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ONTOLOGY REPORT - ANNOTATIONS

Term:metanephric nephron tubule morphogenesis
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Accession:GO:0072282 term browser browse the term
Definition:The process in which the anatomical structures of a metanephric nephron tubule are generated and organized. A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros.


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metanephric nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:15465493) 		Ensembl
RGD		 PMID:15465493 GO_REF:0000107 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:84,210,633...84,213,061 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15465493) RGD PMID:15465493 NCBI chr 5:170,804,511...170,807,988
Ensembl chr 5:170,803,940...170,806,021 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in IEA
ISO 		GO_REF:0000107
(PMID:21523854) 		Ensembl
RGD		 PMID:21523854 GO_REF:0000107 NCBI chr 3:116,901,968...117,004,584
Ensembl chr 3:116,901,968...117,004,153 		JBrowse link
metanephric distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO
IEA 		(PMID:11891195)
GO_REF:0000107 		RGD
Ensembl		 PMID:11891195 GO_REF:0000107 NCBI chr10:14,077,733...14,125,682
Ensembl chr10:14,078,679...14,125,681 		JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:17314325) 		UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:253,555,418...253,645,438 		JBrowse link
G Pax8 paired box 8 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:17314325) 		UniProt
Ensembl
RGD		 PMID:17314325 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:27,584,002...27,640,631 		JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
MGI:98371 (PMID:21212101) 		UniProt
Ensembl
RGD		 PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:15,089,357...15,094,345
Ensembl chr10:15,089,357...15,094,345 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
MGI:98370 (PMID:21212101) 		UniProt
Ensembl
RGD		 PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:98,305,744...98,311,250 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    developmental process 7255
      anatomical structure morphogenesis 3075
        nephron morphogenesis 96
          metanephric nephron morphogenesis 25
            metanephric nephron tubule morphogenesis 8
              epithelial cell migration involved in metanephric nephron tubule morphogenesis + 0
              metanephric distal tubule morphogenesis + 1
              metanephric nephron tubule formation + 4
              metanephric proximal tubule morphogenesis + 0
Path 2
Term Annotations click to browse term
  biological_process 19315
    developmental process 7255
      anatomical structure development 6748
        multicellular organism development 5415
          system development 4702
            renal system development 423
              kidney development 410
                nephron development 191
                  nephron epithelium development 143
                    nephron tubule development 122
                      nephron tubule morphogenesis 92
                        metanephric nephron tubule morphogenesis 8
                          epithelial cell migration involved in metanephric nephron tubule morphogenesis + 0
                          metanephric distal tubule morphogenesis + 1
                          metanephric nephron tubule formation + 4
                          metanephric proximal tubule morphogenesis + 0
paths to the root