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ONTOLOGY REPORT - ANNOTATIONS


Term:monocarboxylic acid catabolic process
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Accession:GO:0072329 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.


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2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHYH phytanoyl-CoA 2-hydroxylase ISO RGD PMID:10588950 RGD:727286 NCBI chr 9:13,309,059...13,331,606
Ensembl chr 9:13,308,951...13,331,504
JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADS acyl-CoA dehydrogenase short chain involved_in ISO
IEA
RGD
TreeGrafter
PMID:3968063 GO_REF:0000118 RGD:2317678 NCBI chr11:116,083,156...116,096,554
Ensembl chr11:116,083,276...116,096,607
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT19 nudix hydrolase 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:27,744,236...27,766,000
Ensembl chr 6:27,745,339...27,765,881
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:63,212,163...63,231,465
Ensembl chr 5:63,212,226...63,231,650
JBrowse link
D-gluconate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDNK IDNK gluconokinase involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000118 NCBI chr12:94,426,017...94,448,050
Ensembl chr12:94,426,064...94,448,460
JBrowse link
G PGD phosphogluconate dehydrogenase involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr20:121,359,381...121,377,032 JBrowse link
D-glucuronate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1A1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15769935) Ensembl
MGI
PMID:15769935 GO_REF:0000107 NCBI chr20:87,228,348...87,245,511
Ensembl chr20:87,228,189...87,245,466
JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARSB arylsulfatase B involved_in ISO (PMID:24240681) MGI PMID:24240681 NCBI chr 4:73,016,497...73,203,570
Ensembl chr 4:73,015,980...73,202,439
JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:11,081,985...11,130,366
Ensembl chr26:11,082,468...11,116,075
JBrowse link
G HEXB hexosaminidase subunit beta involved_in ISO (PMID:11707436) MGI PMID:11707436 NCBI chr 4:69,037,532...69,065,925
Ensembl chr 4:69,037,583...69,065,814
JBrowse link
G IDUA alpha-L-iduronidase involved_in
acts_upstream_of_or_within
ISO (PMID:24036510)
(PMID:19834056)
(PMID:19751987)
(PMID:25854773)
UniProt
MGI
PMID:19751987 PMID:19834056 PMID:24036510 PMID:25854773 NCBI chr27:47,778,220...47,794,435
Ensembl chr27:47,778,335...47,794,352
JBrowse link
G LOC103232717 iduronate 2-sulfatase involved_in ISO (PMID:30064964) MGI PMID:30064964 NCBI chr  X:124,187,554...124,214,764
Ensembl chr  X:124,191,390...124,214,157
JBrowse link
fatty acid alpha-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HACL1 2-hydroxyacyl-CoA lyase 1 involved_in ISO PMID:10468558
(PMID:10468558), (PMID:15644336), (PMID:21708296), (PMID:28289220)
(MGI:6105330|PMID:28629946)
HGNC-UCL
UniProt
PMID:10468558 PMID:15644336 PMID:21708296 PMID:28289220 PMID:28629946 MGI:6105330 RGD:708588 NCBI chr15:60,360,380...60,433,528
Ensembl chr15:60,322,722...60,433,647
JBrowse link
G HAO1 hydroxyacid oxidase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 2:30,183,031...30,238,663
Ensembl chr 2:30,183,705...30,240,231
JBrowse link
G HAO2 hydroxyacid oxidase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:14,376,096...14,408,753
Ensembl chr20:14,374,543...14,407,992
JBrowse link
G ILVBL ilvB acetolactate synthase like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:13,717,252...13,728,880
Ensembl chr 6:13,715,767...13,728,855
JBrowse link
G PEX13 peroxisomal biogenesis factor 13 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12897163) Ensembl
MGI
PMID:12897163 GO_REF:0000107 NCBI chr14:45,939,181...45,973,049
Ensembl chr14:45,938,940...45,973,125
JBrowse link
G PHYH phytanoyl-CoA 2-hydroxylase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12915479), (PMID:9326939) RGD
MGI
InterPro
PMID:9326939 PMID:10588950 PMID:12915479 GO_REF:0000002 RGD:727286 NCBI chr 9:13,309,059...13,331,606
Ensembl chr 9:13,308,951...13,331,504
JBrowse link
G SLC27A2 solute carrier family 27 member 2 involved_in ISO (PMID:10198260) UniProt PMID:10198260 NCBI chr26:33,080,844...33,134,467
Ensembl chr26:33,083,317...33,134,433
JBrowse link
fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:128,152,697...128,171,007 JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in ISO (PMID:21145416)
(MGI:5315378|PMID:10196381)
UniProt PMID:10196381 PMID:21145416 MGI:5315378 NCBI chr11:35,818,451...35,884,696 JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr11:35,866,928...35,884,503 JBrowse link
G ABCD3 ATP binding cassette subfamily D member 3 involved_in ISO (PMID:9425230)
(PMID:24333844)
UniProt PMID:9425230 PMID:24333844 NCBI chr20:38,750,147...38,846,011
Ensembl chr20:38,748,787...38,845,989
JBrowse link
G ACAA1 acetyl-CoA acyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:1,282,556...1,297,154
Ensembl chr15:1,282,650...1,297,832
JBrowse link
G ACAA2 acetyl-CoA acyltransferase 2 ISO RGD PMID:11879205 RGD:2317624 NCBI chr18:31,152,067...31,181,020
Ensembl chr18:31,152,074...31,181,706
JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr20:57,428,863...57,468,422
Ensembl chr20:57,428,472...57,468,359
JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain ISO RGD PMID:8034667 RGD:631729 NCBI chr16:6,593,288...6,598,980
Ensembl chr16:6,593,287...6,598,979
JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:99,552,760...99,580,079
Ensembl chr 1:99,552,838...99,579,914
JBrowse link
G ACOX1 acyl-CoA oxidase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr16:45,706,009...45,745,564
Ensembl chr16:45,706,360...45,740,247
JBrowse link
G ACOX2 acyl-CoA oxidase 2 involved_in ISO
IEA
RGD
InterPro
PMID:1400324 PMID:8654595 GO_REF:0000002 RGD:2299949 RGD:2299971 NCBI chr22:19,805,736...19,838,399
Ensembl chr22:19,804,440...19,838,374
JBrowse link
G ACOXL acyl-CoA oxidase like involved_in IEA InterPro GO_REF:0000002 Ensembl chr14:13,812,041...14,173,333 JBrowse link
G ADIPOQ adiponectin, C1Q and collagen domain containing involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12151381) Ensembl
MGI
PMID:12151381 GO_REF:0000107 NCBI chr15:81,128,427...81,142,779
Ensembl chr15:81,129,795...81,147,391
JBrowse link
G ALDH1L2 aldehyde dehydrogenase 1 family member L2 acts_upstream_of_or_within_positive_effect ISO (MGI:6489626|PMID:33168096) UniProt PMID:33168096 MGI:6489626 NCBI chr11:100,242,649...100,311,164
Ensembl chr11:100,247,262...100,298,621
JBrowse link
G AUH AU RNA binding methylglutaconyl-CoA hydratase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:101,654,957...101,799,863
Ensembl chr12:101,653,386...101,799,792
JBrowse link
G BDH2 3-hydroxybutyrate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:51,185,303...51,206,300
Ensembl chr 7:51,183,107...51,206,261
JBrowse link
G CPT1A carnitine palmitoyltransferase 1A involved_in ISO
IEA
RGD
UniProt
PMID:31901136 PMID:31953200 GO_REF:0000041 RGD:25823178 RGD:25823179 NCBI chr 1:5,704,275...5,784,077
Ensembl chr 1:5,730,853...5,784,337
JBrowse link
G CPT1B carnitine palmitoyltransferase 1B involved_in IEA UniProt GO_REF:0000041 NCBI chr19:33,044,272...33,055,197
Ensembl chr19:33,043,916...33,054,247
JBrowse link
G CPT1C carnitine palmitoyltransferase 1C involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:42,865,706...42,885,359
Ensembl chr 6:42,866,921...42,885,185
JBrowse link
G CPT2 carnitine palmitoyltransferase 2 involved_in ISO
IEA
RGD
Ensembl
PMID:10380116 PMID:10796071 GO_REF:0000107 RGD:21410186 RGD:2326088 NCBI chr20:79,710,638...79,728,100
Ensembl chr20:79,706,584...79,727,689
JBrowse link
G CROT carnitine O-octanoyltransferase involved_in IEA UniProt
Ensembl
GO_REF:0000041 GO_REF:0000107 NCBI chr21:61,531,263...61,584,448
Ensembl chr21:61,531,060...61,584,447
JBrowse link
G DECR1 2,4-dienoyl-CoA reductase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:85,086,843...85,129,267
Ensembl chr 8:85,086,874...85,129,160
JBrowse link
G ECH1 enoyl-CoA hydratase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:33,439,490...33,449,349
Ensembl chr 6:33,439,682...33,449,272
JBrowse link
G ECHDC2 enoyl-CoA hydratase domain containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:80,017,665...80,043,810
Ensembl chr20:80,017,421...80,044,670
JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 involved_in ISO (PMID:26251176) RGD
UniProt
PMID:12379132 PMID:26251176 RGD:2317616 NCBI chr26:53,212,299...53,222,805 JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 Ensembl chr26:53,210,972...53,222,782 JBrowse link
G ECI1 enoyl-CoA delta isomerase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11916962) Ensembl
MGI
PMID:11916962 GO_REF:0000107 NCBI chr 5:2,135,042...2,147,246
Ensembl chr 5:2,135,129...2,147,109
JBrowse link
G ECI2 enoyl-CoA delta isomerase 2 ISO RGD PMID:11781327 RGD:2306199 NCBI chr17:68,034,906...68,054,825
Ensembl chr17:68,034,939...68,054,657
JBrowse link
G EHHADH enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17442273) Ensembl
MGI
UniProt
PMID:17442273 GO_REF:0000041 GO_REF:0000107 GO_REF:0000117 NCBI chr15:4,164,795...4,228,593
Ensembl chr15:4,164,838...4,228,651
JBrowse link
G HADH hydroxyacyl-CoA dehydrogenase involved_in ISO
IEA
RGD
Ensembl
PMID:17491019 GO_REF:0000107 RGD:2302227 NCBI chr 7:55,919,499...55,965,074
Ensembl chr 7:55,919,623...55,964,857
JBrowse link
G HADHA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11390422) RGD
MGI
UniProt
Ensembl
InterPro
PMID:1730633 PMID:11390422 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 GO_REF:0000117 RGD:1600572 NCBI chr14:81,411,620...81,468,415
Ensembl chr14:81,411,648...81,472,257
JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:1730633 GO_REF:0000107 GO_REF:0000118 RGD:1600572 NCBI chr14:81,361,735...81,411,588
Ensembl chr14:81,361,612...81,411,432
JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in ISO (PMID:12917011) UniProt PMID:12917011 NCBI chr  X:49,568,206...49,571,356
Ensembl chr  X:49,567,267...49,571,292
JBrowse link
G HSD17B4 hydroxysteroid 17-beta dehydrogenase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17442273) UniProt
MGI
Ensembl
PMID:17442273 GO_REF:0000041 GO_REF:0000107 NCBI chr23:22,674,059...22,761,270
Ensembl chr23:22,674,072...22,762,056
JBrowse link
G LEP leptin acts_upstream_of_or_within ISO (PMID:22958918) MGI PMID:22958918 NCBI chr21:97,056,913...97,071,161
Ensembl chr21:97,057,529...97,071,220
JBrowse link
G MTLN mitoregulin involved_in ISO (PMID:32243843) UniProt PMID:32243843 NCBI chr14:13,595,687...13,596,974 JBrowse link
G PEX2 peroxisomal biogenesis factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:72,513,975...72,532,399
Ensembl chr 8:72,514,307...72,517,003
JBrowse link
G PEX5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO (PMID:17442273)
(PMID:9288097)
MGI PMID:9288097 PMID:17442273 NCBI chr11:7,255,078...7,286,500
Ensembl chr11:7,256,182...7,274,938
JBrowse link
G PEX7 peroxisomal biogenesis factor 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12915479) Ensembl
MGI
PMID:12915479 GO_REF:0000107 NCBI chr13:36,486,636...36,585,662
Ensembl chr13:36,485,513...36,585,736
JBrowse link
G PPARD peroxisome proliferator activated receptor delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:36,695,546...36,779,554
Ensembl chr17:36,695,494...36,779,577
JBrowse link
G SCP2 sterol carrier protein 2 involved_in ISO PMID:9325339 UniProt PMID:9325339 RGD:21201257 NCBI chr20:79,868,825...79,993,906
Ensembl chr20:79,865,332...79,993,835
JBrowse link
G SESN2 sestrin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22958918) Ensembl
MGI
PMID:22958918 GO_REF:0000107 NCBI chr20:104,521,131...104,544,161
Ensembl chr20:104,521,132...104,544,001
JBrowse link
G SLC25A17 solute carrier family 25 member 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:23,323,925...23,368,368 JBrowse link
G SLC27A2 solute carrier family 27 member 2 involved_in ISO (PMID:10198260) UniProt PMID:10198260 NCBI chr26:33,080,844...33,134,467
Ensembl chr26:33,083,317...33,134,433
JBrowse link
fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAD11 acyl-CoA dehydrogenase family member 11 involved_in ISO (PMID:21237683) UniProt PMID:21237683 NCBI chr15:57,632,139...57,706,468
Ensembl chr15:57,626,742...57,707,504
JBrowse link
G ACADL acyl-CoA dehydrogenase long chain involved_in ISO (MGI:3526480|PMID:15639194) RGD
BHF-UCL
PMID:3968063 PMID:15639194 MGI:3526480 RGD:2317678 NCBI chr10:95,886,502...95,925,928
Ensembl chr10:95,887,465...95,925,578
JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain involved_in ISO
IEA
RGD
Ensembl
PMID:3968063 GO_REF:0000107 RGD:2317678 NCBI chr20:57,428,863...57,468,422
Ensembl chr20:57,428,472...57,468,359
JBrowse link
G ACADS acyl-CoA dehydrogenase short chain involved_in ISO
IEA
RGD
TreeGrafter
PMID:3968063 GO_REF:0000118 RGD:2317678 NCBI chr11:116,083,156...116,096,554
Ensembl chr11:116,083,276...116,096,607
JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain involved_in ISO (PMID:9599005)
(PMID:7668252)
(MGI:3526480|PMID:15639194)
UniProt
BHF-UCL
PMID:7668252 PMID:9599005 PMID:15639194 MGI:3526480 NCBI chr16:6,593,288...6,598,980
Ensembl chr16:6,593,287...6,598,979
JBrowse link
G ETFA electron transfer flavoprotein subunit alpha involved_in ISO (PMID:25416781) UniProt PMID:25416781 NCBI chr26:6,970,593...7,075,077
Ensembl chr26:6,970,584...7,076,049
JBrowse link
G ETFB electron transfer flavoprotein subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:44,269,123...44,286,039
Ensembl chr 6:44,267,702...44,286,065
JBrowse link
G ETFDH electron transfer flavoprotein dehydrogenase involved_in ISO (PMID:17412732) BHF-UCL PMID:17412732 NCBI chr 7:105,214,231...105,252,100
Ensembl chr 7:105,213,653...105,254,502
JBrowse link
G GCDH glutaryl-CoA dehydrogenase involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:11,572,512...11,588,108
Ensembl chr 6:11,572,540...11,588,224
JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in ISO (PMID:3597357) BHF-UCL PMID:3597357 NCBI chr26:42,592,387...42,605,931
Ensembl chr26:42,589,709...42,606,199
JBrowse link
fatty acid beta-oxidation using acyl-CoA oxidase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOX1 acyl-CoA oxidase 1 involved_in ISO
IEA
RGD
InterPro
Ensembl
PMID:1400324 GO_REF:0000002 GO_REF:0000107 RGD:2299949 NCBI chr16:45,706,009...45,745,564
Ensembl chr16:45,706,360...45,740,247
JBrowse link
G ACOX2 acyl-CoA oxidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:19,805,736...19,838,399
Ensembl chr22:19,804,440...19,838,374
JBrowse link
G ACOX3 acyl-CoA oxidase 3, pristanoyl ISO RGD PMID:1400324 PMID:8026493 PMID:8654595 RGD:2299949 RGD:2299969 RGD:2299971 NCBI chr27:44,313,297...44,366,702 JBrowse link
G CRAT carnitine O-acetyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:9,057,365...9,072,692
Ensembl chr12:9,058,824...9,072,813
JBrowse link
fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADL acyl-CoA dehydrogenase long chain acts_upstream_of_or_within ISO (PMID:21151927) MGI PMID:21151927 NCBI chr10:95,886,502...95,925,928
Ensembl chr10:95,887,465...95,925,578
JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain acts_upstream_of_or_within ISO (PMID:21151927) MGI PMID:21151927 NCBI chr16:6,593,288...6,598,980
Ensembl chr16:6,593,287...6,598,979
JBrowse link
G ACOT7 acyl-CoA thioesterase 7 acts_upstream_of_or_within ISO (PMID:11834298) MGI PMID:11834298 NCBI chr20:125,345,636...125,474,650
Ensembl chr20:125,345,670...125,474,690
JBrowse link
G ACOX1 acyl-CoA oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:45,706,009...45,745,564
Ensembl chr16:45,706,360...45,740,247
JBrowse link
G DECR2 2,4-dienoyl-CoA reductase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:342,006...357,369
Ensembl chr 5:342,038...357,392
JBrowse link
G ECI2 enoyl-CoA delta isomerase 2 involved_in ISO (PMID:10419495) UniProt PMID:10419495 NCBI chr17:68,034,906...68,054,825
Ensembl chr17:68,034,939...68,054,657
JBrowse link
G LEP leptin ISO RGD PMID:12058043 RGD:625499 NCBI chr21:97,056,913...97,071,161
Ensembl chr21:97,057,529...97,071,220
JBrowse link
G LOC103224888 fatty-acid amide hydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:86,392,539...86,413,024
Ensembl chr20:86,391,264...86,412,982
JBrowse link
G LPIN1 lipin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:95,777,976...95,926,420
Ensembl chr14:95,780,478...95,926,419
JBrowse link
G LPIN2 lipin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:62,152,837...62,265,992
Ensembl chr18:62,177,246...62,236,593
JBrowse link
glucuronate catabolic process to xylulose 5-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1A1 aldo-keto reductase family 1 member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:87,228,348...87,245,511
Ensembl chr20:87,228,189...87,245,466
JBrowse link
G CRYL1 crystallin lambda 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:567,937...704,109
Ensembl chr 3:567,931...688,388
JBrowse link
G DCXR dicarbonyl and L-xylulose reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:73,923,170...73,925,025
Ensembl chr16:73,919,463...73,925,277
JBrowse link
G LOC103221304 sorbitol dehydrogenase-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:22,411,218...22,413,251 JBrowse link
G SORD sorbitol dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:38,129,236...38,173,867
Ensembl chr26:38,126,911...38,155,381
JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAO1 hydroxyacid oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:30,183,031...30,238,663
Ensembl chr 2:30,183,705...30,240,231
JBrowse link
glyoxylate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:126,933,711...126,943,980
Ensembl chr10:126,933,835...126,944,354
JBrowse link
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 4:33,889,615...33,933,500
Ensembl chr 4:33,888,533...33,933,449
JBrowse link
G HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:90,745,969...90,772,953
Ensembl chr 9:90,746,373...90,773,932
JBrowse link
lactate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDHD lactate dehydrogenase D involved_in ISO (PMID:30931947) UniProt PMID:30931947 NCBI chr 5:60,593,830...60,598,972
Ensembl chr 5:60,594,328...60,599,203
JBrowse link
leukotriene B4 catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP4F3 cytochrome P450 family 4 subfamily F member 3 involved_in ISO (PMID:11461919), (PMID:9675028) UniProt PMID:9675028 PMID:11461919 NCBI chr 6:14,241,352...14,260,799
Ensembl chr 6:14,241,409...14,263,494
JBrowse link
long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:23671276)
(PMID:18757502)
UniProt PMID:18757502 PMID:23671276 NCBI chr  X:128,152,697...128,171,007 JBrowse link
G ACADL acyl-CoA dehydrogenase long chain involved_in ISO
IEA
RGD
InterPro
PMID:3968063 GO_REF:0000002 RGD:2317678 NCBI chr10:95,886,502...95,925,928
Ensembl chr10:95,887,465...95,925,578
JBrowse link
G ADTRP androgen dependent TFPI regulating protein involved_in ISO (PMID:27018888) UniProt PMID:27018888 NCBI chr17:60,371,412...60,436,988
Ensembl chr17:60,368,546...60,438,864
JBrowse link
G AIG1 androgen induced 1 involved_in ISO (PMID:27018888) UniProt PMID:27018888 NCBI chr13:29,903,099...30,180,050
Ensembl chr13:30,078,019...30,180,012
JBrowse link
G LIPE lipase E, hormone sensitive type acts_upstream_of_or_within ISO (PMID:16804080) MGI PMID:16804080 NCBI chr 6:36,604,822...36,630,648
Ensembl chr 6:36,605,126...36,630,376
JBrowse link
medium-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:7,631,436...7,742,209
Ensembl chr29:7,631,412...7,740,394
JBrowse link
G ABHD3 abhydrolase domain containing 3, phospholipase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:58,795,497...58,842,714
Ensembl chr18:58,795,865...58,842,824
JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain involved_in ISO
IEA
RGD
Ensembl
PMID:3968063 GO_REF:0000107 RGD:2317678 NCBI chr20:57,428,863...57,468,422
Ensembl chr20:57,428,472...57,468,359
JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACACB acetyl-CoA carboxylase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:104,325,250...104,488,567
Ensembl chr11:104,349,573...104,488,003
JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chr24:82,704,087...82,730,711
Ensembl chr24:82,704,068...82,727,698
JBrowse link
G CNR1 cannabinoid receptor 1 ISO RGD PMID:19724020 RGD:2314644 NCBI chr13:12,626,259...12,653,253
Ensembl chr13:12,630,270...12,631,688
JBrowse link
G DBI diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:11485163 RGD:2316274 NCBI chr10:10,956,529...10,962,135 JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5474727|PMID:23209793) ARUK-UCL
Ensembl
PMID:23209793 GO_REF:0000107 MGI:5474727 NCBI chr20:92,926,217...92,941,191
Ensembl chr20:92,926,067...92,941,159
JBrowse link
G PINK1 PTEN induced kinase 1 ISO RGD PMID:25421206 RGD:11560775 NCBI chr20:111,902,135...111,919,082
Ensembl chr20:111,902,765...111,919,069
JBrowse link
G PLIN5 perilipin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,251,316...4,262,656
Ensembl chr 6:4,251,751...4,261,126
JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ETFBKMT electron transfer flavoprotein subunit beta lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:31,122,358...31,147,473
Ensembl chr11:31,134,559...31,147,174
JBrowse link
phenylacetate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PON3 paraoxonase 3 ISO RGD PMID:12946270 RGD:1303961 NCBI chr21:53,645,406...53,675,066
Ensembl chr21:53,645,384...53,674,812
JBrowse link
positive regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in ISO (MGI:3835692|PMID:18854420), (MGI:3836690|PMID:18723473), (MGI:6189665|PMID:23123468)
(PMID:23123468)
UniProt PMID:18723473 PMID:18854420 PMID:23123468 MGI:3835692 MGI:3836690 MGI:6189665 NCBI chr  X:128,152,697...128,171,007 JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in ISO (PMID:10196381)
(MGI:3835692|PMID:18854420), (MGI:3836690|PMID:18723473)
UniProt PMID:10196381 PMID:18723473 PMID:18854420 MGI:3835692 MGI:3836690 NCBI chr11:35,818,451...35,884,696 JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr11:35,866,928...35,884,503 JBrowse link
G ACSL5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:14711823 RGD:2312802 NCBI chr 9:105,259,546...105,311,500
Ensembl chr 9:105,257,429...105,311,690
JBrowse link
G AKT2 AKT serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:34,688,585...34,740,458
Ensembl chr 6:34,690,462...34,720,781
JBrowse link
G CPT1A carnitine palmitoyltransferase 1A ISO RGD PMID:19302064 RGD:2311346 NCBI chr 1:5,704,275...5,784,077
Ensembl chr 1:5,730,853...5,784,337
JBrowse link
G FABP1 fatty acid binding protein 1 ISO peroxisomal RGD PMID:16262600 RGD:1626442 NCBI chr14:18,660,058...18,666,730
Ensembl chr14:18,659,836...18,667,127
JBrowse link
G IRS1 insulin receptor substrate 1 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chr10:112,748,283...112,812,368 JBrowse link
G IRS2 insulin receptor substrate 2 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chr 3:88,045,439...88,076,468 JBrowse link
G MTLN mitoregulin involved_in ISO (MGI:6278482|PMID:29949755) UniProt PMID:29949755 MGI:6278482 NCBI chr14:13,595,687...13,596,974 JBrowse link
G PLIN5 perilipin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,251,316...4,262,656
Ensembl chr 6:4,251,751...4,261,126
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:39,040,178...39,042,384
Ensembl chr21:39,040,547...39,041,146
JBrowse link
propionate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:1,077,206...1,087,306
Ensembl chr24:1,077,447...1,087,607
JBrowse link
pyruvate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDHA lactate dehydrogenase A involved_in ISO (PMID:8224816)
(PMID:21041631)
MGI PMID:8224816 PMID:21041631 NCBI chr 1:46,525,090...46,542,587 JBrowse link
G LDHC lactate dehydrogenase C involved_in ISO (PMID:21565994) MGI PMID:21565994 NCBI chr 1:46,480,425...46,528,307 JBrowse link
G SLC16A1 solute carrier family 16 member 1 involved_in ISO (PMID:29026134) MGI PMID:29026134 NCBI chr20:20,694,222...20,741,542
Ensembl chr20:20,727,199...20,739,979
JBrowse link
G SLC16A3 solute carrier family 16 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:74,146,799...74,157,626
Ensembl chr16:74,150,110...74,158,112
JBrowse link
regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB11 ATP binding cassette subfamily B member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:54,458,283...54,575,943
Ensembl chr10:54,459,377...54,575,059
JBrowse link
G ABCD1 ATP binding cassette subfamily D member 1 involved_in ISO (MGI:1095802|PMID:9256488), (MGI:1101351|PMID:9418970), (MGI:5635749|PMID:25255441), (MGI:87573|PMID:9126326) UniProt PMID:9126326 PMID:9256488 PMID:9418970 PMID:25255441 MGI:1095802 MGI:1101351 MGI:5635749 MGI:87573 NCBI chr  X:128,152,697...128,171,007 JBrowse link
G LONP2 lon peptidase 2, peroxisomal involved_in ISO (PMID:22002062) UniProt PMID:22002062 NCBI chr 5:34,050,284...34,160,363
Ensembl chr 5:34,050,446...34,160,165
JBrowse link
G MLYCD malonyl-CoA decarboxylase ISO RGD PMID:10516138 RGD:1600797 NCBI chr 5:69,312,978...69,329,346
Ensembl chr 5:69,313,062...69,329,102
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chr20:120,522,667...120,678,988
Ensembl chr20:120,525,737...120,679,020
JBrowse link
G TYSND1 trypsin like peroxisomal matrix peptidase 1 involved_in ISO (PMID:22002062) UniProt PMID:22002062 NCBI chr 9:61,159,105...61,169,122
Ensembl chr 9:61,159,974...61,169,193
JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 involved_in ISO (PMID:10823918) RGD
BHF-UCL
PMID:10823918 PMID:21138835 RGD:6771354 NCBI chr14:35,030,011...35,057,164
Ensembl chr14:35,038,654...35,057,176
JBrowse link
G CYP2W1 cytochrome P450 family 2 subfamily W member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:20,580,272...20,592,771
Ensembl chr28:20,582,287...20,591,497
JBrowse link
G LOC103216270 cytochrome P450 26A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:86,310,142...86,328,622
Ensembl chr 9:86,325,401...86,328,775
JBrowse link
G LOC119618102 cytochrome P450 26C1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 9:86,311,950...86,319,834 JBrowse link
short-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103233018 liver carboxylesterase 1 acts_upstream_of_or_within ISO (PMID:16804080) MGI PMID:16804080 NCBI chr 5:41,710,500...41,745,483 JBrowse link
very long-chain fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOX1 acyl-CoA oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:45,706,009...45,745,564
Ensembl chr16:45,706,360...45,740,247
JBrowse link
very long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:128,152,697...128,171,007 JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in ISO (MGI:3836690|PMID:18723473)
PMID:25043761
(PMID:21145416)
UniProt PMID:18723473 PMID:21145416 PMID:25043761 MGI:3836690 RGD:13673760 NCBI chr11:35,818,451...35,884,696 JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr11:35,866,928...35,884,503 JBrowse link
G ABCD3 ATP binding cassette subfamily D member 3 involved_in ISO (PMID:9425230) UniProt PMID:9425230 NCBI chr20:38,750,147...38,846,011
Ensembl chr20:38,748,787...38,845,989
JBrowse link
G SLC27A2 solute carrier family 27 member 2 acts_upstream_of_or_within ISO (PMID:12719378) MGI PMID:12719378 NCBI chr26:33,080,844...33,134,467
Ensembl chr26:33,083,317...33,134,433
JBrowse link
G SLC27A4 solute carrier family 27 member 4 acts_upstream_of_or_within ISO (PMID:17522045) MGI PMID:17522045 NCBI chr12:9,769,242...9,788,214 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16523
    metabolic process 10278
      catabolic process 2409
        cellular catabolic process 998
          organic acid catabolic process 224
            carboxylic acid catabolic process 224
              monocarboxylic acid catabolic process 120
                (R)-4-hydroxymandelate catabolic process 0
                (R)-mevalonic acid catabolic process 0
                1,6-anhydro-N-acetyl-beta-muramic acid catabolic process 0
                2,4,5-trichlorophenoxyacetic acid catabolic process 0
                2,4-dichlorobenzoate catabolic process 0
                2,4-dichlorophenoxyacetic acid catabolic process 0
                2-dehydro-3-deoxy-D-gluconic acid catabolic process 0
                3,4-dihydroxybenzoate catabolic process + 0
                3-(2,3-dihydroxyphenyl)propanoate catabolic process 0
                3-(3-hydroxy)phenylpropionate catabolic process 0
                3-(3-hydroxyphenyl)propanoate catabolic process 0
                3-hydroxyphenylacetate catabolic process 0
                3-phenylpropionate catabolic process 0
                4-hydroxyphenylacetate catabolic process 0
                4-toluenecarboxylate catabolic process 0
                abscisic acid catabolic process 0
                acetate catabolic process + 0
                aldonic acid catabolic process + 2
                anthranilate catabolic process 0
                benzoate catabolic process + 0
                bile acid catabolic process 0
                biotin catabolic process 0
                cinnamic acid catabolic process 0
                dermatan sulfate catabolic process 5
                ectoine catabolic process 0
                fatty acid catabolic process + 95
                ferulate catabolic process + 0
                formate catabolic process 0
                fumagillin catabolic process 0
                galacturonate catabolic process + 0
                gallate catabolic process + 0
                glucuronate catabolic process + 5
                glycolate catabolic process 1
                glycyrrhetinate catabolic process 0
                glyoxylate catabolic process 3
                homogentisate catabolic process 0
                indoleacetic acid catabolic process 0
                lactate catabolic process + 1
                mandelate catabolic process + 0
                methylgallate catabolic process 0
                nicotinate catabolic process 0
                o-orsellinic acid catabolic process 0
                ochratoxin A catabolic process 0
                p-cumate catabolic process 0
                pantothenate catabolic process 0
                penicillin catabolic process + 0
                pentalenolactone catabolic process 0
                phenylacetate catabolic process 1
                pyruvate catabolic process + 4
                quinate catabolic process 0
                retinoic acid catabolic process 4
                salicylic acid catabolic process 0
                shikimate catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 16523
    cellular process 15422
      cellular metabolic process 8506
        organic acid metabolic process 862
          oxoacid metabolic process 856
            carboxylic acid metabolic process 840
              carboxylic acid catabolic process 224
                monocarboxylic acid catabolic process 120
                  (R)-4-hydroxymandelate catabolic process 0
                  (R)-mevalonic acid catabolic process 0
                  1,6-anhydro-N-acetyl-beta-muramic acid catabolic process 0
                  2,4,5-trichlorophenoxyacetic acid catabolic process 0
                  2,4-dichlorobenzoate catabolic process 0
                  2,4-dichlorophenoxyacetic acid catabolic process 0
                  2-dehydro-3-deoxy-D-gluconic acid catabolic process 0
                  3,4-dihydroxybenzoate catabolic process + 0
                  3-(2,3-dihydroxyphenyl)propanoate catabolic process 0
                  3-(3-hydroxy)phenylpropionate catabolic process 0
                  3-(3-hydroxyphenyl)propanoate catabolic process 0
                  3-hydroxyphenylacetate catabolic process 0
                  3-phenylpropionate catabolic process 0
                  4-hydroxyphenylacetate catabolic process 0
                  4-toluenecarboxylate catabolic process 0
                  abscisic acid catabolic process 0
                  acetate catabolic process + 0
                  aldonic acid catabolic process + 2
                  anthranilate catabolic process 0
                  benzoate catabolic process + 0
                  bile acid catabolic process 0
                  biotin catabolic process 0
                  cinnamic acid catabolic process 0
                  dermatan sulfate catabolic process 5
                  ectoine catabolic process 0
                  fatty acid catabolic process + 95
                  ferulate catabolic process + 0
                  formate catabolic process 0
                  fumagillin catabolic process 0
                  galacturonate catabolic process + 0
                  gallate catabolic process + 0
                  glucuronate catabolic process + 5
                  glycolate catabolic process 1
                  glycyrrhetinate catabolic process 0
                  glyoxylate catabolic process 3
                  homogentisate catabolic process 0
                  indoleacetic acid catabolic process 0
                  lactate catabolic process + 1
                  mandelate catabolic process + 0
                  methylgallate catabolic process 0
                  nicotinate catabolic process 0
                  o-orsellinic acid catabolic process 0
                  ochratoxin A catabolic process 0
                  p-cumate catabolic process 0
                  pantothenate catabolic process 0
                  penicillin catabolic process + 0
                  pentalenolactone catabolic process 0
                  phenylacetate catabolic process 1
                  pyruvate catabolic process + 4
                  quinate catabolic process 0
                  retinoic acid catabolic process 4
                  salicylic acid catabolic process 0
                  shikimate catabolic process 0
paths to the root