ONTOLOGY REPORT - ANNOTATIONS
Term: metanephric nephron development
Accession: GO:0072210
browse the term
Definition: The process whose specific outcome is the progression of a nephron in the metanephros over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.
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Foxd1
forkhead box D1
IEA ISO
GO_REF:0000107 (MGI:3525902|PMID:15634693)
Ensembl RGD
PMID:15634693
GO_REF:0000107 MGI:3525902
NCBI chr 2:28,460,068...28,462,488
Ensembl chr 2:28,460,068...28,462,488
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Tfap2a
transcription factor AP-2 alpha
ISO
(PMID:7555706)
RGD
PMID:7555706
NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
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Tfap2b
transcription factor AP-2 beta
ISO
(PMID:7555706)
RGD
PMID:7555706
NCBI chr 9:25,410,669...25,440,568
Ensembl chr 9:25,410,669...25,440,411
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Wnt4
Wnt family member 4
ISO
MGI:1857453 (MGI:3784679|PMID:18346943)
RGD
PMID:18346943
MGI:3784679
NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
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Sall1
spalt-like transcription factor 1
ISO
MGI:3603818 (MGI:5563280|PMID:24550112)
RGD
PMID:24550112
MGI:5563280
NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
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Smo
smoothened, frizzled class receptor
IEA ISO ISS
GO_REF:0000107 (MGI:3611729|PMID:16396903) GO_REF:0000024
Ensembl RGD UniProt
PMID:16396903
GO_REF:0000024 GO_REF:0000107 MGI:3611729
NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
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Bmp4
bone morphogenetic protein 4
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:10706139)
Ensembl UniProt RGD
PMID:10706139
GO_REF:0000024 GO_REF:0000107
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
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Gdnf
glial cell derived neurotrophic factor
IDA ISO IEA
PMID:17522159 (PMID:10322633) GO_REF:0000107
RGD Ensembl
PMID:10322633 , PMID:17522159
GO_REF:0000107, RGD:8656002
NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
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Grem1
gremlin 1, DAN family BMP antagonist
ISO
(MGI:3714585|PMID:17522159)
RGD
PMID:17522159
MGI:3714585
NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
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Pax2
paired box 2
ISO ISS
(PMID:10322633) GO_REF:0000024
RGD UniProt
PMID:10322633
GO_REF:0000024
NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
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Pax8
paired box 8
ISO
(PMID:8861958)
RGD
PMID:8861958
NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
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Sall1
spalt-like transcription factor 1
ISO
(PMID:11511981) (MGI:2149437|PMID:11688560)
RGD
PMID:11511981 PMID:11688560
MGI:2149437
NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
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Six2
SIX homeobox 2
ISO
(PMID:10322633)
RGD
PMID:10322633
NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
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Lhx1
LIM homeobox 1
IEP
PMID:9496787
UniProt
PMID:9496787
RGD:8553921
NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
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Pax8
paired box 8
ISO
(PMID:1337742)
RGD
PMID:1337742
NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
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Pdgfrb
platelet derived growth factor receptor beta
IEP
PMID:10734101
UniProt
PMID:10734101
RGD:8554631
NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
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Wt1
WT1 transcription factor
ISO
(PMID:18618131)
RGD
PMID:18618131
NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
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Pkd1
polycystin 1, transient receptor potential channel interacting
ISO
(PMID:11891195)
RGD
PMID:11891195
NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
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Lamb2
laminin subunit beta 2
IEA ISO
GO_REF:0000107 MGI:2138070 (MGI:3664526|PMID:16886065), (MGI:75217|PMID:7670489)
Ensembl RGD
PMID:7670489 PMID:16886065
GO_REF:0000107 MGI:3664526 MGI:75217
NCBI chr 8:117,268,335...117,280,517
Ensembl chr 8:117,268,337...117,280,517
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Pdgfra
platelet derived growth factor receptor alpha
IEA ISO ISS
GO_REF:0000107 UniProtKB:P05622 (MGI:1931346|PMID:11239463) GO_REF:0000024
Ensembl RGD UniProt
PMID:11239463
GO_REF:0000024 GO_REF:0000107 MGI:1931346
NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
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Pdgfrb
platelet derived growth factor receptor beta
ISS ISO
GO_REF:0000024 UniProtKB:P26618 (MGI:1931346|PMID:11239463)
UniProt RGD
PMID:11239463
GO_REF:0000024 MGI:1931346
NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
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Tcf21
transcription factor 21
ISS ISO
GO_REF:0000024 (MGI:2651771|PMID:12619136)
UniProt RGD
PMID:12619136
GO_REF:0000024 MGI:2651771
NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
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Pdgfb
platelet derived growth factor subunit B
ISO
(PMID:9693135)
RGD
PMID:9693135
NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
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Pdgfb
platelet derived growth factor subunit B
ISS ISO
GO_REF:0000024 (MGI:3039044|PMID:15084468)
UniProt RGD
PMID:15084468
GO_REF:0000024 MGI:3039044
NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
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Cd34
CD34 molecule
ISO
(PMID:1868864)
RGD
PMID:1868864
NCBI chr13:113,691,842...113,711,259
Ensembl chr13:113,691,932...113,711,647
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Pdgfb
platelet derived growth factor subunit B
ISO
(MGI:1289803|PMID:9693135)
RGD
PMID:9693135
MGI:1289803
NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
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Pdgfrb
platelet derived growth factor receptor beta
ISS ISO
GO_REF:0000024 (MGI:1289803|PMID:9693135)
UniProt RGD
PMID:9693135
GO_REF:0000024 MGI:1289803
NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
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Pdgfrb
platelet derived growth factor receptor beta
ISO
(PMID:9693135)
RGD
PMID:9693135
NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
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Lamb2
laminin subunit beta 2
IEA ISO
GO_REF:0000107 MGI:2138070 (MGI:3664526|PMID:16886065)
Ensembl RGD
PMID:16886065
GO_REF:0000107 MGI:3664526
NCBI chr 8:117,268,335...117,280,517
Ensembl chr 8:117,268,337...117,280,517
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Nphs2
NPHS2 stomatin family member, podocin
ISO
(PMID:11786407)
RGD
PMID:11786407
NCBI chr13:73,929,136...73,941,522
Ensembl chr13:73,929,136...73,941,522
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Lgr4
leucine-rich repeat-containing G protein-coupled receptor 4
ISO
(MGI:5006869|PMID:21523854)
RGD
PMID:21523854
MGI:5006869
NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
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Lhx1
LIM homeobox 1
IEP
PMID:9496787
UniProt
PMID:9496787
RGD:8553921
NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
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Pdgfrb
platelet derived growth factor receptor beta
IEP
PMID:10734101
UniProt
PMID:10734101
RGD:8554631
NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
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Aqp1
aquaporin 1
ISO
(PMID:18618131)
RGD
PMID:18618131
NCBI chr 4:85,551,503...85,563,683
Ensembl chr 4:85,551,502...85,569,360
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Osr1
odd-skipped related transcription factor 1
ISS ISO
GO_REF:0000024 (MGI:3826342|PMID:18835385)
UniProt RGD
PMID:18835385
GO_REF:0000024 MGI:3826342
NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
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Wnt4
Wnt family member 4
IEA ISO
GO_REF:0000107 MGI:4399122 (MGI:4398804|PMID:19830824)
Ensembl RGD
PMID:19830824
GO_REF:0000107 MGI:4398804
NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
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Pax2
paired box 2
ISS ISO
GO_REF:0000024 (MGI:3704067|PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024 MGI:3704067
NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
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Pax8
paired box 8
ISS ISO
GO_REF:0000024 (MGI:3704067|PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024 MGI:3704067
NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
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Sox8
SRY-box transcription factor 8
ISS ISO
GO_REF:0000024 MGI:98371 (MGI:4939090|PMID:21212101)
UniProt RGD
PMID:21212101
GO_REF:0000024 MGI:4939090
NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
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Sox9
SRY-box transcription factor 9
ISS ISO
GO_REF:0000024 MGI:98370 (MGI:4939090|PMID:21212101)
UniProt RGD
PMID:21212101
GO_REF:0000024 MGI:4939090
NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
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Hes1
hes family bHLH transcription factor 1
IEA ISO
GO_REF:0000107 (PMID:15465493)
Ensembl RGD
PMID:15465493
GO_REF:0000107
NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
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Hes5
hes family bHLH transcription factor 5
ISO
(PMID:15465493)
RGD
PMID:15465493
NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188
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Lgr4
leucine-rich repeat-containing G protein-coupled receptor 4
ISO
(MGI:5006869|PMID:21523854)
RGD
PMID:21523854
MGI:5006869
NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
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Lhx1
LIM homeobox 1
ISO
(PMID:7909549)
RGD
PMID:7909549
NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
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Lhx1
LIM homeobox 1
IEP ISO
PMID:9496787 (PMID:7909549)
RGD
PMID:7909549 , PMID:9496787
RGD:8553921
NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
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Pax8
paired box 8
ISO
(PMID:1337742)
RGD
PMID:1337742
NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
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Pdgfrb
platelet derived growth factor receptor beta
IEP
PMID:10734101
UniProt
PMID:10734101
RGD:8554631
NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
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Pkd2
polycystin 2, transient receptor potential cation channel
ISO
(PMID:11891195)
RGD
PMID:11891195
NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
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Wt1
WT1 transcription factor
ISO ISS
UniProtKB:P22561 (PMID:10101119) (MGI:1333093|PMID:10101119), (PMID:18618131) GO_REF:0000024
RGD UniProt
PMID:10101119 PMID:18618131
GO_REF:0000024 MGI:1333093
NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
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Pax2
paired box 2
ISS ISO
GO_REF:0000024 (MGI:3704067|PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024 MGI:3704067
NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
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Pax8
paired box 8
ISS ISO
GO_REF:0000024 (MGI:3704067|PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024 MGI:3704067
NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
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Cited1
Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
IMP
PMID:15843474
UniProt
PMID:15843474
RGD:8554075
NCBI chr X:72,128,996...72,133,692
Ensembl chr X:72,128,994...72,133,692
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Ctnnb1
catenin beta 1
IEA ISO
GO_REF:0000107 (MGI:3714576|PMID:17537789)
Ensembl RGD
PMID:17537789
GO_REF:0000107 MGI:3714576
NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
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Sall1
spalt-like transcription factor 1
ISO
MGI:3603818 (MGI:5563280|PMID:24550112)
RGD
PMID:24550112
MGI:5563280
NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
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Bmp4
bone morphogenetic protein 4
IEA ISO ISS
GO_REF:0000107 (PMID:12141440) GO_REF:0000024
Ensembl RGD UniProt
PMID:12141440
GO_REF:0000024 GO_REF:0000107
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
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Wt1
WT1 transcription factor
ISS ISO
GO_REF:0000024 (MGI:1332959|PMID:10077614)
UniProt RGD
PMID:10077614
GO_REF:0000024 MGI:1332959
NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
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Bmp4
bone morphogenetic protein 4
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:12141440)
Ensembl UniProt RGD
PMID:12141440
GO_REF:0000024 GO_REF:0000107
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
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Egr1
early growth response 1
IMP
PMID:8910451
UniProt
PMID:8910451
RGD:8553929
NCBI chr18:27,657,903...27,660,101
Ensembl chr18:27,657,628...27,661,429
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Gdnf
glial cell derived neurotrophic factor
IEA ISO
GO_REF:0000107 (MGI:81286|PMID:8657306)
Ensembl RGD
PMID:8657306
GO_REF:0000107 MGI:81286
NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
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Lif
LIF, interleukin 6 family cytokine
ISO IEA
(PMID:20624457) GO_REF:0000107
RGD Ensembl
PMID:20624457
GO_REF:0000107
NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
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Pax2
paired box 2
ISS ISO
GO_REF:0000024 UniProtKB:Q00288 (MGI:2445273|PMID:12435636)
UniProt RGD
PMID:12435636
GO_REF:0000024 MGI:2445273
NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
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Pax8
paired box 8
ISS ISO
GO_REF:0000024 (MGI:2445273|PMID:12435636)
UniProt RGD
PMID:12435636
GO_REF:0000024 MGI:2445273
NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
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Adipoq
adiponectin, C1Q and collagen domain containing
ISS ISO
GO_REF:0000024 (MGI:3795840|PMID:18431508)
UniProt RGD
PMID:18431508
GO_REF:0000024 MGI:3795840
NCBI chr11:81,330,845...81,344,488
Ensembl chr11:81,330,293...81,344,488
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Agtr2
angiotensin II receptor, type 2
ISO
(MGI:3808848|PMID:18607644)
RGD
PMID:18607644
MGI:3808848
NCBI chr X:119,389,480...119,393,845
Ensembl chr X:119,390,013...119,393,842
G
Pax2
paired box 2
ISS ISO
GO_REF:0000024 (MGI:3697544|PMID:17047028)
UniProt RGD
PMID:17047028
GO_REF:0000024 MGI:3697544
NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
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Ret
ret proto-oncogene
ISO
(MGI:3697544|PMID:17047028)
RGD
PMID:17047028
MGI:3697544
NCBI chr 4:150,202,170...150,249,196
Ensembl chr 4:150,202,058...150,244,372
G
Irx1
iroquois homeobox 1
ISO
(PMID:17875669)
RGD
PMID:17875669
NCBI chr 1:33,910,912...33,916,741
Ensembl chr 1:33,910,912...33,916,741
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Irx2
iroquois homeobox 2
ISO
(PMID:17875669)
RGD
PMID:17875669
NCBI chr 1:33,270,388...33,275,868
Ensembl chr 1:33,271,977...33,275,540
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Wnt9b
Wnt family member 9B
ISO
MGI:3526437 (MGI:3588895|PMID:16054034)
RGD
PMID:16054034
MGI:3588895
NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
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Fmn1
formin 1
ISO
(MGI:65439|PMID:7517224)
RGD
PMID:7517224
MGI:65439
NCBI chr 3:104,783,093...105,170,761
Ensembl chr 3:104,816,987...105,086,436
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Kif26b
kinesin family member 26B
ISO
MGI:4459557 (MGI:4454194|PMID:20439720)
RGD
PMID:20439720
MGI:4454194
NCBI chr13:96,775,356...97,173,469
Ensembl chr13:96,775,357...97,173,469
G
Sall1
spalt-like transcription factor 1
ISO
MGI:2388379 (MGI:2149437|PMID:11688560), (MGI:3665498|PMID:16839447)
RGD
PMID:11688560 PMID:16839447
MGI:2149437 MGI:3665498
NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
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