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ONTOLOGY REPORT - ANNOTATIONS


Term:monocarboxylic acid catabolic process
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Accession:GO:0072329 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.



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2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC478000 phytanoyl-CoA hydroxylase-like ISO RGD PMID:10588950 RGD:727286 NCBI chr 2:23,185,901...23,206,719
Ensembl chr 2:23,185,782...23,253,497
JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADS acyl-CoA dehydrogenase short chain ISO RGD PMID:3968063 RGD:2317678 NCBI chr26:16,572,936...16,584,760
Ensembl chr26:16,572,947...16,584,194
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT19 nudix hydrolase 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:119,305,855...119,311,875 JBrowse link
G NUDT7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,515,819...73,527,780
Ensembl chr 5:73,516,166...73,527,716
JBrowse link
G NUDT8 nudix hydrolase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:49,874,630...49,876,703 JBrowse link
D-gluconate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDNK IDNK gluconokinase involved_in IEA TreeGrafter
UniProt
GO_REF:0000041 GO_REF:0000118 NCBI chr 1:75,822,380...75,836,880
Ensembl chr 1:75,823,528...75,837,169
JBrowse link
D-glucuronate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1A1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within
ISO PMID:22820017
(PMID:15769935)
UniProt
MGI
PMID:15769935 PMID:22820017 RGD:13825440 NCBI chr15:14,792,398...14,808,805
Ensembl chr15:14,742,012...14,808,592
JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARSB arylsulfatase B involved_in ISO (PMID:24240681) MGI PMID:24240681 NCBI chr 3:27,870,111...28,034,906
Ensembl chr 3:27,870,151...28,034,906
JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:35,836,788...35,862,525 JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:57,221,809...57,248,432
Ensembl chr 2:57,222,186...57,248,417
JBrowse link
G IDS iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:117,490,749...117,515,566
Ensembl chr  X:117,491,548...117,515,496
JBrowse link
G IDUA alpha-L-iduronidase involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(PMID:19834056)
(PMID:19751987)
UniProt
MGI
Ensembl
PMID:19751987 PMID:19834056 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:91,517,225...91,534,593
Ensembl chr 3:91,522,035...91,534,593
JBrowse link
fatty acid alpha-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAO1 hydroxyacid oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:14,204,543...14,252,873
Ensembl chr24:14,204,617...14,252,191
JBrowse link
G ILVBL ilvB acetolactate synthase like involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:47,013,033...47,021,511
Ensembl chr20:47,012,557...47,021,778
JBrowse link
G LOC119876062 phytanoyl-CoA dioxygenase, peroxisomal-like involved_in IEA InterPro GO_REF:0000002
G LOC119876063 phytanoyl-CoA dioxygenase, peroxisomal-like involved_in IEA InterPro GO_REF:0000002
G LOC119876065 phytanoyl-CoA dioxygenase, peroxisomal-like involved_in IEA InterPro GO_REF:0000002
G LOC119878397 phytanoyl-CoA dioxygenase, peroxisomal-like involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107
G LOC119878398 phytanoyl-CoA dioxygenase, peroxisomal-like involved_in IEA InterPro GO_REF:0000002
G LOC119878493 phytanoyl-CoA dioxygenase, peroxisomal-like involved_in IEA InterPro GO_REF:0000002
G LOC119878928 phytanoyl-CoA dioxygenase, peroxisomal-like involved_in IEA InterPro GO_REF:0000002
G LOC478000 phytanoyl-CoA hydroxylase-like involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:12915479), (PMID:9326939) RGD
InterPro
MGI
PMID:9326939 PMID:10588950 PMID:12915479 GO_REF:0000002 RGD:727286 NCBI chr 2:23,185,901...23,206,719
Ensembl chr 2:23,185,782...23,253,497
JBrowse link
G LOC478001 phytanoyl-CoA hydroxylase-like involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:23,235,467...23,253,497 JBrowse link
G LOC608697 2-hydroxyacyl-CoA lyase 1 involved_in ISO (MGI:6105330|PMID:28629946)
PMID:10468558
(PMID:10468558), (PMID:15644336), (PMID:21708296), (PMID:28289220)
UniProt
HGNC-UCL
PMID:10468558 PMID:15644336 PMID:21708296 PMID:28289220 PMID:28629946 MGI:6105330 RGD:708588 NCBI chr23:27,069,676...27,188,247 JBrowse link
G PEX13 peroxisomal biogenesis factor 13 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12897163) Ensembl
MGI
PMID:12897163 GO_REF:0000107 NCBI chr10:61,113,213...61,130,157
Ensembl chr10:61,123,655...61,193,241
JBrowse link
G SLC27A2 solute carrier family 27 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:16,155,932...16,196,919
Ensembl chr30:16,156,063...16,196,829
JBrowse link
fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr  X:121,545,690...121,564,117
Ensembl chr  X:121,545,586...121,563,186
JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:14,015,093...14,084,362
Ensembl chr27:14,015,091...14,163,312
JBrowse link
G ABCD3 ATP binding cassette subfamily D member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,740,704...54,816,854
Ensembl chr 6:54,742,111...54,817,235
JBrowse link
G ACAA1 acetyl-CoA acyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:7,889,481...7,901,324
Ensembl chr23:7,889,500...7,901,229
JBrowse link
G ACAA2 acetyl-CoA acyltransferase 2 ISO RGD PMID:11879205 RGD:2317624 NCBI chr 7:79,028,636...79,057,720 JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 6:70,852,223...70,881,979
Ensembl chr 6:70,853,061...70,878,668
JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain ISO RGD PMID:8034667 RGD:631729 NCBI chr 5:32,189,191...32,194,255
Ensembl chr 5:32,186,502...32,327,990
JBrowse link
G ACOX1 acyl-CoA oxidase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:4,658,692...4,682,667
Ensembl chr 9:4,658,090...4,679,096
JBrowse link
G ACOX2 acyl-CoA oxidase 2 involved_in ISO
IEA
RGD
InterPro
PMID:1400324 PMID:8654595 GO_REF:0000002 RGD:2299949 RGD:2299971 NCBI chr20:32,110,788...32,141,751
Ensembl chr20:32,113,217...32,141,734
JBrowse link
G ACOX3 acyl-CoA oxidase 3, pristanoyl involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:60,154,012...60,205,696
Ensembl chr 3:60,153,775...60,203,554
JBrowse link
G ACOXL acyl-CoA oxidase like involved_in IEA InterPro GO_REF:0000002 NCBI chr17:35,269,824...35,617,068
Ensembl chr17:35,269,501...35,617,335
JBrowse link
G ADIPOQ adiponectin, C1Q and collagen domain containing involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
(PMID:12151381) Ensembl
MGI
UniProt
PMID:12151381 GO_REF:0000024 GO_REF:0000107 NCBI chr34:19,398,310...19,410,519
Ensembl chr34:19,354,825...19,409,844
JBrowse link
G ALDH1L2 aldehyde dehydrogenase 1 family member L2 acts_upstream_of_or_within_positive_effect
involved_in
ISO
IEA
(MGI:6489626|PMID:33168096) UniProt
Ensembl
PMID:33168096 GO_REF:0000107 MGI:6489626 NCBI chr10:33,310,523...33,365,677
Ensembl chr10:33,310,558...33,365,228
JBrowse link
G BDH2 3-hydroxybutyrate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:24,420,946...24,442,384
Ensembl chr32:24,420,951...24,442,384
JBrowse link
G CPT1A carnitine palmitoyltransferase 1A involved_in ISO
IEA
RGD
UniProt
PMID:31901136 PMID:31953200 GO_REF:0000041 RGD:25823178 RGD:25823179 NCBI chr18:49,136,691...49,190,117
Ensembl chr18:49,136,691...49,190,117
JBrowse link
G CPT1B carnitine palmitoyltransferase 1B involved_in IEA UniProt GO_REF:0000041 NCBI chr10:16,737,106...16,744,626
Ensembl chr10:16,737,289...16,744,624
JBrowse link
G CPT1C carnitine palmitoyltransferase 1C involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:106,826,207...106,847,117
Ensembl chr 1:106,826,303...106,846,446
JBrowse link
G CPT2 carnitine palmitoyltransferase 2 involved_in IEA
ISO
UniProt
Ensembl
RGD
PMID:10380116 PMID:10796071 GO_REF:0000041 GO_REF:0000107 RGD:21410186 RGD:2326088 NCBI chr 5:55,718,209...55,786,175
Ensembl chr 5:55,718,510...55,744,809
JBrowse link
G CROT carnitine O-octanoyltransferase involved_in IEA UniProt
Ensembl
GO_REF:0000041 GO_REF:0000107 NCBI chr14:13,475,130...13,532,536
Ensembl chr14:13,475,235...13,532,536
JBrowse link
G DECR1 2,4-dienoyl-CoA reductase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,495,348...35,544,955
Ensembl chr29:35,495,261...35,544,955
JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 involved_in ISO (PMID:26251176) UniProt
RGD
PMID:12379132 PMID:26251176 RGD:2317616 NCBI chr28:40,939,856...40,947,694
Ensembl chr28:40,939,961...40,946,167
JBrowse link
G ECI1 enoyl-CoA delta isomerase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11916962) MGI
Ensembl
PMID:11916962 GO_REF:0000107 NCBI chr 6:38,729,729...38,738,357
Ensembl chr 6:38,730,219...38,738,219
JBrowse link
G ECI2 enoyl-CoA delta isomerase 2 ISO RGD PMID:11781327 RGD:2306199 NCBI chr35:4,349,075...4,368,219
Ensembl chr35:4,342,214...4,366,331
JBrowse link
G EHHADH enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17442273) MGI
UniProt
Ensembl
PMID:17442273 GO_REF:0000041 GO_REF:0000107 GO_REF:0000117 NCBI chr34:18,021,047...18,080,993
Ensembl chr34:18,022,353...18,080,903
JBrowse link
G HADH hydroxyacyl-CoA dehydrogenase involved_in ISO
IEA
RGD
Ensembl
TreeGrafter
PMID:17491019 GO_REF:0000107 GO_REF:0000118 RGD:2302227 NCBI chr32:28,460,445...28,506,141
Ensembl chr32:28,460,193...28,531,280
JBrowse link
G HADHA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11390422) UniProt
MGI
InterPro
Ensembl
RGD
PMID:1730633 PMID:11390422 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 GO_REF:0000117 RGD:1600572 NCBI chr17:20,307,207...20,355,659
Ensembl chr17:20,307,226...20,355,508
JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in ISO
IEA
RGD
TreeGrafter
PMID:1730633 GO_REF:0000118 RGD:1600572 NCBI chr17:20,355,778...20,399,869 JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:45,165,272...45,167,683
Ensembl chr  X:45,165,272...45,167,574
JBrowse link
G HSD17B4 hydroxysteroid 17-beta dehydrogenase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17442273) Ensembl
MGI
UniProt
PMID:17442273 GO_REF:0000041 GO_REF:0000107 NCBI chr11:8,717,182...8,810,716
Ensembl chr11:8,717,349...8,824,594
JBrowse link
G LEP leptin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22958918) Ensembl
MGI
PMID:22958918 GO_REF:0000107 NCBI chr14:8,115,396...8,130,946
Ensembl chr14:8,116,122...8,131,395
JBrowse link
G LGALS4 galectin 4 involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:114,281,737...114,300,709
Ensembl chr 1:114,281,803...114,291,209
Ensembl chr 1:114,281,803...114,291,209
JBrowse link
G LOC119869278 lysosomal cobalamin transporter ABCD4 involved_in IEA TreeGrafter GO_REF:0000118
G LOC119876011 delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like involved_in IEA UniProt GO_REF:0000041
G MTLN mitoregulin involved_in IEA Ensembl GO_REF:0000107
G PEX2 peroxisomal biogenesis factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:24,943,563...24,960,834 JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9288097)
(PMID:17442273)
Ensembl
MGI
PMID:9288097 PMID:17442273 GO_REF:0000107 NCBI chr27:37,843,218...37,860,664
Ensembl chr27:37,809,717...37,860,376
JBrowse link
G PEX7 peroxisomal biogenesis factor 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12915479) Ensembl
MGI
PMID:12915479 GO_REF:0000107 NCBI chr 1:29,337,362...29,423,608
Ensembl chr 1:29,337,386...29,418,126
JBrowse link
G PPARD peroxisome proliferator activated receptor delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,492,867...4,579,340
Ensembl chr12:4,492,672...4,579,340
JBrowse link
G SCP2 sterol carrier protein 2 involved_in ISO PMID:9325339 UniProt PMID:9325339 RGD:21201257 NCBI chr 5:55,860,053...55,971,657
Ensembl chr 5:55,860,549...55,964,014
JBrowse link
G SESN2 sestrin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22958918) Ensembl
MGI
PMID:22958918 GO_REF:0000107 NCBI chr 2:72,151,464...72,168,861
Ensembl chr 2:72,151,868...72,168,492
JBrowse link
G SLC25A17 solute carrier family 25 member 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:24,417,294...24,462,057
Ensembl chr10:24,417,155...24,461,964
JBrowse link
G SLC27A2 solute carrier family 27 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:16,155,932...16,196,919
Ensembl chr30:16,156,063...16,196,829
JBrowse link
fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAD11 acyl-CoA dehydrogenase family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:29,537,049...29,645,338
Ensembl chr23:29,538,555...29,645,176
JBrowse link
G ACADL acyl-CoA dehydrogenase long chain involved_in ISO (MGI:3526480|PMID:15639194) BHF-UCL
RGD
PMID:3968063 PMID:15639194 MGI:3526480 RGD:2317678 NCBI chr37:18,028,244...18,073,975
Ensembl chr37:18,017,087...18,073,862
JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain involved_in ISO
IEA
RGD
Ensembl
PMID:3968063 GO_REF:0000107 RGD:2317678 NCBI chr 6:70,852,223...70,881,979
Ensembl chr 6:70,853,061...70,878,668
JBrowse link
G ACADS acyl-CoA dehydrogenase short chain involved_in ISO
IEA
RGD
Ensembl
PMID:3968063 GO_REF:0000107 RGD:2317678 NCBI chr26:16,572,936...16,584,760
Ensembl chr26:16,572,947...16,584,194
JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,189,191...32,194,255
Ensembl chr 5:32,186,502...32,327,990
JBrowse link
G ETFA electron transfer flavoprotein subunit alpha involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr30:39,848,241...39,925,809
Ensembl chr30:39,848,270...39,964,823
JBrowse link
G ETFB electron transfer flavoprotein subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:105,612,791...105,628,125 JBrowse link
G ETFDH electron transfer flavoprotein dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:55,752,170...55,781,118
Ensembl chr15:55,752,200...55,792,105
JBrowse link
G GCDH glutaryl-CoA dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:49,284,341...49,290,456
Ensembl chr20:49,284,425...49,290,849
JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in ISO (PMID:3597357) BHF-UCL PMID:3597357 NCBI chr30:7,584,122...7,594,599
Ensembl chr30:7,584,086...7,594,150
JBrowse link
fatty acid beta-oxidation using acyl-CoA oxidase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOX1 acyl-CoA oxidase 1 involved_in IEA
ISO
TreeGrafter
Ensembl
InterPro
RGD
PMID:1400324 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2299949 NCBI chr 9:4,658,692...4,682,667
Ensembl chr 9:4,658,090...4,679,096
JBrowse link
G ACOX2 acyl-CoA oxidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:32,110,788...32,141,751
Ensembl chr20:32,113,217...32,141,734
JBrowse link
G ACOX3 acyl-CoA oxidase 3, pristanoyl involved_in ISO
IEA
RGD
InterPro
PMID:1400324 PMID:8026493 PMID:8654595 GO_REF:0000002 RGD:2299949 RGD:2299969 RGD:2299971 NCBI chr 3:60,154,012...60,205,696
Ensembl chr 3:60,153,775...60,203,554
JBrowse link
G CRAT carnitine O-acetyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:54,566,708...54,580,301
Ensembl chr 9:54,566,407...54,580,025
JBrowse link
fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADL acyl-CoA dehydrogenase long chain acts_upstream_of_or_within ISO (PMID:21151927) MGI PMID:21151927 NCBI chr37:18,028,244...18,073,975
Ensembl chr37:18,017,087...18,073,862
JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21151927) Ensembl
MGI
PMID:21151927 GO_REF:0000107 NCBI chr 5:32,189,191...32,194,255
Ensembl chr 5:32,186,502...32,327,990
JBrowse link
G ACOT7 acyl-CoA thioesterase 7 acts_upstream_of_or_within ISO (PMID:11834298) MGI PMID:11834298 NCBI chr 5:60,153,616...60,239,254
Ensembl chr 5:60,153,616...60,239,239
JBrowse link
G ACOX1 acyl-CoA oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,658,692...4,682,667
Ensembl chr 9:4,658,090...4,679,096
JBrowse link
G DECR2 2,4-dienoyl-CoA reductase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:40,108,878...40,118,760
Ensembl chr 6:40,111,215...40,115,726
JBrowse link
G ECI2 enoyl-CoA delta isomerase 2 involved_in ISO (PMID:10419495) UniProt PMID:10419495 NCBI chr35:4,349,075...4,368,219
Ensembl chr35:4,342,214...4,366,331
JBrowse link
G FAAH fatty acid amide hydrolase involved_in ISO
IEA
RGD
Ensembl
PMID:12734197 GO_REF:0000107 RGD:1625736 NCBI chr15:14,023,111...14,040,156
Ensembl chr15:14,023,299...14,040,212
JBrowse link
G LEP leptin ISO RGD PMID:12058043 RGD:625499 NCBI chr14:8,115,396...8,130,946
Ensembl chr14:8,116,122...8,131,395
JBrowse link
G LPIN1 lipin 1 involved_in ISO (MGI:3770090|PMID:16950137) UniProt PMID:16950137 MGI:3770090 NCBI chr17:8,348,860...8,480,447
Ensembl chr17:8,348,886...8,478,863
JBrowse link
glucuronate catabolic process to xylulose 5-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1A1 aldo-keto reductase family 1 member A1 involved_in ISO (PMID:38160) MGI PMID:38160 NCBI chr15:14,792,398...14,808,805
Ensembl chr15:14,742,012...14,808,592
JBrowse link
G CRYL1 crystallin lambda 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:17,551,586...17,733,754
Ensembl chr25:17,562,926...17,733,630
JBrowse link
G DCXR dicarbonyl and L-xylulose reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:289,864...291,518
Ensembl chr 9:289,889...291,480
JBrowse link
G SORD sorbitol dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:11,467,259...11,501,166
Ensembl chr30:11,467,253...11,500,641
JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAO1 hydroxyacid oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:14,204,543...14,252,873
Ensembl chr24:14,204,617...14,252,191
JBrowse link
glyoxylate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:50,968,291...50,976,089 JBrowse link
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:73,292,117...73,327,769
Ensembl chr 4:73,292,101...73,327,962
JBrowse link
G HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr28:10,849,037...10,872,238
Ensembl chr28:10,849,046...10,871,853
JBrowse link
lactate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDHD lactate dehydrogenase D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,566,495...75,591,093
Ensembl chr 5:75,587,012...75,591,373
JBrowse link
leukotriene B4 catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC484867 cytochrome P450 4F3 involved_in ISO (PMID:11461919), (PMID:9675028) UniProt PMID:9675028 PMID:11461919 NCBI chr20:46,611,799...46,664,131
Ensembl chr20:46,458,620...46,705,789
JBrowse link
long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:121,545,690...121,564,117
Ensembl chr  X:121,545,586...121,563,186
JBrowse link
G ACADL acyl-CoA dehydrogenase long chain involved_in ISO
IEA
RGD
InterPro
PMID:3968063 GO_REF:0000002 RGD:2317678 NCBI chr37:18,028,244...18,073,975
Ensembl chr37:18,017,087...18,073,862
JBrowse link
G ADTRP androgen dependent TFPI regulating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:11,300,186...11,362,893
Ensembl chr35:11,300,887...11,362,101
JBrowse link
G AIG1 androgen induced 1 involved_in ISO (PMID:27018888) UniProt PMID:27018888 NCBI chr 1:34,643,994...34,884,445
Ensembl chr 1:34,643,764...34,884,119
JBrowse link
G LIPE lipase E, hormone sensitive type acts_upstream_of_or_within ISO (PMID:16804080) MGI PMID:16804080 NCBI chr 1:111,987,862...112,006,492
Ensembl chr 1:111,988,029...112,006,461
JBrowse link
medium-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:52,151,500...52,255,024
Ensembl chr 3:52,151,535...52,249,612
JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain involved_in ISO
IEA
RGD
Ensembl
PMID:3968063 GO_REF:0000107 RGD:2317678 NCBI chr 6:70,852,223...70,881,979
Ensembl chr 6:70,853,061...70,878,668
JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACACB acetyl-CoA carboxylase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:17,763,531...17,895,319
Ensembl chr26:17,747,362...17,894,400
JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193
JBrowse link
G CNR1 cannabinoid receptor 1 ISO RGD PMID:19724020 RGD:2314644 NCBI chr12:47,537,240...47,560,723
Ensembl chr12:47,509,583...47,560,983
JBrowse link
G DBI diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:11485163 RGD:2316274 NCBI chr19:30,640,429...30,645,704
Ensembl chr19:30,640,429...30,646,405
JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5474727|PMID:23209793) ARUK-UCL
Ensembl
PMID:23209793 GO_REF:0000107 MGI:5474727 NCBI chr15:2,966,433...2,979,030
Ensembl chr15:2,966,461...2,978,968
JBrowse link
G PINK1 PTEN induced kinase 1 ISO RGD PMID:25421206 RGD:11560775 NCBI chr 2:78,276,091...78,293,761
Ensembl chr 2:78,277,077...78,294,123
JBrowse link
G PLIN5 perilipin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,181,171...55,189,369
Ensembl chr20:55,181,198...55,189,366
JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ETFBKMT electron transfer flavoprotein subunit beta lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:17,103,168...17,110,405
Ensembl chr27:17,103,210...17,165,828
JBrowse link
phenylacetate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PON3 paraoxonase 3 ISO RGD PMID:12946270 RGD:1303961 NCBI chr14:20,615,180...20,642,807
Ensembl chr14:20,565,641...20,642,985
JBrowse link
positive regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:121,545,690...121,564,117
Ensembl chr  X:121,545,586...121,563,186
JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:14,015,093...14,084,362
Ensembl chr27:14,015,091...14,163,312
JBrowse link
G ACSL5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:14711823 RGD:2312802 NCBI chr28:23,437,838...23,478,763
Ensembl chr28:23,440,387...23,478,762
JBrowse link
G AKT2 AKT serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,359,038...113,407,119
Ensembl chr 1:113,359,575...113,407,131
JBrowse link
G CPT1A carnitine palmitoyltransferase 1A ISO RGD PMID:19302064 RGD:2311346 NCBI chr18:49,136,691...49,190,117
Ensembl chr18:49,136,691...49,190,117
JBrowse link
G FABP1 fatty acid binding protein 1 ISO peroxisomal RGD PMID:16262600 RGD:1626442 NCBI chr17:38,242,119...38,247,969
Ensembl chr17:38,242,119...38,247,962
JBrowse link
G IRS1 insulin receptor substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:39,624,554...39,687,991 JBrowse link
G IRS2 insulin receptor substrate 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:58,197,016...58,229,026
Ensembl chr22:58,223,387...58,227,535
JBrowse link
G MTLN mitoregulin involved_in IEA Ensembl GO_REF:0000107
G PLIN5 perilipin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,181,171...55,189,369
Ensembl chr20:55,181,198...55,189,366
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107
pyruvate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDHA lactate dehydrogenase A involved_in ISO (PMID:8224816)
(PMID:21041631)
MGI PMID:8224816 PMID:21041631 NCBI chr21:40,829,844...40,840,947 JBrowse link
G LDHC lactate dehydrogenase C involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:40,844,644...40,890,407
Ensembl chr21:40,844,662...40,890,398
JBrowse link
G SLC16A1 solute carrier family 16 member 1 involved_in ISO (PMID:29026134) MGI PMID:29026134 NCBI chr17:62,636,600...62,690,491
Ensembl chr17:62,622,902...62,787,481
JBrowse link
G SLC16A3 solute carrier family 16 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:109,557...119,179
Ensembl chr 9:110,345...117,352
JBrowse link
regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB11 ATP binding cassette subfamily B member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:13,742,895...13,835,312
Ensembl chr36:13,746,964...13,834,974
JBrowse link
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:121,545,690...121,564,117
Ensembl chr  X:121,545,586...121,563,186
JBrowse link
G LONP2 lon peptidase 2, peroxisomal involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:66,714,247...66,808,510
Ensembl chr 2:66,714,252...66,808,403
JBrowse link
G MLYCD malonyl-CoA decarboxylase ISO RGD PMID:10516138 RGD:1600797 NCBI chr 5:68,385,058...68,399,965
Ensembl chr 5:68,384,618...68,399,965
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G SAR1A secretion associated Ras related GTPase 1A involved_in ISO (PMID:22002062) UniProt PMID:22002062 NCBI chr 4:21,120,788...21,136,409
Ensembl chr 4:21,123,028...21,136,973
JBrowse link
G TYSND1 trypsin like peroxisomal matrix peptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:21,108,473...21,117,906 JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:7,423,955...7,432,359
Ensembl chr28:7,428,772...7,432,370
JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 involved_in ISO
IEA
RGD
Ensembl
PMID:21138835 GO_REF:0000107 RGD:6771354 NCBI chr17:50,633,397...50,653,882
Ensembl chr17:50,633,413...50,653,894
JBrowse link
G CYP26C1 cytochrome P450, family 26, subfamily C, polypeptide 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:7,416,022...7,424,173 JBrowse link
G CYP2W1 cytochrome P450 family 2 subfamily W member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:15,883,248...15,889,508
Ensembl chr 6:15,881,636...15,889,186
JBrowse link
short-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CES1 carboxylesterase 1 acts_upstream_of_or_within ISO (PMID:16804080) MGI PMID:16804080 NCBI chr 2:60,276,723...60,305,970
Ensembl chr 2:60,236,150...60,321,178
JBrowse link
very long-chain fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOX1 acyl-CoA oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,658,692...4,682,667
Ensembl chr 9:4,658,090...4,679,096
JBrowse link
very long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr  X:121,545,690...121,564,117
Ensembl chr  X:121,545,586...121,563,186
JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:14,015,093...14,084,362
Ensembl chr27:14,015,091...14,163,312
JBrowse link
G ABCD3 ATP binding cassette subfamily D member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,740,704...54,816,854
Ensembl chr 6:54,742,111...54,817,235
JBrowse link
G LOC119869278 lysosomal cobalamin transporter ABCD4 involved_in IEA TreeGrafter GO_REF:0000118
G SLC27A2 solute carrier family 27 member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12719378) Ensembl
MGI
PMID:12719378 GO_REF:0000107 NCBI chr30:16,155,932...16,196,919
Ensembl chr30:16,156,063...16,196,829
JBrowse link
G SLC27A4 solute carrier family 27 member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17522045) Ensembl
MGI
PMID:17522045 GO_REF:0000107 NCBI chr 9:55,164,106...55,177,567
Ensembl chr 9:55,164,817...55,177,511
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17308
    metabolic process 10607
      catabolic process 2527
        cellular catabolic process 1009
          organic acid catabolic process 231
            carboxylic acid catabolic process 231
              monocarboxylic acid catabolic process 121
                (R)-4-hydroxymandelate catabolic process 0
                (R)-mevalonic acid catabolic process 0
                1,6-anhydro-N-acetyl-beta-muramic acid catabolic process 0
                2,4,5-trichlorophenoxyacetic acid catabolic process 0
                2,4-dichlorobenzoate catabolic process 0
                2,4-dichlorophenoxyacetic acid catabolic process 0
                2-dehydro-3-deoxy-D-gluconic acid catabolic process 0
                3,4-dihydroxybenzoate catabolic process + 0
                3-(2,3-dihydroxyphenyl)propanoate catabolic process 0
                3-(3-hydroxy)phenylpropionate catabolic process 0
                3-(3-hydroxyphenyl)propanoate catabolic process 0
                3-hydroxyphenylacetate catabolic process 0
                3-phenylpropionate catabolic process 0
                4-hydroxyphenylacetate catabolic process 0
                4-toluenecarboxylate catabolic process 0
                abscisic acid catabolic process 0
                acetate catabolic process + 0
                aldonic acid catabolic process + 1
                anthranilate catabolic process 0
                benzoate catabolic process + 0
                bile acid catabolic process 0
                biotin catabolic process 0
                cinnamic acid catabolic process 0
                dermatan sulfate catabolic process 5
                ectoine catabolic process 0
                fatty acid catabolic process + 98
                ferulate catabolic process + 0
                formate catabolic process 0
                fumagillin catabolic process 0
                galacturonate catabolic process + 0
                gallate catabolic process + 0
                glucuronate catabolic process + 4
                glycolate catabolic process 1
                glycyrrhetinate catabolic process 0
                glyoxylate catabolic process 3
                homogentisate catabolic process 0
                indoleacetic acid catabolic process 0
                lactate catabolic process + 1
                mandelate catabolic process + 0
                methylgallate catabolic process 0
                nicotinate catabolic process 0
                o-orsellinic acid catabolic process 0
                ochratoxin A catabolic process 0
                p-cumate catabolic process 0
                pantothenate catabolic process 0
                penicillin catabolic process + 0
                pentalenolactone catabolic process 0
                phenylacetate catabolic process 1
                pyruvate catabolic process + 4
                quinate catabolic process 0
                retinoic acid catabolic process 4
                salicylic acid catabolic process 0
                shikimate catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 17308
    cellular process 16207
      cellular metabolic process 8805
        organic acid metabolic process 911
          oxoacid metabolic process 902
            carboxylic acid metabolic process 887
              carboxylic acid catabolic process 231
                monocarboxylic acid catabolic process 121
                  (R)-4-hydroxymandelate catabolic process 0
                  (R)-mevalonic acid catabolic process 0
                  1,6-anhydro-N-acetyl-beta-muramic acid catabolic process 0
                  2,4,5-trichlorophenoxyacetic acid catabolic process 0
                  2,4-dichlorobenzoate catabolic process 0
                  2,4-dichlorophenoxyacetic acid catabolic process 0
                  2-dehydro-3-deoxy-D-gluconic acid catabolic process 0
                  3,4-dihydroxybenzoate catabolic process + 0
                  3-(2,3-dihydroxyphenyl)propanoate catabolic process 0
                  3-(3-hydroxy)phenylpropionate catabolic process 0
                  3-(3-hydroxyphenyl)propanoate catabolic process 0
                  3-hydroxyphenylacetate catabolic process 0
                  3-phenylpropionate catabolic process 0
                  4-hydroxyphenylacetate catabolic process 0
                  4-toluenecarboxylate catabolic process 0
                  abscisic acid catabolic process 0
                  acetate catabolic process + 0
                  aldonic acid catabolic process + 1
                  anthranilate catabolic process 0
                  benzoate catabolic process + 0
                  bile acid catabolic process 0
                  biotin catabolic process 0
                  cinnamic acid catabolic process 0
                  dermatan sulfate catabolic process 5
                  ectoine catabolic process 0
                  fatty acid catabolic process + 98
                  ferulate catabolic process + 0
                  formate catabolic process 0
                  fumagillin catabolic process 0
                  galacturonate catabolic process + 0
                  gallate catabolic process + 0
                  glucuronate catabolic process + 4
                  glycolate catabolic process 1
                  glycyrrhetinate catabolic process 0
                  glyoxylate catabolic process 3
                  homogentisate catabolic process 0
                  indoleacetic acid catabolic process 0
                  lactate catabolic process + 1
                  mandelate catabolic process + 0
                  methylgallate catabolic process 0
                  nicotinate catabolic process 0
                  o-orsellinic acid catabolic process 0
                  ochratoxin A catabolic process 0
                  p-cumate catabolic process 0
                  pantothenate catabolic process 0
                  penicillin catabolic process + 0
                  pentalenolactone catabolic process 0
                  phenylacetate catabolic process 1
                  pyruvate catabolic process + 4
                  quinate catabolic process 0
                  retinoic acid catabolic process 4
                  salicylic acid catabolic process 0
                  shikimate catabolic process 0
paths to the root