Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:metanephric nephron epithelium development
go back to main search page
Accession:GO:0072243 term browser browse the term
Definition:The process whose specific outcome is the progression of the metanephric nephron epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. The metanephric nephron epithelium is a tissue that covers the surface of a nephron in the metanephros.


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
metanephric ascending thin limb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103241369 uncharacterized LOC103241369 involved_in ISO (PMID:12925600) UniProt PMID:12925600 NCBI chr14:8,511,032...8,513,449 JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:1,985,165...2,031,518
Ensembl chr 5:1,983,632...2,015,551
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:36,369,226...36,445,713
Ensembl chr 7:36,369,524...36,443,612
JBrowse link
G POU3F3 POU class 3 homeobox 3 involved_in IEA Ensembl GO_REF:0000107
G UMOD uromodulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:18,620,927...18,641,312
Ensembl chr 5:18,619,895...18,638,719
JBrowse link
metanephric connecting tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB1 calbindin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:85,135,956...85,160,806
Ensembl chr 8:85,137,528...85,160,855
JBrowse link
metanephric DCT cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103241369 uncharacterized LOC103241369 involved_in ISO (PMID:12925600) UniProt PMID:12925600 NCBI chr14:8,511,032...8,513,449 JBrowse link
G POU3F3 POU class 3 homeobox 3 involved_in IEA Ensembl GO_REF:0000107
metanephric descending thin limb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:27,456,553...27,473,196
Ensembl chr21:27,456,259...27,470,728
JBrowse link
metanephric distal convoluted tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB1 calbindin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:85,135,956...85,160,806
Ensembl chr 8:85,137,528...85,160,855
JBrowse link
G LOC103216393 paired box protein Pax-2 involved_in ISO (PMID:17314325) UniProt PMID:17314325 NCBI chr 9:93,763,975...93,847,180 JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:16,236,074...16,299,650
Ensembl chr14:16,233,378...16,297,365
JBrowse link
G UMOD uromodulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:18,620,927...18,641,312
Ensembl chr 5:18,619,895...18,638,719
JBrowse link
metanephric distal tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:36,369,226...36,445,713
Ensembl chr 7:36,369,524...36,443,612
JBrowse link
metanephric distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:1,985,165...2,031,518
Ensembl chr 5:1,983,632...2,015,551
JBrowse link
metanephric glomerular endothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B involved_in ISO (PMID:9693135) UniProt PMID:9693135 NCBI chr19:21,865,792...21,888,068
Ensembl chr19:21,863,768...21,886,395
JBrowse link
metanephric loop of Henle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103241369 uncharacterized LOC103241369 involved_in ISO (PMID:12925600) UniProt PMID:12925600 NCBI chr14:8,511,032...8,513,449 JBrowse link
G POU3F3 POU class 3 homeobox 3 involved_in IEA Ensembl GO_REF:0000107
G WNT7B Wnt family member 7B acts_upstream_of_or_within ISO (PMID:19060336) MGI PMID:19060336 NCBI chr19:28,387,324...28,444,019
Ensembl chr19:28,385,422...28,441,350
JBrowse link
metanephric macula densa development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103241369 uncharacterized LOC103241369 involved_in ISO (PMID:12925600) UniProt PMID:12925600 NCBI chr14:8,511,032...8,513,449 JBrowse link
G POU3F3 POU class 3 homeobox 3 involved_in IEA Ensembl GO_REF:0000107
metanephric nephron tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:88,364,115...88,371,258
Ensembl chr14:88,364,166...88,371,263
JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103216393 paired box protein Pax-2 involved_in ISO (PMID:17314325) UniProt PMID:17314325 NCBI chr 9:93,763,975...93,847,180 JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:16,236,074...16,299,650
Ensembl chr14:16,233,378...16,297,365
JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21212101) Ensembl
MGI
PMID:21212101 GO_REF:0000107 NCBI chr 5:877,988...883,278
Ensembl chr 5:878,217...881,662
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21212101) Ensembl
MGI
PMID:21212101 GO_REF:0000107 NCBI chr16:49,519,749...49,523,967
Ensembl chr16:49,518,185...49,523,898
JBrowse link
metanephric nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:88,220,093...88,222,563
Ensembl chr15:88,220,083...88,223,243
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:129,023,750...129,028,790
Ensembl chr20:129,027,370...129,028,065
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:37,632,748...37,741,100
Ensembl chr 1:37,632,710...37,741,330
JBrowse link
metanephric podocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB2 laminin subunit beta 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16886065) MGI
Ensembl
PMID:16886065 GO_REF:0000107 NCBI chr22:10,523,763...10,535,733
Ensembl chr22:10,523,717...10,536,207
JBrowse link
G NPHS2 NPHS2 stomatin family member, podocin involved_in ISO (PMID:11786407) UniProt PMID:11786407 NCBI chr25:49,786,126...49,804,917 JBrowse link
G NPHS2 NPHS2 stomatin family member, podocin involved_in IEA Ensembl GO_REF:0000107 Ensembl chr25:49,786,517...49,811,374 JBrowse link
metanephric proximal convoluted tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 ISO RGD PMID:7733320 RGD:2326090 NCBI chr 1:99,552,760...99,580,079
Ensembl chr 1:99,552,838...99,579,914
JBrowse link
metanephric proximal convoluted tubule segment 2 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:27,456,553...27,473,196
Ensembl chr21:27,456,259...27,470,728
JBrowse link
metanephric proximal straight tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:27,456,553...27,473,196
Ensembl chr21:27,456,259...27,470,728
JBrowse link
metanephric proximal tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANPEP alanyl aminopeptidase, membrane ISO RGD PMID:30645697 RGD:155631307 NCBI chr29:8,324,094...8,354,491
Ensembl chr29:8,323,797...8,346,581
JBrowse link
G AQP1 aquaporin 1 (Colton blood group) ISO RGD PMID:30645697 RGD:155631307 NCBI chr21:27,456,553...27,473,196
Ensembl chr21:27,456,259...27,470,728
JBrowse link
G LRP2 LDL receptor related protein 2 ISO RGD PMID:30645697 RGD:155631307 NCBI chr10:54,672,876...54,889,374
Ensembl chr10:54,711,517...54,889,208
JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:1,985,165...2,031,518
Ensembl chr 5:1,983,632...2,015,551
JBrowse link
G SLC15A1 solute carrier family 15 member 1 ISO RGD PMID:30645697 RGD:155631307 NCBI chr 3:77,344,653...77,413,475
Ensembl chr 3:77,345,567...77,383,715
JBrowse link
G SLC15A2 solute carrier family 15 member 2 ISO RGD PMID:30645697 RGD:155631307 NCBI chr22:58,916,389...58,966,725
Ensembl chr22:58,913,676...58,966,906
JBrowse link
G SLC22A1 solute carrier family 22 member 1 ISO RGD PMID:30645697 RGD:155631307 NCBI chr13:87,744,600...87,780,846
Ensembl chr13:87,745,023...87,781,073
JBrowse link
G SLC22A6 solute carrier family 22 member 6 ISO RGD PMID:30645697 RGD:155631307 NCBI chr 1:10,918,081...10,926,790
Ensembl chr 1:10,918,770...10,925,983
JBrowse link
G SLC2A5 solute carrier family 2 member 5 ISO RGD PMID:30645697 RGD:155631307 NCBI chr20:122,669,220...122,714,708
Ensembl chr20:122,683,373...122,716,540
JBrowse link
G SLC4A4 solute carrier family 4 member 4 ISO RGD PMID:30645697 RGD:155631307 NCBI chr 7:19,581,399...20,043,334 JBrowse link
metanephric thick ascending limb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103241369 uncharacterized LOC103241369 involved_in ISO (PMID:12925600) UniProt PMID:12925600 NCBI chr14:8,511,032...8,513,449 JBrowse link
G POU3F3 POU class 3 homeobox 3 involved_in IEA Ensembl GO_REF:0000107
G UMOD uromodulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:18,620,927...18,641,312
Ensembl chr 5:18,619,895...18,638,719
JBrowse link
negative regulation of apoptotic process involved in metanephric nephron tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103216393 paired box protein Pax-2 involved_in ISO (PMID:17314325) UniProt PMID:17314325 NCBI chr 9:93,763,975...93,847,180 JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:16,236,074...16,299,650
Ensembl chr14:16,233,378...16,297,365
JBrowse link
positive regulation of metanephric DCT cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103216393 paired box protein Pax-2 involved_in ISO (PMID:17314325) UniProt PMID:17314325 NCBI chr 9:93,763,975...93,847,180 JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:16,236,074...16,299,650
Ensembl chr14:16,233,378...16,297,365
JBrowse link
positive regulation of metanephric podocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADIPOQ adiponectin, C1Q and collagen domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:81,128,427...81,142,779
Ensembl chr15:81,129,795...81,147,391
JBrowse link
regulation of metanephric nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAT4 FAT atypical cadherin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23974041) Ensembl
MGI
PMID:23974041 GO_REF:0000107 NCBI chr 7:72,498,182...72,686,607
Ensembl chr 7:72,500,264...72,685,546
JBrowse link
G LIF LIF interleukin 6 family cytokine involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:13,121,261...13,127,663
Ensembl chr19:13,121,297...13,127,679
JBrowse link
G LOC103216393 paired box protein Pax-2 involved_in ISO (PMID:17314325) UniProt PMID:17314325 NCBI chr 9:93,763,975...93,847,180 JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:16,236,074...16,299,650
Ensembl chr14:16,233,378...16,297,365
JBrowse link
G WWTR1 WW domain containing transcription regulator 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23974041) Ensembl
MGI
PMID:23974041 GO_REF:0000107 NCBI chr15:41,051,827...41,193,266
Ensembl chr15:41,052,614...41,193,268
JBrowse link
G YAP1 Yes1 associated transcriptional regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23974041) MGI
Ensembl
PMID:23974041 GO_REF:0000107 NCBI chr 1:93,479,478...93,605,340
Ensembl chr 1:93,479,135...93,606,808
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19803
    developmental process 6826
      anatomical structure development 6405
        nephron development 191
          nephron epithelium development 146
            metanephric nephron epithelium development 34
              metanephric early distal convoluted tubule development 0
              metanephric glomerular epithelium development + 5
              metanephric late distal convoluted tubule development 0
              metanephric long descending thin limb development + 0
              metanephric macula densa development 2
              metanephric nephron tubule development + 29
              metanephric short descending thin limb development 0
Path 2
Term Annotations click to browse term
  biological_process 19803
    developmental process 6826
      anatomical structure development 6405
        multicellular organism development 5154
          system development 4465
            renal system development 418
              kidney development 404
                kidney epithelium development 181
                  nephron epithelium development 146
                    metanephric nephron epithelium development 34
                      metanephric early distal convoluted tubule development 0
                      metanephric glomerular epithelium development + 5
                      metanephric late distal convoluted tubule development 0
                      metanephric long descending thin limb development + 0
                      metanephric macula densa development 2
                      metanephric nephron tubule development + 29
                      metanephric short descending thin limb development 0
paths to the root