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ONTOLOGY REPORT - ANNOTATIONS

Term:ureter development
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Accession:GO:0072189 term browser browse the term
Definition:The process whose specific outcome is the progression of the ureter over time, from its formation to the mature structure. The ureter is a muscular tube that transports urine from the kidney to the urinary bladder or from the Malpighian tubule to the hindgut.


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ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXF1 forkhead box F1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:2,579,348...2,598,122
Ensembl chr 6:2,592,993...2,597,659 		JBrowse link
G NFIA nuclear factor I A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17530927) Ensembl
MGI		 PMID:17530927 GO_REF:0000107 NCBI chr 6:150,834,002...151,229,773
Ensembl chr 6:150,835,494...151,426,749 		JBrowse link
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:73,843,770...73,901,020
Ensembl chr13:73,858,427...73,900,967 		JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:3833510|PMID:17881463) UniProt PMID:17881463 MGI:3833510 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,823,308...111,913,969 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:76,854,218...76,857,143
Ensembl chr 4:76,854,150...76,857,148 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20881014) Ensembl
MGI		 PMID:20881014 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G TBX18 T-box transcription factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20881014) Ensembl
MGI		 PMID:20881014 GO_REF:0000107 NCBI chr 1:53,836,939...53,867,460
Ensembl chr 1:53,838,189...53,867,254 		JBrowse link
mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:20110314) Ensembl
MGI		 PMID:20110314 GO_REF:0000107 NCBI chr 1:189,620,430...189,624,652
Ensembl chr 1:189,619,855...189,624,651 		JBrowse link
G TBX18 T-box transcription factor 18 acts_upstream_of ISO (PMID:20110314) MGI PMID:20110314 NCBI chr 1:53,836,939...53,867,460
Ensembl chr 1:53,838,189...53,867,254 		JBrowse link
negative regulation of mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
positive regulation of mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20110314) Ensembl
MGI		 PMID:20110314 GO_REF:0000107 NCBI chr 1:189,620,430...189,624,652
Ensembl chr 1:189,619,855...189,624,651 		JBrowse link
G TBX18 T-box transcription factor 18 acts_upstream_of_or_within ISO (PMID:20110314) MGI PMID:20110314 NCBI chr 1:53,836,939...53,867,460
Ensembl chr 1:53,838,189...53,867,254 		JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
ureter maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21521737) Ensembl
MGI		 PMID:21521737 GO_REF:0000107 NCBI chr 1:113,932,722...114,037,059
Ensembl chr 1:113,932,739...114,037,046 		JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21521737) Ensembl
MGI		 PMID:21521737 GO_REF:0000107 NCBI chr10:63,367,684...63,397,977
Ensembl chr10:63,367,663...63,388,859 		JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:3833510|PMID:17881463) UniProt PMID:17881463 MGI:3833510 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,823,308...111,913,969 		JBrowse link
G RET ret proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21521737) Ensembl
MGI		 PMID:21521737 GO_REF:0000107 NCBI chr14:61,305,818...61,361,416
Ensembl chr14:61,305,841...61,361,412 		JBrowse link
ureter morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G EMX2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21731775) Ensembl
MGI		 PMID:21731775 GO_REF:0000107 NCBI chr14:127,649,675...127,656,972
Ensembl chr14:127,650,688...127,655,706 		JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21731775) Ensembl
MGI		 PMID:21731775 GO_REF:0000107 NCBI chr10:63,367,684...63,397,977
Ensembl chr10:63,367,663...63,388,859 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21731775) Ensembl
MGI		 PMID:21731775 GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G LZTS2 leucine zipper tumor suppressor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21949185) Ensembl
MGI		 PMID:21949185 GO_REF:0000107 NCBI chr14:112,078,211...112,088,484
Ensembl chr14:112,078,517...112,088,443 		JBrowse link
G MECOM MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (PMID:21731775) MGI PMID:21731775 NCBI chr13:107,753,207...108,336,136
Ensembl chr13:107,754,482...108,335,702 		JBrowse link
G PAX2 paired box 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:48612|PMID:1723950)
(PMID:21731775)		 UniProt
MGI		 PMID:1723950 PMID:21731775 MGI:48612 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,823,308...111,913,969 		JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21212101) Ensembl
MGI		 PMID:21212101 GO_REF:0000107 NCBI chr 3:40,825,151...40,830,085
Ensembl chr 3:40,825,157...40,830,736 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21212101) Ensembl
MGI		 PMID:21212101 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20110314) Ensembl
MGI		 PMID:20110314 GO_REF:0000107 NCBI chr 1:189,620,430...189,624,652
Ensembl chr 1:189,619,855...189,624,651 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20881014) Ensembl
MGI		 PMID:20881014 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) UniProt PMID:18776146 MGI:3806378 NCBI chr 6:41,345,466...41,429,239
Ensembl chr 6:41,345,470...41,423,700 		JBrowse link
ureter urothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,757,920...118,765,102 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17799
    multicellular organismal process 8688
      multicellular organism development 5105
        tube development 1306
          ureter development 20
            mesenchymal cell proliferation involved in ureter development + 4
            ureter maturation 4
            ureter morphogenesis + 9
            ureter smooth muscle development + 4
            ureter urothelium development + 2
Path 2
Term Annotations click to browse term
  biological_process 17799
    developmental process 6719
      anatomical structure development 6314
        multicellular organism development 5105
          system development 4453
            renal system development 410
              ureter development 20
                mesenchymal cell proliferation involved in ureter development + 4
                ureter maturation 4
                ureter morphogenesis + 9
                ureter smooth muscle development + 4
                ureter urothelium development + 2
paths to the root