PMID:11567032) RGD PMID:11567032 MGI:2153981 NCBI chr 2:234,187,490...234,296,124
Ensembl chr 2:234,189,105...234,296,145
Ensembl chr 2:234,189,105...234,296,145
JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 ISO
IBA
(PMID:18554506)
PMID:21873635
RGD PMID:18554506, PMID:21873635 RGD:13792537 NCBI chr17:81,173,238...81,196,012
Ensembl chr17:81,173,713...81,187,739
JBrowse link
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 ISO
IBA
(PMID:18554506)
PMID:21873635
RGD PMID:18554506, PMID:21873635 RGD:13792537 NCBI chr11:68,893,684...68,985,635
Ensembl chr11:68,894,445...68,989,988
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 ISO
IBA
(PMID:18554506)
PMID:21873635
RGD PMID:18554506, PMID:21873635 RGD:13792537 NCBI chr 8:70,471,572...70,509,874
Ensembl chr 8:70,471,572...70,509,874
JBrowse link
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 ISO
IBA
(PMID:18554506)
PMID:21873635
RGD PMID:18554506, PMID:21873635 RGD:13792537 NCBI chr 5:106,728,401...106,758,068
Ensembl chr 5:106,732,513...106,758,032
JBrowse link
G Tecr trans-2,3-enoyl-CoA reductase ISO
ISS
(PMID:12482854)
GO_REF:0000024
RGD
UniProt
PMID:12482854 GO_REF:0000024 NCBI chr19:24,705,478...24,732,024
Ensembl chr19:24,705,481...24,732,024
JBrowse link
fatty acid elongation, monounsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 ISO
IBA
(PMID:20166112)
PMID:21873635
RGD PMID:20166112, PMID:21873635 RGD:13792537 NCBI chr 5:137,255,868...137,260,486
Ensembl chr 5:137,255,908...137,260,483
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:21,382,461...21,422,413
Ensembl chr17:21,382,455...21,422,407
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 ISO
IBA
(PMID:20937905)
PMID:21873635
(MGI:3033509|PMID:14581464)
RGD PMID:14581464, PMID:20937905, PMID:21873635 MGI:3033509, RGD:13792537 NCBI chr 1:265,883,353...265,887,181
Ensembl chr 1:265,883,355...265,887,226
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:91,310,690...91,338,625
Ensembl chr 8:91,310,630...91,338,843
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 ISO
IBA
ISS
(PMID:20427700)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20427700, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:85,220,941...85,287,449
Ensembl chr 8:85,259,982...85,285,983
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 IDA
IBA
PMID:12005057
PMID:21873635
UniProt
GO_Central
PMID:12005057, PMID:21873635 RGD:8554529, RGD:13792537 NCBI chr 2:234,187,490...234,296,124
Ensembl chr 2:234,189,105...234,296,145
Ensembl chr 2:234,189,105...234,296,145
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:40,373,211...40,386,643
Ensembl chr 2:40,373,211...40,386,669
JBrowse link
G LOC102549542 elongation of very long chain fatty acids protein 6-like IDA
IBA
PMID:12005057
PMID:21873635
UniProt
GO_Central
PMID:12005057, PMID:21873635 RGD:8554529, RGD:13792537 NCBI chr 2:234,375,172...234,486,639
Ensembl chr 2:234,375,315...234,483,149
JBrowse link
fatty acid elongation, polyunsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:137,255,868...137,260,486
Ensembl chr 5:137,255,908...137,260,483
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 ISO
IBA
(PMID:12371743), (PMID:20937905)
PMID:21873635
(MGI:4939101|PMID:21106902), (MGI:4943668|PMID:12371743)
RGD PMID:12371743, PMID:20937905, PMID:21106902, PMID:21873635 MGI:4939101, MGI:4943668, RGD:13792537 NCBI chr17:21,382,461...21,422,413
Ensembl chr17:21,382,455...21,422,407
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 ISO
IBA
(PMID:20937905)
PMID:21873635
RGD PMID:20937905, PMID:21873635 RGD:13792537 NCBI chr 1:265,883,353...265,887,181
Ensembl chr 1:265,883,355...265,887,226
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 ISO
IBA
(MGI:5471863|PMID:23479632)
PMID:21873635
RGD PMID:23479632, PMID:21873635 MGI:5471863, RGD:13792537 NCBI chr 8:91,310,690...91,338,625
Ensembl chr 8:91,310,630...91,338,843
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 IDA
IBA
ISO
PMID:12005057
PMID:21873635
(PMID:20427700), (PMID:20937905)
RGD PMID:20427700, PMID:20937905, PMID:12005057, PMID:21873635 RGD:8554529, RGD:13792537 NCBI chr 8:85,220,941...85,287,449
Ensembl chr 8:85,259,982...85,285,983
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:234,187,490...234,296,124
Ensembl chr 2:234,189,105...234,296,145
Ensembl chr 2:234,189,105...234,296,145
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 ISO
IBA
IEA
(PMID:20937905)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:20937905, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:40,373,211...40,386,643
Ensembl chr 2:40,373,211...40,386,669
JBrowse link
G LOC102549542 elongation of very long chain fatty acids protein 6-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:234,375,172...234,486,639
Ensembl chr 2:234,375,315...234,483,149
JBrowse link
fatty acid elongation, saturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 ISO
IBA
(PMID:20166112), (PMID:20937905)
PMID:21873635
RGD PMID:20166112, PMID:20937905, PMID:21873635 RGD:13792537 NCBI chr 5:137,255,868...137,260,486
Ensembl chr 5:137,255,908...137,260,483
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:21,382,461...21,422,413
Ensembl chr17:21,382,455...21,422,407
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 ISO
IBA
(PMID:20937905)
PMID:21873635
(MGI:3033509|PMID:14581464)
RGD PMID:14581464, PMID:20937905, PMID:21873635 MGI:3033509, RGD:13792537 NCBI chr 1:265,883,353...265,887,181
Ensembl chr 1:265,883,355...265,887,226
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 ISO
IBA
(PMID:20937905)
PMID:21873635
RGD PMID:20937905, PMID:21873635 RGD:13792537 NCBI chr 8:91,310,690...91,338,625
Ensembl chr 8:91,310,630...91,338,843
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:85,220,941...85,287,449
Ensembl chr 8:85,259,982...85,285,983
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 IDA
IBA
ISO
PMID:12005057
PMID:21873635
UniProtKB:Q9VV87 (PMID:20937905), (PMID:26214738)
RGD PMID:20937905, PMID:26214738, PMID:12005057, PMID:21873635 RGD:8554529, RGD:13792537 NCBI chr 2:234,187,490...234,296,124
Ensembl chr 2:234,189,105...234,296,145
Ensembl chr 2:234,189,105...234,296,145
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 ISO
IBA
IEA
(PMID:19826053)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:19826053, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:40,373,211...40,386,643
Ensembl chr 2:40,373,211...40,386,669
JBrowse link
G LOC102549542 elongation of very long chain fatty acids protein 6-like IDA
IBA
PMID:12005057
PMID:21873635
UniProt
GO_Central
PMID:12005057, PMID:21873635 RGD:8554529, RGD:13792537 NCBI chr 2:234,375,172...234,486,639
Ensembl chr 2:234,375,315...234,483,149
JBrowse link
glycolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase ISO
ISS
(PMID:22523093)
(MGI:5582151|PMID:22523093)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:22523093 GO_REF:0000024, MGI:5582151 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
hepoxilin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type IDA
IBA
PMID:23382512
PMID:21873635
UniProt
GO_Central
PMID:23382512, PMID:21873635 RGD:8554649, RGD:13792537 NCBI chr10:56,851,734...56,864,049
Ensembl chr10:56,851,734...56,864,005
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type IDA
IBA
PMID:23382512
PMID:21873635
UniProt
GO_Central
PMID:23382512, PMID:21873635 RGD:8554649, RGD:13792537 NCBI chr10:55,744,646...55,756,524
Ensembl chr10:55,744,588...55,756,566
JBrowse link
G Alox12e arachidonate 12-lipoxygenase, epidermal IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:56,927,676...56,935,141
Ensembl chr10:56,927,676...56,935,141
JBrowse link
G Alox15 arachidonate 15-lipoxygenase IDA
IBA
PMID:21873635
PMID:23382512
RGD
GO_Central
UniProt
PMID:15123652, PMID:21873635, PMID:23382512 RGD:5509794, RGD:13792537, RGD:8554649 NCBI chr10:56,953,692...56,962,145
Ensembl chr10:56,953,691...56,962,161
JBrowse link
G Alox15b arachidonate 15-lipoxygenase, type B IDA
IBA
PMID:23382512
PMID:21873635
UniProt
GO_Central
PMID:23382512, PMID:21873635 RGD:8554649, RGD:13792537 NCBI chr10:55,773,748...55,783,489
Ensembl chr10:55,774,006...55,783,489
JBrowse link
G Alox5 arachidonate 5-lipoxygenase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:148,398,004...148,446,308
Ensembl chr 4:148,398,892...148,446,303
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 IDA
IBA
ISO
PMID:23382512
PMID:21873635
(MGI:3694035|PMID:17045234), (MGI:5488571|PMID:22832496)
(PMID:12881489), (PMID:17045234)
RGD PMID:12881489, PMID:17045234, PMID:22832496, PMID:23382512, PMID:21873635 MGI:3694035, MGI:5488571, RGD:8554649, RGD:13792537 NCBI chr10:55,711,996...55,735,915
Ensembl chr10:55,712,043...55,735,911
JBrowse link
G Gstm1 glutathione S-transferase mu 1 ISS
ISO
GO_REF:0000024
(PMID:21046276)
UniProt
RGD
PMID:21046276 GO_REF:0000024 NCBI chr 2:210,803,869...210,809,461
Ensembl chr 2:210,803,869...210,809,306
JBrowse link
G Gstm2 glutathione S-transferase mu 2 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21046276)
UniProt
Ensembl
RGD
PMID:21046276 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:210,778,041...210,782,807
Ensembl chr 2:210,720,704...210,782,856
JBrowse link
G Gstm7 glutathione S-transferase, mu 7 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:210,720,719...210,726,179
Ensembl chr 2:210,720,704...210,782,856
JBrowse link
G Gstp1 glutathione S-transferase pi 1 ISS
ISO
GO_REF:0000024
(PMID:21046276)
UniProt
RGD
PMID:21046276 GO_REF:0000024 NCBI chr 1:219,291,679...219,294,147
Ensembl chr 1:219,291,679...219,294,147
JBrowse link
kynurenic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ido1 indoleamine 2,3-dioxygenase 1 IEA
ISO
GO_REF:0000107
MGI:3505776 (MGI:3837074|PMID:19234212)
Ensembl
RGD
PMID:19234212 GO_REF:0000107, MGI:3837074 NCBI chr16:72,216,326...72,228,098
Ensembl chr16:72,216,326...72,228,098
JBrowse link
G Kmo kynurenine 3-monooxygenase IMP RGD PMID:15829251 RGD:13513901 NCBI chr13:93,684,324...93,715,378
Ensembl chr13:93,684,437...93,716,227
JBrowse link
lactate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ins2 insulin 2 ISO (PMID:8069456) RGD PMID:8069456 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
G Park7 Parkinsonism associated deglycase ISO (PMID:22523093) RGD PMID:22523093 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
G Per2 period circadian regulator 2 ISS
ISO
GO_REF:0000024
(MGI:5546525|PMID:23977055)
UniProt
RGD
PMID:23977055 GO_REF:0000024, MGI:5546525 NCBI chr 9:98,555,154...98,597,362
Ensembl chr 9:98,555,169...98,597,359
JBrowse link
lactate biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htt huntingtin ISO (MGI:3757902|PMID:17708681) RGD PMID:17708681 MGI:3757902 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
JBrowse link
G Ldhc lactate dehydrogenase C IEA
ISO
GO_REF:0000107
(MGI:3775056|PMID:18367675)
Ensembl
RGD
PMID:18367675 GO_REF:0000107, MGI:3775056 NCBI chr 1:102,914,875...102,931,843
Ensembl chr 1:102,915,191...102,931,839
JBrowse link
leukotriene A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase ISO
IEA
ISS
(PMID:24282679), (PMID:31664810)
(MGI:6392995|PMID:31642348)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:24282679, PMID:31642348, PMID:31664810 GO_REF:0000024, GO_REF:0000107, MGI:6392995 NCBI chr 4:148,398,004...148,446,308
Ensembl chr 4:148,398,892...148,446,303
JBrowse link
lipoate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lias lipoic acid synthetase ISO
IBA
UniProtKB:P60716 (MGI:2135807|PMID:11389890)
PMID:21873635
RGD PMID:11389890, PMID:21873635 MGI:2135807, RGD:13792537 NCBI chr14:44,507,217...44,524,287
Ensembl chr14:44,507,218...44,524,252
JBrowse link
lipoxin A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type ISO
ISS
(PMID:8250832)
GO_REF:0000024
RGD
UniProt
PMID:8250832 GO_REF:0000024 NCBI chr10:56,851,734...56,864,049
Ensembl chr10:56,851,734...56,864,005
JBrowse link
G Alox15 arachidonate 15-lipoxygenase ISS
ISO
GO_REF:0000024
(MGI:3579746|PMID:15708862)
UniProt
RGD
PMID:15708862 GO_REF:0000024, MGI:3579746 NCBI chr10:56,953,692...56,962,145
Ensembl chr10:56,953,691...56,962,161
JBrowse link
G Alox15b arachidonate 15-lipoxygenase, type B ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27145229)
UniProt
Ensembl
RGD
PMID:27145229 GO_REF:0000024, GO_REF:0000107 NCBI chr10:55,773,748...55,783,489
Ensembl chr10:55,774,006...55,783,489
JBrowse link
lipoxin B4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type ISO
ISS
(PMID:8250832)
GO_REF:0000024
RGD
UniProt
PMID:8250832 GO_REF:0000024 NCBI chr10:56,851,734...56,864,049
Ensembl chr10:56,851,734...56,864,005
JBrowse link
long-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsbg1 acyl-CoA synthetase bubblegum family member 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11381125, PMID:21873635 RGD:68727, RGD:13792537 NCBI chr 8:59,184,111...59,240,133
Ensembl chr 8:59,184,113...59,239,954
JBrowse link
G Acsbg2 acyl-CoA synthetase bubblegum family member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:10,172,317...10,203,550
Ensembl chr 9:10,172,832...10,203,460
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:250,557,042...250,665,083
Ensembl chr 1:250,557,044...250,630,677
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 ISO
ISS
(PMID:20937905)
GO_REF:0000024
RGD
UniProt
PMID:20937905 GO_REF:0000024 NCBI chr 2:234,187,490...234,296,124
Ensembl chr 2:234,189,105...234,296,145
Ensembl chr 2:234,189,105...234,296,145
JBrowse link
G Fads1 fatty acid desaturase 1 ISO (PMID:10601301) RGD PMID:10601301 NCBI chr 1:226,234,034...226,249,118
Ensembl chr 1:226,234,074...226,249,138
JBrowse link
G Gstm4 glutathione S-transferase mu 4 ISS
ISO
GO_REF:0000024
(PMID:27791009)
UniProt
RGD
PMID:27791009 GO_REF:0000024 NCBI chr 2:210,834,013...210,839,242
Ensembl chr 2:210,833,884...210,839,295
JBrowse link
G LOC102549542 elongation of very long chain fatty acids protein 6-like ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:234,375,172...234,486,639
Ensembl chr 2:234,375,315...234,483,149
JBrowse link
G LOC108348175 protein quaking-like IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:50,828,585...50,936,459 JBrowse link
G LOC316124 similar to gonadotropin-regulated long chain acyl-CoA synthetase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:10,158,745...10,188,013
Ensembl chr 9:10,158,748...10,182,676
JBrowse link
G Ltc4s leukotriene C4 synthase ISS
ISO
GO_REF:0000024
(PMID:27791009)
UniProt
RGD
PMID:27791009 GO_REF:0000024 NCBI chr10:35,736,486...35,743,088
Ensembl chr10:35,737,664...35,739,625
JBrowse link
G Myo5a myosin VA IEA
ISO
GO_REF:0000107
MGI:1856005 (MGI:3619818|PMID:1150661)
Ensembl
RGD
PMID:1150661 GO_REF:0000107, MGI:3619818 NCBI chr 8:82,038,966...82,156,507
Ensembl chr 8:82,037,977...82,156,617
JBrowse link
G Plp1 proteolipid protein 1 ISO MGI:1856065 (MGI:3619818|PMID:1150661) RGD PMID:1150661 MGI:3619818 NCBI chr  X:107,494,326...107,511,355
Ensembl chr  X:107,496,072...107,511,348
JBrowse link
G Qk quaking ISO MGI:1856539 (MGI:3619818|PMID:1150661) RGD PMID:1150661 MGI:3619818 NCBI chr 1:50,983,647...51,050,692 JBrowse link
medium-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd1 abhydrolase domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:26,787,807...26,792,795
Ensembl chr 6:26,784,058...26,792,808
JBrowse link
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:140,998,240...141,087,405
Ensembl chr 1:140,998,240...141,087,405
JBrowse link
G Abhd3 abhydrolase domain containing 3, phospholipase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:1,892,413...1,946,840
Ensembl chr18:1,892,413...1,946,840
JBrowse link
G Acot7 acyl-CoA thioesterase 7 ISO (PMID:10578051) RGD PMID:10578051 NCBI chr 5:169,357,582...169,450,215
Ensembl chr 5:169,357,517...169,450,219
JBrowse link
G Olah oleoyl-ACP hydrolase IDA
ISO
PMID:8446599
(PMID:26663084)
RGD PMID:26663084, PMID:8446599 RGD:13524614 NCBI chr17:78,878,673...78,903,919
Ensembl chr17:78,879,058...78,903,967
JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial ISO (PMID:15668256) RGD PMID:15668256 NCBI chr15:10,462,380...10,466,496
Ensembl chr15:10,462,106...10,466,496
JBrowse link
negative regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf19 fibroblast growth factor 19 ISO (PMID:12815072)
MGI:1928271 (MGI:5501367|PMID:23747249)
RGD PMID:12815072, PMID:23747249 MGI:5501367 NCBI chr 1:218,058,405...218,061,693
Ensembl chr 1:218,058,405...218,061,693
JBrowse link
G Malrd1 MAM and LDL receptor class A domain containing 1 ISO MGI:1096383|MGI:2154956 (MGI:5501367|PMID:23747249) RGD PMID:23747249 MGI:5501367 NCBI chr17:82,430,836...83,156,696
Ensembl chr17:82,430,836...82,953,864
JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:16488887) RGD PMID:16488887 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
negative regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain ISO (MGI:3526480|PMID:15639194) RGD PMID:15639194 MGI:3526480 NCBI chr 9:73,833,368...73,871,857
Ensembl chr 9:73,833,388...73,871,888
JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain IEA
ISO
GO_REF:0000107
(MGI:3526480|PMID:15639194)
Ensembl
RGD
PMID:15639194 GO_REF:0000107, MGI:3526480 NCBI chr10:56,619,321...56,624,468
Ensembl chr10:56,619,303...56,624,526
JBrowse link
G Apoc1 apolipoprotein C1 ISO (PMID:15576844) RGD PMID:15576844 NCBI chr 1:80,606,638...80,609,921
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
G Apoc3 apolipoprotein C3 IEA
ISO
GO_REF:0000107
(PMID:11060345), (PMID:18635818)
Ensembl
RGD
PMID:11060345, PMID:18635818 GO_REF:0000107 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
G Brca1 BRCA1, DNA repair associated IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:16326698)
Ensembl
UniProt
RGD
PMID:16326698, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 IMP PMID:16054098 UniProt PMID:16054098 RGD:11059593 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 IDA PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chr 5:19,358,734...19,368,431
Ensembl chr 5:19,358,734...19,368,431
JBrowse link
G Erlin1 ER lipid raft associated 1 ISO (PMID:24217618) RGD PMID:24217618 NCBI chr 1:263,810,439...263,845,762
Ensembl chr 1:263,810,439...263,845,762
JBrowse link
G Erlin2 ER lipid raft associated 2 ISO (PMID:24217618) RGD PMID:24217618 NCBI chr16:69,179,005...69,195,452
Ensembl chr16:69,179,588...69,195,097
JBrowse link
G Insig1 insulin induced gene 1 ISO MGI:1920249 (MGI:3603108|PMID:16100574) RGD PMID:16100574 MGI:3603108 NCBI chr 4:342,302...350,515
Ensembl chr 4:342,302...350,515
JBrowse link
G Insig2 insulin induced gene 2 ISO MGI:1916289 (MGI:3603108|PMID:16100574) RGD PMID:16100574 MGI:3603108 NCBI chr13:37,264,818...37,292,718
Ensembl chr13:37,266,312...37,287,458
JBrowse link
G Trib3 tribbles pseudokinase 3 ISO (MGI:3630230|PMID:16794074) RGD PMID:16794074 MGI:3630230 NCBI chr 3:147,814,056...147,819,650
Ensembl chr 3:147,813,473...147,819,571
JBrowse link
G Wdtc1 WD and tetratricopeptide repeats 1 ISO
IBA
(MGI:3770497|PMID:17767906)
PMID:21873635
RGD PMID:17767906, PMID:21873635 MGI:3770497, RGD:13792537 NCBI chr 5:151,487,572...151,536,829
Ensembl chr 5:151,487,577...151,536,518
JBrowse link
negative regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pibf1 progesterone immunomodulatory binding factor 1 ISO (PMID:3863495) RGD PMID:3863495 NCBI chr15:83,494,110...83,663,202
Ensembl chr15:83,495,377...83,663,143
JBrowse link
G Sirt1 sirtuin 1 ISO (MGI:5306564|PMID:20042607) RGD PMID:20042607 MGI:5306564 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1c3 aldo-keto reductase family 1, member C3 ISO (PMID:21851338) RGD PMID:21851338 NCBI chr17:69,761,126...69,778,021
Ensembl chr17:69,761,118...69,778,021
JBrowse link
palmitic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 ISO
IBA
(PMID:10578051)
PMID:21873635
RGD PMID:10578051, PMID:21873635 RGD:13792537 NCBI chr 5:169,357,582...169,450,215
Ensembl chr 5:169,357,517...169,450,219
JBrowse link
positive regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:3819720|PMID:18565334), (MGI:4360821|PMID:19721697)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18565334, PMID:19721697 GO_REF:0000024, GO_REF:0000107, MGI:3819720, MGI:4360821 NCBI chr10:86,683,875...86,690,815
Ensembl chr10:86,683,875...86,690,815
JBrowse link
G Star steroidogenic acute regulatory protein ISO (PMID:18403318) RGD PMID:18403318 NCBI chr16:71,036,204...71,040,847
Ensembl chr16:71,036,204...71,040,847
JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 ISO (PMID:18403318) RGD PMID:18403318 NCBI chr18:25,982,210...25,997,555
Ensembl chr18:25,984,638...25,997,555
JBrowse link
positive regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO (MGI:2154640|PMID:11606482) RGD PMID:11606482 MGI:2154640 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Apoa1 apolipoprotein A1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa4 apolipoprotein A4 ISO
IBA
IEA
(PMID:2307668)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:2307668, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Apoa5 apolipoprotein A5 ISO
IBA
IEA
(PMID:18635818)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:18635818, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:50,559,079...50,561,720
Ensembl chr 8:50,559,126...50,561,736
JBrowse link
G Apoc2 apolipoprotein C2 ISO (PMID:10727238) RGD PMID:10727238 NCBI chr 1:80,589,023...80,593,991
Ensembl chr 1:80,589,023...80,594,136
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 ISO (PMID:23749231) RGD PMID:23749231 NCBI chr 8:85,220,941...85,287,449
Ensembl chr 8:85,259,982...85,285,983
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IMP RGD PMID:16800817 RGD:1624995 NCBI chr 3:159,902,441...159,965,003
Ensembl chr 3:159,902,441...159,965,003
JBrowse link
G Ins2 insulin 2 ISO (PMID:14677856) RGD PMID:14677856 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
G Lpgat1 lysophosphatidylglycerol acyltransferase 1 ISO (PMID:23749231) RGD PMID:23749231 NCBI chr13:110,397,353...110,470,874
Ensembl chr13:110,398,800...110,467,834
JBrowse link
G Mid1ip1 MID1 interacting protein 1 ISS
ISO
GO_REF:0000024
(MGI:4454592|PMID:20457939)
UniProt
RGD
PMID:20457939 GO_REF:0000024, MGI:4454592 NCBI chr  X:13,114,557...13,119,274
Ensembl chr  X:13,114,569...13,116,743
JBrowse link
G Mlxipl MLX interacting protein-like ISO (MGI:3041761|PMID:15118080) RGD PMID:15118080 MGI:3041761 NCBI chr12:24,590,645...24,619,639 JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 ISO (PMID:17186944) RGD PMID:17186944 NCBI chr 1:100,554,577...100,559,896
Ensembl chr 1:100,554,544...100,559,942
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 ISO (PMID:17186944) RGD PMID:17186944 NCBI chr 3:80,004,130...80,014,197
Ensembl chr 3:80,004,130...80,012,750
JBrowse link
G Rgn regucalcin IDA RGD PMID:16817230 RGD:9590221 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904
JBrowse link
G Slc45a3 solute carrier family 45, member 3 ISO (MGI:5464987|PMID:22521588) RGD PMID:22521588 MGI:5464987 NCBI chr13:48,745,855...48,766,283
Ensembl chr13:48,745,860...48,766,283
JBrowse link
positive regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:8260938, PMID:21873635 RGD:2306959, RGD:13792537 NCBI chr 1:237,893,983...237,910,002
Ensembl chr 1:237,893,966...237,910,012
JBrowse link
G Avp arginine vasopressin IMP RGD PMID:17254553 RGD:2300349 NCBI chr 3:123,117,482...123,119,460
Ensembl chr 3:123,117,492...123,119,460
JBrowse link
G Avpr1a arginine vasopressin receptor 1A IMP RGD PMID:17254553 RGD:2300349 NCBI chr 7:67,341,366...67,345,290
Ensembl chr 7:67,341,080...67,345,308
JBrowse link
G Cd74 CD74 molecule ISO (PMID:24569872) RGD PMID:24569872 NCBI chr18:56,071,420...56,080,851
Ensembl chr18:56,071,478...56,080,849
JBrowse link
G Il1b interleukin 1 beta IEA
ISO
GO_REF:0000107
RNAcentral:URS0000424278_9606 (PMID:29384235)
Ensembl
RGD
PMID:29384235 GO_REF:0000107 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IMP RGD PMID:9786861 RGD:2304243 NCBI chr10:35,333,859...35,374,364
Ensembl chr10:35,333,859...35,374,355
JBrowse link
G Pla2g3 phospholipase A2, group III ISO (PMID:23624557)
(MGI:5492190|PMID:23624557)
RGD PMID:23624557 MGI:5492190 NCBI chr14:83,724,828...83,730,614
Ensembl chr14:83,724,933...83,730,614
JBrowse link
G Pla2g4a phospholipase A2 group IVA IMP RGD PMID:16203828 RGD:1642461 NCBI chr13:67,062,252...67,206,688
Ensembl chr13:66,988,937...67,206,693
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO (PMID:21716255)
(MGI:5474549|PMID:21716255)
RGD PMID:21716255 MGI:5474549 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
positive regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh10 retinol dehydrogenase 10 IMP RGD PMID:21138835 RGD:6771354 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
G Rdh16 retinol dehydrogenase 16 IMP RGD PMID:21138835 RGD:6771354 NCBI chr 7:71,058,150...71,072,685
Ensembl chr 7:70,980,422...71,072,689
JBrowse link
positive regulation of unsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 ISO (MGI:3835692|PMID:18854420) RGD PMID:18854420 MGI:3835692 NCBI chr  X:157,073,860...157,095,652
Ensembl chr  X:157,072,736...157,095,274
JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 ISS
ISO
GO_REF:0000024
(MGI:3835692|PMID:18854420)
UniProt
RGD
PMID:18854420 GO_REF:0000024, MGI:3835692 NCBI chr 7:132,294,564...132,343,169
Ensembl chr 7:132,294,562...132,343,169
JBrowse link
propionate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short-chain family member 1 IDA RGD PMID:4334748 RGD:2317572 NCBI chr 3:146,420,346...146,470,293
Ensembl chr 3:146,420,346...146,470,293
JBrowse link
G Acss2 acyl-CoA synthetase short-chain family member 2 IDA RGD PMID:4334748 RGD:2317572 NCBI chr 3:151,032,925...151,075,856
Ensembl chr 3:151,032,952...151,075,856
JBrowse link
prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034131.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:54,829,620...54,830,081 JBrowse link
G AABR07054614.1 IBA
IEA
PMID:21873635
GO_REF:0000043
UniProt PMID:21873635 GO_REF:0000043, RGD:13792537 Ensembl chr 3:163,950,777...163,986,059 JBrowse link
G Cd74 CD74 molecule ISO
ISS
(PMID:12782713)
GO_REF:0000024
RGD
UniProt
PMID:12782713 GO_REF:0000024 NCBI chr18:56,071,420...56,080,851
Ensembl chr18:56,071,478...56,080,849
JBrowse link
G Daglb diacylglycerol lipase, beta ISS
ISO
IEA
GO_REF:0000024
(MGI:6414691|PMID:23103940)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23103940 GO_REF:0000024, GO_REF:0000107, MGI:6414691 NCBI chr12:13,113,073...13,157,748
Ensembl chr12:13,113,237...13,157,666
JBrowse link
G Edn1 endothelin 1 ISO (PMID:9492062) RGD PMID:9492062 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Edn2 endothelin 2 ISO
IEA
(PMID:9492062)
(MGI:3847878|PMID:9492062)
GO_REF:0000107
RGD
Ensembl
PMID:9492062 GO_REF:0000107, MGI:3847878 NCBI chr 5:139,098,472...139,106,396
Ensembl chr 5:139,100,898...139,105,792
JBrowse link
G Hpgds hematopoietic prostaglandin D synthase TAS RGD PMID:9323136 RGD:68838 NCBI chr 4:95,945,356...95,970,666
Ensembl chr 4:95,946,025...95,970,666
JBrowse link
G Mif macrophage migration inhibitory factor ISO (PMID:12782713) RGD PMID:12782713 NCBI chr20:13,715,219...13,732,980
Ensembl chr20:13,732,198...13,732,859
JBrowse link
G Pla2g10 phospholipase A2, group X IEA
ISO
GO_REF:0000107
(MGI:5818640|PMID:27292189)
Ensembl
RGD
PMID:27292189 GO_REF:0000107, MGI:5818640 NCBI chr10:1,509,732...1,520,970
Ensembl chr10:1,509,732...1,520,970
JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO
IEA
ISS
(PMID:18451993), (PMID:27642067)
(MGI:1100762|PMID:9403692), (MGI:1100763|PMID:9403693)
GO_REF:0000041
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:9403692, PMID:9403693, PMID:18451993, PMID:27642067 GO_REF:0000024, GO_REF:0000041, GO_REF:0000107, MGI:1100762, MGI:1100763 NCBI chr13:67,062,252...67,206,688
Ensembl chr13:66,988,937...67,206,693
JBrowse link
G Pla2g4f phospholipase A2, group IVF ISO (MGI:3709446|PMID:17293613) RGD PMID:17293613 MGI:3709446 NCBI chr 3:112,068,617...112,083,978
Ensembl chr 3:112,072,330...112,084,144
JBrowse link
G Pnpla8 patatin-like phospholipase domain containing 8 ISO (PMID:15695510) RGD PMID:15695510 NCBI chr 6:64,224,870...64,288,465
Ensembl chr 6:64,224,861...64,286,785
JBrowse link
G Prxl2b peroxiredoxin like 2B ISS
ISO
GO_REF:0000024
(MGI:3771130|PMID:18006499)
(PMID:18006499)
UniProt
RGD
PMID:18006499, PMID:18006499 GO_REF:0000024, MGI:3771130, RGD:8552775 NCBI chr 5:172,304,799...172,307,402
Ensembl chr 5:172,304,758...172,307,431
JBrowse link
G Ptgds prostaglandin D2 synthase IDA
ISO
PMID:7836410
(MGI:3761957|PMID:17715133)
(PMID:20347284), (PMID:20667974)
RGD PMID:17715133, PMID:20347284, PMID:20667974, PMID:7836410 MGI:3761957, RGD:8553429 NCBI chr 3:2,686,125...2,689,059
Ensembl chr 3:2,686,123...2,689,084
JBrowse link
G Ptges prostaglandin E synthase TAS
IBA
ISO
IEA
IDA
PMID:21873635
(MGI:6393388|PMID:11795891)
GO_REF:0000041
(PMID:25726376)
(PMID:18682561)
RGD
UniProt
PMID:11795891, PMID:18682561, PMID:25726376, PMID:11067848, PMID:21873635, PMID:11067848 GO_REF:0000041, MGI:6393388, RGD:67929, RGD:13792537, RGD:67929 NCBI chr 3:9,727,408...9,738,752
Ensembl chr 3:9,727,408...9,738,752
JBrowse link
G Ptges2 prostaglandin E synthase 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:11,424,195...11,431,379
Ensembl chr 3:11,424,099...11,431,402
JBrowse link
G Ptges3 prostaglandin E synthase 3 IMP
IBA
ISO
ISS
IEA
IDA
PMID:21873635
MGI:3701300 (MGI:3714109|PMID:17438133)
GO_REF:0000024
(PMID:10922363)
GO_REF:0000041
RGD
UniProt
PMID:10922363, PMID:17438133, PMID:10922363, PMID:21873635, PMID:10922363 GO_REF:0000024, GO_REF:0000041, MGI:3714109, RGD:5688071, RGD:13792537, RGD:5688071 NCBI chr 7:2,479,267...2,497,024
Ensembl chr 7:2,479,311...2,497,013
JBrowse link
G Ptges3l1 prostaglandin E synthase 3-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:45,410,545...45,419,817
Ensembl chr  X:45,410,546...45,419,817
JBrowse link
G Ptgis prostaglandin I2 synthase TAS
IBA
ISO
ISS
IDA
PMID:21873635
(PMID:15115769), (PMID:20122998), (PMID:21296955)
GO_REF:0000024
RGD
UniProt
PMID:15115769, PMID:20122998, PMID:21296955, PMID:10359560, PMID:21873635, PMID:16094316 GO_REF:0000024, RGD:727270, RGD:13792537, RGD:8693629 NCBI chr 3:163,950,746...163,986,129 JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 IMP
ISO
ISS
MGI:1857238 (MGI:2181847|PMID:12093889)
GO_REF:0000024
RGD
UniProt
PMID:12093889, PMID:17673564 GO_REF:0000024, MGI:2181847, RGD:2300259 NCBI chr 3:15,560,685...15,582,339
Ensembl chr 3:15,560,712...15,582,344
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP
ISO
(MGI:5315361|PMID:12925531)
(PMID:27642067)
RGD PMID:12925531, PMID:27642067, PMID:17673564 MGI:5315361, RGD:2300259 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Tbxas1 thromboxane A synthase 1 ISO
ISS
(PMID:11097184)
GO_REF:0000024
RGD
UniProt
PMID:11097184 GO_REF:0000024 NCBI chr 4:66,624,181...66,846,745
Ensembl chr 4:66,670,618...66,846,805
JBrowse link
protein deglycation, glyoxal removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase ISO
IEA
IBA
(PMID:25416785)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:25416785, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
protein deglycation, methylglyoxal removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase NOT ISO
ISS
IEA
(PMID:27903648)
GO_REF:0000024
(PMID:25416785), (PMID:30150385)
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:25416785, PMID:27903648, PMID:30150385 GO_REF:0000024, GO_REF:0000107 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
pyruvate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase IDA RGD PMID:12383475 RGD:1599457 NCBI chr 9:100,281,339...100,291,292
Ensembl chr 9:100,281,339...100,291,291
JBrowse link
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 ISO (PMID:21998747) RGD PMID:21998747 NCBI chr 1:261,291,742...261,319,743
Ensembl chr 1:261,291,870...261,318,984
JBrowse link
G Pklr pyruvate kinase L/R IDA RGD PMID:5492954, PMID:4273555 RGD:2302789, RGD:2302790 NCBI chr 2:188,449,158...188,458,034
Ensembl chr 2:188,449,210...188,459,592
JBrowse link
G Pkm pyruvate kinase M1/2 IDA RGD PMID:4273555 RGD:2302790 NCBI chr 8:64,480,963...64,502,957
Ensembl chr 8:64,481,172...64,502,722
JBrowse link
G Sds serine dehydratase IEA
ISO
GO_REF:0000107
(PMID:15689518)
Ensembl
RGD
PMID:15689518 GO_REF:0000107 NCBI chr12:41,620,429...41,627,741
Ensembl chr12:41,620,393...41,627,741
JBrowse link
G Srr serine racemase ISO
IBA
(PMID:18812225)
PMID:21873635
RGD PMID:18812225, PMID:21873635 RGD:13792537 NCBI chr10:61,756,138...61,772,327
Ensembl chr10:61,756,138...61,772,293
JBrowse link
regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1d carboxylesterase 1D ISO (PMID:18599737) RGD PMID:18599737 NCBI chr19:15,195,514...15,239,827
Ensembl chr19:15,033,108...15,239,821
JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 IDA
ISO
PMID:1694852
(PMID:19965590)
RGD PMID:19965590, PMID:1694852 RGD:70534 NCBI chr 5:19,358,734...19,368,431
Ensembl chr 5:19,358,734...19,368,431
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:1858658|PMID:10809780)
(PMID:17623664), (PMID:20683963)
UniProt
RGD
PMID:10809780, PMID:17623664, PMID:20683963, PMID:21873635 GO_REF:0000024, MGI:1858658, RGD:13792537 NCBI chr17:9,990,072...10,004,339
Ensembl chr17:9,990,078...10,004,321
JBrowse link
G Sirt1 sirtuin 1 ISO (MGI:5014028|PMID:20375098) RGD PMID:20375098 MGI:5014028 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif6 eukaryotic translation initiation factor 6 IEA
ISO
ISS
GO_REF:0000107
(MGI:5699484|PMID:26383020)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26383020 GO_REF:0000024, GO_REF:0000107, MGI:5699484 NCBI chr 3:151,356,867...151,363,201
Ensembl chr 3:151,356,868...151,363,115
JBrowse link
G Gip gastric inhibitory polypeptide IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:83,835,080...83,848,399
Ensembl chr10:83,840,303...83,848,396
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 IEA
ISO
ISS
GO_REF:0000107
(MGI:4420379|PMID:19627255)
GO_REF:0000024
(PMID:21852536)
Ensembl
RGD
UniProt
PMID:19627255, PMID:21852536 GO_REF:0000024, GO_REF:0000107, MGI:4420379 NCBI chr 4:30,546,772...30,556,774
Ensembl chr 4:30,546,664...30,556,814
JBrowse link
G Scap SREBF chaperone ISO MGI:2148743|MGI:2180899 (MGI:3770209|PMID:16054043) RGD PMID:16054043 MGI:3770209 NCBI chr 8:118,551,869...118,628,650
Ensembl chr 8:118,570,503...118,628,651
JBrowse link
regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp5 fatty acid binding protein 5 ISO (MGI:6157571|PMID:29440395) RGD PMID:29440395 MGI:6157571 NCBI chr 2:93,981,662...93,985,322
Ensembl chr 2:93,981,656...93,985,378
JBrowse link
retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 IMP RGD PMID:21138835 RGD:6771354 NCBI chr 1:238,222,689...238,264,381
Ensembl chr 1:238,222,521...238,264,330
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 IEP
ISO
ISS
IMP
(PMID:29240402)
GO_REF:0000024
RGD
UniProt
PMID:29240402, PMID:15950969, PMID:21138835 GO_REF:0000024, RGD:6771322, RGD:6771354 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 IEP
ISO
ISS
IEA
IMP
(MGI:1927016|PMID:11044606), (MGI:3042765|PMID:14623956), (MGI:3055622|PMID:11013254), (MGI:3692370|PMID:16241904)
GO_REF:0000024
(PMID:27759097)
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:11013254, PMID:11044606, PMID:14623956, PMID:16241904, PMID:27759097, PMID:15950969, PMID:21138835 GO_REF:0000024, GO_REF:0000107, MGI:1927016, MGI:3042765, MGI:3055622, MGI:3692370, RGD:6771322, RGD:6771354 NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882
JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 IEP RGD PMID:15950969 RGD:6771322 NCBI chr 2:187,322,416...187,326,794
Ensembl chr 2:184,882,969...184,883,505
JBrowse link
G Dhrs9 dehydrogenase/reductase 9 IEP
IDA
RGD PMID:15950969, PMID:21138835 RGD:6771322, RGD:6771354 NCBI chr 3:55,623,671...55,645,883
Ensembl chr 3:55,623,634...55,648,325
JBrowse link
G Rbp1 retinol binding protein 1 IEP RGD PMID:15950969 RGD:6771322 NCBI chr 8:106,449,321...106,470,842
Ensembl chr 8:106,449,321...106,470,842
JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
short-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial ISO (PMID:15668256) RGD PMID:15668256 NCBI chr15:10,462,380...10,466,496
Ensembl chr15:10,462,106...10,466,496
JBrowse link
unsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Decr2 2,4-dienoyl-CoA reductase 2 ISO (PMID:11514237) RGD PMID:11514237 NCBI chr10:15,451,850...15,460,227
Ensembl chr10:15,431,638...15,465,413
JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 5:137,255,868...137,260,486
Ensembl chr 5:137,255,908...137,260,483
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:21,382,461...21,422,413
Ensembl chr17:21,382,455...21,422,407
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:265,883,353...265,887,181
Ensembl chr 1:265,883,355...265,887,226
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:91,310,690...91,338,625
Ensembl chr 8:91,310,630...91,338,843
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:85,220,941...85,287,449
Ensembl chr 8:85,259,982...85,285,983
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:234,187,490...234,296,124
Ensembl chr 2:234,189,105...234,296,145
Ensembl chr 2:234,189,105...234,296,145
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:40,373,211...40,386,643
Ensembl chr 2:40,373,211...40,386,669
JBrowse link
G Fads1 fatty acid desaturase 1 IDA
ISO
IEA
(PMID:10601301)
GO_REF:0000041
RGD
UniProt
PMID:10601301, PMID:11414679 GO_REF:0000041, RGD:632758 NCBI chr 1:226,234,034...226,249,118
Ensembl chr 1:226,234,074...226,249,138
JBrowse link
G Fads2 fatty acid desaturase 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:225,906,582...226,152,568
Ensembl chr 1:226,114,413...226,152,524
JBrowse link
G Fads2b fatty acid desaturase 2B IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:72,855,767...72,895,734
Ensembl chr 3:72,854,475...72,895,740
JBrowse link
G Fads3 fatty acid desaturase 3 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:226,091,774...226,108,332
Ensembl chr 1:226,091,774...226,108,332
JBrowse link
G LOC102549542 elongation of very long chain fatty acids protein 6-like IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:234,375,172...234,486,639
Ensembl chr 2:234,375,315...234,483,149
JBrowse link
G LOC681458 similar to stearoyl-coenzyme A desaturase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:263,968,156...264,003,991
Ensembl chr 1:263,968,134...264,004,008
JBrowse link
G Scd stearoyl-CoA desaturase IDA
IBA
ISO
IMP
PMID:2892838
PMID:21873635
(PMID:15907797), (PMID:18765284)
PMID:7947684
RGD PMID:15907797, PMID:18765284, PMID:2892838, PMID:21873635, PMID:7947684 RGD:10054074, RGD:13792537, RGD:10054069 NCBI chr 1:264,159,966...264,173,061
Ensembl chr 1:264,160,129...264,172,729
JBrowse link
G Scd2 stearoyl-Coenzyme A desaturase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,059,374...264,072,433
Ensembl chr 1:264,059,374...264,072,433
JBrowse link
G Scd4 stearoyl-coenzyme A desaturase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,094,007...264,105,473
Ensembl chr 1:264,094,080...264,105,344
JBrowse link
very long-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 ISO
IBA
(PMID:20166112), (PMID:20937905)
PMID:21873635
RGD PMID:20166112, PMID:20937905, PMID:21873635 RGD:13792537 NCBI chr 5:137,255,868...137,260,486
Ensembl chr 5:137,255,908...137,260,483
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 ISO
IBA
(PMID:12371743), (PMID:20937905)
PMID:21873635
(MGI:4939101|PMID:21106902), (MGI:4943668|PMID:12371743)
RGD PMID:12371743, PMID:20937905, PMID:21106902, PMID:21873635 MGI:4939101, MGI:4943668, RGD:13792537 NCBI chr17:21,382,461...21,422,413
Ensembl chr17:21,382,455...21,422,407
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 ISO
IBA
(PMID:20937905)
PMID:21873635
(MGI:3033509|PMID:14581464)
RGD PMID:14581464, PMID:20937905, PMID:21873635 MGI:3033509, RGD:13792537 NCBI chr 1:265,883,353...265,887,181
Ensembl chr 1:265,883,355...265,887,226
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 ISO
IBA
(PMID:20937905)
PMID:21873635
RGD PMID:20937905, PMID:21873635 RGD:13792537 NCBI chr 8:91,310,690...91,338,625
Ensembl chr 8:91,310,630...91,338,843
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 IDA
IBA
ISO
PMID:12005057
PMID:21873635
(PMID:20427700), (PMID:20937905)
RGD PMID:20427700, PMID:20937905, PMID:12005057, PMID:21873635 RGD:8554529, RGD:13792537 NCBI chr 8:85,220,941...85,287,449
Ensembl chr 8:85,259,982...85,285,983
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:234,187,490...234,296,124
Ensembl chr 2:234,189,105...234,296,145
Ensembl chr 2:234,189,105...234,296,145
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 ISO
IBA
IEA
(PMID:19826053), (PMID:20937905)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:19826053, PMID:20937905, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:40,373,211...40,386,643
Ensembl chr 2:40,373,211...40,386,669
JBrowse link
G Fads2 fatty acid desaturase 2 TAS RGD PMID:11988075 RGD:70542 NCBI chr 1:225,906,582...226,152,568
Ensembl chr 1:226,114,413...226,152,524
JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 ISO
IBA
(PMID:18554506)
PMID:21873635
RGD PMID:18554506, PMID:21873635 RGD:13792537 NCBI chr17:81,173,238...81,196,012
Ensembl chr17:81,173,713...81,187,739
JBrowse link
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 ISO
IBA
(PMID:18554506)
PMID:21873635
RGD PMID:18554506, PMID:21873635 RGD:13792537 NCBI chr11:68,893,684...68,985,635
Ensembl chr11:68,894,445...68,989,988
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 ISO
IBA
(PMID:18554506)
PMID:21873635
RGD PMID:18554506, PMID:21873635 RGD:13792537 NCBI chr 8:70,471,572...70,509,874
Ensembl chr 8:70,471,572...70,509,874
JBrowse link
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 ISO
IBA
(PMID:18554506)
PMID:21873635
RGD PMID:18554506, PMID:21873635 RGD:13792537 NCBI chr 5:106,728,401...106,758,068
Ensembl chr 5:106,732,513...106,758,032
JBrowse link
G LOC102549542 elongation of very long chain fatty acids protein 6-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:234,375,172...234,486,639
Ensembl chr 2:234,375,315...234,483,149
JBrowse link
G Tecr trans-2,3-enoyl-CoA reductase ISS
ISO
IBA
GO_REF:0000024
(PMID:12482854), (PMID:24220030)
PMID:21873635
UniProt
RGD
PMID:12482854, PMID:24220030, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:24,705,478...24,732,024
Ensembl chr19:24,705,481...24,732,024
JBrowse link
G Tecrl trans-2,3-enoyl-CoA reductase-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:26,662,851...26,735,878
Ensembl chr14:26,662,965...26,737,657
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      small molecule metabolic process 1797
        organic acid metabolic process 1007
          organic acid biosynthetic process 297
            carboxylic acid biosynthetic process 289
              monocarboxylic acid biosynthetic process 200
                (R)-mandelate catabolic process to benzoate 0
                (R)-mevalonic acid biosynthetic process + 0
                2-dehydro-3-deoxy-D-gluconic acid biosynthetic process 0
                3,4-dihydroxybenzoate biosynthetic process 0
                3-(2,3-dihydroxyphenyl)propanoate biosynthetic process 0
                3-(3-hydroxyphenyl)propanoate biosynthetic process 0
                4-hydroxyphenylacetate biosynthetic process 0
                L-pipecolic acid biosynthetic process 0
                abscisic acid biosynthetic process + 0
                acetate biosynthetic process + 2
                aldonic acid biosynthetic process + 0
                bile acid biosynthetic process + 22
                biotin biosynthetic process 0
                cinnamic acid biosynthetic process 0
                clavulanic acid biosynthetic process 0
                coenzyme B biosynthetic process 0
                creatine biosynthetic process 2
                cyclic 2,3-bisphospho-D-glycerate biosynthetic process 0
                dethiobiotin biosynthetic process 0
                ectoine biosynthetic process 0
                fatty acid biosynthetic process + 156
                ferulate biosynthetic process 0
                formate biosynthetic process 0
                galacturonate biosynthetic process + 0
                gallate biosynthetic process 0
                glucuronate biosynthetic process + 0
                glycolate biosynthetic process + 1
                glycyrrhetinate biosynthetic process 0
                indoleacetic acid biosynthetic process + 0
                jasmonic acid biosynthetic process + 0
                kynurenic acid biosynthetic process 2
                lactate biosynthetic process + 5
                leukotriene A4 biosynthetic process 1
                leukotriene B4 biosynthetic process 0
                mandelate biosynthetic process 0
                methylgallate biosynthetic process 0
                nicotinate biosynthetic process 0
                o-orsellinic acid biosynthetic process + 0
                olivetolic acid biosynthetic process 0
                p-cumate biosynthetic process 0
                pantothenate biosynthetic process 0
                para-aminobenzoic acid biosynthetic process 0
                penicillin biosynthetic process + 0
                pentalenolactone biosynthetic process 0
                phaseic acid biosynthetic process 0
                picolinic acid biosynthetic process 0
                pyruvate biosynthetic process + 6
                quinate biosynthetic process 0
                retinoic acid biosynthetic process + 11
                salicylic acid biosynthetic process + 0
                sinapate biosynthetic process 0
Path 2
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      cellular metabolic process 10964
        organic acid metabolic process 1007
          oxoacid metabolic process 969
            carboxylic acid metabolic process 950
              monocarboxylic acid metabolic process 650
                monocarboxylic acid biosynthetic process 200
                  (R)-mandelate catabolic process to benzoate 0
                  (R)-mevalonic acid biosynthetic process + 0
                  2-dehydro-3-deoxy-D-gluconic acid biosynthetic process 0
                  3,4-dihydroxybenzoate biosynthetic process 0
                  3-(2,3-dihydroxyphenyl)propanoate biosynthetic process 0
                  3-(3-hydroxyphenyl)propanoate biosynthetic process 0
                  4-hydroxyphenylacetate biosynthetic process 0
                  L-pipecolic acid biosynthetic process 0
                  abscisic acid biosynthetic process + 0
                  acetate biosynthetic process + 2
                  aldonic acid biosynthetic process + 0
                  bile acid biosynthetic process + 22
                  biotin biosynthetic process 0
                  cinnamic acid biosynthetic process 0
                  clavulanic acid biosynthetic process 0
                  coenzyme B biosynthetic process 0
                  creatine biosynthetic process 2
                  cyclic 2,3-bisphospho-D-glycerate biosynthetic process 0
                  dethiobiotin biosynthetic process 0
                  ectoine biosynthetic process 0
                  fatty acid biosynthetic process + 156
                  ferulate biosynthetic process 0
                  formate biosynthetic process 0
                  galacturonate biosynthetic process + 0
                  gallate biosynthetic process 0
                  glucuronate biosynthetic process + 0
                  glycolate biosynthetic process + 1
                  glycyrrhetinate biosynthetic process 0
                  indoleacetic acid biosynthetic process + 0
                  jasmonic acid biosynthetic process + 0
                  kynurenic acid biosynthetic process 2
                  lactate biosynthetic process + 5
                  leukotriene A4 biosynthetic process 1
                  leukotriene B4 biosynthetic process 0
                  mandelate biosynthetic process 0
                  methylgallate biosynthetic process 0
                  nicotinate biosynthetic process 0
                  o-orsellinic acid biosynthetic process + 0
                  olivetolic acid biosynthetic process 0
                  p-cumate biosynthetic process 0
                  pantothenate biosynthetic process 0
                  para-aminobenzoic acid biosynthetic process 0
                  penicillin biosynthetic process + 0
                  pentalenolactone biosynthetic process 0
                  phaseic acid biosynthetic process 0
                  picolinic acid biosynthetic process 0
                  pyruvate biosynthetic process + 6
                  quinate biosynthetic process 0
                  retinoic acid biosynthetic process + 11
                  salicylic acid biosynthetic process + 0
                  sinapate biosynthetic process 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.